Region 111 Library
                   Environmental Protection Agency    ^ £n,lronmr,{a! Pr3tec«on Ageacj
                                             Region 1H information Resource.
                                             Center (-PM52)
                                             841 Chestnut Street
                                             Pbite&lpiiia, PA  1910Z    -   -" -*
WATER QUALITY MONITORING  PROGRAMS FOR  SELECTED
SUBESTUARIES OF THE CHEASAPEAKE BAY
to
Environmental  Protection  Agency,
Environmental  Research  Laboratory
Athens,  GA

Environmental  Protection  Agency, Region  III,
Chesapeake Say Program
Annapolis, MD

Maryland Department of  Natural Resources,
:,teter  Resources Administration
Annapolis, MD

'-'irginia State idater  Control  Board,
/'ureau  of Water Control Management
rlichmond, VA
SM Brown
RM Ecker
June  27,  1973
3ATTELLE,
Pacific'Northwest Laboratories
Rich land,  UA  99352
                                             EPA Report Collection
                                             Information Resource Center
                                             US EPA Region 3
                                             Philadelphia, PA 19107

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                                                            s ;. - :  i'.^..judi'i Source
                                   SUMMARY                  C,. ;•;;,„/:]
                                   	                  L:; :/, ., :.::„,A
                                                            Fi,;:dJ,;.,,:u;hi  19107       .
     In order to obtain the data required to tast and compare existing,  state-
of-the-act estuary water quality models, comprehensive  sampling programs  have
been designed for the following subestuaries of Chesapeake  Bay:   Chester  River,
Maryland; Patuxent River, Maryland; Poquoson River, Virginia; and Ware  River,
Virginia.  Water quality data collected under these programs include those
parameters required to characterize eutrophication, carbon  cycling  and  pollu-
tant and gross sediment transport.  While data on sediment-bound  contaminants,
such as pesticides and trace metals, and detailed ecosystem dynamics were not
included in the program design, the programs have been  structured so that
these types of sampling can be added in the future.   In addition  to  providing
data for model testing, the recommended sampling programs have  also  been
designed to provide the States of Maryland and Virginia with the  information
they require for water quality planning and management.
     The physical, chemical and biological parameters which have  to  be
sampled to characterize the dominant water processes  occurring  in each
subestuary are identified.  In addition, the EXPLORE  model  is used  to illus-
trate the relationship between the sampled parameters and model input and
calibration/evaluation data requirements.  EXPLORE was  recommended  as the basis
for sampling program design and parameter selection by  the  Environmental
Protection Agency's Environmental Research Lab in Athens, Georgia.
     A generalized sampling program consisting of two components  was formulated.
The first component involves conducting two intensive sampling  programs  each
year to identify short-tami (i.e., tidal cycle) variations  in water quality
conditions.  The second component consists of monthly trend monitoring  to
identify long-term (i.e.,  seasonal) variations.  Both  types of data are
required for model testing and evaluation.  Also included in  the  generalized
program are sampling procedures, site  selection criteria, parameter sampling
frequencies, ana sample preservation and handling guidelines.
     Specific sampling programs were developed by appling the generalized
program to each subestuary.  Sampling  transect and  station  locations and
recommended sampling depths are  identified along with the number  of samples

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which have to be taken of each parameter.  The number of samples are given
on a per intensive sampling program basis or per year of trend monitoring
basis for use in estimating the costs of subestuary sampling.

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t                 »

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                                  CONTENTS

SUMMARY	-Hi
LIST OF FIGURES	ix
LIST OF TABLES	xi
INTRODUCTION	    1
     STATEMENT OF THE PROBLEM 	    1
     PURPOSE	    Z
     SCOPE	    2
PARAMETER SAMPLING AND USE IN MODELING 	    5
     PHYSICAL DATA REQUIREMENTS  	    6
          Hydrodynanri c Data	    7
          Meteorological Data 	    9
          Salinity	    9
          Water Temperature.  .     	10
          pH Data	10
          Suspended Sediment Load and Bed Sediment Characteristics.   .   10
     CHEMICAL DATA REQUIREMENTS	10
          Carbonaceous Biochemical Oxygen Demand Data 	   11
          Carbon Data	1Z
          Nitrogen- Data	12.
          Phorphorus Da.ta	13
          Dissolved Oxygen Data	13
     BIOLOGICAL DATA REQUIREMENTS	13
          Phytoplankton Data  	   H

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*                 *

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          Bacteria Data	      14
     ESTUARY MODELING	15
          Carbonaceous Biochemical  Oxygen Demand.  .......   16
          Benthic Biochemical  Oxygen Demand  	   16
          Total  Organic Carbon	17
          Nitrogen	17
          Phosphorus	18
          Dissolved Oxygen 	   20
          Carbon Cycle	"...   22
GENERALIZED SAMPLING PROGRAM  	   25
     SAMPLING METHODOLOGY  	   25
          Intensive Sampling Program	25
          Trend Monitoring	25
     SAMPLING PROCEDURES	27
          Sita Selection	27
          Site Location in the- Field	28
          Sampling Frequencies	29
          Bathymetric Surveys 	   29
          Data Collection	30
          Sampling Preservation and Handling 	   31
SPECIFIC SAMPLING PROGRAMS 	   35
     CHESTER RIVER, MARYLAND	36
          Site Description	36
          Sampling Site Locations	38
     PATUXENT RIVER, MARYLAND 	   42

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          Site Description 	  .....   42
          Sampling Site Locations	42
     POQUOSON RIVER, VIRGINIA 	   47
          Site Description	   47
          Sampling Site Locations	   .   47
     WARE RIVER, VIRGINIA	49
          Site Description	49
          Sampling Site Locations	53
REFERENCES	57

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                                  FIGURES

 1   Cheasapeake Bay	-.   .     3
 2   Example Field Log	33
 3   Chester River	37
 4   Recommended Sampling Locations - Chester River	40
 5   Patuxent River  	    43
 6   Recommended Sampling Locations - Patuxent River  	    45
 7   Poquoson River  	    48
 8   Recommended Sampling Locations - Poquoson River  	    50
 9   Ware River.	52
10   Recommended Sampling Locations - Ware River	54

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                                   TABLES
 1    Samoling Frequencies for Physical Parameters  .......   29
 2   Sampling Frequencies for Chemical Parameters  	  .   .   30
 3   Sampling Frequencies for Biological  Parameters	31
 4   Recommended Preservation Methods  	   32
 5   Chester River Sampling Locations  .   .   	   39
 6   Total  Number of Samples Required on the Chester River Per
     Intensive Program or Per Year of Trend Monitoring	41
 7   Patuxent River Sampling Locations 	   44
 8   Total  Number of Samples Required on the Patuxent River Per
     Intensive Program or Per Year of Trend Monitoring	46
 9   Poquoson River Sampling Locations 	   49
10   Total  Number of Samples Required on the Poquoson River Per
     Intensive Program or Per Year of Trend Monitoring	51
11    Ware River Sampling. Locations   	   53
12   Total  Number of Samples Required on the Ware River Per
     Intensive Program of Per Year of Trend Monitoring	55

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                                INTRODUCTION

     Numerous mathematical  computer models have been developed to simulate the
contribution of diffuse or nonpoint source pollutants to waterbodies as well  as
the transformations which occur to both point and nonpoint source pollutants
in the waterbodies themselves.  Nonpoint source pollution models generally
simulate the processes of rainfall-runoff, soil erosion and pollutant transport.
Water quality models simulate the dominant physical, chemical, and biological
processes which influence water quality conditions in various types of water-
bodies, including rivers, lakes, estuaries and oceans.  The capabilities of
these models range from simple, steady-state models which simulate the long-
term, (i.e. ,  annual or seasonal) variation of selected parameters to complex,
dynamic (i.e., time-varying) models which simulate parameter changes in
several spatial dimensions.   The time scale of the water quality condition
or process being evaluated usually determines which type of model is applied.
     Mathematical computer models also provide both diagnostic and predictive
capabilities—diagnostic in that the proper application of a model requires
the user to identify and understand the specific factors affecting water
quality changes and predictive in that the model can be used to simulate the
effects of proposed changes in a watershed or waterbody.  These capabilities
render mathematical models extremely powerful tools in water quality planning
and management.

STATEMENT OF THE PROBLEM
     To date there has been no coordinated effort to collect the water quality
data required: to adequately apply, test and compare various types of nonpoint
and water quality models in order to assess their relative- effectiveness as
management tools.  This condition has prompted the Environmental Protection
Agency (EPA) to implement a set of comprehensive water quality sampling pro-
grams in several basins and subestuaries. of the Chesapeake Bay.  The intent
of these sampling programs is to obtain complete and valid data sets which can
be used to calibrate and evaluate existing state-of-the-art nonpoint source
and river and estuary water quality models.  The data collected under these

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programs are to be sufficiently detailed for use with the more sophisticated
models in each class as well  as the simplified models.

PURPOSE
     The purpose of the model testing is twofold.  First, the model  testing
will help identify the most economical  models and combination of models which
provide the information required to make water quality planning and management
decisions.  Secondly, the testing of various models against a comprehensive
set of data will make it possible to determine: whether existing models ade-
quately simulate the processes which control water quality changes.   This will
aid in the identification of research which must be completed in order to
further the state-of-the-art of water quality and nonpoint source modeling.
     BatteHe-Northwest and Hydrocomp,  Inc. have been given the responsibility
to design sampling programs for the following tributaries of the Chesapeake
Bay:  Patuxent River, Maryland; Chester River, Maryland; Ware River, Virginia;
and Poquoson River, Virginia (see Figure 1).  Battelle-Northwest is respon-
sible for developing the sampling programs for the subestuaries formed by each
of the above tributaries.  For the purpose of this program, a subestuary is
defined as the body of water bounded by the head-of-tide (i.e., the location
where the tributary is no longer tidally influenced) to the intersection of
the subestuary with Chesapeake Bay proper.  Hydrocomp, Inc. is developing the
river water quality sampling program for locations upstream' of the head-of-
tide in addition to the nonpoint source sampling programs.  The States of
Maryland and Virginia will be responsible for implementing the programs in
their respective basins.  Care has been taken to ensure that the water quality
parameters collected irr the freshwater systems are compatible with those
collected in- the- subestuaries.

SCOPE
     Data collection under the- programs being designed by Eattelle-Northwest
includes those parameters which are required to characterize eutrophication
and pollutant transport in the subestuaries.  These sampling programs should

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    BALTIMORE*^
                     ':CHESTER R
   WASHINGTON-
  ./&/PATIJXENTR.
POTOMAC R.^r
RAPPOHANNOCK Rh
                   POQUOSON
      NEWPORT NEWS
       FIGURE 1.  Chesapeake Bay

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generate the data required to calibrate and apply one of the more sophisti-
cated estuary water quality models currently available for use.  The EPA's
Environmental Research Lab in Athens, Georgia recommended using the EXPLORE
model [Baca et a!., 1973] as the basis for sampling program design and para-
meter selection.  In addition, the sampling programs are to generate data on
the carbon cycle and gross sediment transport.  While data on sediment-bound
contaminants, such as pesticides and trace metals, and. on detailed ecosystems
dynamics are not to be collected initially, the programs are structured so
that this type of sampling can be added in the future.
     The next three sections of this report comprise Battelle's design of the
sampling programs for eutrophication and pollutant transport in the subestuaries.
The first section discusses the parameters to be sampled and their relation-
ship to estuarine water quality modeling with EXPLORE.  The second section
presents the components of a generalized estuary sampling program including
sampling methodologies and procedures, site selection, sampling frequencies
and sample handling.  This generalized program is applied to each of the four
subestuaries in the final section.
     Due to time and funding limitations, it was difficult to incorporate many
of the specific characteristics of each subestuary into the program design.
In addition, the major consideration in designing these programs was to obtain
the data required to meet the model testing objectives.  Sampling costs have
not been considered in detail since this task was left up to the individual
states.  Therefore, it is possible that the cost of the recommended programs
may exceed the funds allocated to each state for sampling.  As a result, the
States of Maryland and Virginia may have to refine and possibly condense the
recommended programs based on:  1) their knowledge of factors which control
water quality conditions in each subestuary, 2) past,, present or planned data
collection efforts which could possibly supplement elements of the proposed
programs, 3) available sampling and water quality analysis resources, and
4) the State's priorities with respect to water quality management in each
subestuary.

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                   PARAMETER SAMPLING AND USE IN MODELING

     In the application,  calibration and evaluation of water quality models
three categories of data  are required:  interpretive data,  model  input data,
and comparative data.   Interpretive data include various information sources
such as maps, charts,  past water quality studies and modeling efforts, and
basin plans which are  not directly used as input to the model but are necessary
background information required to familiarize the model user with the water
body.  This report will  not address this category of data since it is not a
normal element of a sampling program.
     Input data are the data required to drive the model and have it simulate a
specific sequence of events or water quality condition.  In estuarine modeling,
these data generally consist of point and nonpoint inflow quantities and quali-
ties, tidal fluctuations  and meteorological  conditions for the period of simula-
tion.  Data specifying the water quality and hydrodynamic conditions at the
beginning of the simulation period (i.e., initial and boundary conditions) are
also required as input.
     The final category,  comparative data, are required in the model calibra-
tion and evaluation processes.  It is difficult to specify the values of cer-
tain system parameters such as chemical reaction rates and biological uptake
rates a priori.  Although the order of magnitude of these parameters, often
called calibration coefficients, is usually known, the means for more precise
independent specification for many of the coefficients are presently not avail-
able.  Consequently, model predictions are compared to field data and the
calibration coefficients are varied until simulated values match measured
values to an acceptable level.
     Following this coefficient adjustment process, models are- then evaluated.
Water quality model evaluation or verification involves additional model test-
ing  to determine how closely the model predictions can match different sets  of
measured conditions without a change in coefficient values.  It is best if the
measured conditions used for model evaluation represent substantially different
water Quality and flow conditions than those used for calibration.  This pro-
vides added confidence in the calibration coefficients and in the model's

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ability to simulate widely varying conditions.  It is often recommended that
at least three sets of data be used in the model  calibration/evaluation phase,
one for gross calibration, the second for refined calibration and the third
for verification.
     Existing estuary water quality models simulate the concentration or distri-
bution of a constituent, property or parameter in an estuary.  Accordingly, the
processes represented by the model are generally classified as either transport
processes or reaction processes.  Transport processes are basically hydrodyna-
mic and include advection, turbulent diffusion, and, when spatial averaging is
involved, dispersion.  Reaction processes encompass the sources and sinks to
which the parameter is subjected and may be physical, chemical or biological,
(e.g., sedimentation and flocculation of organics, uptake of oxygen in bio-
chemical degradation of wastes, algae loss by zooplankton grazing, etc.).  The
relative importance of transport processes and reaction processes obviously
varies from estuary to estuary, and depends upon the parameter modeled as well
as the required spatial and temporal refinement.   The following describes the
physical, chemical and biological parameters which will be sampled for estuary
model testing.  The collection of these data for the purpose of model input,
calibration/evaluation or both will also be discussed.

PHYSICAL DATA REQUIREMENTS
     Physical data which will be collected during the sampling programs for
input to and for use in the calibration of water quality models include the
following:
  *  hydrodynamic data (estuary geometry, water surface elevation variations,
     currant velocity and direction, freshwater discharge, and point source
     discharge)
  •  meteorological data (solar radiation" and/or air temperature, precipita-
     tion, wind speed and direction-, and wave height, period and direction)
  *  salinity data

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  »  water temperature data
  •  pH data
  ••  suspended sediment load and bed sediment characteristics
Hydrodynamic Data
     Estuary Geometry
     Estuary geometry data in the form- of bathymetric data are required input
to most estuary water quality models for use in calculating the flow field.
These data consist of either cross-section profiles for calculation of cross-
sectional area at designated transects along the estuary or 'discrete point
depths such as would be developed by superimposing a "grid" or "cell" pattern
over the estuary.  These data should be referenced to some datum such as mean
sea level or mean low water.  Bathymetric data are usually available in the-form
of U.S. Coastal and Geodetic Navigation Charts and Boat Sheets (National Ocean
Survey), U.S. Army Corps of Engineers Hydrographic Surveys, and U.S. Geological
Survey surveys.  The bathymetric data obtained from these sources should be
supplemented and verified in the field, at least to the extent of conducting
longitudinal profiles and cross-section profiles at designated transects.
     Water Surface Elevation
     Water surface elevation changes due to tidal and nontidal effects are
also needed for the calculation of the flow field.  Depending on the water
quality node! employed, the time varying water surface elevations can be input
at each computation point or only at the open boundaries.  In the latter case,
water surface elevations at computation points other than the open boundaries
ara computed internally within the computer program.  Even with the latter
case models,, it is necessary to have the water surface elevation data at other
points for calibration and verification purposes.  Water surface elevation data
for the Chesapeake Bay area are available through the U.S. Department of Commerce,
National Ocean Survey '''High and Low Water Predictions, East Coast of North and
South America" [Tide Tables, 1978].  These annually published tide tables do
not include day to day variations in sea level due to changes in winds and
barometric conditions, nor do they account for unusual changes in freshwater
                                     7

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discharge conditions, all of which will cause the tide to be higher or lower
than predicted.  Time of high and low water can also differ from the predicted
times due to these factors.  To correlate the predicted tides to the actual
tides, tide gages should be established at strategic locations in the sub-
estuaries.  The National Ocean Survey should be contacted for the locations of
existing gages and for help in selecting the locations and number of new gages.
     Current Velocity and Direction
     Current velocity and direction are not normally required as input to the
hydrodynamic portion of a water quality model.  They are calculated based on
the time varying water surface elevations and estuary geometry.  However,
current velocity and direction data are required for the calibration and veri-
fication of the hydrodynamic submodels.  Lateral and longitudinal time
varying current velocity data should be collected at various depths in the
flow field, especially in the lower saline reaches of the estuary regardless of
whether the models are one- or multi-dimensional.  Current velocity data are
required for two reasons:  1) to evaluate the dimensional effectiveness of a
particular model, i.e., whether a model of less than three dimensions can
adequately simulate the hydrodynamics of a three-dimensional system, and 2) to
obtain lateral, vertical or time-averaged velocity fields for calibration of
the models.  Current velocity data are especially important in the lower
reaches of the estuary because of the possibility of multi-layered circulation
patterns from vertical variations in water density.  Predicted tidal current
tables for various locations within the Chesapeake Bay area are available
through the U.S. Department of Commerce, National Ocean Survey [Tidal Current
Tables, 1978], but these data are not published in sufficient detail to be used
for calibration- purposes.  The predicted values may also vary from the actual
values for the same reasons the actual tidal elevations differ from the pre-
dicted tidal elevations.
     Freshwater and Point Source Discharges
     Freshwater and point source pollution discharges into estuaries are used
as input parameters in water quality models.  Daily discharges of the major
river and stream tributaries to each subestuary should be obtained from

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the U.S. Geological  Survey and cooperating Stata and other Federal  agencies.
Flow data on point sources of pollution, such as municipal sewage treatment
plants and power plants, should be obtained from the dischargers if possible.  If
such data are not available, estimates will have to be made from other sources
of information (e.g., discharge permits).   Data on freshwater discharges from
rainfall-runoff can  be obtained from the Hydrocomp, Inc. program discussed-
previously.
Meteorological Data
     Meteorological  data may or may not be used as input to an estuary water
quality model.  Models which calculate water temperature instead of requiring
it as an input need  the following input data:  daily solar radiation, average
air temperature, average dewpoint, average relative humidity and wind speed.
All of these parameters are normally available through the National Weather Ser-
vice.  Precipitation data are often required as input to water quality models.
These data can also  be obtained from the National Weather Service.   A few models
calculate wave height, period and direction from wind speed and direction data.
Wave data for use in calibrating these models may be obtained from direct observa-
tions during sampling or from wave gaging stations.-
Salinity
     Salinity (or specific conductance) data should be collected for water
density computations, the interpretation of seasonal and diurnal characteris-
tics and the evaluation of vertical and longitudinal circulation patterns.
Salinity distributions in estuaries have a profound effect on suspended sedi-
ment loadings in the water column, and sediment deposition and erosion.  The
sedimentation patterns and loadings in turn have an effect on nutrient and con-
taminant transport and loadings.  Salinity distributions are accounted for in
many water quality models only in terms of its effect on other water quality
parameters.  Although-, salinity data may not be used directly in many of these
models, the data should be collected for evaluating the processes responsible
for the distribution of other water quality parameters.

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Water Temperature
     Water temperature is an input parameter on many water quality models,
requiring the collection of water temperature during the field sampling pro-
gram.  Where water temperatures are computed from meteorological parameters,
water temperature data are required for model calibration and evaluation.
Vertical and lateral temperature data are needed for averaging purposes on one-
and two-dimensional models.  The water temperature of all major freshwater
inflows and point sources of pollution should also be sampled.
pH Data
     Data on the hydrogen ion activity or pH of a water body are required as
input to some models, but are generally used more as indicators of the chemi-
cal composition of a water sample.  For example, pH data are required to cal-
culate the carbonate, bicarbonate and carbon dioxide concentrations from
alkalinity.  In addition, pH has been found to be a useful indicator of the
potential for ammonia oxidation to nitrate.  This use of pH data is discussed
in greater detail in the Estuary Modeling Section.  pH data should be collected
at all subestuary sampling locations and in the major inflows to each sub-
estuary.
Suspended Sediment Load and Bed Sediment Characteristics
     Suspended sediment loadings and bed sediment characteristics data should
be collected because of the important role sediments play in the availability
of nutrients and transport of contaminants in estuaries.  Time varying sus-
pended sediment concentration data should be- obtained at aach sampling station
and depth in order  to estimate gross suspended sediment transport and for
the analysis of the nutrient contents, described  in the following section on
chemical data requirements.  Bed.  sediment samples should also be collected for
grain size determinations and analyses of chemical parameters discussed in the
following section.

CHEMICAL DATA REQUIREMENTS
     The primary categories of chemical data which should be collected for
model input, calibration and evaluation include  the following:
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  «  carbonaceous biochemical  oxygen demand data
  *  carbon data
  •  nitrogen data
  •  phosphorus data
  •  dissolved oxygen data
The specific parameters to be collected under each of the above categories of
chemical  data are discussed below.   Later in this section the relationship
between these parameters and estuarine water quality modeling with EXPLORE
is discussed.  The sampling frequencies for each parameter are discussed
in the Generalized Sampling Program Section.
Carbonaceous Biochemical Oxygen Demand Data
     Carbonaceous biochemical  oxygen demand (CBOD) is a measure of the amount
of oxygen required by micro-organisms to decompose aerobically the carbonaceous
fraction of the organic matter present in a water sample.  The "ultimate" CBOD
is the amount of oxygen required for complete oxidation.  For convenience in
laboratory analysis, the 28-day CBOD of a sample can be used as an estimate
of ultimate CBOD.  A chemical  inhibitor should be used to insure, that the
                   —	•	.	   *\        j^
nitrogenous portion of the 800 is suppressed.          -r/^''^, a- '  --a?
                                                       •joe,  o : oy*rt .-» , A1 ~£,
     Ultimate CBOD data are required for both model input and model  calibration/
evaluation.  All point sources of pollution (e.g., municipal  sewage treatment
plants), tributary inflows and the watsrs entering a subestuary from Chesapeake
Bay should be sampled for model input.  During the characterization of bed
sediments, the area! extent (i.e.,  mg per unit area) of benthic CBOD should
also be sampled at each sampling location for input purposes.  This will
require the use of a. core sampler or other sampling device- which collects
bottom- samples fronr a known area.  Nonpoint source inputs of CBOD do not
have to be sampled under this program since they will be accounted for in the
Hydrocomp, Inc. program.
     For model calibration and evaluation, ultimate CBOD samples should be
taken in the water column and from the bottom at each subestuary sampling
location.  These data will be used to calibrate and verify the model  rate
coefficients for CBOD degradation,  settling and scour.
                                     11

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Carbon Data                 '- --'"•--•*
     Two types of carbon data should be coll acted during the sampling programs:
data required for modeling total organic carbon (TOC) variations and data for
characterizing the carbon cycle in each subestuary.  The data which should be
collected in order to model TOC include the TOC and chemical oxygen demand
(COD) of all inputs to the subestuary.  These inputs include tributary and
waste source inflows and waters from the Chesapeake Bay.  TOC and COD deter-
minations should also be made on water samples collected at each sampling
station.  These data are required to calibrate and evaluate model reaction
rates and scour coefficients.   The use of COD in modeling TOC is described
later in this section.
     The characterization of the carbon cycle in each subestuary will involve
the sampling of total alkalinity in the inflows as well as in the water
column at each sampling location.  Alkalinity can be used in conjunction with
pH and water temperature to determine the concentrations of individual inorgan-
ic carbon components (i.e., CO-, HCQZ, COZ) [Standard Methods, 1975].  In
addition to taking these data in the water column, bed sediments should be
collected at each location for the analysis of organic and inorganic carbon
content.  This sampling can be conducted in conjunction with the bed sediment
characterization sampling.  Changes in- TOC and the inorganic carbon components
throughout the duration of the sampling programs will provide a basis for
characterizing both the short-term (i.e., diurnal) and long-term (i.e., sea-
sonal) carbon cycling in each subestuary.
Nitrogen Data
     In order to obtain data suitable for modeling nitrogen cycling in the-
subestuaries, the following nitrogen species' should be analyzed in all the-
inflows to each subestuary and at each sampling location:
  •  ammonia-nitrogen
  »  nitrate-nitrogen
  »  nitrite-nitrogen
  *  Kjeldahl-nitrogen
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These species should be measured in both filtered and unfiltered samples.
The inflow nitrogen data are required for model  input.  The subestuary sampling
station data are required for the calibration and evaluation of the various
rate constants used in modeling nitrogen cycling.
Phorphorus Data
     Filtered and unfiltered water samples should be collected in each- inflow
to the suitestuaries and at each sampling station location.  These samples
wilV'be analyzed for the following phosphorus components to obtain data for
model input and calibration/evaluation:
                                       \    \   ^__
 f? total phosphate               r~-Jv+4<>*
  C»_ total orthophosphate
  ^  total filtrable phosphate
 \»  filtrable orthophosphate
In addition to these data taken in the water column, bed sediment samples
should also be taken at each subestuary sampling location.  These sediment
samples should be analyzed for orthophosphate and organic phosphate.
Dissolved Oxygen Data
     The dissolved oxygen (DO) input data which have to be collected during
the  sampling programs are- the DO concentrations in all inflows to each
subestuary.  These inflows include freshwater tributaries, point source waste
loads and Chesapeake Bay waters entering at the mouth of the subestuary.
     For model calibration, dissolved oxygen data should be collected at each
sampling station in the subestuary.  These data are required to establish the
coefficients in the expressions for dissolved oxygen reaeration.  Following
model calibration, dissolved oxygen data from each sampling station are also
required to evaluate- the model's capabilities to simulate dissolved oxygen
variations under a range of hydrologic and water quality conditions.

BIOLOGICAL DATA REQUIREMENTS
     Estuary water quality changes are controlled not only by numerous physi-
cal  and chemical factors but also by the growth and death of various biological
                                     13

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species.  This section will briefly discuss the biological parameters which
should be sampled in order to generate the required model input and calibration/
evaluation data.  Two categories of biological parameters should be sampled,
those related to phytoplankton and those related to bacteria.  The use of
these parameters in modeling water quality Variations with EXPLORE is dis-
cussed later in this section.
Phytoplankton Data
     The input data required for modeling phytoplankton dynamics includes
various physical and biological parameters.  The physical parameters include
depth, water temperature and water clarity.  The sampling requirements for
the first two parameters were discussed previously in this section.  Water
clarity data are obtained by using a Secchi Disk.  The depth at which this
device is barely visible when submerged is called the Secchi Disk depth.
The inverse of this measurement, called the extinction coefficient, is used
as input to the model to represent the degree of water clarity.  Secchi Disk
readings should be taken at each sampling location in the subestuary.
     The biological parameters which are required as input include phytoplankton
and zooplankton concentrations (expressed as mg-C/i) for each tributary inflow
and across the mouth of the subestuary.  Any of several collection methods,
including plankton and zooplankton towing nets or a Juday trap, can be used
to sample these locations.  Sufficient quantities of water must be sampled
in order to obtain- enough organisms for dry and ash-free weight determinations
[Standard Methods, 1975].  Since biomass is composed of approximately 50*
carbon by weight, the dry and__ash-free weight data can de used to determine
the milligrams of carbon per unit volume for both plankton and zooplankton
species.
     Similar data should also be- collected at each subestuary sampling loca-
tion.  These data are- required for the calibration and evaluation of phyto-
plankton growth- and death rates and zooplankton grazing rates.
Bacteria Data
     Currently, there are no reliable techniques for independently estimating
the values of the rates of ammonia oxidation to nitrite and  nitrite oxidation

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to nitrate other than through the model  calibration process.   Bacteria counts,
however, are one biological  parameter which can be used as an indicator in
determining if nitrification is occurring.  Ammonia, nitrite and nitrate
concentrations can be continually changing in an aquatic system but if the
correct bacteria (nitrosomonas and nitrobacter) are not available, the nitrifi-
cation process and the resultant uptake of dissolved oxygen will not proceed.
Tuffey, Hunter, and. Matulewich [1974] have found that established communities
of nitrifying organisms only predominate under certain hydraulic conditions.
They noted, that shallow, surface-active areas (i.e., water bodies with rocky
bottoms that offer a high surface area to waters flowing nearby) and deep,
slow moving areas with long residence times show^ the highest degree of nitrifi-
cation.  It is recommended that enumerations be made of water samples and
sediment samples taken at each sampling station to determine the concentration j  -• -4
ESTUARY MODELING
     In order to illustrate how the physical, chemical, and biological para-
meters which have been recommended for sampling are used in water quality
modeling, the EXPLORE model is used as an example.  EXPLORE is composed of a
set of" submodels which describe the behavior and interactions of various water
quality parameters.  The primary water quality submodels in EXPLORE include:
  »  carbanaceous biochemical oxygen demand (CBOD)
  »  benthic biochemical oxygen demand
  *  total organic carbon
  »  nitrogen
  *  phosphorus
  *•  dissolved oxygen-
Various physical, chemical,, and biological data are required as input to each
of these submodels as well as for use in selecting the appropriate values for
various reaction rates and model coefficients.  Each of the above submodels
are briefly discussed below along with the water quality parameters which are
used in each submodel.  Detailed descriptions of the mathematical formulations
                                     15

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used  in each submodel are  included  in  the Appendix.   Following  the  submodel
discussion a brief description of the  carbon  cycle  is  presented.
Carbonaceous Biochemical Oxygen  Demand
      In general, 800 has been observed to occur  in  two  stages,  the  carbonaceous
stage in which  heterotrophic organisms oxidize the  carbonaceous  fraction  of the
organic material and the- nitrogenous stage  in which autotrophic  bacteria
oxidize the nitrogenous fraction of the organic  matter.   In  EXPLORE,  nitrogenous
BOD is accounted for in the nitrogen submodel.   The behavior of  carbonaceous
BOD is modeled  as a first-order  reaction in which the rate of change  of CBOD,
sometimes called the deoxygenation  rate, is proportional  to  the  amount of
CBOD  present.
      In order to obtain an estimate of this rate independent of  the calibration
procedure, CSOD time-series data should be  obtained in  the laboratory.  CBOD
                   •
time-series consist of measuring the oxygen depletion due to CBOD decay in  a
series of samples after different periods of  time (i.e.,  1,  3,  5, 10, 15, 20,
and 28 days).   The rate of CBOD  decay  can then be calculated using  one of
several methods [Hewitt and Hunter, 1975].  . Wh i 1 e _th ls_ pcacedur e_. doesjig t_
provide exact rates of decay for use in modelcalibration, it does  establish
the probable lower limit for this model coefficient.
Benthic Biochemical Oxygen Demand
      In EXPLORE,oxygerr demand of the benthic  layer  is considered to be composed
of two separate parts:; the demand of the organic sludge undergoing  decomposi-
tion  on the bottom of the  water  body and the  photosynthetic  and  respiratory
contributions of attached  algae  and rooted  aquatic  plants.   The  modeling  of
attached algae  is discussed  later in this section.  Benthic  oxygen  demand is
modeled in much the same way as  CSOD in EXPLORE.
^--Ai»  ill  Ltiy-  cyuunmended-CBOD  analysis procedures,  time-series laboratory
analyses should also be performed on the benthic samples  to  obtain  an estimate
"of the~benthic  deoxygenation coefficient.   If benthic BOD is a  major  sink of
dissolved oxygen in a subestuary,  this sampling  procedure should greatly
enhance the model calibration process  since this component  is  often either
 ignored or  treated as an unknown.
       t              •
       ^
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                     1     z-<*'~*   o. •   -**-£.  I3w<, .
                                                          ''1
                                            .- e. c a ^ w^ -, ^
                  .    -

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Total Organic Carbon
     Many attempts have been made to develop a general  relationship between
total organic carbon (TOC) data and BOD or COD data.  However, two problems
have been encountered in attempting to correlate the results of these data.
First, the ratios of TOC/BOD and TOC/COD change from one type of waste to
another.  This variation is attributed to the fact that while the TOC test
measures the amount of organic carbon present, it yields no information about
the chemical form of the carbon or its ability to be degraded biologically.
Second, the ratios of TOC/BOD and TOC/COD change as the waste undergoes oxida-
tion so that ratios determined at one point in time would not be the same at a
later time.
     Organic carbon can generally be classed into one of two groups:  carbon
that is part of a compound which will be degraded biologically and carbon that
is refractory with respect to biological decomposition.  The behavior of\TOC is
described in EXPLORE by a first-order equation in a manner similar to
equation used to model CBOD behavior.                                        J
     The input data required by the TOC submodel include total organic and
refractory organic carbon concentrations in all the inflows to the estuary.
Refractory organic carbon is that fraction of the TOC which is not biologically
degradable.  Since this fraction is not directly, attainable from established
laboratory procedures, it is possible to calculate the refractory fraction
using COD data.  The procedure by which the refractory fraction of TOC is
calculated from COD determinations is presented by Baca et al . [1973b].
Nitrogen
     The relationships between the various forms of nitrogen  in natural
waters is highly complex.  Elemental nitrogen can be reduced  (nitrogen- fixa-
tion) for use in- building cells by various bacteria and blue  green algae.
Certain autotrophic bacteria will oxidize the ammonia (NFU) present in water
to nitrite (NO^-) and nitrite can be further oxidized to nitrate (NO^-).  This
process, nitrification, represents the major portion of the nitrogenous com-
ponent of BOD as discussed earlier.  In addition, the ammonia can be directly
incorporated into an organic form by either autotrophic or heterotrophic
                                     17

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organisms.  Ammonia can also escape from (or enter) the water in a gaseous
form.  The nitrate produced is available as a nutrient to many organisms which
can convert it into an organic form.  In some cases the nitrate will undergo
denitrification through biological action and be converted either to nitrite or
elemental nitrogen.  The nitrogen in organic form can be present either as part
of a living organism or as part of a nonliving organic substance (such as a
soluble organic compound or part of a decaying organism).  Nitrogen released
from the nonliving organic substances will in general return to the water in
the form of ammonia-.  A significant portion of the nitrogen in the organic form
is refractory and will not readily return to solution or re-enter the nitrogen
cycle.
     The EXPLORE model has two nitrogen submodels which represent the dominant
transformations of various nitrogen species in aquatic systems.  One submodel
considers the affects of algae (Figure 5A in the Appendix) while the second
includes only ammonia-nitrate dynamics (Figure 58 in the Appendix).  The
ammonia, nitrate, nitrite, and Kjeldahl nitrogen data obtained in the sampling
programs will be used to establish the reaction rates for these nitrogen
submodels.
     In addition to the concentration of nitrifying bacteria, pH has been
shown to be a good indicator of the occurrence of nitrification.  The oxida-
tion of ammonia to nitrite and. nitrate has an optimum pH range of 8.0 to
8.5 [Wild et al., 1971].  Nitrification can- occur, however between- 7.0 and
8.5.  If the pH is much lower than 7.0, the process will probably be negli-
gible.  Since pH will be measured at all locations, this parameter and the
concentration of nitrifying bacteria will be useful in model calibration.
Phosphorus
     Phosphorus occurs in natural waters and; in wastewaters almost solely in
the form of various types of phosphate.  These forms are commonly classified
into orthophosphates, condensed phosphates (pyro-, meta-, and polyphosphates)
and organically bound phosphates.  As with other nutrients, phosphorus cycling
is mediated by chemical, biological and even geochemical processes.  Inorganic
phosphorus is most commonly present in minerals or dissolved in water as
                                     18

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orthophosphate (PO*).   Particulate inorganic phosphates are in general  only
slightly soluble in water and are not used by aquatic life.  Complex or con-
densed phosphates are unstable in water and will  hydrolyze slowly to ortho-
phosphate.  Plants and other aquatic organisms can assimilate either dissolved
orthophosphate or soluble organic phosphate.  The biota will  excrete either
soluble organic phosphate or orthophosphate during both growth and death.  If
the soluble organic phosphate is not reassimilated it will hydrolyze to ortho-
phosphate.  Upon death of the aquatic organisms,  a certain fraction of the
phosphorus in the cells is retained in a refractory state.  Phosphorus also
interacts readily with sediment materials which can act as either a source or
sink for both organic and inorganic phosphorus compounds.
     Three phosphorus submodels are included in EXPLORE.  The first submodel
(Figure 6A in the Appendix) includes the first order reactions of soluble
phosphorus with algae and sediments.  The second  (Figure 6B in the Appendix)
is a first-order reaction model between soluble and sediment phosphorus and the
third submodel (Figure 6C in the Appendix) is a simple second-order decay model
for soluble phosphorus.  The final submodel was incorporated into EXPLORE for
situations where data are not available to evaluate the first-order model
coefficients or where the available data indicate a second-order reaction is
occurring.
     The input data required for the algae phosphorus model include the follow-
ing parameters:
  •>  soluble inorganic phosphorus (orthophosphate)
  *  sediment phosphorus
  *  organic phosphorus
The laboratory procedures used in analyzing phosphorus compounds have to be
carefully selected to insure the proper separation of total phosphorus into its
various components for use in modeling.  Soluble inorganic phosphorus is the
"filtrable" fraction of orthosphosphate.  Standard Methods recommends the use
of a 0.45-um membrane filter to separate filtrable from particulate forms.
Sediment phosphorus in EXPLORE refers to the inorganic phosphate bound on both
suspended and bed sediment materials  (i.e., total particulate orthophosphate).
The organic phosphorus component consists of filtrable and particulate (i.e.,
total) organic phosphate.

                                      19

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     As in the case of the nitrogen reaction coefficients,  the rate of ortho-
phosphate uptake by algae can not be readily determined independently of model
calibration.  Phosphorus data are also required at each of  the subestuary
sampling locations in order to calibrate the soluble inorganic phosphorus-
sediment phosphorus reaction rates and the organic phosphorus-soluble phos-
phorus reaction rate.
Dissolved Oxygen
     Dissolved Oxygen concentrations in estuaries are influenced by a variety
interrelated factors.  The most important factors include:
  •  water temperature
  •  bacterial oxidation of organic matter
  *  nitrification
  •  algal photosynthesis and respiration
  •  reaeration
The first factor, water temperature, is an input to the EXPLORE model which
controls the maximum amount of oxygen which can be contained in water under
equilibrium conditions (i.e., dissolved oxygen saturation).   Water temperature
also influences the rates at which the next three factors deplete oxygen from
water.  The submodels related to the bacterial oxidation of organic matter and
nitrification are coupled to the DO submodel and were discussed earlier in
this section.
     The modeling of algae photosynthesis and respiration is inherently com-
plex because of the heterogeneity of algal populations and  the myriad of
interacting environmental factors which influence algal dynamics.  For example,
algae growth rates are complex functions of a large number  of environmental
parameters such as temperature, pH, nutrient conconcentrations, irradiance,
and the presence of trace minerals.  In addition, the effects of these para-
meters on the algae growth rates vary widely from one type  of algae to another.
Algae are also part of a complicated food web which is difficult in itself
to model.
                                     20

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     In EXPLORE, algae have been separated into two categories, 1) planktonic
(unattached) algae, and 2) sessile (attached) algae.  Sessile algae, attached
plants, and other micro- and macro-organisms that reside on the bottom of the
water course have been collectively classified as benthic organisms.
     The diurnal changes in dissolved oxygen caused by algal photosynthesis
and respiration are simulated two different ways in EXPLORE.  The first approach
involves modeling oxygen production from both attached algae and aquatic plants
and unattached algae-independent of algal growth.  Two sinusoidally varying
terms are used to represent diurnal variations in photosynthesis and respira-
tion.  The maximum rates of photosynthesis and respiration are calibrated by
comparing predicted and measured dissolved oxygen concentrations.  This approach
has been found to be fairly reasonable as long as all the other factors affect-
ing 00 variations have been determined.  In using this approach, diurnal varia-
tions in photosynthesis and respiration are assumed to be constant from day
to day.
     In order to incorporate algal growth directly  into the modeling of photo-
synthesis and respiration, a second approach can be used.  This approach couples
phytoplankton (unattached algae) density to the time varying equation described
above.  Phytoplankton growth using this approach is a function of nutrient
(nitrogen and phosphorus) availability, sunlight, temperature, zooplankton
grazing and death due to other causes such as toxic materials.  Water depth
and temperature, the extinction coefficient and phytoplankton and zooplankton
concentrations  in the inflows are  input to EXPLORE and the concentration of
these species in the water column  are- used to calibrate growth and death        \
                                                                        )       _e-)Cln- order to cali-
brate the coefficients of" the reaeration equations, dissolved, oxygen data
at each sampling location in the subestuary are required.  Following the
calibration of these coefficients, DO data are also used to evaluate the model's
capabilities to simulate dissolved oxygen variations under different hydrologic
and water quality conditions.


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                             ce_   cctfk^

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Carbon Cycle
     The cycling of organic and inorganic carbon compounds in natural  waters
is similar to the cycling of other nutrients in that inorganic carbon  is incor-
porated into organic carbon which is subsequently mineralized into inorganic
carbon.  The majority of the carbon in aquatic systems occurs as equilibrium
products of carbonic acid.  Atmospheric carbon dioxide (002)  dissolves in
water and forms carbonic acid (H-CO-j) which dissociates into  various
inorganic species (i.e., C02, HCO," and CO-").  The complex dissociation
reactions of carbonic acid are well understood and tend to be highly dependent
upon pH.
     Synthesis of organic matter by photosynthesis of algae and submersed
aquatic macrophytes requires an abundant and readily available source  of
inorganic carbon.  Abundant physiological evidence indicates  that free C02
is most readily utilized by nearly all algae and larger aquatic plants.  Many
algae and aquatic vascular plants are capable of assimilating bicarbonate
(HCO^") ions when free COo is in very low supply.  There is no clear evidence
that algae or higher aquatic plants assimilate C0o~ directly  as a carbon
source.
     Microbial decomposition of organic materials replenishes the inorganic
carbon pool.  The dominant sources of organic carbon, other than the dissolved
and organic matter which enters estuaries from various inflows, are cellular
constituents of organisms at death and secretions from actively growing algae
and large aquatic plants.  The rate of" decomposition of these substances is
a function of their concentration and of the activity level of the bacteria.
     The soluble organic matter synthesized by planktonic production and
released by secretion and. death decompose fairly rapidly at the site of
generation and release.  Particulate organic materialsr however,, undergo
much slower degradation.  As a result, particulate organic carbon can reach
the sediment interface prior to complete degradation.  The amount of this
material which reaches the bottom is a function of the depth  of the estuary
and the time required for decomposition.  Once particulate organic materials
are incorporated into the bed sediments  they are transformed into inorganic
materials through bacterial activity.

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     The characterization of the carbon cycle in each subestuary requires
the sampling of various inorganic species of carbon and organic carbon in
the inflows to each subestuary and within each subestuary.  These data will
provide a basis for characterizing both the short-term (i.e., diurnal) and
long-term (i.e., seasonal) fluctuations in carbon.
                                     23

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                        GENERALIZED SAMPLING PROGRAM

SAMPLING METHODOLOGY
     The overall  objective of the sampling program is to collect data on the
physical, chemical, and biological characteristics of the four aforementioned
subestuaries for the calibration and verification of various water quality
models.  Many of these models will be intertidal, that is,, they will be capable
of simulating real  time variations in water quality parameters.  Thus, for
calibration purposes, both seasonal and tidal cycle variations of the selected
parameters are of importance.  In developing the generalized program it was
deemed necessary to conduct a minimum of two intensive sampling programs
annually, accompanied by less intensive trend monitoring on a monthly basis.
Intensive Sampling Programs
     The intensive sampling programs are designed to provide longitudinal,
lateral and vertical variations of the previously discussed parameters over two
consecutive tidal cycles of approximately 25 hours duration.  Sampling over two
tidal cycles should be conducted because of the mixed-semidiurnal nature of the
tides in Chesapeake Bay, i.e., two high waters and two low waters occur during
a tidal day where an inequality exists between the two high and two low waters.
     A minimum of two intensive sampling programs should be conducted in each
subestuary per year to represent high and low freshwater discharge conditions
in Chesapeake Bay.  High discharge conditions generally occur during the months
of February through April and low discharge conditions occur from June to
October.  If possible, the high discharge sampling program should coincide
and preferably just follow a major storm event so that the nonpoint source
sampling programs carr be integrated, with- the subestuary program.
     As will be-discussed subsequently the intensive sampling programs will be
comprised of a number of sampling  transects along the estuarial reaches of  the
subestuaries.  The  transects will  consist of one  to three stations  in the
lateral direction and from one to  three sampling depths.  Generally, in the
broader lower reaches of the subestuaries three stations will be required to
represent conditions occurring in  the main flow channel and adjacent channel
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                                                                    «£^JK  C-S.-0

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margins and subtidal flats.  Multiple depth sampling to represent near-bottom,
mid-depth and near surface conditions will also be necessary in much of the
lower saline portions of the subestuaries because of the possibility of the
layered flow characteristics.  In the upper freshwater tidal portions of the
subestuaries the lateral and vertical dimensions become less important because
of the general lack of extensive channel margins and subtidal flats, and due
to the lack of layered flow characteristics.  Thus, in the freshwater tidal
portions of the subestuaries one sampling location in the cross-section and
one sampling depth is often sufficient to represent conditions occurring along
the transect.
     Ideally all transects within a subestuary should be sampled simultaneously
during each intensive sampling program to represent conditions occurring
during a set time frame of two tidal cycles.  However, this is often not
possible because the large number of transects and stations require too much
equipment and funding limitations are generally present.  As a substitute it
is often appropriate to use a limited number of vessels to sample individual
transects during succeeding tidal cycles, provided that conditions such as
freshwater discharge, water surface elevation variations, and meteorological
conditions, vary only within allowable limits during the entire sampling
period.
Trend Monitoring
     Trend monitoring of selected sampling parameters should be conducted on a
monthly basis along the- longitudinal axis of the subestuaries.  Trend monitor-
ing should be- conducted- on either high or low water slack following the same
tidal cycle during the duration of the trend monitoring program for each sub-
estuary.  As long- as: the general hydrodynamic and meteorological conditions
remain relatively constant, the data obtained from each longitudinal station
will be comparable irr terms of tidal cycle variations.
     Trend monitoring data will be used to track changes in the sampling
parameters between the intensive sampling programs and also to correlate
changes between adjacent transects.  Except in the lower deep portions of the
subestuaries one sampling depth in mid-channel should be sufficient for
correlation- of trend monitoring data.  However, where two or three layered
                                     25

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flow regimes exist,  two or three depths  will  have to be sampled due to the
large vertical  and longitudinal  variations that will  be encountered throughout
the year.
SAMPLING PROCEDURES
     The intensive sampling and  trend monitoring programs as discussed above
are designed to provide comprehensive tidal  cycle conditions on a seasonal
basis and slack water conditions on a monthly basis, respectively.   Sampling
procedures for the intensive sampling programs will  consist of the selection
of specific transects, stations, and depths;  locating the sites in  the field;
selection of sampling frequencies for collection of water quality parameters;
conducting a bathymetric survey; collection of water quality data;  and sample
preservation and handling.  The  following is  a brief discussion of these pro-
cedures.
Site Selection
     A number of considerations  should be evaluated in selecting the transects
to be sampled during the intensive sampling program.  Foremost is that the
number of transects  be great enough and  the transects be so located as to give
complete coverage of the estuary.  Modeling considerations are also important
in the selection of the number and location of transects.  The distance between
transects should not be shorter than the distance between model computation
points.  However, it is not necessary in most cases to sample at every computa-
tion point.  Two mandatory areas to establish transects are the upper and
lower open boundaries, i.e. r the mouth of the estuary and the head-of-tide.
Transects should also be established at the junctions of major tributaries
even if they are not to be modeled.  Another important area to establish
transects is the null zone (turbidity maximum), if such an- area exists,
because this is the transition area between the tidal salt water and tidal
freshwater portion of the estuary where the most radical physical and chemical
changes occur.  Other considerations for the selection of transect locations
are:  1) the transect should be located in a fairly straight length of chan-
nel, 2) locate transects in known areas of large fluctuations in water quality
parameters, and 3) areas of high contaminant inout such as industrial and
municipal discharges.  A "rule of thumb" for determining distance between
                                     27

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transects is that the distance be equal  to the length of one tidal  excursion.
However, where the estuary is very long  this method of selecting distances is
often not possible.
     Station locations along a transect  and selection of sampling depths are
important in order to distinguish lateral  and vertical  changes in water quality
parameters-  Along the main stem in the lower portion of the estuary multiple
cross-channel stations and depths should be established because of the vast
differences in the cross-channel bathymetry and because of the possible pre-
sence of a multi-layered flow regime.   Three cross-channel stations are nor-
mally sufficient to characterize the lateral variations' in water quality para-
meters; one station located in the deeper main flow channel and one each on the
adjacent channel margins or subtidal flats.  Three sampling depths in the main
flow channel and one or two depths on the channel margins or subtidal flats
should be sufficient to characterize ttie vertical variations.  In the tidal
freshwater portion of the estuary and secondary estuary stems, one station in
the lateral and one depth will normally  be sufficient for characterizing physi-
cal, chemical and biological conditions.
Site Location in the Field
     Locating sampling stations in the field and properly documenting the
locations is of prime importance so that the stations can be re-established
with a great deal of accuracy during subsequent sampling periods.  Where
possible, the transects should be located between prominent shore features
such as a promontorie or where abrupt changes irr topography occur, or where
identifiable man-made structures exist.   Locating stations near navigation aids
is very helpful in relocating these stations at later times.  In the absence of
navigation- aids horizontal control methods will have to be used in locating
stations„  The best method; for horizontal control is the use of electronic
positioning equipment such as a range-range instrument.  In lieu of this,
horizontal control in locating sampling stations can be established using
three-point sextant triangulation, Loran, or radar.  The minimum accuracy for
station relocations should be about ±15 m.
                                     23'

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Sampling Frequencies
     No consideration need be given to sampling frequencies of individual
parameters during each of the trend monitoring sampling periods since these
samples will represent only one point in time, i.e., slack water conditions.
Sampling frequencies for each physical, chemical, and biological parameter are
given in Tables 1, 2 and 3.  The frequencies presented in these tables were
selected on the basis of possible temporal variations in each parameter over
a tidal cycle, the length of time required to collect the sample and the total
number of samples.
              TABLE 1.   Sampling Frequencies for Physical Parameters
        Description of Parameters
       Bathymetric Survey
       Tidal Stage
       Current Velocity and
       Direction
       Freshwater and Point Source
       Di scharge
       Wave Height, Period, and
       Direction
       Salinity
       Water Temperature
       oH
       Suspended Sediment Load.
       Bed; Sediment Characteristics
         Particle Size Distribution-
                                            Sampling Frequencies
                                         for Each Depth or Station
Intensive
Sampling
Annually
Continuous
30 Minutes
Hourly
Hourly
Hourly
Hourly
Hourly
Hourly
Trend
Monitoring
___
—
—
Daily Average
Monthly
Monthly
Monthly
Monthly
Monthly
Onca
Monthly
Sathymetric Surveys
     Bathymetric surveys using a high frequency, continuous recording fatho-
meter should be conducted at each transect at least on an annual basis.  This
depth data will be used for comparison with the hydroqraphic charts of the area
                                    Z9

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           TABLE 2.   Sampling Frequencies for Chemical  Parameters
                                           Sampling Frequencies  for
                                            Each Depth or Station
          Description of Parameters
        Ultimate Carbonaceous BOD
        Benthic Carbonaceous BOD
        Total Organic Carbon
        Chemical Oxygen Demand
        Alkalinity
        Bed Sediment Carbon Content
        Ammonia-Nitrogen^ '
        Nitrite-Nitrogen
        Nitrate-Nitrogen
        Kjeldahl-Nitrogen'
        Total Phosphate
        Total Orthophosphate
        Total Filtrable Phosphate
        Filtrable Orthophosphate
        Bed Sediment Phosphate Content
        Dissolved Oxygen
0)
(1)
,0)
Intensive
Sampling
Hourly
Once
Hourly
Hourly
Hourly
Once
Hourly
Hourly
Hourly
Hourly
Hourly
Hourly
Hourly
Hourly
Once
Hourly
Trend
Monitoring
Monthly
Monthly
Monthly
Monthly
Monthly
Monthly
Monthly
Monthly
Monthly
Monthly
Monthly
Monthly
Monthly
Monthly
Monthly
Monthly
        NOTE:
        1.   Fi 1tered and unfi 1 tered

and for computations of cross-sectional  areas.   Horizontal  control  in these
bathymetrfc surveys is an- important aspect because of their use in determining
the cross-sectional areas.   These depth- soundings should be referenced to some
datum such as mean low water or mean sea level, requiring- the strategic place-
ment of tide gages within the estuaries.
Data Collection
     Detailed data collection procedures need not be developed herein.   All
stations on a particular transact should be manned during the same tidal cycle,
                                     30

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         TABLE 3.   Sampling Frequencies  for Biological  Parameters
                                           Sampling  Frequencies  for
                                            Each  Depth  or Station
                                           IntensiveTrend
           Description  of Parameters        Sampling       Monitoring
Phytoplankton Concentration
Zooplankton Concentration
Secchi Disk Depth
Nitrifying Bacteria Enumeration
Twi ce
Twi ce
Hourly
Once
Monthly
Monthly
Monthly
Monthly
requiring the use of at least three fully equipped vessels  during most of the
intensive sampling program.   Multiple casts of water samples at the designated
depths should be taken simultaneously and multiple depth current sensors  should
be used if possible.   If it  is not possible to collect data at all  depths
simultaneously, consecutive  samples should be collected beginning at the  near
surface or near bottom depth and progressively working downward or upward.
Data from each depth should  be collected within a set time  frame with no
deviations.
Sample Preservation and Handling
     Instant analyses of the water quality parameters previously discussed is a
practical impossibility, therefore preservation methods should be employed
to retard any reactions which tend to alter the sample.  Preservation methods
are generally limited, to pH  control, chemical addition, refrigeration, and
freezing.  The U.S. Environmental  Protection Agency, Environmental  Monitoring
Support Laboratory (EMSL) [Methods for Chemical Analysis of Water and Waste,
1974] has compiled, a list of recommendations for preservation of samples
according to the measurement analysis to be performed.  Table 4 is a summary  of
applicable water quality parameters.
     Proper sample handling includes correct sample container labeling and
documentation.  Each sample container should have a designation that uniquely
distinguishes it from all other samples.  Water-proof labels and indelible ink
should be used in marking sample containers.  Field sampling logs, similar to
the example field log shown  in Figure 2 should be prepared  as part of the
documentation of sample collection.
                                      31

-------
        TABLE 4.   Recommended  Preservation Methods
(1)
                       Volume
    Measurement
Required
(ml)
1000
50
300
300
400
500

500

100

50
25

25


50
50

50
50

100
100
1000
Container
P, G<2>
P, G
G only
G only
P, G
P, G

P, G

P, G

P, G
P, G

P, G


P, G
P, G

P, G
Pi*
Ij

P, G
P, G
P, G
Preservative
Cool, 4°c
H2S04 to pH <2
Determine Onsite
Fix on Site
Cool, 4°C
Cool, 4°C
H2S04 to pH <2
Cool, 4°C
H2S04 to pH <2
Cool, 4°C
H2S04 to pH <2
Cool, 4°C
Cool, 4°C
H2S04 to pH <2
Cool, 4°C
Determine Onsite
Filter on Site
Cool, 4°C
Cool, 4°C
H2S04 to pH <2
Cool, 4°C
Filter on Site
Cool, 4°C
Cool, 4°C
Cool, 4°C
Determine Onsite
Holding
Time(S)
o hr
7 days
No Holding
4-8 hr
24 hr
7 days





24 hr
24 hr

5 hr^


24 hr
24 hr

7 days
24 hr

7 days
1 A '«*•*'
£,*» fir
No Holding
300

COD

Dissolved Oxygen

  Probe-

  Winkler

Ni troqen

  Ammonia

  Kjeldahl


  Total


  Nitrate


Nitrite

Organic Carbon


PH


Phosphorous

  Ortnophospnate,
  Dissolved

  Hydrolyzable


  Total

  Total, Dissolved


Suspended Solids

Specific Conductance

Temperature-


NOTES:

  1.  Taken- from- ENSL (1974).
  2.  Plastic or glass
  3.  If samples can not be returned  to the laboratory in less than 5 hr
     and holding time exceeds  this limit, the final reported data should
     indicate the holding  time.
  4.  If the sample is stabilized  by  cooling, it should be warmed to 25°C
     for reading, or temperature  correction made and results reported at
     25°C.
  5.  It has been- shewn that samples  orooerly oreserved may be held for
     extended periods Deyond  the  recommended holding time.
                                   32

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-------
                         SPECIFIC SAMPLING PROGRAMS

   •  The sampling programs for the four subestuaries of Chesapeake Bay described
in this section have been designed without specific regard to available fund-
ing limitations.   However, certain constraints were adhered to in the design
which ultimately would decrease the costs.  The principal  constraint is that
of time.  The sampling programs have been developed on the basis of a maximum
of 10 days field effort for each intensive sampling program, using three
sampling vessels.  These sampling vessels must be large enough to operate
undermost meteorological conditions, but be of shallow enough draft to navi-
gate in some of the.shallower areas.  Four intensive sampling periods have
been recommended for each subestuary in order to obtain data from two high
and two low freshwater discharge conditions over a two year period.  For
model calibration and evaluation purposes it may be possible to decrease the
number of intensive sampling periods to three, but this is not recommended
because of the possibility of required changes in the sampling program as
a result of experience gained during the first intensive sampling program.
     Transect locations and number and locations of sampling stations and
depths were based on the geography of the subestuary, variations in cross-
channel bathymetry, and width of the estuary at a particular transect.  Cross-
channel stations have been limited to a maximum of three on the basis that
three vessels may man one transect simultaneously.  Generally, it will be
found that in the lower portions of the subestuaries three stations and three
depths have been established along each transect.  In the upper saline regions
of the estuary where the channel is narrower and there is a lack of extensive
channel margins and subtidal flats, the number of stations and depths per
transect will generally decrease.  In the tidal freshwater region and secon-
dary stems the number of stations and depths are generally limited to one each
because of the narrowness of the waterway and uniform shallow conditions.
     The location of specific sampling stations for point sources of pollution
and freshwater discharges to each subestuary have not been identified.  The
States of Maryland and Virginia will be responsible for selecting the waste
                                     35

-------

-------
loads and tributaries to be sampled based on their local knowledge of the
relative impact these inflows have on subestuary water quality.
     The specific sampling programs for each of the four subestuaries are
described below.  Included in each description are the recommended locations
for sampling transects and stations as well as the number of depths to be
sampled at each station.  Also included are tables summarizing the total num-
ber of samples which have to be taken of each physical, chemical, and biologi-
cal parameter during the intensive and trend monitoring programs.  The num-
bers shown represent either samples per intensive program or samples per year
of trend monitoring.  This information will help the States of Maryland and
Virginia in estimating the costs of subestuary sampling.

CHESTER RIVER, MARYLAND
Site Description
     The Chester River, shown in Figure 3, is located in northeastern
Chesapeake Bay  in the State of Maryland.  The main course of the Chester River
is approximately 51 miles long with a watershed covering about 440 sq_mi.  The
boundary between tidal and nontidal water lies at Cypress Point near Millington,
Maryland some 42 mi upstream from the mouth of the river.  The mouth of Chester
River opens between Eastern Neck and the north end of Kent Island (Love Point).
In addition to  this main connection to Chesapeake Bay, the Chester River also
communicates with Eastern Bay to the south through Kent Narrows.
     The Chester River has a rather sinuous course and is quite broad in its
lower reaches.  The main river channel is fairly deep, averaging well over
20 ft in the lower reaches.  The main river channel consists of a series of
deep basin-liker depressions on- the order of 50 to 60 ft. in depth and are
separated by shallower areas 20 to 40 ft deep.  The river channel is flanked
by extensive subtidal flats, extending to a depth of about 6 ft, and channel
margins extending from 6 to 20 ft in depth-.  In the lower reaches of the
Chester River these subtidal flats and channel margins encompass from 40% to
50% of the water surface area.  In the upper reaches they are much more exten-
sive and cover  up to 80% of the surface water area.
                                     36

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-------
                                                       i.
                                                       
-------
     The lower wide portion of the Chester River results from the junction of
three major tidal  streams, the West Fork and East Fork of Langford Creek, and
the Corsica River.   Langford Creek is a large watershed of approximately 40 sq
mi.  About 2 mi above its mouth it divides into two stems, the West Fork and
East Fork.  The Corsica River is a large tidal  estuary which drains about
36.3 sq mi.  Southeast Creek, another large- tributary of the Chester River
lies on the eastern bank between the headwaters area and the Corsica River.
Its drainage area is about 55 sq mi.
     The volume of the Chester River has been calculated to be approximately
19.6 billion ft  [Chester River Study, 1972] and the surface area is about
               2
1.55 billion ft .   The mean annual discharge of the Chester River into
Chesapeake Bay is estimated to be about 450 ft /sec.  The highest flow rates
generally occur from February to April and the lowest from June to October.
     The Chester River, like most of the major tributaries of Chesapeake Bay,
is classified as partly-mixed.  In this type of estuary the vertical salinity
distribution is neither completely uniform nor segregated sharply into a
highly saline bottom water overlain by freshwater.  The Chester River estua-
rine system generally has a multi-layered circulation pattern, tending toward
two-layered flow with upstream flow predominance of bottom waters and down-
stream flow predominance of surface waters.
Sampling Site Locations
     Recommended, transect locations and number of sampling stations and depths
for the intensive sampling program are given in Table 5 and shown in Figure 4.
Eleven transects are located on the main stem of the Chester River, two
transects on Grays Inn Creekr four transects on Langford Crsek, two transects
on Corsica River and one transect is located on Southeast Creek.  There is a
total of 31 sampling stations and 68 discrete sampling points.  The trend
monitoring station locations should consist of collecting one slack water
sample in mid-channel and at mid-depth at aach of the- 20 transects.  Table 6
gives the total number of samples required for each intensive program and
year of trend monitoring on the- Chester River.
                                     38

-------
TABLE 5.   Chester River Sampling Locations
Location of Transect
Main Stem Chester River
Love Pt. to Eastern Nk.
Long Pt. to Narrows Pt.
Belts Bar Pt. to
Piney Pt.
Nichols Pt. to
Hoi ton Pt.
Quaker Neck Ldg.
Wi liner Pt.
Chestertown
Travilla Whf.
C romp ton
Millington
Grays Inn Creek
Little Gum Pt. to
Grays Inn Pt.
Browns Pt.
Lanqford Creek
Grays Inn Pt. to
Nichols Pt.
Island Pt.
Hawbush Pt.
Longmarsh Pt.
Corsica River
Town Pt.
Fort Pt.
Southeast Creek
Deep Pt.
TOTAL
Approximate
River Mile
(N.M.)

0.0
4.0
7.2
11.0
15.0
18.5
22.4
26.9
30.0
T3 n
JO . U
36.5
9.5
0.0
1.4
10.5
0.0
2.0
2.3
3.4

0.5
1.7
18.8
0.0

Number of
Stations

3
3
3
3
2
2
2
1
1
i
1
1

1
1

1
1
1
1

1
1

J_
31
Number of
Sampling
Depths

3,3,3
3,3,3
3,3,3
3,3,3
3,2
3,2
3,2
1
1
i
1
1

1
1

3
1
1
1

3
1

1 	
68
                                                        9
                                                        5
                                                        5
                                                        5
                                                        1
                                                        1
                                                        1
                                                        1
                                                        3
                                                        1
                                                       68
                     39

-------
                                                       01
                                                       
-------
TABLE  6.   Total  Number  of Samples  Required on  the Chester  River
             Per  Intensive Program or Per Year of Trend Monitoring
       Description of Parameters
   Physical Parameters
     Sathymetric Survey
     Tidal Stage
     Current Velocity and  Direction
     Freshwater and Point  Source
     Discharge
     Wave Height, Period and
     Direction
     Salinity
     fat&r Temperature
     pH
     Suspended Sediment Load
     Bed Sediment Characteristics
   Chemical Parameters
     Ultimate Carbonaceous 300
     Sentnic Carbonaceous  300
     Total Organic Carbon
     Chemical Oxygen Demand
     Alkalinity
     3ed Sediment Carbon  Content
                     ^4'0'
      Ammonia-Nitrogen
      Nitrite-nitrogen
                     '4'5'
Total  Phospnate1
Total  Orthopnosphate
                         (5)
  Total  Filtrable Phosohate^  '
                         (4.)
  Filtrable Orthophospnate
  Bed Sediment Phosonate Content
  Dissolved Oxygen-
31ological Parameters
  Phytoplankton Concentration
  Zooolanktorr Concentration
  Secchi  Disk Depth
  Vitrifying  3acteria
  Enumeration(S)
."umLar Per
intensive
Prcaram
(D
(2)
3400
(3)
500
1700
1700
1700
1700
31
1700
31
1700
1700
1700
31
3400
3400
3400
3400
1700
1700
1700
1700
31
1700
52
52
775
'lumbar Per
Year of Trend
Von i tori no

—
53
—
ZQ
S3
53
5S
53
31
63
31
53
S3
53
31
136
136
136
136
53
53
53
53
31
53
31
31
31
                                             52
                                                       31
    .NOTTS:
    1.   -sr^rm once  /early
    2.  Continuous  same ling recommended
    3.   To  be Identified by the State of  Maryland
    i.   Filtered
    5.   Jn filtered
    5.   in  trie *atar  column and bed sediment
                                       41

-------
PATUXENT RIVER,  MARYLAND
Site Description
     The Patuxent River, shown in Figure 5,  is located along the western shore
of Chesapeake Bay in the State of Maryland.   The overall  length of the Patuxent
River is 110 miles.   The Patuxent River watershed is approximately 930 sq mi
and encompasses  the metropolitan regions of  Baltimore, Maryland and Washington,
O.C.  Tidal influence of the Patuxent River extends to Hardesty, Maryland near
Route 214, about 55 mi above the mouth.  Saltwater occasionally reaches Lyons
Creek, about 35  mi above the mouth.
     The average discharge of the Patuxent River at its mouth is about 1078 cfs.
The discharge varies from 55 cfs to 6930 cfs.
     The tidal portion of the Patuxent River can be characterized into three
hydrodynamic systems.  Between Hardesty and  Lyons Creek,  the river is tidal
freshwater.  Between Lyons Creek and Sheridan Point the system is estuarine,
being subject to tidal action and salinity gradients.  Below Sheridan Point
the Patuxent River has been described as an  embayment of Chesapeake Bay, i.e.,
it is chemically similar to and hydrodynamically driven by the bay [Patuxent
River Program, 1978].
Sampling Site Locations
     Recommended transect locations and number of sampling stations and depths
for the intensive sampling program are given in Table 7 and shown in Figure 6.
Twelve transects are located on the main stem of'-the Patuxent River and two
each are located on Saint Leonard Creek, Battle Creek and Western Branch.
There are a total of 30 sampling stations and 60 discrete sampling points.
The trend monitoring station- locations should consist of collecting one
slack water sample in mid-channel and at mid-depth at each of the 18 transects.
Table- 8 gives: the* total number of samples required for each intensive program
and each year of trend monitoring on- the Patuxent River.

-------
FIGURE 5.   Patuxent River
           43

-------
TABLE 7.   Patuxent River Sampling Locations
Location of Transect
Main Stem Patuxent River
Fishing Pt. to Drum Pt.
Half Pone Pt. to
Hoopers Neck
Captains Pt. to
Broomes Island
Sheridan Pt.
Chalk Pt. to Gods
Grace Pt.
Cocktown Cr.
Jones Pt.
Lyons Whf.
Queen Anne Bridge
Route 214 Bridge
St. Leonard Creek
Rodney Pt.
Johns Creek
Battle Creek
Prison Pt.
Long Cove
Western Branch



TOTAL
Approximate
River Mile
(N.M.)

0.0
5.2
9.8
15.8
21.0
26.5
31.0
35.0
&/) £
*rC • O
47.5
m n
J 1 . U
55.0
8.0
0.5
2.5
13.3
0.0
0.5

n n
u • u
7 n
U . U

Number of
Stations

3
3
3
3
3
1
3
1
1
i
i
1

1
1

1
1

i
1
1
I
30
Number of
Sampling
Depths

3,3,3
3,3,2
3,3,3
2,2,3
3,2,1
3
1,3,1
1
i
i
1
1
i
1

3
1

1
1

1
1
(
50
Total Number
of Sampling
Points

9
8
9
7
6
3
5
1
» 1
1
i
i
1

3
1

1
1

1
i
1
60
                    44

-------
FIGURE 6.   Recommended Sampling Locations
           Patuxent River

-------
TABLE  8.   Total  Number  of  Samples  Required on the  Patuxent River
             Per Intensive Program or Per Year  of  Trend Monitoring
    Description of Parameters
Physical  Parameters
  Satnymetric Survey
  Tidal  Stage
  Current Velocity and Direction
  Freshwater and Point Source
  01scharge
  Wave Height, Period, and
  Direction
  Salinity
  Water Temperature
  pH
  Suspended Sediment Load
  3ed Sediment Characteristics
Chemical  Parameters
  Ultimate Carbonaceous 300
  Sentnic Carbonaceous SOD
  Total  Organic Carton
  Chemical Oxygen Demand
  Alkalinity
  Sed Sediment Carbon Content
  Ammonia-Nitrogen'4'3'
  Nitrate-Nitrogen'*'0'
  N1tr1te-Ni trogen'*'3'
  Kj el dan 1-Nitrogen'
  Total  Phosphate'
                     / e\
  Total  Orthophosphatav
  Total  riltrable Phosphate'
                         i 4)
  riltraole Ortnoonosofiats'
  3ed Sediment Phosphate Content
  Dissolved Oxygen
Biological Parameters
                                      .'.*)
              Phytoplanfcton Concentration-
              Zooplanlcton Concentration-
              Secctii Disk Death
              Nitrifying Sactaria.
              Enumeration! 5)
Number Per
Intensive
P^oaram
(1)
(2)
3000
(3)
450
1500
1500
1500
1500
30
1500
30
1500
1500
1500
30
3000
3000
3000
3000
1500
1500
1500
1500
30
1500
60
60
750
Numoer Par
Year of Trend
tfonitorina

—
60
—
18
60
50
50
50
30
50
30
50
50
50
30
50
30
50
SO
50
50
50
50
30
50
30
30
30
                                          50
30
            .NOTES:
                Perform onca yearly
                Continuous sampling  recommended
                To be determined  3y  :tie State of '
                Filtered
                Unfiltered
                In the water column  and sed saaiment

-------
POQUQSON RIVER,  VIRGINIA
Site Description
     The Poquoson River shown in Figure 7, is located on the southwestern
shore of Chesapeake Bay in the State of Virginia.   The Poquoson River is a
small coastal basin between two large estuarine systems, the James River to
the south and the York River to the north.  The drainage area of the Proquoson
River is small and the topographic relief is slight, resulting in the lack of
free flowing circulation such as is typical  with the larger estuaries.  The
Poquoson River has a dendritic pattern with  many smaller distributaries enter-
ing it.  The distributaries are drowned or flooded by Chesapeake Bay waters,
as is the Poquoson River and, therefore, are greatly influenced'by the tidal
circulation of Chesapeake Bay.  The Poquoson River is dammed approximately
5 mi upstream of the mouth.  Much of this water is diverted for water supply
purposes, so during parts of the year freshwater flow is nonexistent.  Because
of the low freshwater inflow, tidal mixing will generally be the primary cir-
culation process, the longitudinal salinity gradient will be mild and the
vertical stratification is often nearly eliminated.
     The Poquoson River is very shallow, generally less than 12 ft in depth.
The two principle distributaries are Chisman Creek on the north side of the
basin and Bennett Creek on the south side.
Sampling Site Locations
     Recommended transect locations and number of sampling stations and depths
for the intensive sampling program are given in Table 9 and shown in Figure 8.
Eight transects are located on the main stem of the Poquoson River, and three
transects each are located on Bennett and Chisman Creeks.  There are a total
of 19 sampling stations and 39 discrete sampling points.  The trend monitor-
ing station  locations should consist of collecting one  slack water sample in
mid-channel  and at mid-depth at each of the 14 transects.  Table 10 gives
the total number of samples which have to be collected  for each intensive
program and year of trend monitoring on the Poquoson River.
                                    47

-------
                                                      s.
                                                      O>
                                                      c
                                                      O
                                                      (/I
                                                      O
                                                      3
                                                      CT
                                                      O
                                                      Q_
                                                      LU
                                                      Of
48

-------
                 TABLE  9.   Poquoson  River  Sampling  Locations
Location of Transect
Main Stem Poquoson
York Pt. to Cow 1
Hunts Pt.
Hunts Whf.
Lambs Creek
Hunters Creek
Quarter March Creek
Moores Creek
Mill Farms
Bennett Creek
Bay Pt. Buoy #4
Buoy #8
Floyds Bay
Chisman Creek
Ship Point
Buoy #6
TOTAL
WARE RIVER, VIRGINIA
Site Description
Approximate
River Mile
(N.M.)

0.0
1.3
1.8
2.2
2.6
3.1
3.4
4.4

0.2
0.6
1.0
1.0
0.0
n 5
U. 3
1.4



Number of
Stations

3
2
2
2
1
1
1
1

1
1
1

1
1
i
J_
19


Number of
Sampling
Depths

3,3,3
3,3
2,2
2,2
1
1
1
1

3
2
1

3
?
c~
] 	
39


Total Number
of Sampling
Points

9
6
4
4
1
1
1
1

3
2
1

3
2
c*
J_
39


     The Ware River shown in Figure 9 is a small  coastal  basin within Mobjack
Bay on the southwestern shore of Chesapeake Bay in the State of Virginia.   The
Ware River from the mouth to Deacons Neck, a distance of about 6 mi,  is gener-
ally under the influence of Chesapeake Bay tidal  waters.   The freshwater
discharge of the Ware River is small, the average discharge at the Beaverdam
Swamp gaging station being 7 cfs.   During high freshwater discharge conditions
it is likely that a two-layered circulation pattern exists in the tidal por-
tions of the Ware River.
                                      49

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                                                         j.
                                                         
-------
TABLE  10.   Total  Number  of  Samples  Required  on  the  Poquosson River
              Per Intensive Program or Per Year of  Trend Monitoring
               Description of Parameters
           Physical  Parameters
             Sathymetric Surrey
             Tidal  Stage
             Current Velocity and Direction
             Freshwater and Point Source
             01 scharge
             Wave Height, Period, and
             Direction
             Salinity
             Water Temperature
             pH
             Suspended Sediment Load
             3ed Sediment Characteristics
           Chemical  Parameters
             U1 timate Carbonaceous 300
             3enthic Carbonaceous 300
             Total Organic Carbon
             Chemical Oxygen Demand
             Alkalinity
             3ed Sediment Carbon Content
                            .(4,5)
             Ammonia-iMi trogenl
             Nitrata-Nitrogen1-
                             (1,5)
  Nitrite-Mitrogen^*'5'
  Kjeldahl-Nitrogen^ >3
  Total  Phosphate^5'
  Total  Orthophosphate'
  Total  "iltra&le Phosphate^ '
  "iltrable Orthopnosphate•
  3ed Sediment Phosphate Content
  Dissolved Oxygen-
Biological Parameters
  Phytoplankton Concentration
  Zooplankton Concentration
  Seccni  Qisk Oepth
  Nitrifying Sacteria
  inumerarloniS)
Number Par
Intensive
Proaram
nj
(2)
1950
(3)
350
975
375
975
975
19
975
975
975
975
975
19
1950
1950
1950
1950
975
975
975
975
19
975
33
28
47?
?lumoer Per
Year of Trend
Monitorinq

—
39
—
14
39
39
39
39
19
39
39
39
39
39
19
39
39
39
39
39
39
39
39
19
39
19
19
19
                                                     33
19
            NOTES:
                °erfnrm ones- yearly
                Continuous samoling recammenaed
                To be determined by the State of Virginia
                Un filtered
                In  the *ater column and  oed sediment
                                           51

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                        WILSON CR.  WINDMILL PT.
                            FIGURE 9.   Ware River

     The main channel  of the tidal Ware River is generally broad and shallow,
varying from about 25 ft deep near the- mouth to less than 10 ft in the upper
tidal reaches.  The channel margins and subtidal flats are generally narrow,
making up less than 20% of the water surface area.
                                      52

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Sampling Site Locations
     Recommended transect locations and number of sampling stations and depths
for the intensive sampling program are given in Table 11  and shown on Figure 10.
Six transects are located on the main stem of the Ware River and two transects
are located on Wilsons Creek.   There are a total of 12 sampling stations and
27 discrete sampling points.  The trend monitoring station locations should
consist of collecting one slack water sample in mid-channel and at mid-depth
at each of the eight transects.  Table 12 gives the total number of samples
to be collected for each intensive program and year of trend monitoring on
the Ware River.
                  TABLE 11.   Ware River Sampling Locations
  Location of Transect
Approximate               Number of
River Mile    Number of   Sampling
  (N.M.)      Stations     Depths
Total Number
of Sampling
   Points
Main Stem Ware River
Ware River Pt. to
Ware Neck Pt.
Windmill Pt.
Baileys
Cottage Pt.
Landing Pt.
Pig Pt.
Wilsons Creek
Roanes Whf .
	
TOTAL
•

0.0
1.8
3.7
4.5
5.4
6.1
3.1
0.0
0.0



3
3
1
1
1
1

1
J_
12


3,3,3
3,3,3
3
1
1
1

2
1 	
27


9
9
3
1
1
1

2
J_
27
                                     53

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FIGURE 10.  Recommended Sampling Locations - Ware River
                          54

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TABLE  12.
     Total  Number  of  Samples  Required  on  the  Ware River  Per
     Intensive  Program or  Per Year  of  Trend Monitoring
    Description of
Physical  Parameters
  Sathymetric Survey
  Tidal  Stage
  Current Velocity and Direction
  Freshwater and Point Source
  Discharge-
  Wave Height, Period, and
  Direction
  Salinity
  Water Temperature
  PH
  Suspended Sediment Load
  3ed Sediment Characteristics
Chemical Parameters
  Ul timate Carbonaceous 300
  3enthic Carbonaceous 300
  Total Organic Caroon
  Chemical Oxygen  Demand
  Alkalinity
  3ed Sediment Carbon Content
  Arnmoni a-N1trogen ^
  Nitrate-Nitrogen^
                  (4,5)
  Nitrite-Nitrogen'4'51
  Kjeldahl-Nitrogen'4'51
  Total Phosphate'3'
                      (cl
  Total Orthophosphatev
                          (4)
  Total Filtrable Phosohata;
  Filtrable Orthoonosphate'
  3ed Sediment Phospnate Content
  Dissolved Oxygen
 31oioq7cal Parameter?
  Phytopiankton Concentration-
  Zaoplankton Concentration-
  Seccht Oisic Oeptfr
  Nitrifying Sactaria
  £numeration(5)
Number ?sr
Intensive
Prsaram
(D
(2}
1350
(3)
200
575
575
575
575
12
575
575
575
575
675
12
1350
1350
13SO
1350
575
575
575
57S
12
575
24
24-
300
Number Per
year of Trend
.'"omtorina

—
27
—
8
27
27
27
27
12
27
27
27
27
27
12
27
27
27
27
27
27
27
27
12
27
12
12
12
 NOTES:
     Perform onca yearly
     Continuous samollnq  recommended
     To 5e aetarmined by  the Stats- of Virginia
     Fi1terea
     Unf i 1 tared
     in -he water column  and bea sediment
                              55

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                      CONCLUSIONS AND RECOMMENDATIONS

     The application and evaluation of mathematical  models developed to pre-
dict estuary water quality dynamics require detailed, valid data on both the
short- and long-term variations of many physical, chemical and biological
parameters.  Such data are currently not available and, therefore, comprehen-
sive water quality sampling programs should be implemented.
     A generalized sampling program designed to obtain the required data should
consist of two components:  a set of intensive programs designed to collect data
on water quality variations throughout complete tidal cycles and a trend moni-
toring program to track seasonal and annual variations.  This generalized pro-
gram should also provide sampling procedures which aid in the selection of
sampling locations and frequencies as well as ensuring the collection of
quality data.
     The generalized sampling program as applied to the Chester, Patuxent,
Poquoson and Ware Rivers should be considered as recommended sampling pro-
grams.  Even though the specific sampling programs developed for each sub-
estuary may exceed the states' water quality planning and management needs, such
data are required to adequately test and compare state-of-the-art models.
The States of Maryland and Virginia should refine the proposed, programs
based on 1) local knowledge of the factors which control water quality in
their respective subestuaries, 2) past, present or planned water quality
sampling efforts, 3) available sampling and analysis resources, and 4) their
priorities with respect to water quality management in each subestuary.
                                     57

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                                     REFERENCES

•  Baca, R. G., W. W. Waddel, C. R. Cole, A. Brandstatter, and 0. B. Cearlock,
    EXPLORE-I;  A River Basin Water Quality Model.  Battelle, Pacific Northwest
    Laboratories, Richland, WA to U.S. Environmental Protection Agency, August
    1973a.

    Baca, R. G., W. W. Waddel, C. R. Cole, A. Brandstetter, and D. B. Cearlock,
    Literature Review for EXPLORE-I:  A River Basin Water Quality Model.  Battel1e,
    Pacific Northwest Laboratories, Rich!and, WA to U.S. Environmental Protect!on
    Agency, August 19735.

    Chester River Study, Volume  II.  A Joint Investigation by the State of Maryland
A  Department of Natural Resources and Westinghouse Electric Corporation, November
9  1972.

    Hewitt, J. P. and J. V. Hunter, "A Comparison of the Methods Used to Calculate
    First Order BOD Equation Constants."  Water Research, 9_: 683-687, 1975.
»
£  Methods for Chemical Analysis and Waste.  A Technology Transfer Publica-
    tion, U.S. Environmental Protection Agency, Environmental Monitoring Support
    Laboratory, Cincinnati, OH,  1974.

    Patuxent River Program.  Maryland Department of Natural Resources, Water
    Resources Administration, Water Quality Services, January 1978.

    Standard Methods for the Examination of Water and Wastewater, Fourteenth
    Edition.  American Public Health Association - American Water Works Associa-
    tion - Water Pollution Control Federation, 1975.

    Tidal Current Tables 1978, Atlantic Coast of North America.  U.S. Depart-
•  ment of Commerce, National Oceanic and Atmospheric Administration, National
    Ocean Survey, 1977.

    Tide Tables 1978, High and Low Water Predictions, East Coast of North and
    South America, Including Greenland.  U.S. Department of Commerce, National
    Oceanic and Atmospheric Administration, National Ocean Survey, 1977.
•
    Tuffey, T. J., J. V. Hunter  and V. A. Matulewich, "Zones of Nitrification.11
    Water Resources Bulletin, JOJ3):555-563, 1974.

    Wild, H. W., C. N. Sawyer and T. C. McMahon, "Factors Affecting Nitrifica-
    tion Kinetics."  Journal of  the Water" Pollution Control Federation,
•  43:1845,  1971.

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                                APPENDIX
                     WATER QUALITY AND HYDRODYNAMIC

                         SUBMODELS OF EXPLORED
[]} This Appendix  is  composed  of  Sections  IV  and  V of  the  EXPLORE model
   documentation  report  [Baca at al.,  1973a]

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                         SECTION -V

                      Sa QUALITY SUBMODELS

The water quality submodels used to describe the  reactions  of
various quality parameters in bc-ch the river and  estuary  and
dee? reservoir models are discussed in this section.  A review
of all quality models identified during an extensive  literature
survey is contained in Appendix A.

la choosing the models for each quality parameter, a  number of
guidelines were considered.  Past successful use  of a model was
an important criterion, because the purpose of this study was
to identify and use the bes-c existing models rather than  to
develop new ones.  Ln addition, the simplest models which would
provide acceptably accurate results were selected.  Consider-
ation was also given to the model's ease of calibration with
existing water quality data.

The program consists of eleven integrated water quality sub-
models which predict the behavior of sixraen water quality
parameters.  A diagram of the relationship between these  sub-
models is shown in Figure 4 and Table 1 provides  a list of  the
sixteen water quality parameters .

BIOCHEMICAL OXYGEN DEMAND

A number of models reviewed treat the biochemical oxygen  demand
(BCD)  reaction in a river system as other than a  first order
reaction.  These models have two things in common:  first,
chey do not predict 30D concentrations with any more  accuracy
than the first order models.  Second, considerably more data
are required, to determine the large number of coefficients  in
these models .   Hence , a model using first order 2GD raacricns
was
The carbonaceous and nitrogenous ccmpcr.en.ts of  3CD  were sepa-
rated to allow individual, treatment of each, reaction.   'The,
3CD equations ara written as
                                                        (2)


           Cf        I/Tr—"7 f 1
     <  = v  rip1* a  (. j- ^^ ^                                / ±\
     *••,   '^T I «•« I' •- _             '                        V ** ^
       I     L      CT
                              A-l

-------

-------
                                    0
                                    s
                                    H-
                                    <
                                    OS
                                    '-3
A-2

-------

-------
    TA3L2 1.   WATZE QUALITY ?A?JU
-------

-------
                                                            (5)

     , n   • r..,n, .(T-20)
     >
-------
     1 dLd        Ld          c
     H at" = " k4 H?c  *  k3  Lc                        (


     :<4 =* :<4(20)  s^2a)                                 (3)


where

     L, = araal benthic 30D,  mc/a


     !<4 * deoxygenation coefficient for benthic 3CD


 k4(2Q) =» deoxygenation coefficient at 2QaC: 0.0-0.3/day


     3^ * teaiperature  coefficient:  l.QS


      S = average river death/  m

     ?,!<-, L  are defined  above
      c   j   c

This equation is coupled to  the carbonaceous 3CD equation
through the constants  ? /  k? anc* ^c-

^OTAL QRGA^IIC C\P^CN

}To iBodels were identified  for siaulating- the reactions of
cotal organic carbon  (TOO during the literature review.  The
following- first order  niodel  was developed (sae iccendi^c A)
and is used. \n the c.
     dt
where

     Cm = cotal organic  carhcn,
     C_ = refractory organic  carbon,  nic/1
                             A-5

-------

-------
     M-, = deoxygenation coefficient: 0.1-0.8/day


 M, (20) = deoxygenation coefficient at 20°C


     M., = sedimentation coefficient: Q.O-3.5/day


     A^ - proportionality cons-ant: 10.0


     L^ = carbonaceous 30D, mg/1


     ?3 = scour of degradabie organic carbon: 0.0-0.3 mg/l-day


     ?P = scour of refractory organic carbon: 0.0-0.3 mg/l-day


     9_ = temperature coefficient: 1.05
This rodel is rela-ced -o the 30D model since -she rate of reaction
depends upon the concentration of carbonaceous 300.

NIT30G5N MODSL
Two nitrogen models have been included in zhe program.  One con-
siders the effects of algae while che second includes ammonia-nitrate
dynamics.  The algal nicrogen model  (Figure 3a) assumes that  each  reac-
tion can be described, by a first order equation.  The concentrations
                                           FIGURE 5.   NITROGEN

                                           MODELS
                              A-S

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-------
   of the various nitrogen  f orris  ara given by C^ and the ratas of
   reaction are given by ji_.   The various nitrogen components wera
   formulated as a  first order n:cdel for two reasons.  First, the
   relative simplicity  of the  first order equations with only one
   constant to be evaluated (along with the boundary conditions)
   is attractive.   Detailed data  for regression on a large nuaber
   of cons-tants will generally not be available.  Second, the'
   fi.rt order model has been shown to work satisfactorily, at
   leasr under certain  conditions.  The codel is described by the
   ecuaticns:
     dC
                    J3C4  -
ffl
dt

dC3
dt"

dC.
      2C2
                        'IT?
                  *
                                                           (12)
                                                           (13)
                                                           (14)
                                                     (15)
where
     C.J =» asctcnia  concentra-tion,  ag/7!


     C7 * nitrite  concentration,  rag/1


     C- =* nitrate,  concentration,  ac/1


     C  = organic  nitrogen  concenrrarion ,  -Tig/1
^ ,  ^ ,  3
                rats  ccns-canrs :  0 . 1-0 . 5 ,  5 . 0— 1Q . a , a . 1-0 . 4/day


        * chyiroplanlc-cn  and soaplankton: ccncen-rations , aig-C/1

        ^A.^-. = raric  of  nitrogen to carbon in ohytopianxton
               and in zocplanJcton :  0.17,  0.15 ag— N/ag-C

       /G^ — growth rates  of phy-opiarJcton and scop lanktcn, /day


       /D  = death rates of phytoplanktcn and =ocplan:ctcn,/cay


               D-, and D_  ara f emulated, in, the algae -ccai.
                s        a.
                               A-7

-------

-------
A simple first  ordsr ammonia-nitrate mods!  (Figure  3b)  has been
included in  the coda for use when algal affects are not. to be
considered:
  •*• _ _  T r
~ '   U2C1

dC,
    at
                                                           (15)
                                                           (17)
PHOSPHORUS MODEL.

Three phosphorus models  are included in the quality model  pro-
gram.  One includes  the  first.order reactions of soluble
phosphorus with algae  and with  the sediments.  The second  is  a
first order reaction model between solvable and sediment phos-
phorus .  The zhird model is a second order decay model for
soluble phosphorus.

•The algal phosphorus model selected (Figure 6a)  is similar to
the nitrogen model and assumes  that the reactions between  the
various forms of phosphorus can be described by a first order
equation.  The concentrations of the phosphorus forms are
given by D^ and the  rate constants for the reactions are
given by I~.


so
3HC
1


5?HORU5. ;
37 . '
i"^
ScOIMS.'lT
'HOSPHORUS
31
A f
*» L »
! -
\
I
AL2AL ! 	 fc
= HQS?.HORUS ^


aecAYiNS
t 1 or i,« r r
?HOSPHQRUS
31



I
'.Sr^ACTQSr-s
1

j
3QLu3L£
'HCSPHORUS
3?
"

r 3HCSPHQRUS
^ '' Q-
4( 	 1
3. FiSST OROES PHOSPHORUS -OOSL
SOLUBLE
SHOSPHOSUS
°2
i
1
1 ''Z >

  A. Ai.SAL PHOSPHORUS
                                    C. ScCSNQ JSCi?. 'HCSPHORUS
                   FIGURE 5.  PHOSPHORUS MODELS
                              A-3

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-------
 Phosphorus was modeled as a set of first ordar reactions pri-
 marily because no other models were available in the lireratu:
 The first order modal allows a sins is analysis method  for
 phosphorus behavior in cases where sufficient da-a are  avail-
 able" co calibra-s the model.  In addition, scne past work
 has indicated tha-c first order reactions are applicable to
 phosphorus behavior in at least some areas .

 This model is considerably ' simpler than most proposed  phos-
 phorus cycles because it would not be possibla to determine
 all the rate constants involved in a complicated system,
 Phosphorus data are usually incomplete and it is vary  un-
 likely that enough data would exist to allow a regression
 analysis on. many constants.   The equations for this modal are:
     dD.,
                                ' V -Sp               (IS)
         ^ -I2D2 - 1,0,                                 (13)


     dD,

     — - - r3D3 + V ^P "  (D2  ~ GZ)AD22            (2C)

whara

     D^ » soluble phosphorus concentration, mc/1


     D-, - sedimentary phosphorus concsn-cr-aricn ,  -g/1

I, , I^ , Z7 =- rate, constants : 0 . 1-0 . T/day

      3 * phytoplankton. concan-tratian ,  ag-C/1

      Z * zooolankton concsnrration , mg-C/1

        ~ ratio or nitrogsr. to caxbcn in phytoplanJc— on and
          rcop lank ton:  0.17, a. IS  mg— Vmg-C*

        ~ growth, rates  of phy top lank ton and zcoplankton,/day


        * dear:": --tas of phytopianJ-cton  and zee? lank-can, /day

          D, and D  ars formulanad in  the algae modal.
                               A-9

-------

-------
The firs- order modal  (Tig-ore  So)  assumes that only reactions
between soluble and sedimentary  phosphorus occur.  This model
uses the equations :
     2~ = - I1D1 +  I2D2                                (21)


     cD
     -nr- - - r2D2 -  ITD,                                (22)
     v«fc W        £  £•     +*. J»

where- the notation is  the  sane as above .

The second crder model (Figure 5c)  uses the equation:

     dD          ,
     rr^- = - IT°L                                       (23)

PHOTOSYNTHESIS AND 3Z3PI3ATION OF aUSrSSDSD ALGAZ

The model chosen to  represent the rate of photosynthesis and
respiration of suspended algae is a two term harnonic function
of the form:

     (?-R) c = A, cos (cut •-!•  i)  -r A7 cos(2ut -re:)          (24)

where

     (?— R)   = net rate of  thatosvnthesis  and respiration:
          3   =(3.1-2.0) ,  mg/l-day

         j. = period,  days

 A. , A-, , p , ct = constants

 This  formulation was  selected  for two  reasons.   First,  it  is
 relatively simple since only  three constants need, to be  deter-
 .TiinecL (A^,A2 and. the difference  o-c:} .  The: success of previous
 authors In using- one, two, and. three terar periodic functions
 to model diurnaL variations has-  shown  that these relatively
 simple expressions can. be successfully applied..   Second, the
 two term expression is more desirable  than the  one term  expres-
 sion  since with two terms the  maximum  rate of photosynthesis
 need  not  equal the maximum rate  of respiration.

 An option is provided in the  program which allows the user to
 couple this equation  to the phytoplanJctcn density.   This is
 done  simply by:

      (?-R)s - 5?                                          (25)


                              A-10

-------

-------
Where ? is the phytojlaafctcn  concentration and 5 is a
proportionality  constant.

PHOTOSYNTHESIS AND 3ZS2I3ATION OF ATTACHED ALGAZ AND
3ENTHIC  PLANTS

The  modal chosen to represent the net rate of photosynthesis  and
respiration  of attached algae and benthic plants is identical to
that used for the suspended algae model,  it is given as

      (S-R) ,  = A  a cos(ui t + 
-------

-------
wrier a

     T = temperature,  3C

Four separate models  for  estimating the raaeraticn coefficient
have been included  in  the program.   These models cover most
of the work dona on re aeration  coef f icients .

The first model for the reaeration  coefficient is a general
velocity-depth medal  of the  fora
     k2 = rL —                                       (29)


where

     '<-) - reaeration  coefficient , /day


      v = velocity, ft/ sec

      h = depth,  ft.

      r^r.,,-., =  constants-.  2.0-12.0,  0.5-1.0,  0.35-1.35
                                             *

The second model  is one  proposed by O'Connor and Dobbins^
which is given as

               D  1/2-1/4
     k  = 11Q9- JS — —- -  for C <17                    (30)
                    v "
           (D
                    for C  >17                              (31
where  C - 	' .  /a
           (hS)^2-

and

     ILj =• liquid film diffusion  coefficient:  0.01-0.02  ft  /sec


      5 =* river" channel  slone

The third model,  proposed by Dobbins,   is  given as:
                               -12

-------

-------
                    3/8
           2772 C,AEJ/8 coth
                                                           (32)
where
      A - 9.S8 +> 0.054  (T-20)

      3 = 0.97S +• 0.0137  (30-TJ3/2

      E - 30. v S

      5 =» gravita-fcional cons-tan-t,  f-t/ssc

      T = tamseratura ,  "G

    faiirtii model was oraoosed bv Thacxs-ton and Xrsakel •
0.000299   1 +>
                  v \  1/2
                          ^^zb.
                          , '   A
                                         Scr
                                                           (33)
The temperature dependence of  the  reaeraticn coefficient for
models one, two and. four above is  described by the following
relationship:




This relationship was  chosen because it is based on large
amounts of data, and has proven, reliable in. many investigations,

The effects of  wind on the  reaeration coefficient have been
observed;  however, only minor  theoretical, treatments were
found.  Therefore, wind effects were not included in this
model.

 'vith  the  exception of TOC (che contribution of which  is  handle
 through the 3CD models) and toxic compounds/  all  models  dis-
 cussed previously provide inau-r information either  directly
 or indirectly to  the  dissolved oxygen model.  'The general
 equation  describing the dissolved oxygen  level is

                             A-13

-------

-------
                            »*



 where

              DC = dissolved oxygen, rag/1

        k^,k^,k,, = deoxyger.ation races for carbonaceous,
         "~         nitrogeneous and benthic BOD, /day

              k7 = reaeration coefficient, /day

      (D0_ - DO) = dissolved oxygen deficit

   (?-R) _, (?-R)   = photosynthesis and respiration rate  for
        3      a   suspended and attached algae, respectively

 Values for the rate constants and femulation of  (?-R) con-
 -ribucions are presen-ed in previous sections of -he report.


 ?LAN:
-------

-------
Notation



      ? = phytoplankton concentration,  r.g-C/1



     G0 = phytoplankton growth  ra~a, /day




     D., =» chvtoolanktcn daatui rata,  /dav
      p   - -  -



      Z * zcoplankton concantration, ag-C/1



     GZ =» 2ooplank-ton growth rata, /day




    . D  = zcoplankton dsath rata, /dav
      te                              "*



    .M » nitrara-nitrogen ccncantraticn,  ag/1



    ?1  = saturatad growth rata  of phytoplankton:0.05-0.20 /day-aC




     T = taiaaarattira, 3C



     f = photoparicd:0.3-0.7, days



    ]
-------

-------
 A  ,A,  = ohytooiankton nitroaen-carbon ratio: C.05-0.17
  M ^^   jj   *    ^
      "*•   ing-N/mg-C and phosphorus-carbon ratio: 0.024-
           0.24 mg-D/ir.g-C

 A ../-Aj  = zooplankton nitrogen-carbon ratio:  0.05-0.17
  n"i'       mg—M/mg-C and phosphorus-carbon ratio: 0.024-
           0.24 mg-D/mg-C*

     A   = zoopiankton conversion efficiencv:  0.5, mg-C/ma-C
      zp
     K   = phytopiankton Hichaelis constant: 0.06, mg-Chl/1

      ?. = zooplankton endocencus respiration  rata Q.01
           /day-°C

      ?d = zooplankton death rata due to other causes, /day

       D = phosphorus concentration, mg/1

       C = carbon

     Chi = chiorophyll-A

This modal considers two trophic levels  (phytoplank-on and  zoo-
piankton) and two limiting nutrients  (nitrogen and phosphorus).
If carbon is limiting, then additional Michaeiis-Menton  terms  cai
be added to Equation 33 to adjust the saturated .growth rate.

This model was selected because it is the least complex one
available which accounts for ail of the pertinent ecological
parameters associated with phytopiankton and zooplankton.   In
addition, the model has been testad successfully in field
studies.  Average values for a number of the constants have
been determined.  The remaining" constants have to be evaluated
through calibration with field data.


TOXIC COMPOCKDg

The literature- survey revealed very little information on the
modeling- of toxic compounds..  The behavior of  toxic compounds
in an aquatic environment is highly variable and depends upon
the compound being modeled.  A model which would predict the
interaction of tcxic compounds with sediments, biota and other
constituents would be a fine scientific tool but impossible to
develop within the scope of this program.  "igure 7 illustrates
the. complexity of the problem and traces the distribution and
       of toxic materials.
                              A-16

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-------
Therefore, a simple  r.~"  crdar decay modal was  included zo de-
scribe toxic compounds.   This model accounts fcr  any  order of
dacay desired,  including zaro order, and can easily acccirmoda~e
nonlinear behavior.   The modal is giver, as:
      c
         ,-1
         "c
                                                            (42)
wnera
     T  * concan -ration of toxic ccnnound
c
a
          rata  constant
      n =* order  of decay

This decay model can be used to represent any  of the mechanisms
of exchange  such as cheaical transformations,  sedimentation,
biological uptake,  and sorpticn.
                           3T
                       HIGHEH
                    AOUATTC ?«.A«TS
                                            CHEMICAL ArtO   |
                                          (PHYSICAL ?*CCi32c3i
   FIGURE  7.
        FACTORS  AFFECTING THE OISTRI5UTIQN  AND FATE OF
        TOXIC  MATERIALS IN WATER
                               A-17

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                          SECTION V

                   HYDRAULIC MODEL SELECTION

Thrae capabilities were required of the hydraulic model  to
be practicable for routine use:  1) it must be. applicable
to large scale physical systems  (such as entire river basins);
2) it should accommodate as many of the flow regimes as  pos-
sible which would be present in a river basin  (e.g., small
streams, large rivers, and tidaily influenced  regions);
and 3) it must: utilize an efficient and reliable algorithm.


HZDa&GLIC .MODELS CCNSPSS5D

Among the available hydraulic models considered for inclusion
in the EXPLORE-I cede were the following:

          Author                        Description

     1.  Amein and Fang              Implicit  Flood Routing

     2.  Amorocho and Strelkcff      Hydraulic Transients

     3.  Garrison                    Unsteady  Flow Simulation

     4.  Pisano                      River 3asin Simulation

     5.  Watsr Resources Engineers   Storm Water Management

A summary of the hydraulic models reviewed is  presented  in
Appendix A.  Few general purpose computer models capable of
handling complex river networks and varying hydraulic regimes
ars available for simulation of open channel flow hydraulics.
In fact, general, practice has relied upon simple regression
relationships for s-cage and velocity as functions of flew.
More scphisticatsd techniques ars required, however, for
estuardne hydrodynamics-

The Water- Rascurcss Engineers (WH2) Dynamic Estuary Model is
to data the only hydrcdynamic medal, capable of handling  various
hydraulic regimes and complex system gecmerrias.  At least
three versions of chs original program are,,currently available,
including the- FWrCA. Dynamic Estuary Model,'    the Columbia
River Mcdel,3   and the Storm Water Management Model.0    Each
version varies in overall generality and in the numerical
aTTcrcximaticns used.
                              A-19

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MODEL SELECTION

The hydraulic simulation module of the  EXPLORE-1  computer model
is an adaptation and extension of the receiving water component
of the Storm Water Management Model.  This rr.cdel  utilizes a
pseudo two-dimensional approach to solve momentum and continuity
equations on an arbitrary computational mesh  consisting of a set
of interconnected channels and junctions.

The equations of motion and con-inuity  for open channel flow
(Saint-Venant equations) consist of two simultaneous  equations:

     Momentum


   •  S - v4? + gl| = g (S -S.-QJ                         (43)
     
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     D7 =-0, for buUc lateral outflow

     Dj - TT* — , for seepage outflow
          V-uz
     D,, s  ^   c, ror iararal inflow
      i.    aq

where

     u, =* x-conrponent of the inflow— velocity  vector.


The Saint- Venant aquations can also be written  with discharge
instead of velocity as the griaiary kinetic  variable.   For flow
through a rectangular cross section with negligible botton
slope and dynastic affect (of Lateral inflow)  these  aquations
reduce to

     Moaentua
     Continuity

     44^4|=a           •                             (46)
     oC   sX

where

     *7 =* verticallv averaged channel  velocity

     h = water" daprih

     Q = vclusetric flow rata

     A =• channel cross-sec-ional area (A*ch)

     h - channel width

     h - channel depth

    3  = wind stress tarn
     w

The wind stress tarn Sw has been added to  the traditional fo
Bula-cicn co account for wind af facts.   In  certain cases wind
induced currants can be significant to  -he analysis af -he
flow ractams .

Mcst versions of the W2Z hydraulic, mcdei are  f emulated in
tarns of head (potential) instead of  wacar depth, which has
                             A-2I

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created some confusion about the correctness and completeness of
the momentum and continuity equations.  In previous versions of
the hydraulic model, the following substitutions were generally
made:

     3h _ SE                                               (47)
     Tt ~" ot

     3H =» _ 1J1 j. s                                         ^4S)
     Tx     3x '   o

     SQ = - ||                                             (49)

Convenience and convention, rather than computational reasons,
dictate the use of these approximations.  The bottom slope con-
tribution S  is generally small in estuarine applications.
However, in°river systems where changes in elevation drive the
motion of water,  these contributions can be significant.

The iXPLQRS-I hydraulic simulation program uses the modified
form of the Saint-Venant equations to model the two-dimensional
flow in an estuary or one-dimensional flow in a river system.
A system is geometrically represented by a computational grid
network,  using a simple routing concept, the flow in the system.
is prescribed along paths designated by channels con-
nected by junctions.  Eacn junction is cnaracterized by its
1) surface area,  2) water surface elevation, 3) bottom elevation,
and 4)  the actual  (X,£) coordinates.  Surface areas are computed
from those polygons formed by the perpendicular bisectors of
channels in the network.  Flow between these junctions occurs
through rectangular channels which connect the junctions.  The
characteristics of each channel are described by length, width,
Manning coefficient, and average bottom elevation at the mid-
point.  Figure S illustrates the channel-junction configuration.

In the numerical, solution scheme, the Saint-Venant equations are
not solved, simultaneously for all points in the water system.
Instead, che equation, of motion, Equation 50, is solved for each.
of the channels in the system on. the basis of present values of
the junction heads.

     Momentum




where

     *7 =• velocity

     H: =• water surface elevation measured from the
         datum, plane

                             A-22

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              JUNCTION
     FIGURE  3    CHANNEL-JUNCTION DEFINITION FOR
                 COMPUTATIONAL MESH3Q
        = wind stress
_
u  COS 'i
      K » dixensionlass coefficiant with a value cf
          0.0026  (3afs. 2  £  3)

      d * depuh. of flow

  Pa/p  » air and watar densities
   War  W
      CT = wind velocity

      ;£ =' ancle bettveen the  wind direc"tifln and the axis
          of the channel

The velocity and flow in each  of  uhe channels is thus decemined.
The equation cf continuity,  Equation. 51, is solved at each of
the junctions on the basis cf  predicted flows in. each, cf the
channels.
                               A-23

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     Continuitv
          :ai _  v-  «   , oim   «ex
where

     A •  = surface area associated with  the junction j

      Q?.  = flow of a connecting  channel

      im ^.ex  °v
     Q^ /Q- rQ^  * water import,  export  and evaporation
      -»   -   -    rates at the  junction

       lc = number of channels  connected  to the j ""a junction

The numerical integration technique  employed in the hydraulic
model uses a space- and time-staggered scheme based on  a sim-
ple Hunge-Kutta approximation.   The  finite-difference equation
for the momentum equation may  be expressed for the i~
channel as:

     IV..        AV.


                                                          *
where

     V. - channel velocity

     It = time step


    -~=- ~ velocity gradient


     X. s» frictional resistance  coefficient for channel i

      g = acceleration of gravity

     ^i "" Wi-taj""i   -engt.*

      h * averace channel denth
The velocity gradien-  tern  is  computed front the continuity
ecuation:
                              A-24-

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         AV.
       7,-j—s. = V.
        -Ax.    i
b.  Ah,.   V.  AA. 1
with

     b. = channel width

     A; = channel cross-sectional  area

In addition, the relationships given below

     Ah.   AHi     Aft               £S



and

     AA. * b.Ah.                                           (55)

are used in intermediate computations of  the key variablas:
V, h, Q, H, A.  Since heads  (potentials)  are designated and com-
puted at junctions the terms  AH.;/At and AA-j/L^ are computed as
the average of changes at the junctions   at bcth ends of the
channel.

The numerical solution technique proceeds as follows:.

     Initialization

     1.  Set initial and boundary  flows and stages.

     2.  Set import and/or export  of flows.

     3.  Set water- surface elevations and/or tidal conditions.

     Leap Frog- Z:cslicit Solution
     1.  Ccapu-ts half-interval  velocities,  '~. ' "'   and quarter-
                             w    ?^-/*      **
                « 77
                          r- * gs V

                           *»
                          A 7
     2.  Controlled function calculations  for flow at1_cua^-ter
         intervai, QT~ ~ , and head  at  half -interval ,  HJr ' "/ " -
         Head and/cr^flow oay be specified functions of time
         or related via a rating- cu.rvs.
                             A -25

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3.
     4.
                                         c-1 /2
         Coispute head at half- interval, H^  "'
    n .
                     .    _
                = a .  T -
                       2A
                         sj
                             .<
                             r
                       i=L
- o
   3

-1/2
   ev
" QJ
    Compute half-interval flows, Q,- '    ,  and  channel.
    areas, Ar~^'~ and full-interval velocities,  V^-:
                = A" + b.

          ,t+L
                                                   .t-f-1/2
                                               -  g.
                                           1
         Controlled junction calculations  for  flows  and  heads
         at full tise steo.
         Ccnpute full-interval heads, 3^'*/ water  depths,
         "nP"*"^- and channel areas, Ar^: ^
         •
                                  Qt+l/2
     7.  Update system parasierars  and  repeat steps 1 through
         o until, hydraulic cycle is complete»

     3.  Average flows and velocities  over  hydraulic cycle.

This leap-frog schente introduces a certain  degree of accuracy
and stability to The explicit numerical  solution;  however",
there are inheren- conputa-ional lirtizawicns.   To maintain
a stable and accurate solution  the following criterion must
be aocroxiria^eiv satisfied:
                                A-26

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                                * \
crR
                                                            (37)
where
           = raaxiriusi  tine  star? far stable solution.
The expression In  the  brackets represents the celerity of  a  shallow
water water wave.
                              A-27

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