Elements of a State Water
Monitoring and Assessment
Program

March 2003

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       Elements of a State Water
Monitoring and Assessment Program

               March 2003
    Assessment and Watershed Protection Division
      Office of Wetlands, Oceans and Watershed
       U.S. Environmental Protection Agency
               EPA841-B-03-003
              Available on the web at
       http://www.epa.gov/owow/monitoring/repguid.html

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               Elements of a State Water
         Monitoring and Assessment Program
EPA and States need comprehensive water quality monitoring and
assessment information on environmental conditions and changes
over time to help set levels of protection in water quality standards
and to identify problem areas that are emerging or that need
additional regulatory and non-regulatory actions to support water
quality management decisions such as TMDLs, NPDES permits,
enforcement, and nonpoint source  management. This information
also informs EPA and State decisionmakers, the Congress, the
public, and other stakeholders of the progress that the Agency and
State partners are making in protecting human health and the
environment.  Without this information, it is difficult for EPA and
the States to set priorities, evaluate the success of programs and
activities, and report on accomplishments in a  credible and
informed way (U.S. GAO 2000).

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                                 Contents

Transmittal Memorandum 	ii

Executive Summary	v

I.    Introduction	1
     A.   Background	1
     B.   Purpose  	2
     C.   References	2

II.   Elements of a State Monitoring Program	4
     A.   Monitoring Program Strategy  	4
     B.   Monitoring Objectives	4
     C.   Monitoring Design	6
     D.   Core and Supplemental Water Quality Indicators	7
     E.   Quality Assurance	7
     F.   Data Management	9
     G.   Data Analysis/Assessment	10
     H.   Reporting	11
     I.   Programmatic Evaluation  	12
     J.   General Support and Infrastructure Planning	12
     K.   References	13

Cover photos courtesy of USDA NRCS
                                          -i-

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    MORANDIJM
               Diane C. Regas. Director  x	 ,,.  ;••<: •'--••••;'
               OR ice of Wetlands, Oceans and Watersheds

               jarnt;i> A. Hanlon, Director
               Office ol'Wastcv/ater Manage
                                             /
 T (}:           W a le r \ 1 a nage i n e nl Division O i re c i o r s, Regions 1 -1 ()
               Regional Science and Technology Division Directors,  Regions 1-10


   The Clean Water Act [CWA] gives States and Territories the primary responsibility for
implementing programs to protect and restore water quality, including monitoring and assessing
the nation's waters and reporting on their quality. CWA Section 106(e)(l) requires the
Environmental Protection Agency (EPA) to determine that a State is monitoring the quality of
navigable waters, compiling, and analyzing data on water quality and including it in the State's
Section 305(b) report prior to the award of Section 106 grant funds. The attached document,
Elements of a State Water Monitoring and Assessment Program, recommends the basic elements
of a State water monitoring program and serves as a tool to help EPA and the States determine
whether a monitoring program meets the prerequisites of CWA Section 106(e)(l).

    It is not EPA's intent to use the Elements document to withhold a State's  Section 106 grant
funds, but rather to encourage a long term process of incremental improvement in monitoring
programs, as needed.  The Elements document is intended to provide a  framework for States to
clearly articulate their programmatic and resource needs and a reasonable time line for meeting
those needs. EPA expects this effort will identify efficiencies to be gained through a holistic
approach to program implementation.

                                           -ii-

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   For the Fiscal Year (FY) 2004 grant award, a State should, in addition to continuing to submit
reports under Section 305(b) and annual data updates, have a monitoring program strategy1 in
place or commit to complete development of such a strategy.  This strategy will be State specific,
building on the State's existing monitoring capabilities, but will describe how the monitoring
program will serve all water quality management needs and address all State waters over time.
The monitoring program strategy is a long-term implementation plan and should include a
timeline, not to exceed ten years2, for completing implementation of the strategy.  It is important
that the strategy be comprehensive in scope and identify the technical issues and resource needs
that are currently impediments to an adequate monitoring program.

     States should begin implementation of the strategies upon receipt of the subsequent award
of a  Section 106 grant or Performance Partnership Grant that includes Section 106 funds.
Beginning with the FY2005 Section 106 grant cycle, activities from a State's strategy needed to
upgrade its monitoring program should be incorporated into work plans for Section 106 grants
and Performance Partnership Grants (PPGs) that include Section 106 funds, consistent with the
regulations governing the negotiation of work plans at 40 CFR 35.107. The State must continue
to submit reports under Section 305(b) and annual data updates.

     The EPA Region, in conjunction with the State, will review the State's monitoring program
to determine whether progress has been adequate and reflects commitments negotiated in work
plans for Section 106 grants or Performance Partnership Grants (PPGs) that include Section 106
funds.  This evaluation will take into consideration the effects of funding shortfalls on a State's
implementation of its monitoring program strategy. EPA Headquarters will collaborate with the
EPA Regional offices to assess overall State progress from a national perspective.

     If you have any questions, please contact Charles Sutfm, Director, Assessment and
Watershed Protection Division at 202-566-1155, or Margarete Heber, Chief, Monitoring Branch
at 202-566-1189.

Attachment

cc:  Regional Monitoring/305(b) coordinators
     Regional TMDL coordinators
     Regional 106 coordinators
     Tracy Mehan-AA, Office of Water
     Paul Gilman-AA, Office of Research and Development
     Mike Shapiro-OW
     Ben Grumbles-OW
     Geoffrey Grubbs-OST
     Cynthia Dougherty-OGWDW
        see Section II, Part A, "Monitoring Program Strategy,"of this Elements document

       2i.e., no later than the end of FY2014
                                           -111-

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Susan Lepow-OGC
George Alapas-NCEA
Peter Preuss-NCER
Gary Foley-NERL
Lawrence Reiter-NHEERL
Timothy Oppelt-NRMRL
Jane Ephrimedes- OWM
Carol Crow - OWM
Leslie Darman - OGC
Susmita Dubey - OGC
Suzanne Schwartz- OCPD
John Meagher- Wetlands Division
Doreen Vetter- Wetlands Division
Mike McDonald- ORD/EMAP
Barbara Brown-ORD/Narragansett
Gil Veith- ORD/Duluth
Jennifer Orme-Zavaletta-ORD/Corvallis
Steve Paulsen-ORD/Corvallis
Association of State and Interstate Water Pollution Control Administrators
Environmental Council of the States
                                   -IV-

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                                  Executive Summary

Clean Water Act §106(e)(l) and 40 CFR Part 35.168(a) provide that EPA award Section 106
funds to a State only if the State has provided for, or is carrying out as part of its program, the
establishment and operation of appropriate devices, methods, systems, and procedures necessary
to monitor and to compile and analyze data on the quality of navigable waters in the State3, and
provision for annually updating the data and including it in the Section 305(b) report.4  This
document recommends the basic elements of a State water monitoring program and serves as a
tool to help EPA and the States determine whether a monitoring program meets the prerequisites
of CWA Section 106(e)(l).

Because these elements have not been clearly defined in the past, there is a lot of variability in
existing State programs. EPA expects that State water monitoring programs will evolve over the
next 10 years so that ultimately all States will have a common foundation of water quality
monitoring programs that support State decision needs.  EPA expects that most States will
employ an iterative process to fully implement a monitoring program that reflects the elements
described in this document, and will work with States to identify annual monitoring milestones.

States should develop, over time, a monitoring program addressing the 10 elements summarized
below and described in greater detail in the full text of this document.  The first of these elements
is a long-term state monitoring strategy.  This strategy will be State specific, be designed from
the monitoring capabilities each State already has, and should include a timeline not to exceed 10
years to complete  implementation. EPA believes that state monitoring programs can be upgraded
to include all of the elements described below within the next 10 years.

For the FY2004 grant award, a State, in addition to continuing to submit reports under Section
305(b) and annual data updates, should have a monitoring program strategy5 in place or commit
to complete development of such a strategy.  Beginning with the FY2005 Section 106 grant
cycle, activities from a State's strategy needed to upgrade its monitoring program should be
incorporated into work plans for Section 106 grants and Performance Partnership Grants (PPGs)
that include Section 106 funds, consistent with the regulations governing the negotiation of work
plans at 40 CFR 35.107.  The State must continue to submit reports under Section 305(b) and
annual data.  EPA expects that the State will have fully implemented its strategy by 2014.
        The term "State waters" is used in this document to refer to navigable waters as defined under Section 502
of the Clean Water Act.

        This document uses the term "State" to refer to States, the District of Columbia and Territories, as defined
under Section 502 of the Clean Water Act. Under the CWA and EPA's implementing regulations this requirement
applies only to States and not to Interstate Agencies or Tribes (40 CFR §§ 35.168(b), 35.588 ).  However, non-State
recipients of 106 funds may be required to submit monitoring reports pursuant to the grant. EPA encourages these
recipients to follow the recommendations of this guidance to the extent practicable.

        see Section II, Part A, "Monitoring Program Strategy," of this Elements document

                                            -V-

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The recommended 10 elements of a state water monitoring and assessment program are:

A. Monitoring Program Strategy
The State has a comprehensive monitoring program strategy that serves its water quality
management needs and addresses all State waters, including streams, rivers, lakes, the Great
Lakes, reservoirs, estuaries, coastal areas, wetlands, and groundwater. The  strategy should
contain or reference a description of how the State plans to address each of the remaining nine
elements. The monitoring program strategy is a long-term implementation plan and should
include a timeline, not to exceed ten years6, for completing implementation of the strategy.
EPA believes that state monitoring programs can be upgraded to include all of the elements
described below within the next 10 years. It is important that the strategy be comprehensive in
scope and identify the technical issues and resource needs that are currently impediments to an
adequate monitoring program.

B. Monitoring Objectives
The State has identified monitoring objectives critical to the design of a monitoring program that
is efficient and effective in generating data that serve management decision needs. EPA expects
the State to develop a strategy and implement a monitoring program that reflects a full range of
State water quality management objectives including, but not  limited to, Clean Water Act goals.
For example, monitoring objectives could include helping establish water quality standards,
determining water quality status and trends, identifying impaired waters, identifying causes and
sources of water quality problems, implementing water quality management programs, and
evaluating program effectiveness. Consistent with the Clean Water Act, monitoring objectives
should reflect the decision needs relevant to all types of State waters.

C. Monitoring Design
The State has an approach and rationale for selection of monitoring designs  and sample sites that
best serve its monitoring objectives. The State monitoring program will likely integrate several
monitoring designs (e.g., fixed station, intensive and screening-level monitoring, rotating basin,
judgmental and probability design) to meet the full range of decision needs.  The State
monitoring design  should include a probability-based network for making statistically valid
inferences about the condition of all State water types, over time. EPA expects the State to use
the most efficient combination of monitoring designs to meet its objectives.
       6i.e., no later than the end of FY2014
                                           -VI-

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D. Core and Supplemental Water Quality Indicators
The State uses a tiered approach to monitoring that includes core indicators selected to represent
each applicable designated use, plus supplemental indicators selected according to site-specific
or project-specific decision criteria.  Core indicators for each water resource type include
physical/habitat, chemical/toxicological, and biological/ecological endpoints as appropriate, and
can be used routinely to assess attainment with applicable water quality standards throughout the
State.  Supplemental indicators are used when there is a reasonable expectation that a specific
pollutant may be present in a watershed, when core indicators indicate impairment, or to support
a special study such as screening for potential pollutants of concern.

E. Quality Assurance
Quality management plans and quality assurance program/project plans are established,
maintained, and peer reviewed in accordance with EPA policy to ensure the scientific validity of
monitoring and laboratory activities, and to ensure that State reporting requirements are met.

F. Data Management
The State uses an accessible electronic data system for water quality, fish tissue, toxicity,
sediment chemistry, habitat, biological data, with timely data entry (following appropriate
metadata and State/Federal geo-locational standards) and public access.  In the future, EPA will
require all States to directly or indirectly make their monitoring data available through the new
STORET system. For States that do not currently operate STORET, their monitoring strategies
should provide for use of STORET as soon as is practicable. For the 2004  305(b) reports and
303(d) lists, EPA strongly recommends that all States store  assessment information using the
EPA Assessment Database or an equivalent relational database and define  the geographic
location of assessment units using the National Hydrography Dataset (NHD).

G. Data Analysis/Assessment
The State has a methodology for assessing attainment of water quality standards based on
analysis of various types of data (chemical, physical, biological, land use) from various sources,
for all waterbody types and all State waters. The methodology includes criteria for compiling,
analyzing, and integrating all readily available and existing information (e.g., volunteer
monitoring data, discharge monitoring reports).

H. Reporting
The State produces timely and complete water quality reports and lists called for under Sections
305(b), 303(d), 314, and 319 of the Clean Water Act and Section 406 of the Beaches Act. EPA
issued  "2002 Integrated Water Quality Monitoring and Assessment Report Guidance " on
November 19, 2001, to encourage integration  and consistency in the development and
submission of Section  305(b) water quality reports and Section 303(d) impaired waters lists.
EPA will continue to support the use of this integrated reporting framework for future reporting
cycles.

Under  current regulations, Section 303(d) lists and Section 305(b) reports are due no later than
                                           -Vll-

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April 1 of even-numbered years. To remain eligible for Section 106 grants, the State also must
submit annual updates of water quality information. This requirement may be satisfied by
annually updating 305(b) assessment information or by annually uploading monitoring data to
the national STORET warehouse.

/. Programmatic Evaluation
The State, in consultation with its EPA Region, conducts periodic reviews of each aspect of its
monitoring program to determine how well the program serves its water quality decision needs
for all State waters, including all waterbody types.  This should involve evaluating the
monitoring program to determine how well each of the elements is addressed and determining
how needed changes and additions are incorporated into future monitoring cycles.

J.  General Support and Infrastructure Planning
The State identifies current and future resource needs it requires to fully implement its
monitoring program strategy. This needs assessment should describe funding,  staff, training,
laboratory resources, and upcoming improvements.
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I.   Introduction

A. Background

Clean Water Act §106(e)(l) requires EPA, prior to awarding a Section 106 grant to a State, to
determine that the State is monitoring the quality of navigable waters, compiling and analyzing
data on the water quality, and including those data in the State's section 305(b) report.7
Historically,  EPA has relied on submission of the 305(b) report to determine that States have
satisfied the Section 106(e) eligibility requirement for the award of Section 106 grant funds.  As
explained in the FY2001 Clean Water Act Section 106 Grant Guidance, Regions have begun
conducting reviews of State monitoring programs and are working with States to strengthen these
programs over time [1].

States have taken very different approaches, within their resource limitations, to implement their
monitoring programs. They have applied a range of monitoring and assessment approaches (e.g.,
water chemistry, sediment chemistry, biological monitoring) to varying degrees, both spatially
and temporally,  and at varying levels of sampling effort. It is not uncommon for the reported
quality of a waterbody (i.e., attainment or nonattainment) to differ on either side of a State
boundary. Although some differences can be attributed to differences in water quality standards,
variations in data collection, assessment methods, and relative representativeness of the  available
data contribute more to differences in assessment findings.  These differences adversely affect
the credibility of environmental management programs.

EPA has issued  national guidance to promote and structure consistency in State monitoring
programs and to ensure that the Section 305(b) process provides nationally comparable data with
known accuracy [2, 3]. However, experts charge that EPA remains unable to make credible
statements about differences in environmental quality over time  and across the Nation [4, 5].
Also, in 1998, the Federal Advisory Committee on the  Total Maximum Daily Load (TMDL)
Program recommended that EPA assure needed improvements in State efforts to monitor water,
characterize the general health of aquatic systems, and determine (non)attainment of any
component of water quality standards, including narrative criteria and designated  uses [6]. A
2001 National Research Council report, Assessing the TMDL Approach to Water  Quality
Management, recommends, among other things, the development of a uniform, consistent
approach to ambient monitoring and data collection; increased resources for water monitoring;
the coordination of monitoring with program needs; endorsement of statistical approaches and
explicit acknowledgment of uncertainty; and the combining  of monitoring and modeling [7].
        See footnote 5 infra.  § 106(e) of the Clean Water Act provides that... "the Administrator shall not make
any grant under this section to any State which has not provided or is not carrying out as part of its program - the
establishment and operation of appropriate devices, methods, systems, and procedures necessary to monitor, and to
compile and analyze data on (including classification according to eutrophic condition), the quality of navigable
waters and to the extent practicable, ground waters including biological monitoring; and provision for annually
updating such data and including it in the report required under [section 305 of this Act]..."

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And most recently, a 2002 National Academy of Public Administration report, Understanding
What States Need to Protect Water Quality, notes that improved information on water quality
conditions, pollution sources, and program results will help states make more effective use of
limited resources [8].

B. Purpose

The purpose of this document is to recommend the elements of a State water monitoring
program, to provide a framework for the State to articulate its programmatic and resource
needs, and to serve as a tool to help EPA and the State determine whether a monitoring
program meets the prerequisites of CWA Section 106(e)(l) EPA recognizes that full
implementation of these elements will take time and resources and that currently many states do
not fully meet these elements for all their waterbody types.  For a State lacking many of the
elements, this implementation process may extend over a period of up to 10 years. EPA expects
the State to define annual milestones for incremental progress toward implementation of the ten
elements and to include these in its work plans for Section 106 grants and Performance
Partnership Grants (PPGs) that include Section 106 funds, consistent with the regulations
governing the negotiation of work plans at 40 CFR 35.107.

C. References

1. U.S. Environmental Protection Agency (U.S. EPA). 2001. Memorandum onFY2001 Clean
Water Act Section 106 Grant Guidance signed February 16, 2001 by Michael B. Cook, Director,
Office of Wastewater Management.

2. U.S. EPA. 1977. Basic Water Monitoring Program.  U.S. Environmental Protection Agency
Standing Work Group on Water Monitoring. EPA 440/9-76-0252.

3. U.S. EPA. 1997. Guidelines for Preparation of the Comprehensive State Water Quality
Assessments (305 (b) Reports) and Electronic Updates. U.S. Environmental Protection Agency,
Office of Water. Washington,  DC. EPA841-R-97-002Aand 002B.

4. National Academy of Sciences.  1977. A Report to the U.S. Environmental Protection Agency
from the Study Group on Environmental Monitoring, Committee on National Statistics, National
Research Council. National Academy of Sciences, Washington,  DC.

5. General Accounting Office. March 2000.  Water Quality-Key EPA and State Decisions
Limited by Inconsistent and Incomplete Data.  GAO/RCED-00-54.

6. National Advisory Council for Environmental Policy and Technology (NACEPT).  1998.
Final Report of the Federal Advisory Committee on the Total Maximum Daily Load (TMDL)
Program, http://www.epa.gov/owow/tmdl/faca/tofc.htm.
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7. National Research Council.  2001. Assessing the TMDL Approach to Water Quality
Management, Committee to Assess the Scientific Basis of the Total Maximum Daily Load
Approach to Water Pollution Reduction.  National Academy Press, Washington, D.C.

8. National Academy of Public Administration. December 2002. Understanding What States
Need to Protect Water Quality.  Academy Project Number 2001 -001.  http://www.napawash.org
                                         -3-

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II.  The Recommended Elements of a State Monitoring Program

A. Monitoring Program Strategy

The State has a comprehensive monitoring program strategy that serves all water quality
management needs and addresses all State water, including all waterbody types (e.g.,
streams, rivers, lakes, Great Lakes, reservoirs, estuaries, coastal areas, wetlands, and
groundwater).  The monitoring program strategy is a long-term implementation plan and should
include a timeline, not to exceed ten years8, for completing implementation of the strategy. It is
important that the strategy be comprehensive in scope and identify the technical issues and
resource needs that are currently impediments to an adequate monitoring program.

The State's monitoring strategy should contain or reference a description of how the monitoring
program elements described in the remainder of this document will be achieved.

EPA recommends that State monitoring program managers work with other State environmental
managers and interested stakeholders (including EPA Regions, other Federal water quality and
land management agencies, volunteer monitoring organizations, and academic institutions) as
they develop their strategy.  This collaboration provides the State water quality program an
opportunity to maximize its use of other parties' data and effectively expand its monitoring
resources. Many States have formed monitoring councils that help facilitate coordination of
monitoring activities among various organizations.

B. Monitoring Objectives

The State has identified monitoring objectives critical to the design of a monitoring
program that is efficient and effective in generating data that serve its management
decision needs. EPA expects the State to develop a strategy and implement a monitoring
program that reflects a full range of State water quality management objectives including, but not
limited to, Clean Water Act goals.  Consistent with the Clean Water Act, monitoring objectives
should reflect the decision needs relevant to all types of waters of the United States, including
streams, rivers, lakes, the Great Lakes, reservoirs, estuaries, coastal areas, wetlands and, to the
extent possible,  groundwater.

Clean Water Act objectives include:

•   Establishing, reviewing, and revising water quality standards (Section 303(c)).
    Determining water quality standards attainment (Section 305(b)).
    Identifying impaired waters (Section 303(d)).
    Identifying causes and sources of water quality impairments (Sections 303(d), 305(b)).
        i.e., no later than the end of FY2014

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     Supporting the implementation of water management programs (Sections 303, 314, 319,
     402, etc.).
     Supporting the evaluation of program effectiveness (Sections 303, 305, 402, 314, 319, etc.).

The State may have additional objectives for its own purposes.

In general, a monitoring program that meets the Clean Water Act objectives should be able to
answer the following five questions:

1.   What is the overall quality of waters in the State? Under Section 305(b) of the Act, the
     State determines the extent to which its waters meet the objectives of the Clean Water Act,
     attain applicable water quality standards, and provide for the protection and propagation of
     balanced populations offish, shellfish, and wildlife (40 CFR 130.8).

2.   To what extent is water quality changing over time? The  State assesses and reports on
     the extent to which control programs have improved water quality or will improve water
     quality for the purposes of "... the protection and propagation of a balanced population of
     shellfish, fish, and wildlife and . . . recreational activities in and on the water" (40 CFR
     130.8(b)(2) and 130.8(b)(l)).  Under Section 319(h)(ll) of the Act, a State with Section
     319 grants reports on reductions in nonpoint-source loadings  and related improvements in
     water quality. Under Section 314(a)(l)(F), a State reports on the status and trends of water
     quality in lakes. The State may address these requirements through the use of models (for
     load estimations) and by tracking trends in use  assessments. The State  also should be able
     to identify emerging environmental issues related to new pollutants or changes in activities
     within watersheds.

3.   What are the problem areas and areas needing protection? Under  Section 303(d), the
     State must identify impaired waters.  The State should also identify waters that are currently
     of high quality and should be protected from degradation. In order to protect and restore
     waters, State monitoring and assessment programs should identify the causes and sources of
     impairment.

4.   What level of protection is needed? The State establishes the level of protection that is
     being monitored against. For example, the State uses data from monitoring programs to
     conduct triennial reviews of state water quality standards, conduct use  attainability analyses,
     develop and adopt revised designated uses and water quality  criteria, establish water
     quality-based effluent limits in NPDES permits, establish total maximum daily loads, and
     assess which levels of best management practices for nonpoint sources are most
     appropriate.

5.   How effective are clean water projects and programs?  The State monitors to evaluate
     the effectiveness of specific projects and overall programs, including but not limited to
     Section 319 (nonpoint source control),  Section 314 (Clean Lakes), Section 303(d) Total
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     Maximum Daily Loads (TMDLs), Section 402 NPDES permits, water quality standards
     modifications, compliance programs (Discharge Monitoring Report information), and
     generally to determine the success of management measures.

C. Monitoring Design

The State has an approach and rationale for selection of monitoring designs and sample
sites that best serve  its monitoring objectives. The State monitoring program will likely
integrate several monitoring designs (e.g., fixed station, intensive and screening-level
monitoring, rotating basin, judgmental and probability design) to meet the full range of decision
needs. The State monitoring design should include probability-based networks (at the watershed
or state-level) that support statistically valid inferences about the condition of all State water
types, over time. EPA expects the State to use the most efficient combination of monitoring
designs to meet its objectives.

When developing designs to meet specific objectives, the EPA encourages States to consider
those designs used by EPA's Environmental Monitoring and Assessment Program (EMAP)
(probabilistic site selection using simple random, stratified, or nested designs) and the U.S.
Geological Survey's National Water Quality Assessment program (targeted, judgmental design
based on land use, geological setting, and other natural and human influences). An integrated
design for assessing water quality incorporates multiple tools in a tiered approach to address
management decisions  at multiple scales. These tools include probabilistic designs, landscape
and water quality modeling, and targeted site-specific monitoring. This tiered approach enables
States to make statistically valid inferences of the extent that waters meet water quality standards,
to predict which waters are most likely degraded or at risk for degradation, and to target site-
specific monitoring needed to address local water quality concerns.  The efficiencies of an
integrated design should extend beyond monitoring costs to program costs because it can help
States prioritize which waterbodies need more immediate attention.

The monitoring design should address the objectives outlined in Section B, above.  The design
should include a comprehensive approach to assessment using multiple indicators [1,2],  for all
State waters on a continuing basis.  The elements of the monitoring design should support the
State's estimation of the amount or percentage of waters that are impaired Statewide, for each
waterbody type, with a high degree of confidence.  The State is encouraged to use a design that
allows for estimations to within ±10% at a 90% confidence level for Statewide designs.  EPA
encourages the application of integrated monitoring designs that allow more intensive monitoring
in specific areas of concern or interest for individual States.

To meet its monitoring objectives, States should ensure that the selected monitoring design yields
scientifically valid results and meets the needs of the decision maker. The monitoring design
should incorporate appropriate methods to control  decision errors and balance the possibility of
making incorrect decisions. The levels of precision and confidence should be appropriate to the
monitoring objective and the type of data collected.
                                           -6-

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D. Core and Supplemental Water Quality Indicators

Because limited resources affect the design of water quality monitoring programs, the State
should use a tiered approach to monitoring that includes a core set of baseline indicators
selected to represent each applicable designated use, plus supplemental indicators selected
according to site-specific or project-specific decision criteria [1,2].  Using this tiered
approach, the State should be able to make the best use of its resources to meet water quality
decision needs, including assessing water quality standards attainment and designated use
support, identifying needed changes to water quality standards, describing causes and sources of
impairments, developing water quality-based source controls, and assessing whether physical,
chemical,  and biological integrity are supported.

The monitoring strategy should define a core set of indicators (e.g., water quality parameters) for
each water resource type that include physical/habitat, chemical/toxicological, and
biological/ecological endpoints as appropriate, that reflect designated uses, and that can be used
routinely to assess attainment with applicable water quality standards throughout the State. This
core set of indicators is monitored to provide Statewide or basin/watershed level information  on
the fundamental attributes of the aquatic environment and to assess water quality standards
attainment/impairment status. Previously, chemical and physical indicators were emphasized;
however, biological monitoring and assessment should assume a more prominent role in State
monitoring. [2, 3].

The strategy should also describe a process for identifying supplemental indicators to monitor
when there is a reasonable expectation that a specific pollutant may be present in a watershed,
when core indicators indicate impairment, or to support a special study such as screening for
potential pollutants of concern.  Supplemental indicators are often key to identifying causes and
sources of impairments and targeting appropriate source controls. These supplemental indicators
may include each water quality criteria in the State's water quality standards,  any pollutants
controlled by the National Pollutant Discharge Elimination System (NPDES),  and any other
constituents or indicators of concern.

Table 1 presents examples of recommended  core and supplemental water quality indicators.  The
Consolidated Assessment and Listing Methodology [4] provides additional information on
considerations for selection of supplemental indicators (see
http://www.epa.gov/owow/monitoring/calm.html. Chapter 11).

E. Quality Assurance

Quality Management Plans and Quality Assurance Project Plans are developed,
maintained, and peer reviewed in accordance with EPA policy to ensure the scientific
validity of monitoring and laboratory activities.  The Quality Management Plan  (QMP)
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Table 1. Recommended water quality indicators for general designated use categories
Recommended Core and Supplemental Indicators

Recommended Core
Indicators










Supplemental
Indicators



Aquatic Life &
Wildlife
*Condition of
biological communities
(EPA recommends the
use of at least two
assemblages)
*Dissolved oxygen
* Temperature
*Conductivity
*pH
*Habitat assessment
*Flow
*Nutrients
*Landscape conditions
(e.g., % cover of knd
uses)
Additional indicators
for kkes:
*Eutrophic condition
Additional indicators
for wetlands:
*Wetland
hydrogeomorphic
settings and functions
*Ambient toxicity
* Sediment toxicity
*Other chemicals of
concern in water
column or sediment
*Health of organisms


Recreation
*Pathogen indicators
(E. coli, enterococci)
*Nuisance pknt Growth
*Flow
*Nutrients
*Chlorophyll
*Landscape conditions
(e.g., % cover of knd
uses)
Additional indicators
for lakes:
*Secchi depth
Additional indicators
for wetlands:
*Wetland
hydrogeomorphic
settings and functions




*Other chemicals of
concern in water
column or sediment
*Hazardous chemicals
*Aesthetics



Drinking Water
*Trace metals
*Pathogens
*Nitrates
* Salinity
*Sediments/TDS
*Flow
*Landscape
conditions (e.g., %
cover of land uses)









*VOCs (in
reservoirs)
*Hydrophyllic
pesticides
*Nutrients
*Other chemicals of
concern in water
column or sediment
*Algae
Fish/Shellfish
Consumption
*Pathogens
*Mercury
*Chlordane
*DDT
*PCBs
*Landscape
conditions (e.g., %
cover of land uses)









*Other chemicals of
concern in water
column or sediment



documents how the State monitoring program will plan, implement, and assess the effectiveness
of its quality assurance and quality control operations. Quality Assurance Project Plans (QAPPs)
document the planning, implementation, and assessment procedures for a particular project, as
well as any specific quality assurance and quality control activities. EPA guidance on developing
QMPs and QAPPs is available at www.epa.gov/quality.

These plans should reflect the level of data quality that is appropriate for the specific uses of the
data, such as comprehensive assessment and listing of impaired waters, TMDL development,
NPDES permit issuance, and NFS effectiveness. Data quality and quantity needs are expected to
vary according to the consequences of the resulting water quality decisions.

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Under 40 CFR 130.4(b), State monitoring programs are to include collection and analysis of
physical, chemical, and biological data, and quality assurance and control programs to ensure the
data are scientifically valid. Under 40 CFR 31.45, if a grantee's project involves environmentally
related measurements or data generation, the grantee must develop and implement quality
assurance practices consisting of policies, procedures,  specifications, standards, and
documentation sufficient to produce data of adequate quality to meet project objectives and
minimize loss of data due to out-of-control conditions or malfunctions.

A grantee that uses Section 106 funds for monitoring activities should include, in its Quality
Assurance Program Plan (QAPP) or equivalent document, a description of how:

     Each study or monitoring program objective is defined in specific qualitative and
     quantitative terms and linked to an environmental management decision or reporting
     requirement associated with the goals of the Clean Water Act.

•    Selected indicators offer the most direct means of assessing the environmental attribute
     under study, based upon the associated requirement and goals of the Clean Water Act.

     The uncertainty associated with estimates and conclusions drawn from each component of
     the monitoring program are understood, quantified, and limited to a reasonable extent,
     commensurate with the potential costs (both monetary and environmental) of decision
     errors.

     The proposed sampling scheme will yield  data that are representative of the environmental
     attribute under study, with consideration of statistical probabilities associated with
     sampling.

•    The quality of the data is assessed and validated to ensure that the data quality objectives of
     the programs were met.

F. Data Management

The State uses an  accessible electronic data  system for water quality, fish tissue, toxicity,
sediment chemistry, habitat, and biological data (following appropriate metadata and
State/Federal geo-locational standards) with timely data entry and public access.

EPA's new STORET (STOrage and RETrieval) system provides an accessible, nationwide
central repository of water information of known quality.  In the future, EPA will require that all
States use STORET either directly or indirectly (e.g., via the Central Data Exchange (CDX)
which will include the Monitoring Data Standard). For States that do not currently operate
STORET, their monitoring strategies should provide for the use of STORET as soon as is
practicable. EPA is committed to providing updates and improvements to STORET to meet user
needs and to providing the State with training and other technical support.  See
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www.epa.gov/storet for further information on STORET, including system updates for users and
instructions on how to download data via the Web.

In addition, the State should store its assessment information in an accessible electronic database.
For the 2004 305(b) reports and 303(d) lists, EPA strongly recommends that all States use either
the Assessment Database (ADB) or an equivalent relational database for storing WQS attainment
status for each assessment unit.  See Appendix B of the 2002 Integrated Water Quality
Monitoring and Assessment Report Guidance [5] for further information on the electronic
reporting format.  This guidance is available at: www.epa.gov/owow/tmdl/2002wqma.html

The State also provides appropriate geospatial data to enable the use of current Geographic
Information System (GIS) tools. The 2002 Integrated Water Quality Monitoring and Assessment
Report Guidance, Appendix B, asks states to define the geographic location of assessment units
using the National Hydrography Dataset (NHD). The use of NHD is strongly recommended for
the 2004 305(b) reports and 303(d) lists.  The 1998 Content Standard for Digital Geospatial
Metadata [6] to label geospatial datasets applies to States and EPA. It provides for characterizing
geospatial data so that users can determine the data's fitness for their purpose.  For more
information, visit http://www.fgdc.gov/metadata/metadata.html.

G. Data Analysis/Assessment

The State has a methodology for assessing attainment of water quality standards based on
analysis of various types of data (chemical, physical, biological, land use) from various
sources, for all waterbody types and all State waters. The methodology should describe how
existing and available data and information relevant to applicable water quality standards,
including both core and supplemental indicators, will be compiled and analyzed to make
attainment decisions about State waters.  The methodology describes how the state integrates its
primary data - collected specifically for making attainment decisions according to a State QAPP
- with data from secondary sources, collected for a variety of purposes under a variety of quality
control practices.  (Secondary data could include, for example, volunteer monitoring data or
discharge monitoring reports.) The methodology should:

•    Identify the required or likely sources of existing and available data and information and
     procedures for collecting or assembling it;

     Describe or reference requirements relating to data quality and representativeness, such as
     analytical precision, temporal and geographical representation, and metadata documentation
     needs;

     Include or reference procedures for evaluating the quality of datasets; and

•    Explain data reduction procedures (e.g., statistical analyses) appropriate for comparing data
     to applicable water quality standards.
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For more information on developing assessment methodologies, see 40 CFR 130.7(b)(6)(iv) and
www.epa.gov/owow/monitoring/calm.html.

H. Reporting

The State produces timely and complete water quality reports and lists. The Clean Water
Act requires the State to provide certain reports and lists, including those listed below. EPA
encourages consolidation of reports wherever possible.

•    The Section 305(b) water quality inventory report, which includes Section 314 Lakes
     Assessments, characterizes the condition and quality trends of monitored waters within the
     State and is due on April 1 of even-numbered years. This is the primary State monitoring
     program report to EPA and draws upon information from the Clean Lakes program,
     nonpoint source program, TMDLs, and other national, State, and local assessments.

•    The Section 303(d) list identifies all impaired waters based on existing and readily available
     information.  The list is also due on April 1 of even-numbered years.

•    Section 406 of the Clean Water Act, as amended by the Beaches Environmental Assessment
     and Coastal Health Act of 2000, requires States with Section 406 grants to submit
     information on monitoring and notification programs for coastal recreation waters.

Other reports and products resulting from water monitoring program activities include, for
example, reports or analyses to  support triennial reviews, use attainability analyses (UAAs),
standards revisions, water quality based effluent limits (WQBELs) in permits, total maximum
daily loads (TMDLs), nonpoint  source programs, and watershed plans.

The 2002 Integrated Water Quality Monitoring and Assessment Report Guidance (November 19,
2001) provides States, Territories, and authorized Tribes with guidance for integrating the
development and submission  of 2002 305(b) water quality reports and Section 303(d) lists of
impaired waters. The Integrated Report will satisfy CWA reporting requirements for both
Section 305(b) water quality reports and Section 303(d) lists.

As explained in the FY 2001 Clean Water Act Section  106 Grant Guidance and the March 1,
2002 memorandum, "2002 Integrated Section 305(b) Reports and 303(d) Lists and the impact of
the 305(b) Reports on Annual S106 Grant Funding Targets", EPA will not award any Section
106 funding under a Section 106 grant or performance partnership grant (PPG) unless a State has
annually updated its monitoring data in accordance with Section 106(e), and submitted the most
recently required Section 305(b) report [7, 8]. The annual update requirement may be satisfied
by uploading monitoring data to the national STORET warehouse or updating the 305(b)
assessment information in the National Assessment Database.
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The State is encouraged to report to the public on water quality, taking into account the needs of
interested audiences. Many States use various formats and media such as technical reports,
brochures, posters and other visual aids, oral presentations, newspaper articles, and the Internet.

/. Programmatic Evaluation

The State,  in consultation with its EPA Region, conducts periodic reviews of each aspect of
its monitoring program to determine how well the program serves its water quality
decision needs for all State waters, including all waterbody types. This should involve
evaluating the monitoring program to determine how well each of the 10 elements is addressed,
and determining how needed changes and additions are incorporated into future monitoring
cycles.  This evaluation will take into consideration the effects of funding shortfalls on a State's
implementation of its monitoring program strategy. EPA and States recognize the importance of
a nationally consistent approach for evaluating state monitoring programs.

Since water quality monitoring programs are effective only when they meet the information
needs of water quality resource managers, the State should have a feedback mechanism for
reporting useful information to water quality managers and incorporating their input on future
data needs. Information needs may include site-specific criteria modification studies, support for
enforcement actions, validation of the success of control measures, modeling for TMDLs,
monitoring unassessed waters, and other activities. Decision-makers at the national, regional,
State, and local levels should be considered in this process.

The State should evaluate its overall monitoring program as part of a continuous improvement
feedback loop. This may include, for example, undertaking audits of the monitoring program,
quality assurance protocols, laboratory procedures, and data assessment procedures.  See 40 CFR
130.5 and 130.6.

J.  General Support and Infrastructure Planning

The State identifies current and future monitoring resources it needs to fully implement its
monitoring program strategy.

As part of an ongoing integrated planning process, the following needs (staff and training,
laboratory resources, and funding) should be assessed, considering current conditions and
planned improvements, and discussed with the Regions during negotiation  for Section 106 grants
and PPGs that include Section 106 funds (Note: States may rely on workload models to assess
needs).

Staff and Training: The State should identify the required number of staff needed for a State
monitoring program, as well as needed training for field, laboratory, data management, and data
assessment staff, and should document adequacies and shortfalls.  States should also address staff
and staff training needs for unassessed waterbody types.
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Laboratory Resources: The State should identify needed laboratory support (and should
document adequacies and shortfalls) to satisfy scientifically appropriate documented methods,
such as methods listed in 40 CFR Part 136, published in Standard Methods for the Examination
of Water and Wastewater, or published by the U.S. Geological Survey.  U.S. EPA also
encourages the use of performance-based methods (i.e., scientifically appropriate methods that
meet established criteria for accuracy, sensitivity, bias, and precision and comply with specified
data quality needs or requirements).

Funding:  The State should identify required funding (e.g., for salaries, training, travel,
equipment, laboratory  analysis) for a State monitoring program, along with anticipated sources
and amounts of funding and the effects of any shortfalls.

K.  References

1. Intergovernmental Task Force on Monitoring Water Quality.  February 1995. The Strategy
for Improving Water Quality Monitoring in the United States: Final Report of the
Intergovernmental Task Force on Monitoring Water Quality.
http ://water.usgs. gov/wicp/itfm.html

2. Yoder, C.O. 1997.  Important Concepts and Elements of an Adequate State Watershed
Monitoring and Assessment Program. ASIWPCA Standards and Monitoring Task Force.
Prepared for U.S. EPA Office of Water Cooperative Agreement CX825484-01-0. Washington,
DC.

3. National Research Council.  2001.  Assessing the TMDL Approach to Water Quality
Management, Committee to Assess the Scientific Basis of the Total Maximum Daily Load
Approach to Water Pollution Reduction. National Academy Press, Washington, D.C.

4. U.S. EPA. 2002. Consolidated Assessment and Listing Methodology -Toward a
Compendium of Best Practices,  http://www.epa.gov/owow/monitoring/calm.html

5. U.S. EPA. November 19, 2002. 2002 Integrated Water Quality Monitoring and Assessment
Report Guidance, http://www.epa.gov/owow/tmdl/2002wqma.html

6. Federal Geographic Data Committee. June 1998. Content Standard for Digital Geospatial
Metadata (FGDC-STD-001-1998). http://www.fade.gov/metadata/metadata.html

7. U.S. EPA. 2001. Memorandum on FY2001 Clean Water Act Section 106 Grant Guidance
signed February 16, 2001 by Michael B. Cook, Director, EPA Office of Wastewater
Management.
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8.  U.S. EPA. 2002.  Memorandum on 2002 Integrated Section 305(b) Reports and 303 (d) Lists
and the impact of the 305(b) Reports on Annual S106 Grant Funding Targets signed March 1,
2002 by Michael B.  Cook, Director, EPA Office of Wastewater Management.
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