United States
Environmental Protection
Agency
Office of Research and Development/
Office of Water
Washington, DC 20460
National Coastal
Condition Report
&EPA

EPA-620/R-01/005
September 2001
www.epa.gov/owow/oceans/NCCR/index
                     USDA
           Impaired Human
            nd Aquatic
            Life Use
            23%


             Impaired
             Aquatic
             Life Use
        Poor
                             I Overall National
                             I Coastal Condition
                               A
                  fel

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Sanctuary's dedication ceremony, the entire community was invited to participate
in a Native Hawaiian fish gathering activity known as a"hukilau."The Maui Sanctuar;
office sits in front of one of the last remaining Native Hawaiian fishponds in South
Maui. Prior to the Sanctuary's official approval, many people from the fishing
community feared the imposition of additional Sanctuary regulations. On the
contrary, however, fishing is not regulated in the Sanctuary but rather encouraged
and welcomed throughout its waters (Photo:Jeff Alexander).
                sonal catch of herring in Tomales Bay (Photo

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Acknowledgments
                    COaStal repOrt was prepared by the U.S.
           Environmental Protection Agency (EPA), Office of Water and
           Office of Research and Development (ORD). The EPA Project
           Manager for this document was Barry Burgan, who provided
           overall project coordination as well as technical direction. The
           principal author for this document was Kevin Summers, Technical
           Director of ORD's National Coastal Assessment Program. EPA was
           supported in the development of this document by RTI and
           Johnson Controls World Services. The content of this report was
           contributed by the U.S. Environmental Protection  Agency, the
           National Oceanic and Atmospheric Administration (NOAA), and
           the Department of Interior in cooperation with several other local,
           state, and federal agencies. Special appreciation is extended to the
           following team, who provided technical information, reviews, and
           recommendations throughout the preparation of this document.
                Barry Burgan, EPA Office of Water
                Darrell Brown, EPA Office of Water
                Edward Stets, EPA Office of Water
                Dan Farrow, NOAA National Coastal Assessment Branch
                Andrew Robertson, NOAA National Ocean Service
                Jeff Hyland, NOAA National Ocean Service
                Mark Jacobsen, NOAA, Special Projects Office
                Rick Hooper, U.S. Geological Survey
                Steve Robb, U.S. Geological Survey
                Jennifer A. Greiner, U.S. Fish and Wildlife Service
                  Coastal Program
                Thomas E. Dahl, U.S. Fish and Wildlife Service Branch
                  of Habitat Assessment
                                                     National Coastal Condition Report

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National Coastal  Condition  Report

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                 Contents
Executive Summary  	xiii
         Summary of the Findings	xv
    Describing Coastal Condition	xvii
         Coastal Monitoring Data	xx
         Assessment and Advisory Data	xxi
         Shortcomings of Available Data	xxiii

Chapter 1—Introduction	l
    Why Are Coastal Waters Important?	2
         Our Nation's Coasts Are Valuable and Productive Natural Ecosystems .. 2
         More Than Half of the U.S. Population Lives on the Coast	3
         Why Be Concerned about Coastal Condition? 	4
    Indicators of Coastal Condition	5
         Shortcomings of Available Data	6
         Coastal Monitoring Data	6
             How the Indicators Are Calculated	7
             Water Clarity	8
             Dissolved Oxygen	9
             Coastal Wetland Loss	9
             Eutrophic Condition 	10
             Sediment Contaminants	11
             Benthic Condition	11
             Fish Tissue Contaminants 	12
         Assessment and Advisory Data 	13
             Clean Water Act Section 305(b) and 303(d) Assessments	13
             State Fish Consumption Advisories	14
             Classified Shellfish-Growing Waters 	14
             Beach Closures	15
         Purpose of This Report	16
         Federal Programs and Initiatives That Address Coastal Issues	17
             CWAP: Coastal Research and Monitoring Strategy	17
             National Coastal Assessment—Coastal 2000	17
             Environmental Monitoring and Assessment Program	18
             Coastal Zone Management Program	19
             National Marine Sanctuary System	20
             National Estuary Program	21
             NOAAs National Estuarine Research Reserve System	22
             NOAAs National Status and Trends (NS&T) Program  	23
                                                        National Coastal Condition Report

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                      NOAA's National Marine Fisheries Service National
                         Habitat Program	24
                      EPA's Great Waters Program 	25
                      USGS National Streamgaging Program	26
                      U.S. Fish and Wildlife Service Coastal Program 	27
                      U.S. Fish and Wildlife Service National Wetlands Inventory 	28
                      EPA's BEACH Watch Program	28

         Chapter 2—National Coastal Condition	29
             Coastal Monitoring Data	32
                 Water Clarity	32
                 Dissolved Oxygen	32
                 Coastal Wetland Loss	33
                 Eutrophic Condition  	36
                 Sediment Contaminants	37
                 Benthic Condition 	44
                 Fish Tissue Contaminants  	48
             Assessments and Advisories	49
                 Clean Water Act Section 305(b) and 303(d) Assessments	49
                 State Fish Consumption Advisories	54
                 Classified Shellfish-Growing Waters 	56
                 Beach Closures	56
         Highlights
             Atmospheric Deposition of Nitrogen	34
             Water Quality in the National Estuarine Research Reserves	35
             Index of Watershed Indicators	40
             Unified Watershed Assessments	41
             Coastal Habitat Losses and Gains—Developing a National Strategy	42
             Exotic Species in Coastal Environments 	46
             Coral Reefs in the United States	52
             Freshwater Inflow to Estuaries—How Much  Is Enough?	58
             Developing a Nationwide Strategy for Marine Protected Areas	60

         Chapter 3—Northeast Coastal Condition	63
             Coastal Monitoring Data	66
                 Water Clarity	66
                 Dissolved Oxygen	66
                 Coastal Wetland Loss	67
                 Eutrophic Condition  	67
National Coastal Condition Report

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         Sediment Contaminants	70
         Benthic Condition 	71
         Fish Tissue Contaminants  	73
    Assessments and Advisories	76
         Clean Water Act Section 305(b) and 303(d) Assessments	76
         State Fish Consumption Advisories	80
         Classified Shellfish-Growing Waters 	81
         Beach Closures	82
    Summary 	83
Highlights
    Water Quality of the Near Coastal Mid-Atlantic Waters	68
    Massachusetts Bay	69
    Casco Bay Estuary Project 	74
    Delaware River Basin Commission 	75
    Coastal Habitat Study of the Gulf of Maine  	78
    Comprehensive Study of Habitat Complexes of the New York
         Bight Watershed	79
    The Chesapeake Bay Program	84
    Long Island Sound Dissolved Oxygen	86

Chapter 4—Southeast Coastal Condition	87
    Coastal Monitoring Data	90
         Water Clarity	90
         Dissolved Oxygen	91
         Coastal Wetland Loss	91
         Eutrophic Condition 	92
         Sediment Contaminants  	93
         Benthic Condition 	94
         Fish Tissue Contaminants  	95
    Assessments and Advisories	97
         Clean Water Act Section 305(b) and 303(d) Assessments	97
         State Fish Consumption Advisories	98
         Classified Shellfish-Growing Waters 	99
         Beach Closures	99
    Summary	102
Highlights
    Eutrophication Studies in the Neuse River Estuary	100
    South Carolina Estuarine and Coastal Assessment Program  	101
                                                         National Coastal Condition Report

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         Chapter 5—Gulf of Mexico Coastal Condition	103
             Coastal Monitoring Data	106
                 Water Clarity	106
                 Dissolved Oxygen	106
                 Coastal Wetland Loss	108
                 Eutrophic Condition  	109
                 Sediment Contaminants	112
                 Benthic Condition 	113
                 Fish Tissue Contaminants  	114
             Assessments and Advisories	118
                 Clean Water Act Section 305(b) and 303(d) Assessments	118
                 State Fish Consumption Advisories	120
                 Classified Shellfish-Growing Waters 	121
                 Beach Closures	124
             Summary	125
         Highlights
             A National Strategy To Address Hypoxia in the Gulf of Mexico	110
             Lake Pontchartrain, Louisiana's Troubled Urban Estuary	116
             Seagrass Meadows in Laguna Madre	117
             Mercury Contamination of Fishery Resources  	122
             Lavaca Bay, TX—A Case Study	123
             Habitat Improvements in  the Gulf Coast—The Tampa Bay
                 Estuary Program	126
             Alabama Environmental Monitoring and Assessment Program	127

         Chapter 6—West Coastal Condition	129
             Coastal Monitoring Data	131
               Overall West	132
                 Coastal Wetland Loss	132
                 Eutrophic Condition	132
               Small Estuaries of the West Coast	132
                 Water Clarity	133
                 Dissolved Oxygen	133
                 Sediment Contaminants	133
                 Benthic Condition 	133
               Southern California Bight (Offshore)	134
                 Water Clarity	134
                 Dissolved Oxygen	134
                 Sediment Contaminants.                                      .135
National Coastal Condition Report

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         Benthic Condition 	136
         Fish Tissue Contaminants  	136
       San Francisco Bay	137
         Water Clarity	137
         Dissolved Oxygen	137
         Sediment Contaminants	140
         Benthic Condition 	142
         Fish Tissue Contaminants  	142
       Puget Sound (Northern Sound Only)	143
         Water Clarity	144
         Dissolved Oxygen	144
         Sediment Contaminants	144
         Benthic Condition 	145
         Fish Tissue Contaminants  	145
    Assessments and Advisories	145
         Clean Water Act Section 305(b) and 303(d) Assessments	145
         State Fish Consumption Advisories	148
         Classified Shellfish-Growing Waters	149
         Beach Closures	150
    Summary	151
Highlights
    Puget Sound Ambient Monitoring Program (PSAMP)	138
    Lower Columbia River	139
    San Francisco Bay Estuary Project	152
    Northwest Indian Fisheries Commission	153

Chapter 7—Great Lakes Coastal Condition	155
    Coastal Monitoring Data	158
         Water Clarity	158
         Dissolved Oxygen	158
         Coastal Wetland Loss	158
         Eutrophic Condition 	158
         Sediment Contaminants	162
         Benthic Condition 	163
         Fish Tissue Contaminants  	164
    Assessments and Advisories	165
         Clean Water Act Section 305(b) and 303(d) Assessments	165
         State Fish Consumption Advisories	166
         Beach Closures	167
    Summary	168


                                                         National Coastal Condition Report

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        Highlights
             Great Lakes Indian Fish and Wildlife Commission Issues Fish
                 Consumption Information for Tribal Members	160
             The International Joint Commission	161
             The Great Lakes National Program Office	169

        Chapter 8—Coastal Condition for Alaska, Hawaii,
        and Island Territories	171
             Alaska	173
             Hawaii	176
             Puerto  Rico	177
             Other Island Systems  	179
             Summary	180
        Highlights
             Cook Inlet Information Management & Monitoring System	174
             Cook Inlet, Alaska	175
             Kaneohe Bay, Hawaii—A Coastal Intensive Research Site	181
             Marine Alien Species Workshop in Hawaii	182

        Chapter 9—The Future - A National Strategy	183
             Objectives of Research and Monitoring within an Integrated
                 Assessment Framework 	188
             Monitoring	190
                 Characterization  of the Problem (Tier I)	191
                 Diagnosis of Large-Scale Causes (Tier II)	192
                 Diagnosis of Interactions and Forecasting (Tier III)	193
             Research  	194
                 Research To Support Characterization of the Problem (Tier I)	195
                 Research To Support Diagnosis of Large-Scale Causes (Tier II)	196
                 Research To Support Diagnosis of Interactions and Forecasting
                      (Tier III)	197
                 Research To Support Development of Policy and Environmental
                      Remediation Programs	197
             Summary	198

        Chapter 10—References	199
National Coastal Condition Report

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Acronyms
ADEM         Alabama Department of Environmental Management
ALAMAP-C    Alabama's Monitoring and Assessment Program-Coastal
ANS           Aquatic Nuisance Species
AOC           Great Lakes Areas of Concern
AVHRR        advanced very high resolution radiometer
BEACH        EPA's Beaches Environmental Assessment, Closure, and Health Program
C2000         EPA's National Coastal Assessment
CAST          Council for Agricultural Science and Technology
CCMP         NEP Comprehensive Conservation and Management Plan
CENR         Committee on Environment and Natural Resources
CIIMMS       Cook Inlet Information Management and Monitoring System
CISnet         Coastal Intensive Site Network
CRTF          U.S. Coral Reef Task Force
CU            cataloging unit
CWAP         Clean Water Action Plan
CWPPRA      Coastal Wetlands Planning, Protection, and Restoration Act
CZM           Coastal Zone Management
DCE           1,2-dichloroethane
DDD           dichloro bis(p-chlorophenyl)ethane
DDE           dichlorodiphenyldichloroethane
DDT           dichlorodiphenyltrichloroethane
DIN           dissolved inorganic nitrogen
DO            dissolved oxygen
DOI           Department of the Interior
DRBC         Delaware River Basin Commission
EEZ           Exclusive Economic Zone
EFH           essential fish habitat
EMAP         Environmental Monitoring and Assessment Program
EMAP-E       Environmental Monitoring and Assessment Program-Estuaries
ERL           Effects  Range Low (concentration of a contaminant potentially having adverse
               effects)
ERM           Effects  Range Medium (concentration of a contaminant associated with adverse
               effects on organisms)
EPA           U.S. Environmental Protection Agency
ESA           Endangered Species Act
FDA           U.S. Food and Drug Administration
FWS           U.S. Fish and Wildlife Service
CIS            geographic  information system
GLIFWC       Great Lakes Indian Fish and Wildlife Commission
GLNPO        Great Lakes National Program Office
                                                                National Coastal Condition Report

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Acronyms
       GLWQA       Great Lakes Water Quality Agreement
       GMP          Joint Gulf States Comprehensive Monitoring Program
       GNP          Gross National Product
       IJC            International Joint Commission
       IWI           EPA's Index of Watershed Indicators
       LaMP          Lakewide Management Plan
       MODMON    Neuse Monitoring and Modeling Project
       MPA          Marine Protected Area
       MPN          most probable number
       MWRA        Massachusetts Water Resources Authority
       NAS           nonindigenous aquatic species
       NASQAN      National Stream Water Quality Accounting Network
       NAWQA       National Water Quality Assessment
       NEP           National Estuary Program
       NERRS        National Estuarine Research Reserve System
       NLFWA       National Listing of Fish and Wildlife Advisories
       NMFS         National Marine Fisheries Service
       NMS          National Marine Sanctuary
       NOAA         National Oceanic and Atmospheric Administration
       NOS          NOAAs National Ocean Service
       NOX           nitrogen oxides
       NRC          National Research Council
       NS&T         National Status and Trends Program
       NSTC          National Science and Technology Council
       NWI          National Wetlands Inventory
       NWIFC        Northwest Indian Fisheries Commission
       OST           EPA's Office of Science and Technology
       OWOW       EPA's Office of Wetlands, Oceans, and Watersheds
       PAHs          polycyclic aromatic hydrocarbons
       PCBs          polychlorinated biphenyl congeners
       POTW         publicly owned treatment works
       PSAMP        Puget Sound Ambient Monitoring Program
       RAP           Remedial Action Plan
       RMP          Regional Monitoring Program
       SAV           submerged aquatic vegetation
       SCB           Southern California Bight
       SCBPP         Southern California Bight Pilot Project
       SCCWRP      Southern California Coastal Water Research Project
       SCDHEC      South Carolina Department of Health and Environmental Control
       SCDNR       South Carolina Department of Natural Resources
      National Coastal Condition Report

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                                                                                      Acronyms
SCECAP       South Carolina Estuarine and Coastal Assessment Program
SFEP           San Francisco Estuary Project
SJBEP          San Juan Bay Estuary Program
SOLEC         State of the Lakes Ecosystem Conference
SVOC          semivolatile organic compounds
SWMP         NERRS System-Wide Monitoring Program
TCE           tetrachloroethane
TMDL         Total Maximum Daily Load
USDA          United States Department of Agriculture
USGS          United States Geological Survey
UWA          Unified Watershed Assessments
VOC           volatile organic compounds
WDFW        Washington Department of Fish and Wildlife
WDOE         Washington Department of Ecology
WSRI          Wild Stock Restoration Initiative
                                                               National Coastal Condition Report

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Executive Summary
          The U.S. Department of Agriculture (USDA), the U.S.
        Environmental Protection Agency (EPA), and seven other federal
        agencies developed a Clean Water Action Plan to protect public
        health and restore our nation's waterways through 111 key actions.
        Included in those waterways are our coastal waters, and the Action
        Plan contains several key actions related to coastal waters. Key Action
        No. 60 calls for the development of a comprehensive report on the
        condition of the nation's  coastal waters. This National Coastal
        Condition Report fulfills  that key action of the Clean Water Action
        Plan and also serves as  a foundation for the current administration's
        efforts to protect, manage, and restore coastal ecosystems. Four federal
        agencies and several state and regional/local organizations have come
        together to report on the current condition of the nation's coasts.
          This National Coastal Condition report compiles several available
        data sets from different agencies and areas of the country and
        summarizes them to present a broad baseline picture of the
        condition of coastal waters. Although data sets presented in this
        report do not cover all  coastal areas with respect to all ecological
        issues of concern, they  do tell a story about coastal conditions
        from a multiregional perspective. For example, EPA's Environmental
        Monitoring and Assessment Program (EMAP) has monitoring data
        for the Virginian, Louisianian, and Carolinian provinces, which
        encompass 70% of continental U.S. estuarine acreage (or about 18%
        of U.S. estuarine acreage if Alaska is included). This report will serve

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Executive Summary
       as a useful benchmark for analyzing the
       progress of coastal programs in the future and
       will be followed in subsequent years by reports
       on more specialized coastal issues.
         Currently, comprehensive and nationally
       consistent data on the condition of coastal
       waters are not available for all coastal regions
       of the United States. However, we can begin
       to describe the condition of our nation's coasts
       using data for some variables that have been
       measured consistently across a number of
       regions. These data are derived largely from
       a combination of ongoing federal and state
       coastal monitoring programs. In this report,
       the condition of coastal waters is described
       based primarily on data from estuaries, which
       are the productive transition areas between
       freshwater rivers and the ocean.
           >verall National
         Coastal Condition
  Although the objective of this report is
to evaluate the condition of coastal resources
(in this case, primarily estuaries) on a national
level, there is sufficient information to assess
completely only northeastern, southeastern,
and Gulf of Mexico estuaries. Partial assess-
ments are possible for West Coast estuaries
and the Great Lakes, and no assessment is
currently possible for the estuarine systems
of Alaska, Hawaii, and island territories
(Figure ES-1). In order to do a complete
assessment of coastal resources for a region
of the  country, data that are representative of
the entire resource are required. Obtaining the
data needed for estuarine assessment generally
requires a particular type of monitoring that
is now used in all 24 coastal states, but not yet
in the  Great Lakes region.
              Water Clarity
              Dissolved Oxygen
              Eutrophic Condition
              Sediment
          No indicator data available.
        ** Does not include the hypoxic zone in offshore Gulf of Mexico waters
       Figure ES-I. Overall national coastal condition.
      National Coastal Condition Report

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                                                                                   Executive Summary
Summary of the Findings

  Thousands of pieces of information on the
condition of the estuarine and Great Lakes
resources of the United States were collected
from 1990 to 1997. Many of these data were
analyzed to develop the assessment described
in this report. Statistically and ecologically
consistent and representative data were
collected representing all of the estuarine
resources in the Northeast, Southeast, and
Gulf of Mexico, and data representing selected
locations were collected throughout the
remainder of the country. The resulting
ecological assessment of the nation's estuaries
using these mked data sets shows estuaries
to be in fair to poor condition, varying from
poor conditions in the Northeast to fair
conditions in the Southeast. No overall
assessments were completed for Alaska,
Hawaii, or the island territories. New
ecological monitoring programs, both
proposed and in place, will permit a
comprehensive and consistent overall
assessment of all the nation's coastal
resources by 2005.
  The major findings of the 1990 to 1997
study period are as follows:

   • Overall condition of the nation's
     estuaries was fair based on seven basic
     indicators of ecological condition—
     water clarity, dissolved oxygen, loss of
     coastal wetlands, eutrophic condition,
     sediment contamination, benthic
     condition, and accumulation of
     contaminants in fish tissue.
• Fifty-six percent of assessed estuarine
  resources were in good condition while
  44% were characterized by impaired
  human use or impaired aquatic life use.

• Generally, the nation's coastal areas
  were rated as poor if the mean
  conditions for these seven indicators
  showed that greater than 20% of the
  estuarine area in that region was
  degraded.

• Indicators that showed the poorest
  condition throughout the United States
  were coastal wetland loss, eutrophic
  condition, and benthic condition.
  Indicators that showed the best
  condition generally were water clarity
  and dissolved oxygen concentrations.

• These areal estimates represent over
  70% of the estuarine area of the
  conterminous United States (all areas
  except New England and the West
  Coast). Consistent and comprehensive
  surveys are currently being conducted
  throughout all coastal states (including
  Alaska, Hawaii, and Puerto Rico), and
  the results of these surveys will be
  available in 2004. Consistent and
  comprehensive surveys of the nation's
  offshore waters (0-12 miles) are being
  planned for 2002, and the results will
  be available (assuming survey
  completion) in 2005.
                                                                  National Coastal Condition Report

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Executive Summary
           Tables ES-1 and ES-2 summarize the
        estimates of areal degradation by region and
        nationally and the  rating scores, respectively,
        for each indicator.
Table ES-I. Percent Area of Degradation3 by Indicator and Region
Indicator
Water Clarity
Dissolved Oxygen
Coastal Wetland
Loss
Contaminated
Sediments
Benthos
Fish Tissue
Contaminants0
Eutrophic
Condition
Overall
Northeast
6
5
39
41
23
30
60
43
Southeast
12
2
40
13
17
9
13
46
Gulf of Mexico West
22 
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                                                                          Executive Summary

    Overall
    National
  Good  Fair
            Poor
B
     Water Clarity
     Dissolved Oxygen
     Coastal Wetlands
     Eutrophic Condition
     Sediment
     Benthos
     Fish Tissue
Figure ES-2. The overall
estuarine condition for
the nation is fair
                                Describing
                                 Coastal
                                  /
                                 Condition
  This report presents two types of data: (1) coastal
monitoring data from programs like EMAP and the
National Oceanic and Atmospheric Administration
(NOAA) National Status & Trends Program (NS&T)
that have been analyzed for this report and used to
develop indicators of condition and (2) assessment
and advisory data provided by states or other
regulatory agencies and compiled in nationally
maintained databases. Because the assessment
and advisory data are contributed by different
agencies that use different methodologies and
criteria for assessment, they cannot be used for a
broad-based comparison between different coastal
areas. The data are presented in this report because
they provide information about designated use
support (e.g., is it safe to swim in an estuary),
which affects public perception of coastal condition.
These data also present coastal condition as it relates
to public health.
  The overall condition of the nation's coasts
based on available data is fair (Figure ES-2). This
assessment was made based on (1) EMAP sampling
of environmental variables over 8 years (1990-1997)
at more than 1,000 random probability-based sites
representing 70% of all estuarine areas in the
continental United States and (2) other monitoring
and advisory data from EPA, NOAA, the U.S.
Geological Survey (USGS), U.S. Fish and Wildlife
Service (FWS), and state and tribal  programs.
                                                           National Coastal Condition Report

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Executive Summary
          Seven primary indicators are used to rate
       coastal condition in this report: water clarity,
       dissolved oxygen, coastal wetland loss,
       eutrophic condition, sediment contamination,
       benthic index, and fish tissue contaminants
       (Table ES-3). Supplemental information (e.g.,
       algae concentrations, sediment toxicity, fish
       pathology data) are  also presented throughout
       the report where available. The seven
       indicators were assigned a score of good,
       fair, or poor for each coastal area of the
       United States  (Northeast, Southeast, Gulf of
       Mexico, West Coast, and Great Lakes areas)
       (Figure ES-2). The indicator scores were then
       averaged to create an indicator score for
       overall condition of each coastal area. The
       assessments for each coastal area were
       combined to form national scores
       by calculating an average weighted by the
       amount  of estuarine area in each coastal
       region (excluding Alaska).
                                                    The use of indicators to describe coastal
                                                 condition is experimental in nature. In this
                                                 report, the overall condition for each coastal
                                                 area is assessed using a straightforward
                                                 combination of the seven indicator scores.
                                                 Continued research is necessary to establish
                                                 the most appropriate indicators to use in
                                                 describing coastal condition and the appro-
                                                 priate weighting factors for combining them
                                                 for an overall assessment.
                                                        Sediment Contaminant Criteria
                                                      ERM (Effects Range Medium) —
                                                      The concentration of a contaminant
                                                      that will result in ecological effects
                                                      approximately 50% of the time
                                                      based on literature studies.
                                                      ERL (Effects Range Low)—The
                                                      concentration of a contaminant that
                                                      will result in ecological effects about
                                                      10% of the time.
             Caution
              about
             Indicator
               Data
             Using indicators to compare
                estuarine conditions
                  throughout the nation
                  can be misleading because
                the natural state of estuaries
             varies throughout the nation.
           For example, estuaries in the
         Southeast tend to have poor water
clarity due to high turbidity that  results from
naturally high productivity and strong sediment
transport and resuspension processes. So
the "fair" water clarity rating in southeastern
estuaries does not necessarily mean that water
quality is poor or degraded.
      National Coastal Condition Report

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                    Executive Summary
Table ES-3. Indicators Used To Assess Coastal Condition
Icon
Water Clarity

O2
Dissolved
Oxygen
Coastal
Wetland
Loss
IEutrophic
Condition
Sediment
Contamination

&
Benthic Index

-
Fish Tissue
Contaminants
Poor Condition
Water clarity is considered poor if less
than 10% of surface light reaches a depth
of 1 meter.
Dissolved oxygen levels are considered
poor when concentrations are less than
2 ppm.
Areas with a greater than 40% decline in
wetland acreage from 1 780 to 1 980 and/or
a greater than 10% decline from the
mid- 1 970s to the mid- 1 980s are
considered to be in poor condition.
Eutrophic condition is a measure
developed by NOAA that examines six
different eutrophication symptoms and
assigns a value of low, moderate, or high.
High eutrophic condition is equivalent
to poor condition for this indicator.
Sediment contamination is evaluated
using ERM and ERL criteria. ERM is the
concentration of contaminant that will
result in ecological effects 50% of the time.
ERL is the concentration of contaminant
that will result in ecological effects 10%
of the time. An estuary is in poor condition
if it exceeds one ERM criterion or five
ERL criteria.
A poor benthic index score indicates that
benthic communities are less diverse than
expected, populated by greater than
expected pollution-tolerant species, and
contain fewer than expected pollution-
sensitive species.
An estuary is in poor condition for fish
tissue contaminants if more than 10% of
fish sampled have tissue residues greater
than FDA and international criteria or
more than 20% of fish sampled have tissue
residues greater than EPA Guidance Values.
Ranking
Good: Less than 10% of the coastal waters have poor
light penetration.
Fair: 10% to 25% of the coastal waters have poor light
penetration.
Poor: More than 25% of the coastal waters have poor
light penetration.
Good: Less than 5% of the coastal waters have poor
dissolved oxygen.
Fair: 5% to 1 5% of the coastal waters have poor
dissolved oxygen.
Poor: More than 1 5% of the coastal waters have poor
dissolved oxygen.
Good: Less than 25% decline in wetland acreage from
1780 to 1980 and/or less than 5% decline
from the mid-1970s to the mid-1980s.
Fair: Between 25% and 40% decline from 1780 to 1980
and/or between 5% and 10% decline from the
mid- 1 970s to the mid- 1 980s.
Poor: Greater than 40% decline from 1780 to 1980
and/or greater than 10% decline from the
mid- 1 970s to the mid- 1 980s.
Good: Less than 10% of the coastal waters have
high eutrophic condition.
Fair: 1 0% to 20% of the coastal waters have
high eutrophic condition.
Poor: More than 20% of the coastal waters have
high eutrophic condition.
Good: Less than 5% of the coastal waters exceed
one ERM criterion or five ERL criteria.
Fair: 5% to 1 5% of the coastal waters exceed one
ERM criterion or five ERL criteria.
Poor: More than 1 5% of the coastal waters exceed
one ERM criterion or five ERL criteria.
Good: Less than 10% of the coastal waters have
a low benthic index score.
Fair: 1 0% to 20% of the coastal waters have a low
benthic index score.
Poor: More than 20% of the coastal waters have
a low benthic index score.
Good: Less than 2% of the coastal waters have poor
fish tissue condition.
Fair: 2% to 10% of the coastal waters have poor
fish tissue condition.
Poor: More than 1 0% of the coastal waters have
poor fish tissue condition.
National Coastal  Condition Report

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Executive Summary
       Coastal Monitoring Data

         About 56% of the estuarine area in the
       continental United States is in good condition
       for supporting aquatic life use (animal and
       plant communities) and human uses (such
       as drinking water, agriculture, swimming,
       and boating) (Figure ES-3). About 34% of
       the estuarine area shows evidence of impaired
       aquatic life use, and 33% of the area shows
       evidence of impaired human use. In fact,
       23% of estuarine area in the continental
       United States is degraded for both aquatic
       life and human uses.
           Unimpaired
              56%
                              Impaired Human and
                               Aquatic Life Use
                                   23%
Impaired Aquatic
   Life Use
     11%
                               Impaired Human Use
                                     10%
       Figure ES-3. National estuarine condition (U.S. EPA/EMAP).
         The overall water clarity of the nation's
       estuaries is rated as good. Water clarity is good
       in West Coast and northeastern estuaries as
       well as the Great Lakes, but fair in the Gulf of
       Mexico and southeastern estuaries. Dissolved
       oxygen condition (using occurrence of
       hypoxia as a standard) in the nation's
       estuaries is generally good.
         Coastal wetland losses throughout the
       United States have been significant, and this
       indicator receives a poor rating. During the
       200-year period from 1780 to 1980, nearly
       50% of the existing wetlands in the
       conterminous United States were lost.
  The overall score for eutrophic condition
of estuarine waters for the nation is poor.
Eutrophication in estuarine waters is
increasing throughout much of the United
States. All coastal areas are in poor condition
as rated by eutrophic condition, except for the
Southeast, which is in fair condition, and
Alaska and Hawaii, which were not evaluated.
  Sediment contaminant concentrations
are generally poor throughout the estuaries
and Great Lakes of the United States. Eleven
to thirty percent of estuarine sediments in the
United States show concentrations of
contaminants (polycyclic aromatic hydro-
carbons [PAHs], polychlorinated biphenyls
[PCBs], pesticides, and metals) that are above
guidance levels (concentrations that are likely
to result in biological effects). Most of the
sample sites that displayed the greatest
exceedances are in the Northeast. Measure-
ments of sediment enrichment due to human
sources  show that 40% of U.S. estuarine
sediments are enriched with metals, 45% are
enriched with PCBs, and 75% are enriched
with pesticides (note that these percentages
exclude Alaska, Hawaii, and the Great Lakes).
  Benthic condition is poor in estuaries
throughout the United States, largely due
to contaminated sediments, low dissolved
oxygen conditions, habitat degradation,
and eutrophication. Benthic condition
in the Great Lakes is also poor.
  The overall rating for fish tissue contaminants
for the nation is fair. Fish tissue contaminant
concentrations are generally low throughout
the estuarine waters of the United States with
the exceptions  of the northeastern estuaries,
the Gulf of Mexico, and the Great Lakes.
      National Coastal Condition Report

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                                                                                        Executive Summary
Assessment and Advisory Data
   The nation's Clean Water Act Section
305(b) reporting process largely agrees with
the assessment based on coastal monitoring
data. States and tribes rate water quality for
Clean Water Act reporting by comparing
available water quality data to their water
quality standards (water quality standards
include narrative and numeric criteria that
support specific designated uses, such as
swimming and aquatic life use). Each state has
different monitoring resources and uses a
different methodology for assessment, so this
information is not nationally consistent
and is often incomplete. State 1998 water
quality reports suggest that 44% of assessed
estuaries and  12% of assessed coastal
shoreline in the United States (excluding
Alaska) was impaired by some form of
pollution or habitat degradation. The most
frequent use impairments were for aquatic
life support, primary contact recreation
(swimming), and fish consumption.
The leading stressors resulting in these
impairments were pathogens, oxygen-
depleting substances (oxygen is consumed
during the degradation of organic  matter
and the oxidation of some inorganic matter),
metals, and nutrients (Figure ES-4). The
primary sources of impairing pollutants
reported by states were municipal point
sources, urban runoff or storm sewers,
atmospheric deposition, industrial
discharges, and agriculture.
   The number of coastal and estuarine
waters under fish consumption advisories
represents an  estimated 71% of the coastline
miles of the contiguous 48 states, including
92% of the Atlantic Coast, 100% of the
         Total Estuaries
        90,465 Square Miles
        Assessed Estuaries
        28,687 Square Miles
                                                  12,482
                                                 Square
                                                  Miles
 Leading Pollutants/Stressors of Estuary Impairment
        Pathogens (Bacteria)
   Oxygen-Depleting Substances
                                              47%
                                           41%
                Metals
              Nutrients
       Thermal Modifications
                 PCBs
 Priority Toxic Organic Chemicals
                                    27%
      23%
   18%
I 1%
                     0    10    20    30    40    50    60
                        Percent of Impaired Estuarine Square Miles
 Leading Sources of Estuary Impairment
      Municipal Point Sources
    Urban Runoff/Storm Sewers
      Atmospheric Deposition
        Industrial Discharges
              Agriculture
      Land Disposal of Wastes
    Combined Sewer Overflow
        28%
    J 23%
11%
                     0    10    20    30    40    50    60
                        Percent of Impaired Estuarine Square Miles
Figure ES-4. 1998 305(b) water quality assessment data for estuaries.
                                                                       National Coastal Condition Report

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Executive Summary
       Gulf Coast, and 10% of the Pacific Coast. An
       estimated 82% of the estuarine square miles
       also were under advisory, including 81% of
       Atlantic Coast estuaries, 64% of Gulf Coast
       estuaries, and 30% of Pacific Coast estuaries
       (Figure ES-5).
         In 1995,4,230 individual shellfish-growing
       areas containing 24.8 million acres of
       estuarine and nonestuarine growing waters
       were classified in 21 coastal states. Sixty
       percent of waters were classified as approved
       (Figure ES-6). The top five pollution sources
       reported as contributing to harvest limitations
       were urban runoff, upstream sources, precipi-
       tation-related runoff of animal wastes from
       high-wildlife-concentration areas (e.g., water
       fowl), individual wastewater treatment
       systems, and wastewater treatment plants.
  EPA's review of coastal beaches (U.S. coastal
areas, estuaries, and the Great Lakes) showed
that, of the 1,444 beaches responding to the
survey, more than 370 beaches, or 26%, had an
advisory and/or closing in effect at least once
during 1999 (Figure ES-7). Approximately
13% of the coastal beaches experienced at
least one closure. Beach closures were issued
for a number of different reasons, including
sewage, elevated bacterial levels, and
preemptive reasons. The major causes
of beach closures included stormwater
runoff, pipeline breaks, combined sewer
overflows, and unknown causes.
t<3
*^
o
Hawaii




4-
American Samoa
                                                                                      Number of
                                                                                      Advisories per
                                                                                      USGS Cataloging
                                                                                      Unit
                                                                                          I
                                                                                          2-4
                                                                                          5-9
                                                                                          No Advisories
       Figure ES-5. The number of coastal and estuarine fish consumption advisories per USGS cataloging unit. This count does not include
       advisories that may exist for noncoastal or nonestuarine waters. Alaska did not report advisories (U.S. EPA NLFWA, 2000c).
      National Coastal Condition Report

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                                                                                      Executive Summary
     Approved
        60%
Prohibited 11%

     Unclassified 13%

      Restricted 9%

    Conditionally
    Approved 7%
         Fair
Figure ES-6. 1995 classification of shellfish-growing waters
(NOAA).
Shortcomings of

Available Data
  Very little information to support the kind
of analysis used in this report (i.e., spatial
estimates of condition based on indicators
measured consistently across broad regions)
exists for estuarine conditions in Alaska.
Nearly 75% of the area of all the bays, sounds,
and estuarine areas in the United States is
located in Alaska, and no national report on
estuarine condition can be truly complete
without information on the condition of
living resources and use attainment of these
waters. Similarly, little information to support
estimates of conditions based on the indicators
                                                                         Of beaches
                                                                         responding to the
                                                                         survey, the percent
                                                                         closed in each
                                                                         state at least once
                                                                         in 1999:
                                                                          Q 0-10
                                                                          Q 11-50
                                                                             | 51-100
                                                                              nNo Data
                                                                              Available
                                                                           %  Beach Closure
                                                                              in 1999
Figure ES-7. The percentage of beaches responding to the survey that closed at least once in 1999. There were no BEACH survey
responses from Alaska (U.S. EPA).
                                                                     National Coastal Condition Report

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Executive Summary
       used in this report is available for Hawaii
       and the Caribbean/Pacific commonwealths.
       Although these latter systems make up only
       a small portion of the nation's estuarine area,
       they do represent a unique set of estuarine
       subsystems (such as coral reefs and tropical
       bays) that are not located anywhere else
       in the United States with the exception of
       the Florida Keys and the Flower Gardens.
       These unique systems should not be excluded
       from future national assessments, and plans
       are already under way for monitoring
       programs in Alaska, Hawaii, and Puerto Rico.
         Attaining consistent reporting in all of
       the coastal ecosystem in the United States
       depends on our ability to focus fiscal and
       intellectual resources on the creation of a
       national coastal monitoring program. The
       conceptual framework for such a program is
       outlined in the National Coastal Research and
       Monitoring Strategy (www.cleanwater.gov).
       This Strategy calls for a national program
       organized at the state level  and carried out
       by a partnership between federal agencies
       (EPA, NOAA, USGS, U.S. Department of the
       Interior  [DOI], and USDA) and state natural
       resource agencies, as well as with academia
       and industry. This monitoring program would
       provide the capability to measure, understand,
       analyze, and forecast ecological change at
       national, regional, and local scales. A first
step in the development of this type of
program was the initiation of EPA's Coastal
2000 program, a national estuarine moni-
toring program organized and executed
at the state level. However, this program is
merely a starting point for what is needed
to achieve a comprehensive national coastal
monitoring program that can offer a
nationwide coastal assessment.
  This report represents our current best
effort to characterize and assess the condition
of the nation's estuarine resources; however,
the report is incomplete because it cannot
represent all estuarine regions of the United
States or all of the appropriate spatial scales
(national, regional, and local) necessary
to assess the condition of estuaries. This
assessment is also based on  a limited number
of ecological indicators for which there are
consistent data sets available to support
estimates of ecological condition on regional
and national scales. Through a multiagency
and multistate effort over the next decade,
a truly consistent, comprehensive, and
integrated national coastal monitoring
program can be realized. Only through
the cooperative interaction of the key federal
agencies and coastal states will our next
effort to gauge the health of America's
coastal ecosystem be successful.
      National Coastal Condition Report

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      Chapter
                               Introduction

  The Clean Water Action Plan (U.S. EPA, 1998) is intended to "protect
public health and restore our nation's waterways" by setting strong goals
and providing states, tribes, communities, and individual land owners
with the tools and resources to meet these goals.
  Several coast-related action items
are recommended in the Action Plan's
111 key actions. This report is designed
to fulfill action No. 60, which calls for the
development of a comprehensive report
to the public on the condition of the
nation's coastal waters to be prepared by
the National Oceanic and Atmospheric
Administration  (NOAA), the U.S.
Environmental Protection Agency (EPA),
the Department of the Interior (DOI),
and the U.S. Department of Agriculture (USDA) in cooperation with other
federal agencies, states, and tribes.
  The current condition of our nation's coasts can be explored using
data provided by several existing coastal programs. For example, EPA's
Environmental Monitoring and Assessment Program (EMAP) and NOAA's
Status and Trends  Program (NS&T) provide data for many indicators of
coastal condition for nearly 70% of the estuarine area of the conterminous
United States.

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Why Are  Coastal
Waters Important?
                           Our Nation's Coasts Are
                           Valuable and Productive
                           Natural Ecosystems
                             Coastal waters are productive and diverse, including
                           estuaries, coastal wetlands, coral reefs, mangrove forests,
                           and upwelling areas. Critical coastal habitats provide
                           spawning grounds, nurseries, shelter, and food for fmfish,
                           shellfish, birds, and other wildlife. Our coasts also provide
                           essential nesting, resting, feeding, and breeding habitat for
                           85% of waterfowl and other migratory birds.
   Estuaries are bodies of water that are balanced
 by freshwater and sediment influx from rivers and
 the tidal actions of the oceans, thus providing transition
 zones between the fresh water of a river and the saline
 environment of the sea. This interaction produces
 a unique environment that supports wildlife and
 fisheries and contributes substantially to the economy
 of coastal areas.

   Wetlands are the vegetated interface between the aquatic
 and terrestrial components of estuarine systems. Wetland
 habitats are critical to the life cycles of fish, shellfish,
 migratory birds, and other wildlife, and they help improve
 surface water quality by filtering residential, agricultural,
 and industrial wastes. Wetlands also serve to buffer coastal
 areas against storm and wave damage. Because of their close
 interface with terrestrial systems, wetlands are vulnerable
 to land-based sources of pollutant discharges and other
 human activities.
Female humpback whales and their calves
are sometimes accompanied by a single
adult male humpback whale, otherwise
known as an "escort" whale.This escort
protects the female and her calf from
other whales and may sometimes attempt
to mate with her (Photo: Joseph Mobely -
NMFS Permit #810).
  National Coastal Condition Report

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                                                                               Chapter 1   Introduction
  More Than Half of
  the U.S. Population
  Lives on the Coast

     Coastal areas are the most developed areas
  in the nation. This narrow fringe—only 17%
  of total contiguous U.S. land area—is home
  to more than 53% of the nation's population
  (Figure 1-1). This means that over half of the
  U.S. population lives in less than one-fifth of
  its total area (NRG, 2000). Further, this coastal
  population is increasing by 3,600 people
  per day, giving a projected total increase of
  27 million people between now and 2015.
  This rate of growth is faster than that for
  the nation as a whole (Figure 1-2).
       Figure l-l. Population
       distribution in the United
       States (NRC, 1993).
                                   • Coastal
                                   D Noncoastal
                                               Photo: ® JohnTheilgard
  In addition to being a popular place
to live, the U.S. coasts are a source of many
other valuable commodities. Almost 31%
of the Gross National Product (GNP) is
produced in coastal counties. Almost 85%
of commercially harvested fish depend on
estuaries and nearby coastal waters at some
stage in their life cycle (NRC, 1997). Beaches
have become one of the most popular vacation
destinations in America, with 180 million
people using the coast each year (Cunningham
and Walker, 1996). Estuaries supply water,
provide a point of discharge for municipalities
and industries, and support agriculture,
commercial and sport fisheries, and
recreational uses such as swimming,
diving, and boating.
                   Year

Figure 1-2. Population density from 1960 to 201 5 (NOAA, 1998).
                                                                    National Coastal Condition Report

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Chapter 1
Introduction
       U.S. coastal waters are the largest economic and
       environmental zone of the nation in terms of surface
       area. These valuable coastal resources provide

       • Habitat for a wide range of plant and animal
         species that are essential to the global ecosystem
       • Fish and shellfish that support the majority
         of commercial and recreation fisheries
       • Reserves of oil, gas, and other minerals
       • Travel ways for coastal and international shipping
         and  maneuvering area for the U.S. Navy
       • Outdoor recreational opportunities such as
         swimming and boating
       • A basis for tourism and recreation industries.

       (ADEM, 1998)
     Why Be Concerned about Coastal Condition?
       Because a disproportionate percentage of the
    nation's population lives in coastal areas, the activities
    of municipalities, commerce, industry, and tourism have
    created environmental pressures that threaten the very
    resources that make the coast desirable. Population
    pressures include increased solid waste production, higher
    volumes of urban nonpoint runoff, loss of green space and
    wildlife habitat, declines in ambient water and sediment
    quality, and increased demands for wastewater treatment,
    potable water, and energy supplies.
       Development pressures have resulted in  substantial
    physical changes along many areas of the coastal zone.
    Coastal wetlands continue to be lost to residential and
    commercial development, while the quantity and timing
    of freshwater flow, critical to river and estuarine function,
    continue to be altered.
                                                     In  1998, states reported that
                                                     the leading pollutants!stressors
                                                     impairing estuaries were
                                                      • Pathogens
                                                      • Oxygen-depleting substances
                                                      • Metals
                                                      • Nutrients
                                                      • Thermal modifications
                                                      • PCBs
                                                      • Priority toxic organic
                                                        chemicals
      National Coastal Condition Report

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                                              Chapter 1   Introduction
Indicators  of
Coastal  Condition

  This report examines several available data sets from different
agencies and areas of the country and summarizes them to present a
broad baseline picture of the condition of coastal waters. Two different
types of data are presented in this report:
• Coastal monitoring data from programs like EMAP and NOAA NS&T
  that have been analyzed for this report and used to develop indicators
  of condition
• Assessment and advisory data provided by states or other regulatory
  agencies and compiled in national databases.
  Available coastal monitoring information is presented on a national
scale for the conterminous United States; these data are then broken
down  and analyzed at four geographic levels: Northeast Coast, Southeast
Coast, Gulf Coast, and West Coast (Figure 1-3). Chapters presenting
                                      Great Lakes
                                      Coastal Area
                                                     Northeast
                                                      Coastal
                                                       Area
                                                Southeast
                                                Coastal
                                                 Area
                                           \\\
                               Gulf Coastal Area
                           v-i
Alaska, Hawaii, and Island Territories
       Figure 1-3. Coastal areas presented in the chapters of this report.

available data for Alaska, Hawaii, and Island Territories, as well as the
Great Lakes, are also included. The assessment and advisory data are
presented at the end of each chapter. Although inconsistencies in the
way different agencies collect and provide data to these national
programs prevent their use for comparing conditions between coastal
areas, the information is valuable in that it helps identify and illuminate
some of the causes of coastal impairment and the impacts of these
impairments on human uses.
                                   National Coastal Condition Report

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Chapter 1
Introduction
       Shortcomings of

       Available Data
         Very little information to support the kind
       of analysis used in this report (i.e., spatial
       estimates of condition based on indicators
       measured consistently across broad regions)
       exists for estuarine conditions in Alaska.
       Nearly 75%  of the area of all the bays, sounds,
       and estuarine areas in the United States is
       located in Alaska, and no national report
       on estuarine condition can be truly complete
       without information on the condition of
       living resources and use attainment of these
       waters. Similarly, little information to support
       estimates of  conditions based on the indicators
       used in this  report is available for Hawaii and
       the Caribbean/Pacific commonwealths.
       Although these latter systems make up only
       a small portion of the nation's estuarine area,
       they do represent a unique set of estuarine
       subsystems (such as coral reefs and tropical
       bays) that are not located anywhere else
       in the United States  with the exception of
       the Florida Keys and the Flower Gardens.
       These unique systems should not be excluded
       from future  national assessments, and plans
       are already under way for monitoring
       programs in Alaska, Hawaii, and Puerto Rico.
         Attaining  consistent reporting in all of
       the coastal ecosystems in the United States
       depends on  our ability to focus fiscal and
       intellectual resources on the creation of a
       national coastal monitoring program. The
       conceptual framework for such a program is
       outlined in the National Coastal  Research and
       Monitoring  Strategy (www.cleanwater.gov).
       This Strategy calls for a national  program
                                             organized at the state level and carried out
                                             by a partnership between federal departments
                                             and agencies (EPA, NOAA, DOI, and USDA)
                                             and state natural resource agencies, as well as
                                             with academia and industry. This monitoring
                                             program would provide the capability to
                                             measure, understand, analyze, and forecast
                                             ecological change at national, regional, and
                                             local scales. A first step in the development
                                             of this type of program was the initiation
                                             of EPA's Coastal 2000 program, a national
                                             estuarine monitoring program organized
                                             and executed at the state level. However, this
                                             program is merely a starting point for what
                                             is needed to achieve a comprehensive national
                                             coastal monitoring program that can offer a
                                             nationwide coastal assessment.

                                             Coastal Monitoring Data

                                               Data from several programs are used to
                                             evaluate coastal condition throughout this
                                             report. A large percentage of the data come
                                             from programs administered by EPA and
                                             NOAA. EPA's EMAP provides data on biota
                                             (plankton, benthos, and fish) as well as
                                             environmental stressors (water quality,
                                             sediment quality, and tissue bioaccumulation).
                                             NOAA's NS&T provides data on toxic
                                             contaminants and their ecological effects.
                                             NOAA also conducted the National Estuarine
                                             Eutrophication Assessment in the mid-1990s
                                             to assess the effects of nutrient concentrations
                                             based on existing data and expert opinion.
                                             Coastal condition is also evaluated using
                                             information from the U.S. Fish and Wildlife
                                             Service (FWS) National Wetlands Inventory
                                             (NWI). The NWI provides information on
                                             the status of the nation's wetlands.
      National Coastal Condition Report

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                                                                                   Chapter 1
                                         Introduction
  Data from these programs were used to
evaluate overall coastal condition with respect
to seven primary indicators: water clarity,
dissolved oxygen, coastal wetland loss,
eutrophic condition, sediment contaminants,
benthic condition, and fish tissue contam-
inants. These indicators were selected because
of the availability of relatively consistent data
sets for these indicators for most of the
country. These indicators do not address all
characteristics of estuaries and coastal waters
that are valued by society, but they do provide
information on both ecological condition
and human use of estuaries. In some areas,
additional information, such as algae
concentration and sediment toxicity data,
is also available. These data are also presented
where available to help provide an overall
picture of the condition of the estuaries.
  If multiple programs provided data for
the same indicator (e.g., dissolved oxygen),
program information that was quantitative
was used over qualitative data in the assess-
ment. If multiple sets of quantitative data
existed, information based on quantitative
field measurements was used over question-
naire data in this assessment.
How the Indicators Are Calculated
  Overall condition for each coastal area was
calculated by summing the scores for the seven
indicators and dividing by 7, where good = 5,
fair = 3, and poor = 1. The Gulf Coast, for
example, received the following scores:



02
^

• -, ;•'
m
•**•
Indicator
Water Clarity
Dissolved Oxygen
Coastal Wetland Loss
Eutrophic Condition
Sediment Contamination
Benthic Index
Fish Tissue Contaminants
Score
3
5
1
1
1
1
1

       Total Score Divided by 7 =
                  Overall Score
13/7=  1.86
  To create the national indicator numbers,
a weighted average for each of the seven
indicators was calculated. The indicator scores
are weighted by the percent area contributed
by each geographic area (Figure 1-4). For
example, the weighted average for water clarity
would be calculated by summing the products
of the regional water clarity scores and the
area contributed by each region.
Surveying the submerged habitat of Cordell Bank (Photo:
Cordell Bank Expeditions).
                                                          Great Lakes
                                                             28%
                                                             West
                                                              10%
                         Northeast
                           21%
                             Southeast
                               16%
                                                                    Gulf of Mexico
                                                                        25%
                                                       Figure 1-4. Percent estuarine area contributed by
                                                       each geographic area assessed in this report.
                                                                      National Coastal Condition Report

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Chapter 1
Introduction
         The overall national score was calculated
       by summing each national indicator score
       and dividing by seven, similar to the method
       described in Table 1-1.
Table l-l. Calculating the Water Clarity Indicator ^^^1
on a National Scale H^l^l
Coastal
Area
Northeast
Water
Clarity
Score
5
Percent of
Area
Contributed
by Region
21
Product of
Score and
Percent Area
105
V
Ck
:ontr
 Southeast
 Gulf of Mexico
 West
 Great Lakes
                       16
                       25
                       10
                       28
64
75
50
140
              Sum of Products Divided by Total Area  4.34/100 = 4.34
                   = National Water Clarity Score  (Good)

         Characterizing coastal areas using each
       of the seven indicators involves two value
       determinations. The first value is the
       definition of "poor" for an indicator. The
       definition of poor condition for each indicator
       is based on existing criteria, guidelines, or
       interpretation of scientific literature. For
       example, dissolved oxygen conditions are
       considered poor if dissolved oxygen
       concentrations are less than 2 ppm (2 parts of
       oxygen per million parts of water). This value
       is widely accepted as representative of hypoxic
       conditions, so this benchmark for poor
       condition is strongly supported by scientific
       evidence (Diaz and Rosenberg,  1995; U.S. EPA,
       2000a). The second determination is how
       widespread a "poor" condition must be to
       result in a poor rating for an area  as measured
       by the indicator. For example, in order for an
       area to be rated as poor with regard to the
       dissolved oxygen indicator, more than 15%
       of a coastal area must have dissolved oxygen
                                               measured at less than 2 ppm. The percent areas
                                               used for each indicator are value judgments and
                                               were largely determined by informally surveying
                                               environmental managers, resource experts, and
                                               the knowledgeable public.
      Water Clarity
  Clear waters are valued by society and
contribute to the maintenance of healthy and
productive ecosystems. Light penetration into
estuarine waters is important for submerged
aquatic vegetation, which serves as food and
habitat for the resident biota. EMAP-Estuaries
(EMAP-E) estimates water clarity using
specialized equipment that compares the amount
and type of light reaching the water surface to
the light at a depth of 1 meter. Water clarity is
considered poor if less than  10% of surface light
reaches 1 meter. (This is equivalent to being able
to see your hand 1 meter from your face under
water.) The water clarity data presented
throughout the report were collected by the
EMAP-E program unless otherwise noted. This
measure is used to determine water quality for
an area as follows:
                                                 Good


                                                 Fair

                                                 Poor
                     Less than 10% of the coastal
                     waters have poor light penetration.

                     10% to 25% of the coastal waters
                     have poor light penetration.

                     More than 25% of the coastal
                     waters have poor light penetration.
      National Coastal Condition Report

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                                                                                   Chapter 1   Introduction

       ,    ,.    Using indicators to compare estuarine conditions throughout the nation can be misleading
      /Caution\    because the natural state of estuaries varies throughout the nation. For example, estuaries in
       about  \   the Southeast tend to have poor water clarity due to high turbidity that results from
      Indicator/   naturally high productivity and strong sediment transport and resuspension processes.
                  So the "fair" water clarity rating in southeastern estuaries does not necessarily mean that
               water quality is poor or degraded.

~ XX   wai
      Dissolved  Oxygen
  Dissolved oxygen (DO) is a fundamental
requirement for all estuarine life. A threshold
concentration of 4 to 5 ppm (5 parts of
oxygen per million parts of water) is used
by many states to set their water quality
standards. Concentrations below approximately
2 ppm are thought to be stressful to many
estuarine organisms (Diaz and Rosenberg,
1995; U.S. EPA, 2000a). These low levels most
often occur in bottom waters and impact the
organisms that live in the sediments. Low
levels of oxygen (hypoxia) or lack of oxygen
(anoxia) often accompany the onset of severe
bacterial degradation, sometimes resulting  in
the presence of algal scums and noxious
odors. However, in  some estuaries, low levels
of oxygen, at least periodically, are part of the
natural ecology. Therefore, while it is easy to
show the conditions of the nation's estuaries
concerning oxygen concentrations, it is
difficult to interpret whether the observed
effects are the  result of natural processes or
human intervention. The DO data presented
throughout the report were collected under
the EMAP-E program unless otherwise noted.
This indicator is used to measure water quality
for an area as follows:
 Fair
  Poor
 I
 I
Less than 5% of the coastal waters
have less than 2 ppm DO.

5% to  15% of the coastal waters
have less than 2 ppm DO.

More than 15% of the coastal
waters have less than 2 ppm DO.
      Coastal Wetland Loss
  Wetlands are the vegetated interface
between aquatic and terrestrial components
of estuarine ecosystems. Wetland habitats
are  critical to the life cycles of fish, shellfish,
migratory birds, and other wildlife. These
habitats also filter and process residential,
agricultural, and industrial wastes, thereby
improving surface water quality. Wetland
habitats also buffer coastal areas against
storm and wave damage. An estimated 95%
of commercial fish and 85% of sport fish
spend a portion of their life cycles in coastal
wetland and estuarine habitats. Adult stocks
of commercially harvested shrimp, blue crabs,
oysters, and other species throughout the
United States are directly related to wetland
quality and quantity (Turner and Boesch,
1988). Wetlands throughout the United States
have been and are being rapidly destroyed
by human activities (e.g., flood control,
agriculture, waste disposal, real estate
development,  shipping, commercial fishing,
oil/gas exploration and production) and
natural processes (e.g., sea level rise, sediment
compaction, droughts, hurricanes, floods).
  Data on wetland acreage are available
for  all coastal states for the 1780s (estimated)
and 1980s (surveyed) and for the southeastern
and Gulf states for the mid-1970s to mid-
1980s. The indicator that has been used to
characterize estuarine wetland condition is
the  percentage change for the 200-year period
from 1780 to 1980 and the 10-year period
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Chapter 1
  Introduction
       from the mid-1970s to mid-1980s. The
       indicator used to measure the condition
       of coastal wetlands  is as follows:
        Good
        Fair
        Poor

         Less than 25% decline in wetland
         acreage from 1780 to 1980 and/or
         less than 5% decline from the mid-1970s
         to mid-1980s.

         Between 25% and 40% decline from
         1780 to 1980 and/or between 5% and
         10% decline from the mid-1970s to
         mid-1980s.

         Greater than 40% decline from 1780 to
         1980 and/or greater than 10% decline
         from the mid-1970s to mid-1980s.
   *§ Phytoplankton Bloom
£ •  * thrives on nutrients
 » \  Dissolved Oxygen
         trapped in
         lighter layer
                                   Dissolved Oxygen
                                    from wave action
                                   and photosynthesis
                                         Less dense
                                         freshwater
          . Dissolved Oxygen used up
          * by microorganism respiration
                               Fish will avoid
                              hypoxia if possible
               released by bottom sediments
                            Dissolved Oxygen consumed
        Shellfish
        and other
         benthic
        organisms
         unable
        to escape
         hypoxia
             Decomposition of organic
               matter in sediments
       Eutrophic Condition
  Some nutrient inputs to coastal waters are
necessary for a healthy, functioning estuarine
ecosystem. When nutrients from various sources
such as sewage and fertilizers are introduced
into an estuary, the concentration  of available
nutrients will increase beyond natural back-
ground levels, resulting in a process called
eutrophication, which may result in a host
of undesirable conditions (Figure  1-5).
  Eutrophication due to the accelerated input
of nitrogen and phosphorus can promote a
complex array of symptoms such as  excessive
growth of algae that may lead to other more
serious problems. For its National Estuarine
Eutrophication Assessment, NOAA developed
a system that evaluates several symptoms of
eutrophication in an estuary to provide a single
categorical value to represent the status of overall
eutrophic condition for each estuary (Bricker et
al.,  1999). This value is the measure of eutrophic
condition presented in this report. The primary
symptoms examined for this value are
chlorophyll a, macroalgal abundance, and
epiphyte abundance. Secondary symptoms
include loss of submerged aquatic vegetation,
harmful algae, and low dissolved oxygen. This
indicator is used to measure water quality for
an area as follows:
                                                              Good
                                                      Fair
                                                              Poor
       Figure 1-5. Eutrophication is when the concentration
       of available nutrients increases beyond normal levels.
           Less than 10% of the coastal waters have
           symptoms indicating a high potential for
           eutrophication.

           10% to 20% of the coastal waters have
           symptoms indicating a high potential for
           eutrophication.

           More than 20% of the coastal waters have
           symptoms indicating a high potential for
           eutrophication.
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                                                                                  Chapter 1
                                                                                  Introduction
      Sediment  Contaminants
  Evaluation of the potential effects
of contaminated sediments on estuarine
organisms is difficult because few applicable
state or federal regulatory criteria exist
to determine "acceptable" sediment concen-
trations of all substances. Guidelines such
as effects range low (ERL) and effects range
medium (ERM) values provide environmental
managers with benchmarks to determine if
contaminated sediments have the potential
to affect aquatic organisms adversely. The
ERM criterion is the concentration of a
contaminant that will result in ecological
effects approximately 50% of the time based
on literature studies. A more protective
indicator of contaminant concentrations is
the ERL criterion, which is the concentration
of a contaminant that will result in ecological
effects about 10% of the time. A poor rating
for  sediment quality is given to an estuary if
the ERM criteria for one or more contaminants
are  exceeded or if the ERL criteria for five or
more contaminants are exceeded. The
sediment contaminants data presented
throughout the report were collected by
the EMAP-E program unless otherwise noted.
This indicator is used to measure  water quality
for  an area as follows:
 Good
 Fair
 Poor
Less than 5% of the coastal
waters exceed one ERM criterion
or five ERL criteria.

5% to 15% of the coastal waters
exceed one ERM criterion or five
ERL criteria.

More than 15% of the coastal
waters exceed one ERM criterion
or five ERL criteria.

                                           The ERL/ERM guidelines were first developed
                                           by NOAA researchers in 1990 (Long and Morgan,
                                           1990) and further modified and improved over
                                           the next 10 years (Long et al., 1995; Long et al.,
                                           1998a; and Long et al., 1998b). However, these
                                           guidelines are still considered experimental,
                                           and several publications have questioned
                                           their reliability in assessing sediment toxicity
                                           (O'Connor et al., 1998).
                                               Benthic  Condition
  The worms, clams, and crustaceans that
inhabit the bottom substrates of estuaries are
collectively called benthic macroinvertebrates
or benthos. These organisms play a vital role
in maintaining sediment and water quality
and are an important food source for bottom-
feeding fish, shrimp, ducks, and marsh birds.
Benthos are often used as indicators of
disturbances in estuarine environments
because they are not very mobile and thus
cannot avoid environmental problems. Benthic
population and community characteristics
are sensitive indicators of contaminant and
dissolved-oxygen stress, salinity fluctuations,
and disturbance and serve as reliable indicators
of estuarine environmental quality. EMAP-E
developed a benthic index of environmental
condition for estuaries that incorporates
changes in diversity and populations of
indicator species to distinguish degraded
benthic habitats from undegraded benthic
habitats (Engle and Summers, 1999; Engle et al.,
1994; Van Dolah et al., 1999; Weisburg et al.,
1997). This index reflects changes in benthic
community diversity and the abundance of
pollution-tolerant and pollution-sensitive
species. A high benthic index rating for
benthos means that samples taken from an
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Chapter 1
Introduction
       estuary's sediments contain a wide variety of
       species, a low proportion of pollution-tolerant
       species, and a high proportion of pollution-
       sensitive species. A low benthic index rating
       indicates that the benthic communities are less
       diverse than expected, are populated by more
       than expected pollution-tolerant species, and
       contain fewer than expected pollution-
       sensitive species. The benthic condition
       data presented throughout the report were
       collected by the EMAP-E program unless
       otherwise noted. This indicator is used to
       measure regional water quality as follows:
       Good


       Fair

       Poor
     Less than 10% of the coastal
     waters have a low benthic index score.

     10% to 20% of the coastal waters
     have a low benthic index score.

     More than 20% of the coastal
     waters have a low benthic index score.
             Fish Tissue Contaminants
         Chemical contaminants may enter a marine
       organism in several ways—direct uptake from
       contaminated water, consumption of contam-
       inated sediment, or consumption of previously
       contaminated organisms. Once these contam-
       inants enter an organism, they tend to remain
       in the animal tissues and so may build up with
       subsequent feedings. When fish consume
       contaminated organisms, they may "inherit"
       the levels of contaminants in the organisms
       they consume. This same "inheritance" of
       contaminants occurs when humans consume
       fish with contaminated tissues. Contaminant
       residues are examined in target fish and
       shellfish species and are compared to Food
       and Drug Administration (FDA) criteria,
       international standards, and EPA Guidance
       Values. In this report, if more than 10% of fish
       sampled have tissue residues greater than FDA
                                               and international criteria or 20% of fish
                                               sampled have tissue residues greater than EPA
                                               Guidance Values, then the estuary is deter-
                                               mined to be in poor condition. The fish tissue
                                               contaminant data presented throughout the
                                               report were collected by the EMAP-E program
                                               unless otherwise noted. This indicator is used
                                               to measure regional water quality as follows:
                                               Good
                                                         Fair
 Poor
Less than 2% of the coastal estuaries have
significant numbers of contaminated fish
(> 10% sampled).

2% to  10% of the coastal estuaries have
significant numbers of contaminated fish
(> 10% sampled).

More than 10% of the coastal estuaries
have significant numbers of contaminated
fish (>IO% sampled).
  The FDA and international criteria have
some limitations, as these values were devel-
oped to protect the average consumer from
contaminated fish and shellfish sold in
interstate commerce. These criteria are not
intended to be protective of recreational,
tribal, ethnic, and subsistence fishers who
typically consume larger quantities of fish
than the general population and often harvest
the fish and shellfish they consume from the
same local waterbodies repeatedly over many
years. EPA has developed more stringent
screening values to protect consumers from
contaminants in noncommercial fish (e.g.,
recreational and subsistence) based on a
human health risk assessment methodology
(U.S. EPA, 2000b). This EPA methodology
is currently used by most states to identify
waterbodies where contaminant levels in
locally caught fish may pose human health
risks and is described in the following
Assessment and Advisory Data section under
State Fish Consumption Advisories.
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                                                                                 Chapter 1
                                        Introduction
Assessment and Advisory Data

  The following programs maintain databases
that are repositories for information about
how well coastal waters support their
designated or desired uses. These uses are
important factors in public perception of
the condition of the coast and also say a lot
about the condition of the coast as it relates
to public health.

Clean Water Act Section 305(b)
and 303(d)  Assessments
  States report water quality assessment
information and water quality impairments
under Sections 305(b) and 303(d) of the Clean
Water Act. States and tribes rate water quality
by comparing data to their state and tribal
water quality standards. Water quality
standards include narrative and numeric
criteria that support specific designated uses
and also specify goals to prevent degradation
of good quality waters. States and tribes use
their numeric criteria to evaluate whether the
designated uses assigned to waterbodies are
supported. The states then consolidate their
more detailed uses into general categories so
that EPA can present a summary of state and
tribal data. The most common designated
uses are
• Aquatic life support
• Drinking water supply
• Recreation, such as swimming, fishing,
  and boating
• Fish  consumption.
  After comparing water quality data to the
criteria set by water quality standards, states
and tribes classify their waters into the
following categories:
  Fully
  Supporting

These waters meet applicable water quality
 standards, both criteria and designated use.
             These waters currently meet water
  Threatened   quality standards, but states are concerned
             they may degrade in the near future.
  Partially    I These waters meet water quality
  Supporting  I standards most of the time, but exhibit
            I occasional exceedances.
  Not       I These waters do not meet water
  Supporting   quality standards.

  Waters classified as partially supporting
or not supporting their uses are categorized
as impaired. Section 303(d) of the Clean Water
Act requires states to submit a list of these
impaired waters. These waters are targeted
for Total Maximum Daily Load (TMDL)
development. A TMDL is a calculation of
the maximum amount of a pollutant that
a waterbody can receive  and still meet water
quality standards and an allocation of that
amount to the pollutant's sources. A TMDL
is the sum of the allowable loads of a single
pollutant from all contributing point and
nonpoint sources. The calculation must
include a margin of safety to ensure that the
waterbody can be used for the purposes the
state has designated.

  The 305(b) assessment data reported by the
states are stored in EPA's National Assessment
Database (U.S. EPA, 2000d). Impaired waters
are reported on state 303(d) lists, and the data
are stored in EPA's TMDL Tracking System.
These data are useful for analyzing whether
or not efforts to improve water quality within
a state are successful. Unfortunately, each state
monitors water quality parameters differently,
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Chapter 1
Introduction
       so it is difficult to make generalized statements
       about the condition of the nation's coasts
       based on these data alone.

       State  Fish Consumption Advisories
          The 50 states, U.S. territories, and Native
       American tribes (hereafter referred to as
       states) have primary responsibility for
       protecting their residents from the health risks
       of consuming contaminated noncommercially
       caught fish and shellfish.  (Sale of commercial
       fish in interstate commerce is regulated by the
       FDA.) States do this by issuing consumption
       advisories for the general population,
       including recreational and subsistence fishers,
       as well  as for sensitive subpopulations (such
       as pregnant women, nursing mothers, and
       children). These advisories inform the public
       that high concentrations of chemical contam-
       inants (such as mercury and polychlorinated
       biphenyls or PCBs) have been found in local
       fish and shellfish. The advisories include
       recommendations to limit or avoid consump-
       tion of certain fish  and shellfish species from
       specific waterbodies or, in some cases, from
       specific waterbody  types within a state
       (e.g., all coastal waters).
          The 2000 National Listing of Fish and
       Wildlife Advisories (NLFWA) is a database—
       available from EPA—that can be searched on
       the Internet at http://www.epa.gov/ost/fish.
       This database contains fish advisory
       information provided to EPA by the states.
       The NLFWA database can generate national,
       regional, and state maps that illustrate any
       combination of advisory  parameters.
                                                   Classified  Shellfish-Growing Waters
                                                     NOAA's National Shellfish Register is
                                                   published to summarize the status of the
                                                   shellfish-growing waters around the country
                                                   (Table 1-2 defines the classifications). Seven
                                                   Registers have been published since  1966.
                                                   The 1995 Register characterizes over 4,200
                                                   shellfish-growing waters in 21 coastal states,
                                                   reflecting an assessment of nearly 25 million
                                                   acres of estuarine and nonestuarine waters.
                                                   Over 77 million pounds (meat weight) was
                                                   harvested from these waters in 1995, with
                                                   a dockside value of $200 million. The 1995
                                                   Register data are available on the Internet
                                                   at http://sposerver.nos.noaa.gov/projects/
                                                   95register. The 1995 Register will be the
                                                   last published version. NOAA is currently
                                                   investing their efforts into making state
                                                   shellfish advisory data available on-line.
                                                   Table 1-2. Classifications for Shellfish-Growing Waters
                                                   Approved
                                                   Waters
Shellfish may be harvested for direct marketing.
Fecal coliform median or geometric mean most
probable number (MPN) does not exceed 14
per 100 ml, and not more than 10% of samples
exceed MPN of 43 per 100 ml for 5-tube
decimal dilution test.
                                                   Conditionally    Growing waters meet approved classification
                                                   Approved      standards under predictable conditions. Open to
                                                   Waters        harvest when water quality standards are met,
                                                                but closed at other times. Fecal coliform
                                                                standards are the same as for Approved.
                                                   Restricted      Shellfish may be harvested only if they are relayed
                                                   Waters        or depurated before direct marketing. Fecal coli-
                                                                form median or geometric mean MPN does not
                                                                exceed 88 per  100 ml, and not more than 10%
                                                                of the  samples  exceed MPN of 260 per 100 ml.
                                                   Conditionally    Growing waters do not meet the criteria for
                                                   Restricted      restricted waters, but may be harvested if shellfish
                                                   Waters        are subjected to a suitable purification process.
                                                                Fecal coliform standards same as for Restricted.
                                                   Prohibited
                                                   Waters
Shellfish may not be harvested for marketing
under any conditions.
                                                              Unclassified    Waters that are part of a state's shellfish program
                                                              Waters       but are inactive, and the state does not conduct
                                                                        I  any water quality monitoring or maintain a
                                                                        I  sanitary survey.
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                                                                                Chapter 1
                                         Introduction
      Total Maximum Daily Load
           (TMDL) Program

You can view maps of the nation's 303(d) listed
waters and associated impairments at EPA's Total
Maximum Daily Load website. You can view local
information and download geographic informa-
tion system (GIS) and database files from this
site as well:
       http://www.epo.gov/owow/tmd/

         The NLFWA database
        includes information  on

• Geographic location of each advisory
• Species and size ranges of fish and  shellfish
  included in each advisory
• Chemical contaminants identified
  in the advisory
• Geographic extent of advisories in estuaries
  (square mileage) and coastal areas  (miles)
• Population for whom the advisory was issued
  (general population or subpopulations).
         http://www.epo.gov/ost/flsh

     EPA's BEACH Watch Website

EPA has created a new website called "BEACH
Watch" to serve as an online directory of
information about the water quality at beaches
nationwide and about local protection programs.
The website address is

       http://www.epo.gov/ost/beoches
Beach Closures
  There is growing concern in the United
States about public health risks posed by
polluted bathing beaches. Scientific evidence
documenting the rise of infectious diseases
caused by microbial organisms in recreational
waters continues to grow. However, there is
not enough information currently available
to define the extent of beach pollution
throughout the country. A primary goal of
EPA's Beaches Environmental Assessment,
Closure, and Health (BEACH) Program,
established in 1997, is to work with state,
tribal, and local governments to compile
information on beach pollution to define
the national extent of the problem.
  A few states have comprehensive beach
monitoring programs to test the safety of
water for swimming. Many other states have
only limited beach monitoring programs, and
some states have no monitoring programs
linked directly to water  safety at swimming
beaches. What we do know is that beach
pollution is a persistent problem, based on the
number of beach closings and swimming
advisories that continue to be issued annually.
In 1999, there were over 1,830 beach closures
and advisories in coastal and Great Lakes
waters. This represents a substantial increase
over previous years, although changes in the
number of closures may result from improved
monitoring and reporting activities.
                                   Photo:®  John Theilgard


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Chapter 1
Introduction
       Purpose of This Report

         The purpose of this report is to present
       a broad baseline picture of the condition of
       estuaries across the United States and, where
       available, snapshots of the condition of
       offshore waters. This report uses currently
       available data sets to discuss the condition
       of the nation's coasts. This report is not
       intended to be a comprehensive literature
       review of coastal  information. The data sets
       presented in this  report can begin to tell a
       story about coastal condition. For example,
       EMAP has monitoring data on a variety of
       indicators for the Virginian, Louisianian, and
       Carolinian provinces, which make up 70% of
       U.S. estuarine acreage. This report will serve as
       a useful benchmark for analyzing the progress
       of coastal programs in the future and will be
       followed in subsequent years by reports for
       more specialized  coastal issues. It will also
       serve as a reminder of the data gaps and other
       pitfalls that we are constantly faced with and
       must try to overcome in the future in order
       to make more reliable assessments  of how the
       condition of our  nation's  coastal resources
       may be changing with time.
         This report also highlights several
       exemplary programs at the federal, state,
       tribal, and  local levels that show coastal
       conditions at various regional scales.
       These highlights are not intended to be
       comprehensive or exhaustive of all coastal
       programs,  but are presented to show that
       information about the health of coastal
       systems is being collected for decision-
       making at  these local and regional levels.
                                                     NOAA's State of the Coast Report
                                                      Assessing the Health of the Nation's
                                                               Coastal Resources

                                                     NOAA's State of the Coast Report is an
                                                   account of the status of the environmental
                                                   condition for the nation's coastal areas and
                                                   resources. The report consists of a series of
                                                   essays on important coastal issues ranging from
                                                   population growth  to the extent and condition
                                                   of U.S. coral reefs to efforts to  reduce the
                                                   impacts of coastal hazards. The  essays present
                                                   information from the national, regional, and
                                                   local perspectives.  Each essay also includes
                                                   the responses and  opinions of an expert panel
                                                   on two key questions relevant to the issue.
                                                   Essays are currently available for 16 topics.

                                                           http://stote-of-coost.nooo.gov
                                                            The Heinz Center
                                                      Designing a Report on the State
                                                         of the Nation's Ecosystems
                                                     Selected Measurements for Croplands,
                                                         Forests, and Coasts & Oceans

                                                     The Heinz Center Report on the State
                                                   of the Nation's Ecosystems, funded by USDA,
                                                   DOI, Departments of Defense and  Energy,
                                                   EPA, the National Aeronautics and Space
                                                   Administration, NOAA, and the National Science
                                                   Foundation, presents a framework for reporting
                                                   ecological condition and applies this framework
                                                   to coasts and oceans. The purpose of the report
                                                   is to identify and present a suite of measures that
                                                   can be used to gauge the condition and use of
                                                   the nation's natural resources. One of the major
                                                   findings of the report is that national data are
                                                   available for only about one-third of the
                                                   measures of condition for coasts and  oceans.

                                                          http:llwww. os-ecosystems. org
      National Coastal Condition Report

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                                                                             Chapter 1
                                                                    Introduction
Federal Programs and Initiatives  That Address
Coastal Issues
          Restoring &
         I^otectmg
             ' Water*
CI.KAN WATER
ACTION PLAN
CWAP: Coastal
Research and
Monitoring Strategy
http:llwww.cleanwater.
gov
The National Coastal Research and
Monitoring Strategy was developed to
address the lack of nationally consistent data
for analyzing the status and trends of coastal
conditions. The objectives of the strategy
are to

• Document the status and trends in
  environmental conditions at scales
  necessary for scientific investigation and
  policy development
• Evaluate the causes and consequences of
  changes in environmental status and trends
• Assess environmental, economic, and
  sociological impacts  of alternative policies
  for dealing with these changes
• Implement programs and policies to correct
  observed environmental problems.

  The key attributes of the proposed Coastal
Research and Monitoring Strategy include co-
funding by federal and state programs; nested
designs that allow state-specific issues to be
addressed in a national context; and attention
to specific  state issues, collective reporting,
and cross-system comparisons.
Figure 1-6. Twenty-four
states and Puerto Rico are
participating in Coastal 2000,
              National Coastal
              Assessment -
              Coastal 2000
              http:llwww. ep a.gov/
              emfiultelnca

  EPA's National Coastal Assessment (also
known as Coastal 2000 or C2000) is a 5-year
effort led by EPA's Office of Research and
Development to evaluate the assessment
methods it has developed to advance the
science of ecosystem condition monitoring.
This program will survey the condition of
the nation's coastal resources (estuaries and
offshore waters) by creating an integrated,
comprehensive coastal monitoring program
among the coastal states to assess the coastal
ecological condition.
  The strategy for Coastal 2000 focuses on
a strategic partnership with NOAA, USGS,
and all 24 U.S. coastal states. Using a compat-
ible, probabilistic design and a common set
of survey indicators, each state will conduct
the survey and assess the condition of its
coastal resources independently, yet these
estimates can be aggregated to assess condi-
tions at EPA Regional, biogeographical, and
national levels. The map in Figure 1-6 shows
the states (and Puerto Rico) that are included
in the survey, the intended number of
sampling sites in each state for 2000-01,
and the stage of development of the survey.
I
                                                              Alaska
                                                         Hawaii
                                                       Number of Sample Sites
                                                          0  50-100
                                                          a  101-200
                                                          D 201-500
                                Puerto Rico
                                           Participation
                                             n Present and Continuing Participation
                                             • Intended Participation in 2000-01
                                             D Intended Participation in 2001
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Chapter 1
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         The Environmental Monitoring and
       Assessment Program (EMAP) conducts
       annual surveys to measure indicators of
       the health of plants and animals, the quality
       of their surroundings, and the presence
       of pollutants. The program, at present, is
       developing the appropriate designs and sets
       of indicator measurements to characterize
       the condition of the nation's resources. Once
       these developmental issues are addressed, the
       goal of the program is long-term monitoring
       activity that will provide information on the
       overall health of the environment and the
       effectiveness of pollution prevention and
       control measures.
         EMAP-Estuaries  (EMAP-E), implemented
       through partnerships between EPA, NOAA,
       U.S. Geological Survey (USGS), coastal states,
       and academia, will provide information on the
       ecological condition of the nation's estuaries
       as part of this larger program. Ecological
       health is being  assessed by investigating the
       regional distributions of fish and bottom-
                                        Environmental Monitoring
                                        and Assessment Program
                                        http:Hwww. epo.gov/emop

                                              dwelling organisms. EMAP-E is determining
                                              what portions of estuaries can support these
                                              plants and animals and finding out why
                                              certain areas do not support them.
                                                The EMAP-E approach places all coastal
                                              waters, bays, and estuaries into defined areas
                                              for study (Figure 1-7). From 1990 to 1993,
                                              EMAP-E investigated the ecological condition
                                              of the estuaries of the Middle Atlantic states
                                              from Cape Cod, Massachusetts, to Cape
                                              Henry, Virginia (Virginian Province), and
                                              the estuaries of the Gulf of Mexico from
                                              Anclote Anchorage, Florida, to the Rio
                                              Grande, Texas (Louisianian Province).
                                              EMAP-E conducted provincewide monitoring
                                              in the Carolinian province from 1994 to 1995.
                                              The  estuarine resources in these three
                                              provinces represent 70% of the estuarine
                                              acreage of the United States. EMAP-E also
                                              conducted monitoring of North Carolina's
                                              estuaries from 1994 to 1997 and site-specific
                                              sampling of the Neuse River during 1998
                                              and  1999.
                 Columbian
                Californian
                                                                                Acadian
                                                                            Virginian
                                                                          Carolinian
                                                                         West Indian
               Figure 1-7. EMAP-Estuaries study areas.
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                                                                                Chapter 1
                                        Introduction
                                                                                                     I
Coastal Zone Management Program
http://www.ocrm.nos.nooo.gov/czm

  The Coastal Zone Management (CZM)
Act of 1972 established a voluntary
partnership between federal and state
governments for management of the coast.
The program provides funding through
NOAA to coastal states (including the Great
Lakes states) and territories (see Figure 1-8)
for  the development and implementation
of measures to conserve and develop coastal
resources (NRG, 1997). The CZM program
focuses on efforts to protect the nation's
coastal zones, assists states in their responsi-
bilities for coastal zone management,
develops special area management plans,
and encourages the participation and
coordination of all public and private
stakeholders who affect the coastal zone.
States have the flexibility to address their
most pressing coastal issues, and many states
have supported the revitalization of urban
waterfronts and the reuse of waterfront sites
impaired by contamination. States develop
and implement coastal zone management
programs with enforceable policies designed
to meet national objectives (NRG, 2000).
Over 99.7%, or 95,093 miles, of U.S. shoreline
is managed by federally approved state coastal
zone management programs (NRG, 2000).
                   D U.S. Virgin Islands
                   I Puerto Rico
                   I American Samoa

Figure 1-8.  Coastal Zone Management Program.
    State/Territorial CZM
    Programs
    EH 33 Approved
    CH I in Development
    d I Inactive
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Chapter 1
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       NATIONAL MARINE
          SANCTUARIES  .
                  National Marine Sanctuary System
                  http://www.sonctuories.nos.nooo.gov
         The National Marine Sanctuary (NMS)
       System, a network of 13 marine protected
       areas, was established in 1972 in response to
       public concern over ocean pollution and its
       impact on marine mammals and ecosystems
       (Figure 1-9).
         National marine sanctuaries embrace part
       of our collective riches as a nation. Within
       their protected waters, giant humpback whales
       breed and calve their young, coral colonies
       flourish, and shipwrecks tell the story of
       our maritime history. The Sanctuary System
       is today administered under the National
       Ocean Service of the National Oceanic
       and Atmospheric Administration. The
       objectives of the NMS System program are to

       • Identify and designate areas of special
         national significance as sanctuaries
                                               • Develop and implement coordinated
                                                 protection and managements plans
                                                 for sanctuaries
                                               • Facilitate public and private uses insofar
                                                 as they are compatible with resource
                                                 protection
                                               • Support scientific research and public
                                                 education in sanctuaries (NRC, 1997).
                                                 The system's objectives work to conserve,
                                               protect, and enhance the biodiversity,
                                               ecological integrity, and cultural legacy of our
                                               nation's oceans and Great Lakes. Marine
                                               sanctuaries contain natural classrooms for
                                               students and scientists, cherished recreational
                                               spots, and valuable cultural artifacts. National
                                               Marine Sanctuaries are committed to protect-
                                               ing American's ocean treasures for this and
                                               future generations.
                     Olympic
                       Coast
                   Gulf of^
                 Farallones'
                        /
                 Monterey Bay^

                    Channel Islands
                                                                               Stellwagen
                                                                   Thunder Bay      Bank
                                              Designated
                                                                                 Gray's Reef
                                                              Flower Garden
                                                              Banks
                                                                     Florida Keys
                 Figure 1-9.  National Marine Sanctuaries.
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                                                                                    Chapter 1
                                                                           Introduction
                                                                                                           I
 ESTUARY
 iPROGRAMl
National Estuary Program
http://www.epo.gOv/ov/ov//estuor/es
  The National Estuary Program (NEP) was
established under Sections 317 and 320 of
the Water Quality Act of 1987 (amendments
to the Clean Water Act) to:

• Identify potentially significant estuaries
  that are threatened by pollution,
  development, or overuse
• Promote comprehensive planning for,
  and conservation and management of,
  nationally significant estuaries
• Encourage the preparation of management
  plans for estuaries of national significance
  and enhance the coordination of estuarine
  research
• Create a monitoring program to evaluate
  the management plan's effectiveness.
  The mission of the NEP is to protect
and restore the health of estuaries while
          Puget Sound

     Lower Columbia
        Estuai

     Tillamook Bay
    San Francisco
      Estuary

       Morro Bay

     Santa Monica Bay"
                                 supporting economic and recreational
                                 activities. To achieve this, EPA designates
                                 local NEPs to develop partnerships among
                                 the government agencies that oversee
                                 estuarine resources and the people who
                                 depend on these resources for their livelihood
                                 and quality of life. Each NEP brings together
                                 officials at the federal, state, and local levels;
                                 interest group representatives; the scientific
                                 and academic communities; and private
                                 citizens to work together as a management
                                 conference to develop a Comprehensive
                                 Conservation and Management Plan (CCMP).
                                 Twenty-eight estuary programs are currently
                                 working to safeguard the health of some of
                                 our nation's most important coastal waters
                                 (Figure 1-10).
                                             Year Entered the Program
                                            • 1987       • 1990
                                            D 1988       • 1993
                                                  • 1995
                                                          Casco Bay
                                                            Massachusetts Bay
                                                             Buzzards Bay
                                                             arragansett Bay
                                                            Peconic Bay
                                                          Long Island Sound
                                                        New York/New Jersey Harbor
                                                        Barnegat Bay
                                                       Delaware Inland Bays
                                                       Delaware Estuary
                                                       Maryland Coastal Bays
                                                      Albemarle-Pamlico
                                                      Sounds
                          o
                                        Coastal Bend Bays
                                           & Estuaries
                                     Mobile Bay
                                     Tampa Bay'
                                     Sarasota Bay'
                                    Charlotte Harbor
                                                       VI
    Figure I-10. Locations of the 28
    National Estuary Program estuaries.
                            Barataria-Terrebonne
                            Estuarine Complex
                                                                  San Juan Bay
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Chapter 1
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                         NOAA's National Estuarine Research Reserve System
                         http:Hinlet.geoLsc.edulcdmohome.html
         The National Estuarine Research Reserve
       System (NERRS) is a network of protected
       areas established to develop and provide
       information that promotes informed resource
       management (Figure 1-11). The reserve system
       was created by the Coastal Zone Management
       Act of 1972. Currently, there are 25 reserves
       in the system representing the wide range of
       estuarine and coastal habitats found in the
       United States.
         The reserves implement a System-Wide
       Monitoring Program (SWMP) to detect
       physical and biological change in estuaries.
       The SWMP provides critical information on
       national  estuarine trends and allows flexibility
       to assess  coastal issues of regional or local
       concern. The SWMP makes onsite research
                                                easier and promotes use of the reserves as
                                                demonstration sites for new approaches to
                                                estuarine management. The  SWMP provides
                                                valuable long-term data and information
                                                to researchers, natural resource program
                                                managers, and other coastal  decision makers.
                                                   The SWMP is an integrated monitoring
                                                program that consists of three components
                                                (phased in over several years):

                                                •  Estuarine water quality monitoring
                                                •  Biodiversity monitoring
                                                •  Land use and habitat change analysis.

                                                   Further details on SWMP and preliminary
                                                results are presented in a highlight on page 37
                                                in Chapter 2.
                   Padilla Bay
                                                                              Wells
              South Slough


            San Francisco Ba
             Elkhorn Slough
                  Tijuana River
                           Kachemak Bay
                                                      St. Lawrence River
                                                                    Wolk
                                                                        Great Bay

                                                                        .Waquoit Bay
                                                                        Narragansett Bay
                                                                       Hudson River
                                                                       Jacques Cousteau
                                                                      (Mullica River and Great Bay)
                                                                     Delaware
                                                                    Chesapeake Bay, MD
                                                                   Chesapeake Bay, VA
                                                                  North Carolina
                                                                 North Inlet - Winyah Bay
                                                               ACE Basin
                                                                Sapelo Island
                                                                 Guana Tolomato Matanzas
                                                 Apalachicola Bay  Rookery Bay
          Figure I-I I. Locations of the 25 NERRS sites (NOAA).
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                                                                               Chapter 1
                                       Introduction
                                                                                                    I
                     NOAA's National Status and Trends (NS&T) Program
                     http:llccmaserver.nos.noaa.govlNSandTINew_NSandT.html
  In 1984, NOAA initiated the National Status
and Trends (NS&T) Program to determine
the current status of, and to detect changes
in, the environmental quality of our nation's
estuarine and coastal waters. NS&T sites are
identified in Figure 1-12. The NS&T

• Conducts long-term monitoring of contam-
  inants and other environmental conditions
  at more than 350 sites along the U.S. coast
• Studies biotic effects intensively at more
  than 25 coastal ecosystems
• Partners with other agencies in a variety
  of environmental activities
• Advises and participates in local, regional,
  national, and international projects related
  to coastal monitoring and assessment.
  The NS&T Program comprises several
projects: the Mussel Watch Project, the
Quality Assurance Project, the Specimen
Banking Project, Sediment Toxicity Surveys,
Biomarkers, Environmental Indices, and
Regional Assessment. Information from
the NS&T Program is synthesized and
reported to those responsible for managing
coastal natural resources and to the public.
                                                               Bioeffects Survey
                                                             • Mussel Watch
                                        Puerto Rico
       Figure 1-12. NOAA NS&T sites.
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Chapter 1
   Introduction
                             NOAA's National Marine Fisheries Service National
                             Habitat Program
                             http://www.nmfs.nooo.gov/hob/tot/index.htm/
  The Office of Habitat Conservation,
within NOAA's National Marine Fisheries
Service (NMFS), together with the five
NMFS Regions make up the National Habitat
Program. The Program works to manage,
conserve, restore, and enhance habitats
for fishery resources and protected marine
species. Through research and management,
the National Habitat Program's primary
mandates focus on ensuring that living
marine resources have sufficient healthy
habitat to sustain populations of fish and
shellfish. Those mandates emphasize
wetlands, anadromous fish habitat, and
habitat of managed fish species and  invariably
include close partnerships with state and
federal agencies, industry, environmental
groups, and academia (Figure 1-13).
  Since the enactment of the Sustainable
Fisheries Act of 1996, the Program has worked
with regional fishery management councils in
                                                          identifying habitats essential to the long-
                                                          term sustainability of the nation's fishery
                                                          resources.  The identification of this essential
                                                          fish habitat (EFH) supports the conservation
                                                          and enhancement of habitat through coordi-
                                                          nation and consultation with other federal
                                                          and state agencies that undertake activities
                                                          affecting EFH. The Program is working to
                                                          stem the tide of wetland loss in Louisiana,
                                                          which is beset by the highest rate of coastal
                                                          wetland loss in the nation. Through its
                                                          mandated  role in the Coastal Wetlands
                                                          Planning, Protection, and Restoration Act
                                                          (CWPPRA), the NMFS works to develop
                                                          and implement habitat projects to restore salt
                                                          marshes lost to erosion, subsidence, and hydro-
                                                          logical alterations. The Program also seeks to
                                                          restore, replace, or acquire the equivalent of
                                                          resources injured as  a result of discharges of
                                                          oil or hazardous substances or other human-
                                                          induced environmental disturbances.
                      Northw
                     California
             Western
              Pacific
                  o
                        In Partnership with
                        Fish America Foundation
                        National Fish and Wildlife Foundation
                        EPA Five Star
                        Restore America's Estuaries
                        National Fisheries Institute
                        NOAA

              Figure 1-13. National Habitat Program.

      National Coastal Condition Report
                                                                                       New England
                                                                                   "lid-Atlantic
outh Atlantic

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                                                                                Chapter 1
                                        Introduction
                Office of
                  Air Quality Planning
                    ana Standards
EPA's Great Waters Program
http://www.epa.gov/oar/oaqps/gr8vyater
                                                   I
  On November 15,1990, in response
to mounting evidence that air pollution
contributes to water pollution, Congress
amended the  Clean Air Act and included
provisions that established research and
reporting requirements that related to the
deposition of hazardous air pollutants to the
"Great Waters." The waterbodies designated
by these provisions are the Great Lakes, Lake
Champlain, Chesapeake Bay, and certain other
coastal waters (identified by their designation
as NEP or NERRS sites, Figure 1-14). The
amendments  require EPA to establish
deposition monitoring networks in the Great
Waters, as well as conduct additional studies,
such as assessing sources and deposition rates,
evaluating adverse affects, and researching
monitoring methods and biotic sampling. The
amendment also requires EPA to report its
findings to Congress in periodic reports. These
reports to Congress address three main issues:
• Contribution of atmospheric  deposition
  to total pollutant loading to the Great
  Waters
• Adverse effects on human health
  and the environments
• Sources of the pollutants.
The third report to Congress was completed
in June 2000.
                                                                                 Chesapeake
                                                                              Lake
                                                                 Lake Huron   Champlain
                                                                        Lake
                                                                       Ontario
                              Great Waters Designated by Name
                           • EPA National Estuary Program (NEP) Sites
                           • NOAA NERRS Designated Sites
                           Q Existing EPA and NOAA NERRS Designated Sites
                           D Existing EPA and NOAA NERRS Proposed Sites
     Figure 1-14. EPA's "Great Waters" as designated by the Clean Air Act.
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Chapter 1
Introduction
            USGS
                      National Streamgaging Program
                      http:llwater. usgs.gov/os w
         The U.S. Geological Survey (USGS)
       National Streamgaging Program provides
       freshwater inflow data for estuary subsystems
       across the nation. Freshwater inflow, a major
       determinant of the physical, chemical, and
       biological characteristics of most estuaries, is
       measured by USGS river gauges. Freshwater
       inflow affects the concentration and retention
       of pollutants, the distribution of salinity, and
       the stratification of fresh and salt water within
       an estuary. These characteristics help define
       the ecological processes and habitats within an
       estuary and determine how human activities
       affect an estuary's overall condition.
         The National Stream Water Quality
       Accounting Network (NASQAN, Figure 1-15)
       collects water chemistry and sediment data
       along the nation's largest streams that can
       be used to characterize large subbasins of
       these rivers and identify regional sources for
       the contaminants and sediments carried by
       the stream. NASQAN stations are sampled
       frequently enough to characterize variations
                                              in chemical and sediment concentrations that
                                              occur during a year, particularly the variation
                                              that occurs between low and high flows,
                                              during different seasons of a year, and during
                                              different hydrologic regimes such as periods
                                              when snowmelt dominates river discharge.
                                              By sampling a river under these different
                                              conditions, the amount of material that
                                              passes a station, known as the mass flux
                                              of a constituent (expressed as  tons per day),
                                              can be reliably determined by multiplying
                                              the concentration of a constituent by the
                                              stream discharge.
                                                Constituent mass fluxes can be compared
                                              among stations and across spatial scales. For
                                              example, yields of contaminants (expressed
                                              as tons per square mile) can be compared
                                              between stations; gains or losses in a river
                                              reach can be determined between any two
                                              stations; and amounts of materials delivered
                                              to a reservoir or estuary can be calculated.
                                              The ability to determine these three values—
                                              source, transport, and delivery of constit-
                                              uents—enables a broad range of scientific and
                                              policy issues to be addressed.
             Figure 1-15. USGS
             NASQAN active station
             locations.
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                                                                                 Chapter 1
                                                                                             Introduction
     U.S.
FISH & WILDLIFE
   SERVICE
                  U.S. Fish and Wildlife Service Coastal Program
                  http://www.fws.gov/cep/coostv/eb.htm/
                                                                                                         I
  The U.S. Fish and Wildlife Service Coastal
Program works with partners to conserve
coastal habitats for the benefit of fish, wildlife,
and people. Coastal Program biologists
provide technical and financial assistance
to a wide variety of partners, including other
federal agencies, state and local governments,
conservation organizations, local land trusts
and watershed councils, businesses, and
private landowners. The program forms
cooperative partnerships that

• Restore coastal wetlands, uplands,
  and riparian areas
• Protect coastal habitats through voluntary
  conservation easements and fee-title
  acquisition from willing sellers
• Remove or retrofit barriers to fish passage
  in coastal watersheds
• Control exotic  invasive species that threaten
  estuarine health. Program funds are more
      Region 7
             \
              Alaska
                                                    than tripled through leveraging with
                                                    partners, and the focus is achieving
                                                    on-the-ground results.
                                                    From 1994 to 1999, Coastal Program
                                                  partnerships restored more than 46,550
                                                  acres of coastal wetlands, 17,130 acres of
                                                  coastal uplands, and 320 miles of riparian
                                                  habitat; protected more than 166,000 acres
                                                  of coastal habitat through conservation
                                                  easements and acquisition; and reopened
                                                  2,260 miles of coastal streams for access
                                                  by anadromous fish.
                                                    In FY2000, the Fish and Wildlife
                                                  Service's Coastal Program funded activities
                                                  in 14 coastal watersheds  around the country:
                                                  Puget Sound, San Francisco Bay, San Diego
                                                  Bay, Galveston Bay, South Florida, South
                                                  Carolina, Albemarle/Pamlico Sound,
                                                  Chesapeake Bay, Delaware Bay, New York
                                                  Bight, the Gulf of Maine, the Great Lakes,
                                                  Alaska, and the Pacific Islands (Figure 1-16).
                                                                               Gulf of Maine
                                                                               i
                                                                              S. New England/
                                                                                NY Bight
                                                                           Delaware Bay
                                                                          Chesapeake Bay

                                                                          Albemarle/Pamlico
                                                                              Sound
    Pacific Islands
    Figure 1-16.  Location of Fish and Wildlife Service Coastal Program activities.
                                                                        South Carolina
                                                                           Coast

                                                                         Everglades/
                                                                         South Florida
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Chapter 1
Introduction
              U.S.
        FISH & WILDLIFE
            SERVICE
                   U.S. Fish and
                   Wildlife Service
                   National Wetlands
                   Inventory
                   http:llwetlands.
                   fws.gov
         The National Wetlands Inventory (NWI)
       of the U.S. Fish and Wildlife Service produces
       information on the characteristics, extent, and
       status of the nation's wetlands and deep water
       habitats. This information is used by federal,
       state, and local agencies, academic institutions,
       U.S. Congress, and the private sector. The
       Emergency Wetland Resources Act of 1986
       directs the Service to map  the wetlands of
       the United States. The NWI has mapped 89%
       of the lower 48 states and 31% of Alaska.
       The Act also requires the Service to produce
       a digital wetland database  for the United
       States. About 39% of the lower 48 states'
       wetlands and 11% of Alaska's wetlands are
       digitized. Congressional mandates require
       the NWI to produce status and trends reports
       to Congress at 10-year intervals. In 1982, the
       NWI produced the first comprehensive and
       statistically valid estimate of the status of the
       nation's wetlands and wetland losses and in
       1990 produced the first update. Future
       national updates are scheduled for 2000,
       2010, and 2020. In addition to the status and
       trends reports, the NWI has produced over
       130 publications, including manuals, plant and
       hydric soils lists, field guides, posters, wall-size
       resource maps, atlases, and state reports and
       has had numerous articles published in
       professional journals.
                       EPA's BEACH
                       Watch Program
                       http'.llwww. epa.
                       govlostlbeaches
  EPA's BEACH Program was established in
1997 to strengthen U.S. beach water protection
programs and water quality standards, better
inform the public, and promote scientific
research to further protect the health of
beachgoers. The BEACH Program is designed
to encourage government agencies at the
federal, state, tribal, and local level to
strengthen beach water quality standards and
testing methods, use predictive water pollution
models  to better inform the public about
beach water  quality conditions, and make
information about the risks associated with
swimming in contaminated beach water
available to the public. Under the BEACH
Program, EPA will improve laboratory test
methods for detecting contaminants in beach
water; invest additional resources in beach
water quality health  and testing methods
research; and help state, local, and tribal
government agencies adopt and carry out
effective water quality monitoring programs.
  The Beaches Environmental Assessment and
Coastal Health Act (BEACH Act) was passed
in 2000 and  amended the CWA to require that
states with recreational beaches adopt new or
revised water quality standards for pathogens
and pathogen indicators. The BEACH Act
amendment also authorizes EPA to award
grants to states to help them develop and
implement beach monitoring and public
notification programs for pathogens. If a
state does not have a monitoring program
that meets EPA criteria, the BEACH Act
requires EPA to perform the monitoring and
notification  activities in that state's coastal
recreational waters.
      National Coastal Condition Report

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Chapter
         National
         Coastal
         Condition



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Chapter 2
            National  Coastal
            Condition
               Overall, the condition of    ti
                estuaries in the United States (Atlantic, Pacific,
                  Gulf of Mexico, and the Great Lakes, excluding
                  Alaska and Hawaii) is fair, with four of the seven
                  indicators receiving a "poor" rating, one receiving
                 a "fair" rating, and two with a "good" rating.
               Figure 2-1 summarizes U.S. estuarine conditions.
          Water clarity is good in western and northeastern estuaries
and the Great Lakes but fair in Gulf of Mexico and southeastern
estuaries. Dissolved oxygen conditions are generally good throughout
the estuaries of the United States. Eutrophic condition, sediment
contaminant conditions, and benthic
community conditions are generally
poor throughout U.S. estuaries.
Condition as measured by fish tissue
contaminant concentrations is poor in
northeastern, Gulf of Mexico estuaries
and in the Great Lakes. The fish tissue
contaminants indicator is good
in southeastern estuaries and fair
in western estuaries.
  More specifically, about 56%
of assessed estuarine area is in good
condition for supporting plants,
animals, and human uses (Figure 2-2).
About 34% of the area of the nation's
estuarine resources have poor
conditions for aquatic life while 33%
u         4. ui  i   i  r   u           BEACH Watch volunteers document the live and dead
have unacceptable levels for human-          ,.,  ,, ., ,.,  c  ..   c
                                  animals of the Gulf of the harallones Sanctuary
related uses based on the available       (Photo: Gulf of the Farallones NMS).
                                                            E  •
                                                              T.
 National Coastal Condition Report

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                                                                         Chapter 2   National Coastal Condition

  Overall National
   oastal Condition
      Water Clarity
      Dissolved Oxygen

 * No indicator data available.
** Does not include the hypoxic zone in offshore Gulf of Mexico waters.
 Figure 2-1.  Overall national coastal condition.
indicators. Most of the aquatic life
in poor condition are benthic communities
(bottom-dwelling organisms). Aquatic life
is categorized as poor based on measures
of biodiversity, increased abundances of
pollution-tolerant species, and decreased
abundances of pollution-sensitive species.
These impaired communities occur in areas
exhibiting low dissolved oxygen, eutrophic
conditions, sediment contamination, and
habitat degradation.
    Unimpaired
       56%
          Fair
                Poor
                         Impaired Human and
                          Aquatic Life Use
                               23%
Impaired Aquatic
   Life Use
     11%
                          Impaired Human Use
                                10%
Figure 2-2. National estuarine condition (U.S. EPA/EMAP).
                                                                         National Coastal Condition Report

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Chapter 2   National Coastal Condition
       Coastal Monitoring Data
       Note: The data presented in this section exclude
       the Great Lakes because of sampling design
       differences in the data sets. No areal estimates
       for the Great Lakes can be determined. The
       Great Lakes data are presented in Chapter 7.
             Water  Clarity
         The overall water clarity of the nation's
       estuaries is rated as good. EMAP estimates
       water clarity using specialized equipment that
       compares the amount and type of light reaching
       the water surface to the light at a depth of
       1 meter. Water visibility of only 10% (10%
       of surface light reaches 1 meter) is used to
       represent poor conditions. This is equivalent
       to  being unable to see your hand in front of
       your face at a depth of 1 meter. As shown in
       Figure 2-3, poor light penetration is a problem
       in  only about 4% of estuarine waters.
          2j Dissolved Oxygen
         Dissolved oxygen conditions in the nation's
       estuaries are good. Both EMAP and NOAA's
       National Eutrophication Assessment examined
       the extent of estuarine waters with low
       dissolved oxygen. Often low dissolved oxygen
       occurs as a result of large algal blooms that
       sink to the bottom and use oxygen during the
       process of decay. Dissolved oxygen is a
       fundamental requirement for all estuarine life.
       Low levels of oxygen often accompany the
       onset of severe bacterial degradation,
       sometimes resulting in  algal scums, fish kills,
       and noxious odors, as well as loss of habitat
       and aesthetic values. This, in turn, results in
       decreased tourism and  recreational water use.
       EMAP estimates that only about 4% of
       bottom waters have  low dissolved oxygen
       (Figure 2-4). However, low dissolved oxygen is
         Water Clarity
         National Coast
                                   Not
                                 Measured
                                                 Not
                                             Measured
                                     32% 10-25%
  Good
         Fair
Figure 2-3.  Light penetration data and locations for sites with < 10/6 light
penetration (U.S. EPA/EMAP).
         Dissolved Oxygen
         National Coast
                                   Not
                                 Measured
                                                 Not
                                             Measured
                                        16% 2-5 ppm
  Good
Figure 2-4.  Estuarine sites with low dissolved oxygen and the distribution
of dissolved oxygen data for all sampled sites (U.S. EPA/EMAP).
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                                                                           Chapter 2    National Coastal Condition
As the heavier materials from the mountains make their way
through the plateau and piedmont in the streams, creeks, and
rivers of the water transport system, silts and clay are picked
up as well. By the time the heavier materials reach the coast,
they have become sand  and settle just offshore, while the
lighter silts and clays settle in the calmer waters behind the
barrier islands to become the black anaerobic mud of the
marshes. These marshes are some of the most productive
acres on earth. They supply an enormous amount of nutrients,
which make our waters  rich in marine life. At the same time,
these nutrients make our water turbid. Frequently the visibility
at Gray's Reef is poor due to the tremendous amounts of
nutrients in the water and the huge volume of sediments that
are being flushed from the mainland, especially during periods
of heavy rain (Photo: Gray's Reef NMS).
a problem in some individual estuarine systems like
the Neuse River Estuary, parts of Chesapeake Bay,
and the Gulf of Mexico hypoxia zone.

       Coastal Wetland Loss
   The loss of wetland habitats in the United States
is significant and, as a condition indicator, has
received a poor rating. During the 200-year period
from 1780 to 1980, nearly 50% of the existing
wetlands of the conterminous United States were
lost (Figure 2-5). Proportional losses along the West
Coast have been the largest (68%), although the
actual number of acres lost there is among the
smallest. Absolute and proportional acreages lost in
the Great Lakes and Gulf of Mexico coast are also
high (about 50% of wetlands existing in 1780). Even
in more recent years (mid- to late 1990s), wetland
losses  in southeastern and Gulf of Mexico states
continue at a high rate (more than 1% per year).
Currently, surveys are conducted only to estimate
the amount of acreage of wetlands every 10 years.
No surveys examine, at a national level, the
ecological condition of these critical coastal
habitats.

                                            Alaska
                                                   Hawaii  Center- All U.S.
                                                         minous U.S.
Figure 2-5. Proportion of total wetland acres existing in 1780 lost by 1980 in areas of the
United States (Dahl, 1990;Turner and Boesch, 1988).
                                                                           National Coastal Condition Report

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      Atmospheric  Deposition  of Nitrogen
         Atmospheric deposition occurs when
      pollutants fall out of the air (in the form
      of rain, snow, or microscopic particles,
      for example) onto the land or water.
      Pollutants can be released into the air
      from a variety of sources, including
      the burning of fossil fuels, industrial
      processes, cars and trucks, fertilizer,
      and the volatilization of animal wastes.
      Some may be carried by wind patterns
      for long distances away from  their place
      of origin before they are deposited.
  250 r

  200

 ; iso
 i
  100
  50
GDP
Population
VMT
Total Fuel Consumption
VOC and NOx Emissions
SO2 Emissions
    70 72 74 76 78 '80 '82 '84 '86
                   Year
                          '90 '92 '94 '96 '98
Trend in gross domestic product, population,
vehicle miles traveled, total fuel consumption,
combined volatile organic compound and
nitrogen oxides emissions, and sulfur dioxide
emissions, 1970 to 1998.
         Many coastal waters have experienced eutrophication problems related to excess
      nitrogen in the water. Atmospheric deposition is a large contributor to the nitrogen
      load of many coastal waters. Depending on the waterbody and watershed being
      considered, it is estimated that roughly one-quarter of the nitrogen in an estuary
      comes from air deposition.

         Nitrogen oxide (NOX) is one of the prevalent forms of nitrogen emitted to the air
      from human activities. The majority of NOX pollution comes from mobile sources
      such as cars and heavy-duty trucks and electric utilities, primarily coal-fired power
      plants. Combined emissions of several pollutants have decreased since 1970, even as
      the economy and population have grown (see graph). NOX emissions specifically
      increased between 1970 and 1997, followed by a slight decline in 1998.

         Numerous measures are planned or are already in place to help curb NOX
      pollution, including a new EPA rule that will require most states in the eastern half
      of the country to submit plans to reduce NOX emissions, which  travel downwind
      and cross state borders, contributing to smog formation in the eastern United States.
      It is expected that many states will target electric utilities for reductions. Acid rain
      reduction measures, strengthened tailpipe emission standards, and more stringent
      emission standards for heavy-duty vehicles will also help reduce NOX pollution.

         More information about air quality is available in the EPA document National Air
      Pollution Emission Trends, available on the Internet at
      http://www.epa.gov/ttn/chief/trends/trends98/trends98.pdf.
National Coastal Condition Report

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                                                             Chapter 2   National Coastal Condition
Water Quality in  the National
Estuarine Research  Reserves
  The NERRS System-Wide Monitoring
Program (SWMP) has measured water
quality (pH, conductivity, temperature,
dissolved oxygen, turbidity, and water
level) at 30-minute intervals in 22 Reserves
since 1995. This program provides
important information on habitat and
  10
 OJ

 P
   6-
                          Super-saturation
                              Hypoxia
      Winter
               Spring
                      Summer
                                Fall
Seasonal patterns of percent of time that dissolved
oxygen is less than 28% saturation (hypoxia) or more
than 120% saturation (supersaturation) across all
NERRS sites during 1997 and 1998.
water quality conditions at spatial and temporal scales not represented by other
national, regional, or state monitoring programs. Standardized protocols and data
management techniques developed for the Reserves ensure that data collection is
comparable among sites so that the resulting data are of high quality.

  Measurement of water quality parameters at short time intervals over extended
periods provides a valuable way of characterizing the episodic nature and trends
in environmental conditions that are not captured in point-in-time sampling
techniques. These data are also used to evaluate key ecosystem processes like gross
production and system metabolism. Examination of dissolved oxygen data collected
by SWMP indicates that few sites have chronic problems with hypoxia (too little
oxygen) or supersaturation (too much oxygen) (see graph). Considerable year-
to-year variability exists in the frequency and severity of dissolved oxygen levels
at several Reserves. Such large annual changes in hypoxia and supersaturation
appear to be related to site-specific circulation patterns, land use, climatic
conditions, pollution levels, and environmental conditions.

  Reserve water quality data are used to evaluate key ecological processes such as
system gross production, respiration, and net ecosystem metabolism. Production and
respiration vary by a  factor of 20 among reserves. In most of the reserves, more
oxygen (and carbon) was consumed than was produced (i.e., were heterotrophic).
Variability in metabolic rates may be affected by factors such as temperature regime,
salinity fluctuations, nutrient concentration, and algal abundance. Not surprisingly,
most of the sites showed a positive relationship between temperature and respiration
and production (higher rates at higher temperatures).
                                                             National Coastal Condition Report

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Chapter 2   National Coastal Condition
              Eutrophic Condition
          Data from NOAA's National Estuarine
       Eutrophication Assessment (Bricker et al.,
       1999) indicate that the nation's estuaries
       exhibit strong symptoms of eutrophication,
       which result in a rating of poor. When data
       on the symptoms of eutrophication are
       combined, they suggest that 40% of the
       surface area of the nation's estuarine waters
       exhibit high expression of eutrophic condition
       (Figure 2-6). Many of these waters are in the
       Mid-Atlantic and Gulf regions of the United
       States. Moreover, based on expert opinion,
       eutrophic conditions are expected to worsen
       in 70% of U.S. estuaries by 2020 (Bricker et al.,
       1999).
          One of the symptoms measured to
       determine the eutrophic condition in estuaries
       is the expression of chlorophyll a (as measured
       by concentration, spatial coverage, and
       duration). Chlorophyll a is a measure used to
       indicate the amount of microscopic algae,
       called phytoplankton, growing in a water-
       body. High expressions of chlorophyll a
       indicate problems related to overproduction
       of algae. High expressions of chlorophyll a
       occurred in 39 estuaries throughout the
       United States, representing approximately 40%
       of estuarine area (Figure 2-7). Approximately
       46% of estuarine  area has moderate
       expressions of chlorophyll a, although many of
       these areas are expected to show worsening
       eutrophic conditions over the  next 20 years
       (Bricker et al.,  1999).
          Eutrophic Condition
          National Coast
                                      Not
                                    Measured
    • Sites with High
      Expression of
      Eutrophic Condition
              High
              40%
  Good
          Fair
                Poor
Moderate
  25%
Figure 2-6. Eutrophic condition data and locations of estuaries with high
expressions of eutrophic condition (NOAA/NOS).
 Expression of Chlorophyll a
 National Coast
        Not
      Measured
    • Sites with High
      Expression of
      Chlorophyll a
                  High
                Expression
   High Expression = generally high
   chlorophyll a concentrations over a
   large spatial area and/or over a long
   period of time
   Moderate to Low Expression =
   generally lower concentrations of
   chlorophyll a over smaller areas or
   for a shorter period of time
                                                                                      Moderate
                                                                                       to Low
                                                                                      Expression
                                                                                        60%
                                                         Figure 2-7. Chlorophyll a data and locations of estuaries with high
                                                         expressions of chlorophyll a (NOAA/NOS).
      National Coastal Condition Report

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                                                                      Chapter 2   National Coastal Condition
        Sediment Contaminants
    National estuarine conditions, as
  measured by sediment contamination, are
  poor. Figure 2-8 shows the enrichment of
  sediments due to human sources. These
  measurements show that 40%, 45%, and 75%
  of U.S. estuarine sediments are enriched with
  metals, PCBs, and pesticides from human
  sources. One of the challenges of assessing the
  magnitude of sediment contamination is
  differentiating between contaminants such as
  organics and metals that may occur naturally
  in the earth's crust from those that are added
  from human activities. Pesticides and PCBs are
  relatively easy to evaluate, as they can only
  come from human activities. However,
  polycyclic aromatic hydrocarbons (PAHs) and
      Southern
     California
  Gulf of Mexico
   South Florida
     Southeast
    Mid-Atlantic
         U.S.
                           JSO
                                     J82
J29
T28
                                    75
                            153_
                     J99
                                        J93
                        34
                               59
                           46
                                 63
                                     77
                          40
                           45
                                   J75
             0     20    40    60    80    100
                        Percent Area
                   Metals  n PCBs  d Pesticides
metals can and do naturally occur in estuarine
sediments. The approach used to determine
these percentages is based on the methods
described in Windom et al. (1989). This
approach uses regression relationships
between natural sources of aluminum in
sediments and concentrations of other heavy
metals to determine the expected levels of
metals naturally occurring in estuarine
sediments. The extent of the difference
between the observed concentration of heavy
metals and the expected concentrations
(derived from the regressions) is the basis
for the determination of whether the
"contamination" is due to human sources.
Concentrations of heavy metals exceeding the
95% confidence level of the regression are
deemed affected by human sources.
  National and regional monitoring programs
conducted by EPA and NOAA provide
baseline information on the concentrations of
contaminants found in estuarine sediments
throughout the United States. Surface
sediments have been or are being examined
Figure 2-8. Regional sediment enrichment due to human sources.
                               Bottom samples from the Olympic Coast Sanctuary help researchers
                               map communities of bottom-dwelling organisms (Photo: Olympic Coast
                               NMS).
                                                                      National Coastal Condition Report

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Chapter 2    National Coastal Condition
       in over 2,000 locations throughout the
       estuaries of the United States. Measurements
       of over 100 contaminants have been taken at
       each site including over 25 PAHs, 22 PCBs,
       total PCBs, over 25 pesticides, and 15 metals.
       One to two percent of estuarine sediments
       in the United States show concentrations of
       contaminants (PAHs, PCBs, pesticides, and
       metals) that are above ERM guidelines
       (mid-range concentrations  of contaminants
       above which adverse effects on marine
       organisms are likely to occur), while 10%
       to 29% of sediments have contaminant
       concentrations between the ERM and lower-
       level ERL guidelines (concentrations below
       which  adverse effects on marine organisms are
       not likely to occur) (Figure  2-9).
          Figure 2-10 shows that most of the
       locations exceeding the ERM guidelines are
       in the Northeast coastal area, while the Gulf of
       Mexico Coast contains many locations with
       exceedances of the ERL for  five or more
       contaminants.
                                                                            Pesticides
                                                                                  ,>ERM
        70% < ERL
                             29% > ERL < ERM
                   Metals
                      I % > ERM
        76% < ERL
                            23% > ERL < ERM
                 PAHs/PCBs
                      I % > ERM
                           !0%>ERL< ERM
           
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                                                                           Chapter 2   National Coastal Condition
    NCAA's NS&T program has collected
  samples of shellfish tissue (mussels and
  oysters) from over  200 locations since 1986 to
  assess the bioavailability of sediment and
  waterborne contaminants. Information from
  selected sites throughout the United States
  shows that little change has occurred  in the
  bioavailability of contaminants to shellfish
  since 1986 (83% of contaminants have not
  changed in bioavailability). Of contaminants
  measured, 14% showed decreases in
  availability and only 3% showed increases
  (Figure 2-11).
                                           Chemical analyses of sediments can provide
                                         information on the concentrations and
                                         mixtures of potentially toxic substances in
                                         sediment samples. However, information
                                         gained from these analyses alone provides no
                                         direct measure of the lexicological significance
                                         of the chemicals. It is now possible to do an
                                         analysis of tissue residues based on the critical
                                         body residue concept. This could be used in
                                         the future as  an indicator of the lexicological
                                         condition of  bioaccumulated residues.

                         National Status and Trends Program: Bioaccumulation in Shellfish
                                                 National
           Seattle
  a 100
  | 80
  E
    60
  o  40
  •K  20
74
       23
      Increasing  No Change Decreasing
       San Francisco
      Increasing  No Change Decreasing
         San Diego
  J3 100
  | 80
  E
    60
  o  40
  •K  20
81
       15
      Increasing  No Change Decreasing
C
a
c

|S
O
u
uu •
8U •
60-
40-
in .
A -
83




3








14
| |
                                          Increasing   No Change  Decreasing
                                                                         Boston
o 40.
•K 20H
n
                                                                                   Increasing  No Change Decreasin
                                                                        New York
                                                                & 100
                                                                | 80-
                                                                E
                                                                               o  40
                                                                               •K  20
                                                                                            75
                                                                                    24
                                                                                   Increasing  No Change Decreasin
                                                                       Charleston
                                                                8 100
                                                                *? an
                                                                                   Increasing  No Change Decreasing
Galveston
% of Contaminant
SJ -fc. ON CO C
3 O O O O C

1
84
9
Increasing No Change Decreasing
J3 100-
c 80-
I 60-
c
O 40 •
U
"o 20-
** 0-
Tampa


0
91




9
Increasing No Change Decreasing
Figure 2-11. Trends in the bioaccumulation of contaminants in shellfish (NOAA/NOS).
                                                                          National Coastal Condition Report

-------
         Index of Watershed  Indicators
                                            EPA's Index of Watershed Indicators
                              • v/f        (IWI) combines 16 different indicators of the
        "v^vr                 Ci-      health of the nation's water resources. Seven
                                         indicators draw on monitoring data or other
                                         information sources that document the condition
                                         of the aquatic resources in USGS Cataloging Unit
                                         (CU) watersheds. The other nine indicators are
                                         viewed as documenting a watershed's vulnerability
                                         and susceptibility to pollution. These vulnerability
                                         indicators are not based directly on water quality
         monitoring data or assessments, but instead draw on whether watersheds have
         shown major shifts in population, the intensity of agricultural land uses, or the
         results of screening models. The indicator shows that 34% of the nation's coastal
         watersheds suffer from more serious water quality problems, while only 15%
         are categorized as having "better water quality." Few coastal watersheds have
         insufficient data.
           EPA's IWI national and watershed-level indicators  are found on the Internet:
         http://www.epa.gov/iwi.
http://www.epa.gov/iwi
                             Distribution of Assessed USGS
                            CUs in the Overall IWI Categories
                                   60
                                   50-
                           Percent of 40 -
                           Assessed
                             USGS  30-
                             CUs  20-
                                   10-
                                    0
15%


52%
34%


           CU  Better Water Quality
           CZI  Less Serious Water Quality
           CU  More Serious Water Quality
           CU  Data Sufficiency Threshold Not Met

         The overall watershed characterization is a compilation of condition and vulnerability indicators.

National Coastal Condition  Report

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                                                           Chapter 2   National Coastal Condition

Unified  Watershed Assessments
                                     Of coastal watersheds, 81 % were
                                     classified as needing restoration.
  The Clean Water Action Plan
in February 1998 announced the
opportunity for states and tribes
to provide Unified Watershed
Assessments (UWAs). The current process of water quality assessment for federal
agencies, states, and tribes is the use of multiple reporting mechanisms focused on
various water program areas. UWAs bring together the different water quality
assessment processes to better identify priorities for watershed restoration and
protection. The primary focus is to identify and assemble background data on
watersheds where nonpoint source pollution issues are major factors contributing to
water quality problems. The aim was to characterize watersheds, where suitable data
were available, into four categories:

• Watersheds Needing Restoration
• Watersheds Meeting Water Quality Standards or Goals
• Watersheds with Exceptionally High Quality Needing Protection Measures
• Watersheds Where Data Are Not Presently Available To Assign UWA Categories.

 More information on Unified Watershed Assessments is available on the Internet:
                        http://www.epa.gov/owow/uwa.
                                                          National Coastal Condition Report

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          Coastal  Habitat  Losses and
          Gains  -  Developing a
          National Strategy

            Habitat loss and degradation remain
          serious concerns for the health of the nation's
          coastal areas. Scientists estimate that we lost
          more than 50% of the nation's original
          wetland area between 1790 and 1980 (Dahl,
          1990; Turner and Boesch, 1988). Passage of
          the Estuaries and Clean Water Act of 2000
          enhances the strong federal commitment to
          estuarine habitat restoration. Many federal
          programs are already working to reverse the
          centuries-old trend of habitat decline in the
          United States. Federal agencies are involved
          in activities ranging from habitat protection
          and restoration to tracking acreage losses and
          gains. However, we lack a national system to
          monitor and evaluate the condition of
          coastal habitats, which prevents using habitat
          quality as an indicator of the status of our
          coastal wetlands.
            The Estuaries and Clean Water Act of 2000 promotes local conservation efforts and
          aims to restore 1 million acres of estuarine habitat by 2010. The legislation authorizes
          $275 million in federal matching funds over the next 5 years to support local restoration
          efforts. The measure also creates a council that will review project proposals for funding and
          develop a national strategy for estuarine habitat restoration.
            The Clean Water Action Plan of 1998 makes wetland restoration a high priority and sets a
          national goal of increasing wetland area by  100,000 acres per year by 2005. At least 20 federal
          offices and programs play a role in achieving this goal by protecting, restoring, and tracking
          the status of coastal habitats (see sidebar). Although these programs have been successful in
          restoring thousands of acres of wetlands, the quality of these restored habitats remains
          largely unknown.
            Several large-scale programs focus on protecting and restoring coastal habitat. For
          example, the Coastal Habitat Conservation  Program, which is administered by the U.S. Fish
          and Wildlife Service, has succeeded in restoring over 63,000 acres and protecting over
          166,000 acres of habitat in 14 high-priority sites around the country. Also, the USDA
          administers  a program to encourage voluntary wetland preservation and rehabilitation on
U.S. Department of Interior
   U.S. Fish and Wildlife Service
   Coastal Habitat Conservation Program
   National Park Service
   Bureau of Land Management

National Oceanic and Atmospheric
Administration
   Office of Ocean and Coastal Resource
    Management
   Damage Assessment and Restoration Program
   National Habitat Plan
   National Marine Fisheries Service
   National Estuarine Research Reserves
   National Marine Sanctuary Program
U.S. Environmental Protection Agency
   Office of Wetlands, Oceans, and Watersheds
   Great Waters Program
   National Estuary Program
   Chesapeake Bay Program Office
U.S. Department of Agriculture
   Natural Resource Conservation Service
   Wetland Reserve Program
   Water Bank Program
   U.S. Forest Service
U.S. Department of Defense
   U.S. Army Corps of Engineers
   Defense Environmental Restoration
    Program
National Coastal Condition Report

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                                                                  Chapter 2    National Coastal Condition

agricultural land. Although no data are available to determine the amount of coastal habitat
protected under this program, over 5,000 contracts have been enrolled in this nationwide
effort.
   The National Oceanic and Atmospheric Administration Damage Assessment Restoration
Program rehabilitates coastal habitat damaged by oil or other hazardous material spills. This
program has rehabilitated 26 sites nationwide, including Prince William Sound in Alaska.
The EPA's National Estuary Program has
protected or restored over 400,000 acres
of coastal habitat in 28 estuaries around
the country (see bar chart).
   Tracking the change in wetland
acreage is critical to assessing whether
we are achieving our restoration goals.
The U.S. Fish and Wildlife Service
administers a program known as the
National Wetlands Inventory (NWI),
which determines the location and
extent of our nation's wetlands. While
200-
150-
100-
50-
A-
• Protected
D Restored


n i





—











—








—


                                                  Baseline Year 2  Year 4  Year 6 Year 8
                                         Combined total of habitat acres restored or protected
                                         in connection with the National Estuary Program.
                                         Because the 28 programs began in 5 separate years, the
                                         time period refers to years since a program's inception.
this effort has produced extensive data
on the types and locations of wetland resources, it does not provide the information
necessary to assess the status, trends, or condition of wetlands on a national basis. Another
program, the NWI Status and Trends Program, reports on wetland gains and losses
nationally every 10 years. Detailed regional level information is available  for a few areas,
including the Texas coastal wetlands (see pie chart), Great Lakes wetlands, the Mid-Atlantic
region, Florida, and Alaska.
  While these efforts have helped us track wetland acreage, they do not provide information
on the health or condition of the nation's wetlands. EPA has established monitoring of
wetland condition as a national priority and is working with states and tribes to help
develop and implement monitoring programs to assess the effectiveness of wetland
protection programs. This information will tell us about the condition of our wetlands and
will help us understand whether coastal wetland protection and restoration efforts are
producing high-quality habitats.
                      Lost 9%
                   (59,700 acres)
     Baseline
 (61 3,000 acres)
                                        Loss of Texas coastal wetlands from the mid-1950s to
                                        early 1990s.While NWI has mapped a large percentage
                                        of the lower 48 states, this level of detail is available in
                                        only a few areas around the country.
                                                                  National Coastal Condition Report

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Chapter 2   National Coastal Condition
      Benthic Condition
  The condition of benthic communities
in the nation's estuaries is poor. Figure 2-12
shows that 22% of estuarine sediments are
characterized by benthic communities that are
in poor condition (i.e., the communities are
less diverse or abundant than expected,
populated by greater than expected pollution-
tolerant species, or contain fewer than
expected pollution-sensitive species as
measured by multimetric benthic indices).
Largely these differences appear to result from
contaminated sediments, hypoxic conditions,
habitat degradation, and eutrophication.
   Benthic organisms are also used in tests of
sediment toxicity. The NS&T Program and
EMAP have been conducting surveys of
sediment toxicity throughout the United States
since 1981. Over 2,500 locations have been
tested using a benthic organism as a test
animal  (Ampelisca abdita, an amphipod that
naturally occurs in estuarine sediments).
EMAP test results show that 10% of the
sediments in the estuaries of the United States
are toxic (resulting in significant mortalities)
to amphipods exposed to the sediments for
10 days (Figure 2-13). NS&T bioeffects surveys
of 22 major estuaries throughout the United
States show a similar figure of 11% of the
sediments in these estuaries are toxic to the
amphipod. The NS&T surveys also examined
two alternative toxicity tests using  sea urchin
fertilization and microbial  organisms as
indicators of chronic effects on estuarine
organisms (nonlethal effects). The results
showed that 43% to 62% of sediments in these
estuaries showed some toxic effects on
estuarine organisms (Table 2-1).
                                                                 Benthic Index
                                                                 National Coast
                                                                                             Not
                                                                                           Measured
                                                        Data
                                                        Collected
                                                        in 2000;
                                                        Available
                                                        in 2002
                                                         • Sites with Poor
                                                            Benthic Conditions
                           Not
                       Measured
           Poor
         Condition
/-- -\ 22%
                                                                     Good
                                                                   Condition
                                                                      56%
                                                                                             Fair
                                                                                          Condition
                                                                                             22%
                                                       Figure 2-12. Benthic index condition data and locations with poor benthos
                                                       (U.S. EPA/EMAP).
                                                         Sediment Toxicity
                                                         National Coast
          Not
        Measured
                                                                                                        Not
                                                                                                    Measured
                                                         • Sites that
                                                           Are Toxic
                                                           to Amphipods
         Toxic to Amphipods
                10%
                                                                                Not
                                                                              Toxic to
                                                                             Amphipods
                                                                                90%
                                                       Figure 2-13. Amphipod data and locations of sites with toxic sediments
                                                       (U.S. EPA/EMAP).
      National Coastal Condition  Report

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                                                                            Chapter 2   National Coastal Condition
  Table 2-1. Spatial Extent of Sediment Toxicity in Each of
  22 Estuaries Using Three Toxicity Tests (Long et al., 1996)
                              Percent of Area Toxic
                                    Sea Urchin
Estuary
Boston Harbor
Long Island Sound
Hudson-Raritan Estuary
Newark Bay
Winyah Bay
Charleston Harbor
Leadenwah Creek
Savannah River
St. Simons Sound
Biscayne Bay
Tampa Bay
Apalachicola Bay
St. Andrews Bay
Choctawhatchee Bay
Pensacola Bay
Sabine Lake
Southern California
Estuaries
San Pedro Bay
Mission Bay
San Diego River
San Diego Bay
Tijuana River
U.S. Estimate
Ampelisca
10
51
38
85
0
0
0
1

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      Exotic Species  in Coastal  Environments
                                                        Spartina alterniflora
                                                             D States in Native Range
                                                             0 States with Nonnative Records
                                        The spread of Spartina alterniflora to West Coast estuaries
                                        threatens native habitats in California, Oregon, and
                                        Washington.
  Scientists believe the spread of
exotic species is one of the five
most critical issues facing marine
environments (Wilcove et al.,
1998). Exotic species, also called
nonindigenous, nuisance, or
invasive species, or biotic invaders,
are "species that establish a new
range in which they proliferate,
spread, and persist to the
detriment of the environment"
(Ecological Society of America,
1999).
  Over the past decade, an
increasing number of nonindigenous aquatic fauna like the zebra mussel, Asian
clam, Japanese shore crab, Chinese mitten crab, European green crab, and Asian
green mussel; plant species  such as Spartina alterniflora, purple loosestrife, Brazilian
pepper, and Australian paperbark tree (Melaleuca quinquenervia); and pathogens like
cholera have been unintentionally introduced into nonnative coastal environments
with consequent harmful, sometimes devastating, ecological, public health, and
socioeconomic effects.
  These species can upset the  balance of coastal ecosystems through predation or
displacement of native species, as in the case of Spartina alterniflora, an East Coast
native that has spread rapidly and displaced native wetland species in northern
California, Oregon, and Washington state estuaries (see map). Exotic species can also
cause major disruption to power plants as well as to municipal and industrial water
treatment and distribution  systems by clogging those systems' intake pipes. For
instance, water users in the Great Lakes region now must bear the cost of tens of
millions of dollars spent each year to remove zebra mussels from the Great Lakes
and their tributaries.
National Coastal Condition Report

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                                                              Chapter 2   National Coastal Condition
        Distribution of the Chinese mitten crab in the San Francisco Estuary and its watershed. Solid
        blue area or lines indicates presence of the crab (California Department of Fish & Game).
  Unintentionally introduced pathogens can be deadly, especially when these
introductions go unnoticed. An introduced strain of cholera bacteria, possibly
released in the bilge water of a Chinese freighter, caused the deaths of 10,000 people
in Latin America in 1991. This cholera strain was then transported to the United
States from Latin America in the ballast tanks of ships that anchored in the port of
Mobile, Alabama. Fortunately, cholera bacteria were detected in oyster and finfish
samples in Mobile Bay. A public health advisory was issued, and no additional deaths
occurred from exposure to this pathogen.
  In the United States, the Aquatic
Nuisance Species (ANS) Task Force (Task
Force), an intergovernmental organization
co-chaired by the Fish and Wildlife Service and
NOAA, is the main federal body dedicated to
coordinating efforts nationwide that target
prevention, research, outreach/education,
and management of coastal and estuarine
  lebra
  Mussel
             Japanese Shore Crab
                  Task
                  Force
PttffeifM) 10 ffio pmtatiw ttxt control of iqtatK aaJaxt sgeoti
  www.ANSTaskForce.gov
exotic species. Information about Task Force activities can be found on the Internet
at http://www.ANSTaskForce.gov. Together with the Task Force, the U.S. Geological
Survey has organized a National Nonindigenous Aquatic Species (NAS) Information
Center that maintains updated information on nonindigenous aquatic species found
throughout the United States. Through the Center, lists of nonindigenous aquatic
species are available by state and by watershed for each of the major animal groups.
Those lists can be accessed on the Internet at http://nas.er.usgs.gov. In addition,
Sea Grant's National Aquatic Nuisance Species Clearinghouse maintains a library
that includes a searchable electronic database of published research and other
documentation on aquatic nuisance species. Sea Grant's Clearinghouse can be
accessed on the Internet at http://www.cce.cornell.edu/programs/nansc/nan_ld.cfm.
                                                             National Coastal Condition Report

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Chapter 2   National Coastal Condition
              Fish Tissue Contaminants
          National estuarine conditions as
       measured by fish tissue contamination are fair.
       Figure 2-15 shows that 26% of estuarine fish
       populations sampled show elevated levels of
       contaminants in their edible tissues. Moreover,
       of this 26%, 22% were fish with elevated levels
       of arsenic represented by organic arsenobetaines
       that are not considered toxic to humans. Thus,
       only 4% of examined fish have nonarsenical
       toxic compounds at significant concentrations
       in their edible flesh to be of concern to
       humans.
          The frequency and type of gross pathologies
       on fish taken in trawls in estuarine waters are
       indicators of overall  condition of fish
       populations. All fish collected by EMAP were
       examined for evidence of disease, parasitism,
       tumors, and lesions on the skin; malformations
       of the eyes; gill abnormalities; and skeletal
       curvatures. Nearly 100,000 fish were examined
       from U.S. estuaries; only 454 of the fish (0.5%)
       had external abnormalities (Table 2-2). Of the
       fish  examined, bottom-feeding fish (e.g.,
       catfish) had the highest frequency of disease.
       The number of fish with multiple gross
       pathologies increased in areas where the
       sediments contained high levels of multiple
       contaminants.
                                                                 Fish Tissue Contaminants
                                                                 National Coast
                                         Not
                                      Measured
 Data
 Collected
 in 2000;
 Available
 in 2002
   • Sites with
     Contaminated
     Fish Tissue
                      No
                 Contaminants
                     74%
           All Other
          Contaminants
              4%
                    Arsenic
                     22%
Figure 2-15. Contaminants in edible fish tissue (U.S. EPA/EMAP).
     Table 2-2.  Fish Pathologies by Province
     (U.S. EPA/EMAP)
      Province
Number of
   Fish
 Percent of
Pathologies
      Virginian
   13,421
    0.4
      Carolinian
   I 3,304
    0.3
      Louisianian
      and West Indian
  64,100
    0.7
      United States
  90,825
    0.5
                                                      The American lobster (Homarus americanus) finds homes
                                                      in rock piles or digs holes in muddy places. Its claws, used
                                                      for catching and crushing prey, can be regenerated if lost, as
                                                      is the case here. Lobsters come in a variety of colors, including
                                                      mottled reddish brown, white, and blue. (Photo: Dann
                                                      Blackwood and Page Valentine, USGS).
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                                                                    Chapter 2   National Coastal Condition
Assessments and Advisories
Clean Water Act Section 305(b)
and 303(d)  Assessments
Note: Great Lakes data are not included here.
The Great Lakes 305(b) assessment is presented
in Chapter 7.

   Of the 27 coastal states and territories,
22 rated general water quality conditions in
some of their estuarine waters. Information
was also submitted by the District of Columbia,
the Delaware River Basin Commission, and
the Interstate Sanitation Commission.
Together, these states assessed 28,687 square
miles of estuarine waters, which equals 32% of
the 90,465 square miles of estuarine waters in
the nation. Of these 27 coastal states, 15 rated
general water quality conditions for ocean
shoreline. They assessed 3,130 miles,
representing 5% of the nation's coastline
including 44,000 miles of coastline  in Alaska,
or 14% of the  22,419 miles of national
coastline excluding Alaska.
   States reported that 46% of the assessed
estuarine waters have good water quality that
fully supports  designated uses (Figure 2-16).
Of these waters, 10% are threatened for one or
more uses. Some form of pollution or habitat
degradation impairs the remaining 44% of
assessed estuarine waters. Most of the assessed
ocean shoreline miles (2,753 miles, or 88%)
have good water quality that supports a
healthy aquatic community and public
activities (Figure 2-17).
                                                 I
Photo® John Theilgard
     Fully
   Supporting
     46%
Impaired
  44%
         Fair
                  Threatened
                      10%
Figure 2-16. Water quality in assessed estuaries
(U.S. EPA).
                   Impaired
                     12%
      Fully
   Supporting
      80%
  Good    Fair    Poor
                          Threatened
                             8%
                                                    Figure 2-17. Water quality in assessed shoreline
                                                    waters (U.S. EPA).
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Chapter 2   National Coastal Condition
          After comparing water quality data to
       standards, states and tribes classify the waters
       into the following categories:
       Fully
       Supporting

             These waters meet applicable water quality
             standards, both criteria and designated use.
                    These waters currently meet water
                    quality standards, but states are concerned
                    they may degrade in the near future.
Threatened

Partially
Supporting
                   I These waters meet water quality
                   [standards most of the time but exhibit
                   I occasional exceedances.
       Not        I These waters do not meet water
       Supporting    quality standards.

          For the purposes of this report, waters
       classified as partially supporting or not
       supporting their uses are categorized as
       impaired. Twenty-five states reported the
       individual use support of their estuarine
       waters (Figure 2-18).  States provided limited
information on individual use support in
ocean shoreline waters (Figure 2-19). General
conclusions cannot be drawn from such a
small fraction of the nation's ocean shoreline
waters. Significantly, 11 states have adopted
statewide coastal fish consumption advisories
for mercury, PCBs, and other pollutants. These
advisories are not represented in the use
support numbers.
   Included in the  1998 303(d) list of impaired
waters are 1,402 waters located on the coast of
the conterminous United States (Figure 2-20).
These coastal waters represent 6% of the
nation's total number of 303(d) listed waters
(22,010). The major stressors that impair
303(d) listed waters are sedimentation,
nutrients, pathogens, toxics/metals/inorganics,
toxics/organics, mercury, and pesticides.
                in
                
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                                                                               Chapter 2   National Coastal Condition
           in
           
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         Coral  Reefs in  the United  States
           Coral reefs are among the most diverse and biologically complex ecosystems on
         earth. Now under threat from multiple stresses, coral reefs are deteriorating
         worldwide at alarming rates. It is difficult to generalize about the condition of coral
         reefs in the United States because of their broad geographic distribution and the lack
         of long-term monitoring programs that document environmental and biological
         baselines. However, it is clear that coral reefs are threatened wherever they are close
         to large concentrations of people. Data are available  to evaluate the status and trends
         of coral reefs at only a few sites.
           The only emergent coral reefs found off the continental United States are located
         in the Florida Keys and the Gulf of Mexico. Coral reefs are  also found in the
         Hawaiian Islands, the U.S. Virgin Islands, Puerto Rico, and U.S. territories in the
         Pacific including American Samoa, the Northern Mariana Islands, and Guam.
         A number of small U.S. territorial islands in the Pacific also have significant reef
         habitats  in their waters, including the islands of Howland, Baker, Jarvis, Johnston
         Atoll, Palmyra Atoll, Kingman Reef, and Wake. Few surveys of these reefs exist. All
         are within the 200 nautical mile U.S. Exclusive Economic Zone.
           The United States is one of many nations around  the world working to halt the
         coral reef crisis and protect, restore, and sustainably  use coral reef ecosystems for
         current and future generations. The U.S. Coral Reef  Task Force (CRTF) was
         established in June 1998 to lead the U.S. response to  this growing global
         environmental crisis. The CRTF is responsible for developing and implementing
         coordinated efforts to
            • Map and monitor U.S. coral reefs
            • Research the causes and solutions to coral reef degradation
            • Reduce and mitigate coral reef degradation from pollution, overfishing, and
              other causes
            • Implement strategies to promote conservation and sustainable use of coral
              reefs internationally.
           Members of the CRTF include  the heads of 11 federal agencies (including EPA
         and NOAA) and the governors of 7 states, territories, or commonwealths with
         responsibilities for coral reefs. The CRTF has produced a National Action Plan
         (available on the Internet at http://coralreef.gov)  that outlines its approach to
         conserve coral reefs within the United States. More information on federal
         programs to study and conserve coral reefs is also available on the Internet at
         http://www.coralreef. noaa.gov.
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                                                                   Chapter 2   National Coastal Condition
                  A Brief Introduction to Coral Reefs of the United States
  Florida—The coral reefs immediately off the Florida Keys are part of the world's third
largest barrier reef ecosystem, stretching 139 mi2 from south of Miami to the Dry Tortugas.
A major monitoring program is in place to collect information about the condition of coral
reef resources in the Florida Keys National Marine Sanctuary and the effectiveness of various
management strategies.
  Hawaii—The main Hawaiian Islands contain a large area of coral reefs (340 mi2) located
in both federal and state waters. In general, coral reefs in state waters are overfished and some
reefs are degraded due to coastal development.
  Texas/Louisiana—In the Gulf of Mexico, well-developed coral reefs are found 110 miles
south of the Texas/Louisiana border. These reefs, designated as the Flower Garden Banks
National Marine Sanctuary in 1992, are less impacted by most fishing and diving pressures
due to their remote location.
  Puerto Rico—Well-developed shallow reefs are located around the islands of Puerto Rico,
Mona, Culebra, and Vieques, where coral cover is up to 20%, and along the southwest coast
near LaParquera with about 20% coverage. Reefs in parts of Puerto Rico such as the Jobos Bay
National Estuarine Research Reserve, however, are in poor condition due to sewage disposal
and coastal erosion, and coral cover averages less than 5%.
  U.S. Virgin Islands—In general, the amount of living coral on these reefs has declined
and the amount of algae has increased in the last two decades. Hurricanes in 1989 and 1995
and white band disease produced the most damage to reefs; however, sedimentation from
runoff and overfishing through the use of fish traps are also problems.
  Guam—Nearly all coral reefs surrounding Guam are located  within territorial waters and
are  generally overfished and degraded as a result of various human activities, especially coastal
development leading to sedimentation. The commercial fish catch has declined over 70% in
the  past 15 years.
  Northern Mariana Islands—A chain of 16 volcanic islands starting about 100 miles
northeast of Guam and extending over 900 miles north, the Northern Mariana Islands
includes fringing reefs along most islands. The condition of the coral reefs varies due to
physical disturbances from storms and outbreaks of crown-of-thorns starfish, but because the
region is sparsely populated, human-caused disturbances such as overfishing and pollution are
most evident on the southernmost islands. Several marine reserves were established in 1997.
  American Samoa—This U.S. territory includes five volcanic islands  and two coral atolls.
The more remote islands are in good condition, with far more live coral cover and species
richness than the main island (Tutuila Island). Rose Atoll, located over 149 miles east of
Tutuila, is one of the world's most isolated and least disturbed atolls and is protected as a
National Wildlife Refuge.
  Source: NOAA State of the Coast Report, 1998.
                                                                   National Coastal Condition Report


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Chapter 2    National Coastal Condition
       State Fish  Consumption Advisories
         A total of 79 fish consumption advisories
       were in effect for estuarine and coastal marine
       waters of the United States in 2000, including
       71% of the coastal waters of the contiguous
       48 states (Figure 2-21). There are also 32 fish
       consumption advisories in the Great Lakes
       and their connecting waters. An advisory may
       represent one waterbody or one type of
       waterbody within a state's jurisdiction. Some
       of the advisories are issued as single statewide
       advisories for all coastal estuarine and/or
       marine waters within the state (Table 2-3).
       While the statewide coastal advisories have
       placed a large proportion of the nation's
       coastal waters under advisory, these  advisories
       are often issued for the larger size classes of
       predatory species (such as bluefish and king
       mackerel) because larger, older individuals
       have had more time to be exposed to and
       accumulate one or more chemical contami-
       nants in their tissues than younger individuals.
         The number and geographic extent of
       advisories can serve as indicators of the level
Table 2-3. Summary of Statewide Advisories for
Coastal/Estuarine Waters
State
Alabama
Connecticut
Florida
Georgia
Louisiana
Maine
Massachusetts
Mississippi
New Hampshire
New Jersey
New York
North Carolina
Rhode Island
South Carolina
Texas
Pollutants
Mercury
PCBs
Mercury
Mercury
Mercury
Dioxins
PCBs
Mercury
PCBs
PCBs, cadmium,
dioxins
Cadmium, dioxins
Mercury
PCBs
Mercury
Mercury
Species Under
Advisory
King mackerel
Striped bass
Bluefish
Shark
King mackerel
King mackerel
King mackerel
Striped bass
Bluefish
Lobster (tomalley)
Lobster (tomalley)
King mackerel
Bluefish
Lobster (tomalley)
American eel
Striped bass
Bluefish
Lobster (tomalley)
Lobster (tomalley)
Blue crab
(hepatopancreas)
King mackerel
Striped bass
Bluefish
King mackerel
King mackerel
-0
o
Hawaii

^
American Samoa
                                                                                     Number of
                                                                                     Advisories per
                                                                                     USGS Cataloging
                                                                                     Unit
       Figure 2-21. The number of coastal and estuarine fish consumption advisories per USGS cataloging unit.The count does not include
       advisories that may exist for noncoastal or nonestuarine waters. Alaska did not report advisories (U.S. EPA NLFWA, 2000c).
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                                                                       Chapter 2   National Coastal Condition
of contamination of estuarine and marine fish
and shellfish, but a number of other factors
must be taken into account. For example, the
methods and intensity of sampling and the
contaminant levels at which advisories are
issued often differ among the states. In the
states with statewide coastal advisories, one
advisory may cover many thousands of square
miles of estuarine waters and many hundreds
of miles of coastal waters.
   Although advisories in U.S. estuarine and
coastal waters have been issued for a total of
20 individual chemical contaminants, most
advisories issued have resulted from four
primary contaminants. These four chemical
contaminants—PCBs, mercury, DDT and its
degradation products DDE and ODD, and
dioxins/furans—were responsible for 77%
of all fish consumption advisories in effect in
estuarine and coastal marine waters in 2000
(Figure 2-22, Table 2-4). These chemical
contaminants are biologically accumulated
(bioaccumulated) in the tissues of aquatic
organisms to concentrations many times higher
than concentrations in seawater (Figure 2-23).
Concentrations of these  contaminants in the
tissues of aquatic organisms may be increased
at each successive level of the food chain. As a
result, top predators in a food chain may have
concentrations of these chemicals in their
tissues that can be a million times higher than
the concentrations in seawater. A direct
comparison of fish advisory contaminants and
               Dioxins
                10%
                      Mercury
                        19%
Figure 2-22.
Percentage of
estuarine and
coastal marine
advisories issued
for each
contaminant
(U.S. EPA
NLFWA, 2000c).
                    Table 2-4. Four Bioaccumulative Contaminants Were
                    Responsible for 77% of Fish Consumption Advisories in
                    Estuarine and Coastal Marine Waters in 2000.
                     Contaminant
           Number of
           Advisories
Comments
                     PCBs
              48      Five northeastern states
                      (CT, MA, NH, NJ, and Rl)
                      had statewide advisories.

                     Mercury
              24      Eight states (AL, FL, GA,
                      LA, MS, NC, SC,TX) had
                      statewide advisories in
                      their coastal marine
                      waters; 6 of these states
                      also had statewide
                      advisories for estuarine
                      waters.
DDT, DDE,
and ODD
Dioxins
and Furans
13
12
All DDT advisories were
in effect in California (12)
or the Territory of
American Samoa (1).
Statewide dioxin advisories
were in effect in ME, NJ,
                                               and NY. Historically,
                                               dioxin/furan advisories
                                               have been associated with
                                               pulp and paper mill
                                               effluents as the source
                                               of contamination.
Lake Trout

  Chinook Salmon <

        Sculpin
                                                          Bacteria and Fungi

                                                       Figure 2-23.  Bioaccumulation (U.S. EPA).
                                                                       National Coastal Condition Report

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Chapter 2   National Coastal Condition
       sediment contaminants is not possible because
       states often issue advisories for groups of
       chemicals. However, five of the top six
       contaminants associated with fish advisories
       (PCBs, DDT, dieldrin, chlordane, and dioxins)
       are among the contaminants most often
       responsible for a Tier 1 National Sediment
       Inventory classification (associated adverse
       effects to aquatic life or human health are
       probable) of waterbodies based on potential
       human health  effects (U.S. EPA, 1997).

       Classified  Shellfish-Growing  Waters
         In 1995,4,230 individual shellfish-growing
       areas containing 24.8 million acres of estuarine
       and nonestuarine waters were classified in
       21 coastal states. This represents an increase of
       2.1 million acres and 1,058 shellfish-growing
       areas compared to the 1990 Register. The
       increase is due primarily to the rise in the
       number of states classifying nonestuarine
       waters—in the 1995 Register, every state
       except Alabama reported classified areas in
       nonestuarine waters. Sixty percent of waters
       were classified as approved (Figure 2-24).
            Approved
              60%
Prohibited 11%

     Unclassified 13%

      Restricted 9%

    Conditionally
    Approved 7%
                      Poor
       Figure 2-24. Classification of shellfish-growing waters (1995
       Shellfish Register; NOAA, 1997).

         The top five pollution sources reported as
       contributing to harvest limitations were urban
       runoff, upstream sources, wildlife, individual
       wastewater treatment systems, and wastewater
       treatment plants. Compared to the 1990
Register, there is a significant decrease in
the acreage that is harvest-limited due to
contributions from industry, wastewater
treatment plants, and direct discharges. There
is an increase in the acreage limited by boating
and marinas, urban runoff, and agricultural
runoff.
  State shellfish management personnel
reported almost 500 shellfish restoration
activities taking place in harvest-limited waters
in 1995. Nineteen of the 21 coastal states were
engaged in at least one restoration activity.
Restoration of shellfish-growing areas includes
activities that improve water quality, restore
habitat, or enhance shellfish stocks. Examples
of restoration projects include connecting
residences with malfunctioning or failing
septic systems to a sewage collection system
to improve water quality, planting cultch to
increase suitable habitat, and releasing
hatchery-raised, disease-resistant spat
to increase production.

Beach Closures
  EPA gathered information on 2,051 beaches
nationwide (both coastal and inland) through
the use of a voluntary survey. The survey
respondents were almost exclusively local
government agencies from coastal counties,
cities, or towns bordering the Atlantic Ocean,
Gulf of Mexico, Pacific Ocean, or the Great
Lakes, although a few respondents  were state
or regional (multiple-county) districts. Data
are available only for those beaches for which
officials participated in the survey. EPA will
conduct the survey each year and display the
results on the BEACH Watch website.
  EPA's review of coastal beaches (U.S. coastal
areas, estuaries, and the Great Lakes)  showed
that, of the 1,444 coastal beaches responding
to the survey, more than 370 beaches or 26%
      National Coastal Condition Report

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                                                                       Chapter 2   National Coastal Condition
had an advisory and/or closing in effect
at least once during 1999 (Figure 2-25).
Approximately 13% of the coastal beaches
experienced at least one closure. Beach
closures were issued for a number of different
reasons, including sewage, elevated bacterial
levels, and preemptive reasons. The major
causes of beach closures included stormwater
runoff, pipeline breaks, combined sewer
overflows, and unknown causes.
  The majority of beach closings in the
United States are due to indications of the
presence of high levels of harmful micro-
organisms found in untreated or partially
treated sewage. Most of this sewage enters
the water from combined sewer overflows,
sanitary sewer overflows, and malfunctioning
sewage treatment plants. Untreated storm
water runoff from cities and rural areas can
be another significant source of beach water
pollution. In some areas, boating wastes and
malfunctioning septic systems can also
be important local sources of beach water
 pollution. People who swim in water near
 storm drains can be at increased risk of
 becoming ill. A recent epidemiological study
 in Santa Monica Bay, California, revealed that
 individuals who swam in areas adjacent to
 flowing storm drains were 50% more likely
 to develop a variety of symptoms than those
 who swam farther away from the same drain.
 Swimmers who did not avoid the drains
 experienced an increased risk for a broad
 range of adverse health effects.

Discovering treasures in the tidepools at Fitzgerald Marine Reserve
in Moss Beach (Photo: Joe Heath).
                                                                           Of beaches
                                                                           responding to the
                                                                           survey,the percent
                                                                           closed in each
                                                                           state at least once
                                                                           in 1999:
                                                                            Q 0-10
                                                                            Q 11-50
                                                                            B S|-|0°
                                                                                nNo Data
                                                                                Available
                                                                             9  Beach Closure
                                                                                in  1999
Figure 2-25. The percentage of beaches responding to the survey that closed at least once in 1999. Percentages are based on the
number of beaches in each state that reported information, not the total number of beaches. There were no BEACH Watch Survey
responses from Alaska (U.S. EPA).
                                                                       National Coastal Condition Report

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         Freshwater  Inflow to Estuaries—How Much  Is Enough?

           The productive habitat of an estuary relies on a balance between freshwater
         coming from inland sources and saltwater coming from coastal bays and the ocean.
         Seasonal flooding flushes marsh wetlands, transports food materials from the
         marshes into the estuaries, and removes or limits pollutants, parasites, bacteria, and
         viruses in the marshes. However, increasing demand is being placed on freshwater
         resources in the United States as a result of population growth, agriculture, and
         industrial needs, and it is not unusual for one river to be diverted in several locations
         to supply water to different communities. This can have consequences on the
         amount of freshwater that flows into an estuary and can cause alterations to the
         water quality (e.g., salinity) as well as to the quality of the area's habitat. A decrease
         in freshwater inflow can result in a decrease in the quantity of low-salinity wetlands,
         changes in tidal-flow patterns, and losses of vital estuary habitats. The timing of the
         arrival of freshwater to estuarine areas is important to plants and animals. Their life
         cycles are often triggered by or conditional to the salinity of the water. A few estuary
         programs, such as the Albemarle-Pamlico Sounds National Estuary Program, have
         problems with increased freshwater inflow due to hurricanes, large rain storms, or
         the draining of areas previously not connected to the estuarine system. Where too
         much freshwater inflow  occurs, diversion of streams may be used to mitigate the
         problem.

           The issue of freshwater inflow is so important that several federal programs,
         including EPA's National Estuary Program (NEP), consider freshwater inflow a
         priority problem that must be addressed. According to a survey of directors from
         the 28 NEPs conducted in the fall of 1999, the Albemarle-Pamlico Sounds National
         Estuary Program, Charlotte Harbor, and the San Francisco Estuary Project are the
         only NEPs that list freshwater inflow as a high-priority action item.  Several other
         estuaries list freshwater inflow as a concern but not as a top priority.
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                                                             Chapter 2  National Coastal Condition

  In Florida, Rookery Bay National Estuarine Research Reserve (NERR), part of the
national program run by NOAA, is leading efforts to restore natural freshwater
inflows to estuaries in south Florida. Rookery Bay staff received support from the
Florida Coastal Management Program to develop a watershed restoration and
management plan for local, state, and federal agencies. The plan identifies historic
and current surface water inflows in the reserve and makes specific recommendations
for restoring surface water flow.

  Rookery Bay NERR is also working to understand the effects of freshwater inflows
on fish species. Research by the Florida Department of Environmental Protection
indicates that alterations in freshwater inflows during Hurricane Andrew and other
major storm events damaged estuarine habitats within the reserve. Human impacts,
such as the construction of weirs (or dams), alter the flow of freshwater and nutrients
flowing into estuaries. The reserve recently received funding from the National
Marine Fisheries Service to restore natural freshwater inflow patterns. The reserve
proposes to computerize a weir on Henderson Creek, which would allow for more
natural flow of freshwater into the estuary. It is hoped that the studies associated with
this project will enable water management districts to  facilitate more natural water
flow impact on downstream salinity and aquatic communities in southwest Florida.
The computerization of the weir will provide for a more natural habitat for fish
populations.

  Source: NOAA State of the Coast Report, 1998.
                                                             National Coastal Condition Report

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         Developing a Nationwide
         Strategy  for Marine  Protected
         Areas

           Since the 1950s, a combination of
         legislation, voter initiatives, and regulations
         has created a complex collection of Marine
         Protected Areas (MPAs). Federal agencies
         alone manage over 300 areas that may meet
         the MPA definition. On May 26, 2000,
         President Clinton signed Executive Order
         13158, intended to protect significant
         natural and cultural resources within the
         marine and Great Lakes environments. The
         Order establishes a national system and
         inventory of MPAs consisting of a
         coordinated  network of local, state, tribal,
         and federal sites.
                               leffreys Ledge
                             venile Protection Area
                              tellwagen Bank NMS
                                Cape Cod NS
Marine Protected Areas near Cape Cod, MA.
This map shows examples of several types of MPAs
including a National Seashore, National Wildlife
Refuge, National Marine Sanctuary, and a Juvenile
Protection Area managed by the National Marine
Fisheries Service.
           The Order defines MPAs as "any area of
        the marine environment that has been
        reserved by federal, state, territorial, tribal,
        or local laws or regulations to provide lasting protection for part or all of the natural
        and cultural  resources therein." Under this definition, MPAs could include a wide
        variety of sites established  for different purposes in areas of coastal and ocean waters,
        the Great Lakes and their connecting waters, and submerged lands in areas of U.S.
        jurisdiction. Areas fitting this description include national marine sanctuaries, some
        national parks and national wildlife refuges, national estuarine research reserves,
        national estuary programs, some state and local marine parks, and some  fishery
        management areas (see the figure). Federal agencies will use this definition to create
        an inventory of all U.S. MPAs, one of the steps needed to help build a nationally
        consistent  system.
National Coastal Condition Report

-------
                                                               Chapter 2   National Coastal Condition

  The order outlines actions to be taken by
federal agencies to improve the management of
MPAs (see sidebar). Federal agencies will work
with an Advisory Committee composed of
nonfederal scientists, resource managers, and
other interested persons and organizations and
will establish a National MPA Center to meet
these goals.
                Goals outlined by Executive Order I 3 158
                to improve the management of Marine
                Protected Areas.
• Strengthen the management,
 protection, and conservation of
 existing MPAs
• Establish new or expanded MPAs
• Develop a science-based national
 system of MPAs representing
 diverse U.S. marine ecosystems
 and the nation's natural and
 cultural resources
• Avoid causing harm to MPAs
 through federal activities
• Provide state, territorial, tribal,
 and local governments with MPA
 information, technology, and
 management strategies to
 establish and manage MPAs
                                                              National Coastal Condition Report

-------

-------
Chapter
        Northeast
        Coastal
        Condition


-------
                                               "
Chapter 3
           Northeast Coastal
           Condition
r



                                     Ecological conditions
                                     in northeastern estuaries are border-
                                  line poor (Figure 3-1). EMAP data were
                                collected in the Virginian province from
             1990 to 1993. Over half of the area surveyed (57%) showed undegraded
             ecological conditions (Figure 3-2). However, 23% of the sediments were
             characterized by degraded biology, and 30% of the estuarine area had
             impaired human uses. These areas were widespread but were especially
             common in the Chesapeake Bay (and its tributaries),
             the Delaware River, the Hudson River, and western
             Long Island Sound.

               Northeastern coastal areas represent an extremely
             important commercial, population, and tourism
             center for the United States. The population of
             coastal counties on the Northeast Coast increased
             52% between 1970 and 1990 (U.S. Bureau of the
             Census, 1996). Northeastern coasts are also a critical
             ecological habitat for many important species of
             fish and migratory birds. This area includes two
             biogeographic provinces: the Virginian and the
             Acadian. The Virginian biogeographic province
             extends from Cape Henry, Virginia, at the mouth
             of the Chesapeake Bay to Cape Cod, Massachusetts.
             The Acadian province reaches from Cape Cod to

         National Coastal Condition Report

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                                                                   Chapter 3 \  Northeast Coastal Condition
   Overall
  Northeast
 Good   Fair
Poor]
    Water Clarity
    Dissolved Oxygen
    Coastal Wetlands
    Eutrophic Condition
    Sediment
    Benthos
    Fish Tissue
        Figure 3-1. The overall
        condition of northeastern
        estuaries is borderline poor
  Undegraded
     57%
               Degraded Biology and
                   Human Use
                      10%
                           Degraded
                            Biology
                             13%
              Degraded Use
                  20%
         Fair
                Poor
Figure 3-2. The condition of estuaries
on the Northeast Coast (U.S. EPA/EMAP).
                     Figure 3-3. The Northeast
                     Coastal Region includes
                     the Virginian and Acadian
                     provinces and extends from
                     Cape Henry, VA, to the
                     Maine-Canada border
the Maine-Canada border (Figure 3-3).
Coastal monitoring data exist for the north-
eastern United States from EMAP, NOAA's
NS&T Program, and NOAA's National
Estuarine Eutrophication Assessment.
EMAP data are available for the Virginian
biogeographic province, and NOAA's
programs cover the Virginian province and the
Acadian province to the U.S.-Canada border.
Coastal 2000 monitoring information will be
available for the Acadian province in 2002.
  The Virginian province contains more than
9,073 mi2 of estuarine area. Approximately
70% of estuarine surface area is in  12 large
(MOO mi2)  estuaries, including 4,427 mi2
in Chesapeake Bay, 1,291  mi2 in Long Island
Sound, and 795 mi2 in Delaware Bay. A
number of large urban and industrial centers
(e.g., New York City, Philadelphia, and
Baltimore) are close to the coast. In the
Virginian province, coastal areas are densely
populated, ranging from over 250 people per
square mile  in Delaware to almost 1,500 people
per square mile in New York and Pennsylvania
(Culliton et al., 1990). Coastline areas in the
Virginian province are used extensively for
industrial developments, port facilities,
residential and commercial establishments,
and recreational activities.
  The Acadian province extends along the
Northeast Atlantic Coast from the Avalon
Peninsula at the Canadian border to Cape
Cod and is characterized by well-developed
algal and biotic communities. The shoreline
is heavily indented and frequently rocky.
This region is not as densely populated
as the Virginian province, but it does contain
several population centers such as Portland,
Maine, and  Boston, Massachusetts. Some

                                                                    National Coastal Condition Report

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Chapter 3   Northeast Coastal Condition
       coastal counties of Massachusetts and New
       Hampshire have almost 1,300 people per
       square mile, and populations are projected to
       grow as much as 25% by 2015 (Culliton et al.,
       1990). Although no EMAP data exist for this
       biogeographic province, the NOAA National
       Estuarine Eutrophication Assessment examined
       the trophic state of 18 estuaries encompassing
       approximately 2,008 mi2 in this  region.

       Coastal Monitoring Data
            Water Clarity
         Water clarity for the Northeast received
       a rating of good. EMAP data show degraded
       water clarity (less than 10% light penetration
       to 1 meter depth) in 6% of estuarine waters
       in the Virginian province and reduced water
       clarity (less than 25% light penetration to
       1 meter depth) in 21% of estuarine waters
       in this region (Figure  3-4).
         Water clarity can affect ecosystem health
       in coastal and estuarine habitats. Submerged
       aquatic vegetation (SAV) requires  sunlight for
       photosynthesis and is particularly sensitive
       to reductions in water clarity. SAV provides
       habitat for a number of estuarine  and near-
       shore species—especially for juvenile fish—
       and is thus critical for maintaining the
       ecological integrity of these systems. Loss
       of SAV was reported in 12 of the 22 estuaries
       surveyed in  NOAA's National Estuarine
       Eutrophication Assessment. Severe loss of SAV
       is occurring in the main stem Chesapeake Bay,
       Patuxent River, Choptank River, Tangier/Poco-
       moke Sounds, and Gardiners Bay. Degraded
       water clarity was found in tributaries to the
       Chesapeake Bay, the Delaware River, western
       Long Island Sound, and the Hudson River.
         Water Clarity
         Northeast Coast
Figure 3-4. Light penetration data and locations for sites with < 10%
light penetration along the Northeast Coast (U.S. EPA/EMAP).
          Dissolved Oxygen
      Overall, levels of dissolved oxygen in
    Northeast estuaries are fair. EMAP studies
    found fair oxygen conditions (between 2.0
    and 5.0 ppm O2) in 20% of the bottom waters
    sampled and poor levels of dissolved oxygen
    (less than 2.0 ppm O2) in 5% of bottom
    waters (Figure 3-5). Severe oxygen deficien-
    cies occurred primarily within main stem
    Chesapeake Bay and the Potomac River, with
    isolated occurrences  in the Rappahannock
    River (Virginia), western Long Island
    Sound, and the waters near Providence,
    Rhode Island.
      National Coastal Condition Report

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                                                                             Chapter 3 \  Northeast Coastal Condition
           Coastal Wetland Loss
       Wetland losses in the Northeast are
     high—nearly 40% of all wetlands existing
     in 1780 disappeared by 1980 (Figure 3-6).
     Losses ranged from 9% in New Hampshire
     to nearly 75% in Connecticut and Maryland
     (Dahl, 1990).
           Eutrophic Condition
       Estuaries in the Northeast are in poor
     condition according to measures of eutrophic
     condition. Eutrophic conditions are high in
     60% of the estuarine area (Figure 3-7),
     including Chesapeake Bay and its tributaries,
     Delaware Inland Bays, Barnegat Bay, Great
     South Bay, Boston Harbor, Narraguagus Bay,
     Casco Bay, Sheepscot Bay, Englishman Bay,
     Cobscook Bay, and the St. Croix River.
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    Figure 3-6. Percent wetland habitat lost from 1780 to 1980
    by state and for the Northeast Coast overall (Dahl, 1990;
    Turner and Boesch, 1988).
          Dissolved Oxygen
          Northeast
          Coast
          Eutrophic
       *'  Condition
          Northeast Coast
                                             Not
                                             Included
                                             in Survey
     Sites with High
     Expression of
     Eutrophic Condition
• Low Dissolved
  Oxygen
Figure 3-5. Dissolved oxygen data for sampled sites and locations for
sites with less than 2 ppm for the Northeast Coast (U.S. EPA/EMAP).
                                                                                            Good    Fair
Figure 3-7. Eutrophic condition data and locations of estuaries
with high expression of eutrophic condition along the Northeast Coast
(NOAA/NOS).
                    National Coastal Condition Report

-------
        Water Quality of the Near Coastal Mid-Atlantic  Waters

           The near coastal waters of the Mid-Atlantic are significantly affected by discharges
        from three major coastal systems—the Hudson, the Delaware, and the Chesapeake.
        The Delmarva Peninsula is uniquely positioned between two of these major
        systems, where it serves as a major zone of influence on the near coastal water
        quality conditions of the Mid-Atlantic. As in most coastal areas, a wide range
        of point and nonpoint sources contribute nutrient  enrichment to the marine
        waters of the Mid-Atlantic. Changes over time in coastal waters are likely
        to be related to activities in the contributing watersheds. Population growth,
        development, and changes in land use patterns (see figure) can all have
        consequences on the condition of coastal waters.
           An 18-year study on the state of the  Mid-
        Atlantic near-shore coastal waters, summarized
        in a forthcoming report from EPA, showed that,
        although phosphorus levels were declining, the
        levels of dissolved inorganic nitrogen (DIN)
        in the area revealed significant increases in the
        range of 7% to 35% per year. Over the  10-year
        period from 1982 to 1992, DIN increased
        significantly in the Mid-Atlantic Bight  overall,
        which implies that biological productivity
        in the area may be affected and perhaps lead
        to eutrophic conditions. The increasing DIN
        concentrations in the Mid-Atlantic Bight are
        cause for some concern because the situation
        may eventually threaten both the economic
        and aesthetic value of the region.
                                                      Land cover of the Mid-Atlantic region (U.S. EPA).
National Coastal Condition Report

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                                                          Chapter 3  \ Northeast Coastal Condition
Massachusetts Bay

  Boston Harbor, once one of the most polluted waterways in the nation, is
in the final stages of a major cleanup. For 300 years, the harbor was the waste
disposal site for a growing metropolitan center. By the 1980s, harbor fish were
diseased, shellfish beds were closed, and swimming beaches were periodically
unsafe. A $3.8 billion cleanup program, begun by the Massachusetts Water
Resources Authority (MWRA), has significantly improved the environmental
quality of the harbor. Since 1989, the U.S. Geological Survey (USGS) has
been conducting research to understand and predict the fate of contaminants
introduced to Massachusetts' coastal waters.
                                                 OLD
                                             HARBOR OUTFALL
  NEW
BAY OUTFALL

                                                                           4
                                                                           2
                                                                           I
                                                                           1/2
                                                                           1/4
                                                                           1/8
                                                                           1/16
                                                                           1/32
                                          Computer simulations of effluent dilution from old
                                          and new outfalls (USGS).
Earth Science Applied
to Public Concerns
  Relocating the sewage outfall from
the harbor mouth to a new location
9 miles offshore in Massachusetts Bay
was a controversial step in the cleanup
program. Stellwagen Bank National Marine
Sanctuary, which supports commercial
and recreational fisheries and is home to
endangered species of whales, sea turtles,
and birds, is within 15 miles of the new
sewage outfall. Concern that the new sewage
outfall might threaten the environmental
quality of the Bay prompted a series of
computer simulations by the USGS. The
simulations of effluent dilution indicated that the effluent concentrations from the
new outfall would remain low throughout most of Massachusetts Bay (see figure).

What Is the Future of Contaminants?
  Understanding this coastal system and conducting long-term monitoring
are essential in order to assess environmental change. Despite cleaner waters,
pollutants that settle to the bottom with sediments can accumulate in the eco-
system, creating the potential for long-term problems. USGS studies in Boston
Harbor and Massachusetts Bay are designed to provide an understanding of how
sediments and associated contaminants are  transported and where they accumulate
in the Massachusetts Bay system. The results of these ongoing studies and maps
and simulations can be accessed on the Internet at http://geology.wr.usgs.gov/wgmt/
bostonharbor/boston.html. Additional information about coastal systems in the
Northeast can be accessed on the Internet at http://woodshole.er.usgs.gov.
                                                           National Coastal Condition Report

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Chapter 3   Northeast Coastal Condition
         NOAA's National Estuarine Eutrophication
       Assessment divides estuaries of the Northeast
       into two distinct zones: the North Atlantic
       and Mid-Atlantic. This division follows the
       division between the Acadian and Virginian
       biogeographic provinces with estuaries of the
       North Atlantic including all estuaries from
       Cape Cod, Massachusetts, to Cobscook Bay,
       Maine, near the U.S.-Canada border. The
       Mid-Atlantic region includes estuaries from
       Buzzards Bay, Massachusetts, to Tangier
       and Pocomoke Sounds near the mouth of
       Chesapeake Bay. Many northeastern estuaries
       exhibit eutrophic conditions. Of the 52 estuaries
       constituting the Northeast in the NOAA
       assessment, 16 (58% of estuarine area)
       exhibited elevated levels of chlorophyll a
       (Figure 3-8). However, in the far Northeast
       (Acadian province), these conditions are
       believed to be a natural occurrence with
       human inputs being only a minor contri-
       bution. Human impact is believed to be high
       in Boston Harbor and Plum  Island Sound.
         Eutrophic condition in Mid-Atlantic
       estuaries tells a very different story. Human
       impacts are believed to be high in 16 of the
       22 estuaries assessed. Nearly  half of the
       estuaries displayed high levels of eutrophi-
       cation, and all  estuaries showed at least some
       symptoms of eutrophication. Every estuary
       reported at least moderate expression of
       elevated chlorophyll a concentrations and
       all estuaries reported some problems with low
       oxygen. Thirteen of the estuaries experienced
       nuisance algae blooms with severe problems
       in Barnegat Bay, Delaware  Inland Bays, and
       the Patuxent River. The Choptank River,
       Tangier/Pocomoke Sounds, and Long Island
       Sound showed some expression of all six
       symptoms assessed in  NOAA's  study.
  Expression of Chlorophyll a
  Northeast Coast
  High Expression = generally high
  chlorophyll a concentrations over a
  large spatial area and/or over a long
  period of time.
  Moderate to Low Expression =
  generally lower concentrations of
  chlorophyll a over smaller areas or
  for a shorter period of time.
   • Sites with High
      Expression of
      Chlorophyll a
                     Moderate
                      to Low
                     Expression
                       42%
                                           High
                                         Expression
                                           58%
Figure 3-8. Chlorophyll a data for surveyed estuaries along the
Northeast Coast and locations of estuaries with high expression
of chlorophyll a (NOAA/NOS).
         Sediment Contaminants
     Sediment contaminant conditions in
   Northeast estuaries are poor. Sediments
   collected in EMAP sampling were analyzed
   for pesticides, metals, PCBs, and PAHs.
   For metals, ERM was exceeded in 4% of
   the area of estuarine sediments and ERL
   was exceeded in 41% of the area of estuarine
   sediments (Figure 3-9). This translates into
   more than 3,668 mi2 of sediments within
   the Virginian province with metals at
   concentrations high enough to cause effects
   in 10% of animals exposed. PCBs and PAHs
   exceeded ERM in 3% of the sediments of
   northeastern estuaries and exceeded ERL in
   27% of these sediments. Sediment pesticide
      National Coastal Condition Report

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                                                                    Chapter 3 \  Northeast Coastal Condition
       Sediment Contaminant Criteria
     ERM (Effects Range Medium) -
     The concentration of a contaminant
     that will result in ecological effects
     approximately 50% of the time
     based on literature studies.
     ERL (Effects Range Low) - The
     concentration of a contaminant that
     will result in ecological effects about
     10% of the time.
concentrations exceeded ERM in 2% of the
area of estuarine sediments and exceeded
ERL in 25%. In other words, over 2,317 mi2
of sediments within the Virginian province
contained elevated concentrations of PCBs,
PAHs, or pesticides that were high enough to
cause biological effects. Sediments exceeding
ERM levels occurred throughout the Northeast
but tended to be concentrated at the head of
the Chesapeake Bay, the lower Hudson River
and western Long Island Sound, and the
Delaware River. Multiple ERL exceedances
occurred in these same areas but also included
regions of the upper Potomac River, the James
River, the mid-Chesapeake Bay, and the
western half of Long Island Sound.
      Benthic  Condition
  Benthic communities in northeastern
estuaries are in poor condition (Figure 3-10).
For the locations that showed poor benthic
community quality, the co-occurrence of poor
                                                                                          Not
                                                                                          Included
                                                                                          in Survey
                                                         Sediment
                                                         Contaminants
                                                         Northeast Coast

II III
80
60
40
20

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41
jj

                                                                         PAHs/PCBs Pesticides   Metals
                                                Figure 3-9.  Sediment contamination for sampled sites and locations of sites
                                                with 5 > ERL or I > ERM along the Northeast Coast
                                                (U.S. EPA/EMAP).
                                                                                           Not
                                                                                           Included
                                                                                           in Survey
                                                         Benthic Index
                                                         Northeast
                                                         Coast
                                                                                           Fair
                                                                                        Condition
                                                                                           12%
                                                                                       Fair
                                                Figure 3-10. Benthic index condition data and locations with poor
                                                benthos along the Northeast Coast (U.S. EPA/EMAP).
                                                                     National Coastal Condition Report

-------
Chapter 3    Northeast Coastal Condition
       environmental quality (exposure) is shown
       in Figure 3-11. Of the 23% of the northeastern
       estuarine area that had poor benthos, 21%
       also showed hypoxic conditions, 35% showed
       contaminated sediments, 9% showed sediment
       toxicity, and 2% showed poor light conditions
       (high levels of total suspended solids).
       One-third of the locations that showed
       poor benthic community conditions had
       no sediment or water quality degradation
       (as measured by the EMAP program),
       although several of these sites are suspected
       of having poor nutrient water quality. These
                       locations were spread throughout the nine
                       Mid-Atlantic states.
                         A bioassay for sediment toxicity showed
                       less than 80% survival of Ampelisca in 9%
                       of the area sampled throughout the region.
                       Again, these stations tended to cluster in the
                       Chesapeake Bay, Delaware River, Raritan Bay,
                       and Long Island Sound. However, the highest
                       incidence of sediment toxicity occurred in
                       small estuaries, where  13% of sediments were
                       toxic to the test organism (Figure 3-12). Severe
                       toxicity (less than 60% survival)  occurred in
                       2% of the estuary sediments assayed.
   Poor Water/Sediment
   Quality Indicators that Co-Occur
   with Poor Benthic Condition
   Northeast Coast
                                                          Toxic Sediments
/

Not
Included
in Survey
Northeast Coas
r
• Sites Where
Survival of
Amphipods
Was Less
Than 80%
                         Sediment
                       Contaminants
                           35%
Light
 2% Toxicity
                                                                                                    Not
                                                                                                    Included
                                                                                                    in Survey
  Ampelisca Survival <
Virginian Province 1990-1993
IUU
80
60
40
20
0




9 10 3 13

                                                                                                 River   Small
 Figure 3-11. Indicators of poor water/sediment quality that co-occur
 with poor benthic condition in northeastern estuaries (U.S. EPA/EMAP).
                                                                                   Province  Large
                                                                               Province  = Entire Area
                                                                               Large    = Estuaries > 97 mi2
                                                                               River    = Tidal Rivers > 97 mi2
                                                                               Small    = Estuaries < 97 mi2
                    Figure 3-12. Amphipod data and locations with toxicity > 20% along
                    the Northeast Coast (U.S. EPA/EMAP).
      National Coastal Condition Report

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                                                                      Chapter 3 \  Northeast Coastal Condition
      Fish Tissue Contaminants
  Conditions of estuaries in the Northeast
as measured by fish tissue contaminants are
poor. Analyses for tissue residue contaminants
in the edible portions of selected fish were
conducted throughout the Virginian province.
Toxic levels of contamination were detected
in the filets of fish caught at four locations
within the Delaware River, several locations
in the mainstem of the Chesapeake Bay, and
single sites in  Raritan Bay, Narragansett Bay,
and Buzzards  Bay, amounting to about 30%
of the fish examined  (Figure 3-13). However,
almost all of these elevated concentrations
were for arsenic (21%) and almost all arsenic
ingested by fish is converted to a nontoxic
form (arsenobetaines). Thus, 9% offish
examined (white perch, weakfish, catfish,
and Atlantic croaker) contained elevated levels
of contaminants (primarily metals). Only
0.4% of over 13,000 fish examined showed
signs of external pathologies.
                                             Not
                                             Included
                                             in Survey
         Edible Fish Tissue
         Contaminants
         Northeast Coast
Sites with
Contaminated
Fish Tissue

                                    All Other
                                  Contaminants
                                       9%
                                             Arsenic
                                              21%
                            No
                       Contaminants
                            70%
Figure 3-13. Contaminants in edible fish tissues for sampled sites alon£
the Northeast Coast (U.S. EPA/EMAP).


                                   _
                                             •







                                                                     This flounder is one of
                                                                     several flatfish species found on
                                                                     the banks and  in the basins of
                                                                     the Stellwagen Bank National
                                                                     Marine Sanctuary
                                                                     (Photo: Dann Blackwood and
                                                                     Page Valentine, USGS).
                                                                       National Coastal Condition Report

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                                                 Casco Bay
                                                 Pollution
                                                 Sources
                                                                                 Key
                                                                          National Pollution Discharge
                                                                          System Points (effluent)
                                                                          DEP-Licensed Overboard Discharges
                                                                          Combined Sewer Outflows
                                                                          Prohibited SheUfish Areas
                                                                          Restricted or Conditional Shellfish
                                                                          Areas
                                                                          Shellfish Areas

Casco  Bay Estuary  Project

  The Casco Bay Estuary Project is a
cooperative effort between concerned
citizens and local, state, and federal
governments to protect Casco Bay,
which lies at the heart of Maine's most
populated area. Although the Casco
Bay watershed represents only 3% of
Maine's total land mass, it holds nearly
25% of the state's population. Residents
depend on the bay and its watershed
for multiple needs such as drinking
water, recreation, food, transportation,
industry, and waste disposal. However,
when the Casco Bay Estuary Project
began in 1990, few scientific studies
had assessed the human impact on the
pollutant levels of Casco  Bay. Little was
known about the pollutants in the sediments, the circulation patterns, or the sources
of pollution (see figure). To ensure a better scientific basis for making policy decisions,
the Casco Bay Estuary Project commissioned several major studies.
  One study used Maquoit Bay as an example of predicting loadings of nitrogen and bacteria
through the use of water quality loading models. Maquoit Bay is small, shallow, free from point
sources of pollution and extensive urban development, and subject to excess concentrations
of fecal coliform bacteria, and it suffered from a harmful algal bloom in 1988. Marine  algal
blooms are often triggered by excess nitrogen, so a model was developed to assess Maquoit
Bay's potential sources of nitrogen (e.g., agricultural and residential runoff, sewage). The study
found that septic systems, particularly failing ones, and manure or fertilizer were the largest
sources of nitrogen and bacteria entering the bay. This finding provided a basis for developing
measures to reduce pollutant loading to the bay.
  Visit the Casco Bay Estuary Project on the Internet  at http://www.cascobay.usm.maine.edu.
                                                Pollution sources of Casco Bay (Casco Bay Estuary Project).
National Coastal Condition Report

-------
                                                          Chapter 3  \ Northeast Coastal Condition
                                                            "fewl
Delaware River Basin  Commission
  Approximately 6.4% of the nation's population
relies on the waters of the Delaware River Basin for
drinking and industrial use, and the Delaware Bay
is only a day's drive away for about 40% of the
U.S. population; yet the basin drains only 0.4%
of the total continental U.S. land area. These
figures indicate the tremendous potential for
anthropogenic pressures to be placed on the
estuary and the need for a strong governing
body to manage and protect the water quality
of the river and estuary.
  The Delaware River Basin Commission (DRBC)
was formed in 1961 by the signatory parties to the
Delaware River Basin Compact (Delaware, New
Jersey, New York, Pennsylvania, and the federal
government) to share the responsibility of
managing the water resources of the Basin. The Compact created a regional
body with legal powers to oversee a unified approach to managing the river
system without regard to political boundaries.
  Today, the cleanup of the Delaware is hailed as one of the world's top water
quality success stories. As a result of cleanup efforts, shad and other fish species
are increasing in number. Currently, there is a major program on PCBs under way,
resulting in fish consumption advisories covering the Delaware Bay and estuary.
Other recent action by the DRBC has targeted certain toxic pollutants to ensure
that stream quality objectives in the tidal Delaware River are met as part of a
continuing program to protect human health and aquatic life. Two of the pollutants,
1,2-dichloroethane (DCE) and tetrachloroethene (TCE), have been identified by
EPA as "probable human carcinogens." Under the resolution adopted by the DRBC,
dischargers of DCE and TCE will be required to collect 1 year of effluent data
to measure the magnitude and variability of these pollutants. This will be done
before wasteload allocations are established for individual discharges.
  The DRBC also plays an active role in community outreach and education
efforts and conducts an annual water quality "snapshot" effort in which community
participants are asked to collect and analyze water samples for water quality
indicators such as dissolved oxygen and nitrates. This event and the resulting
report bring attention to the Basin and to the public's interest and commitment
to protecting its water resources.
  Visit the DRBC online at www.state.nj.us/drbc.
                                                           National Coastal Condition Report


-------
Chapter 3   Northeast Coastal Condition
       Assessments and Advisories

       Clean  Water Act Section 305(b)
       and 303(d) Assessments
         The states on the Northeast Coast assessed
       11,791  (77%) of their 15,173 estuarine square
       miles for their 1998 305(b) reports. Forty-eight
       percent of the assessed estuarine waters fully
       support their designated uses, 16% are
       threatened for one or more uses, and the
       remaining 36% are impaired by some form
       of pollution or habitat degradation
       (Figure 3-14). Individual use support
       for estuaries is shown in Figure 3-15.
               Fully
             Supporting
               48%
                                    Impaired
                                      36%
                    Fair
                                Threatened
                                    16%
           Figure 3-14. Water quality in assessed estuaries
           on the Northeast Coast (U.S. EPA).
                                                                        ' V
                                                                                          ' - -:-
                  12,000
                  10,000-
              «>   8,000 -
              v
              rt
                  6,000 -
                  4,000 -
                  2,000 -
    Fully Supporting
    Threatened
    Impaired
Tl
                         Aquatic Life
                          Support
              Fish
          Consumption
Shellfishing
                                                 Designated Use
 Primary
Contact -
Swimming
Secondary
 Contact
           Figure 3-1 5. Individual use support in assessed estuaries on the Northeast Coast (U.S. EPA).
      National Coastal Condition Report

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                                                                         Chapter 3  \  Northeast Coastal Condition
  The states on the Northeast Coast assessed
401 (5%) of their 7,669 shoreline miles.
Ninety-five percent of the assessed shoreline
miles fully support their designated uses and
no uses are reported as threatened, but 5% are
impaired by some form of pollution or habitat
degradation (Figure 3-16). Individual use
support for the Northeast shoreline is shown
in Figure 3-17.
                        Impaired
                           5%
          Fully
       Supporting
          95%
Threatened
    0%
     Good
             Fair
                   Poor
   Figure 3-16. Water quality in assessed shoreline
   waters on the Northeast Coast (U.S. EPA).
                         The states reported individual use support
                       for their assessed estuarine and coastal waters
                       as shown in Table 3-1.
                     Table 3-1.  Individual Use Support for Assessed Coastal
                     Waters Reported by the States on the Northeast Coast
                     under Section 305(b) of the Clean Water Act
                     Individual     Assessed Estuaries  Assessed Shore-
                     Uses         Impaired (mi2)      line Impaired (mi)

Aquatic Life
Fish
Consumption
Shellfish
Harvesting
Swimming
Secondary
Contact
1,875 (I8%)a
3,934 (36%)
1,488 (14%)
272 (3%)
40.2 (2%)
0
18 (36%)
18 (7%)
0
0
                      1 Represents percentage of assessed waters impaired for each
                      individual use.
1J
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                                                    Casco Bay Seabird habitats, showing sensitive areas
                                                    in yellow. Source: U.S. FWS Gulf of Maine Program.
                                             Seabird Habitats
                                             (Common Eider, Common Tern)

Coastal  Habitat Study
of the Gulf of Maine

  The Gulf of Maine watershed includes
more than 43,000 square miles of land in
Maine, New Hampshire, and Massachusetts.
The watershed includes the biologically
productive Gulf of Maine as well as coastal
habitats (salt marshes, mudflats, sandy
beaches, intertidal zone, and islands) and
inland streams, rivers, lakes, ponds, bogs,
deciduous and coniferous woodlands,
grasslands, and alpine tundra. The Gulf
of Maine watershed provides productive
nurseries for many marine fish; riverine
pathways for historically abundant populations of anadromous fish; important
habitat for breeding, migratory, and wintering waterbirds and neotropical migrants;
and vital habitat for nationally threatened and endangered species. Unfortunately,
increasing habitat loss and degradation from sprawling development, wetland and
associated upland loss, overharvesting, oil spills, pollution, and other cumulative
effects of development threaten the integrity of the Gulf of Maine watershed.
  The U.S. Fish and Wildlife Service's Gulf of Maine Coastal Program has initiated a
comprehensive project to identify, map, and rank important fish and wildlife habitat
for priority species throughout the Gulf of Maine watershed. Biologists selected
more than 60 species that regularly inhabit the Gulf of Maine watershed and are
experiencing decline. Biologists are identifying, ranking, and mapping habitat for
all of these species—from actual sitings or by developing habitat suitability models
reflecting the environmental requirements for  each species. Once species-specific
maps are created using in-house geographic information system (GIS) technology
(see figure), composite maps ranking habitats for all species will be developed. All
of the data collected are available on a CD-ROM that will help land use planners
and decision makers focus conservation efforts in areas of greatest biological value
(Contact: Stewart Fefer, U.S. Fish and Wildlife Service, Gulf of Maine Coastal
Program, 207-781-8364).
  More information is available on the Internet at http://gulfofmaine.fws.gov.
National Coastal Condition Report

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                                                           Chapter 3 \  Northeast Coastal Condition
                                            Areas of the coastal habitat project in the New York
                                            Bight watershed (U.S. FWS Coastal Program).
Comprehensive Study
of Habitat Complexes
of the New York Bight
Watershed
  The U.S. Fish and Wildlife Service's
Southern New England-New York Bight
Coastal Program study Significant Habitats
and Habitat Complexes of the New York Bight
Watershed identifies and describes essential
habitats of key marine, coastal, and terrestrial
species inhabiting the New York Bight
watershed study area to help guide
ecologically sound land use decisions
and land protection efforts. This habitat
assessment includes 20 million acres of
habitat, ranging from deep marine waters
to freshwater wetlands and encompasses New
York-New Jersey Harbor, the tidal waters of the Hudson River, the watersheds
of the harbor and tidal Hudson, and the upland drainages of New Jersey and
southern Long Island (see map).
  The GIS analysis of habitat data identified 35 large, landscape-scale habitat
complexes, such as barrier beaches, coastal lagoons, unfragmented blocks of forest
or wetland areas, pine barrens, and freshwater tidal marshes. These large habitat
complexes contain individual habitat units identified as important to a single
species, multiple species, or communities.
  Specific site narratives describe the location, boundaries, ecological communities
and processes, various habitat subunits, general ownership or protected status,
and the ecological significance or uniqueness for each large habitat complex. Site
narratives  also assess threats to the long-term integrity of both species populations
and the physical structure of the habitat and recommend conservation consider-
ations and protection/restoration strategies. The report's overview chapters discuss
physiographic regions, marine zones, regionally significant populations, species
groups, and natural communities.
  You can view the New York Bight study on the Internet at
http://www.fws.gov/r5snep/snep5.htm.

                                                            National Coastal Condition Report

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Chapter 3    Northeast Coastal Condition
                                                 1998 303(d) Impairments for the Northeast Coast
s
r Pesticides
Listed Miles
\6%
Mercury 1 3%
Toxics/Organics 1 9%
Toxics/Metals/
Inorganics
Pathogens
Nutrients
Sedimentation
\7%
^33%
|46%
] 13%
3 SO 100
Pesticides
Mercury
Toxics/Organics
Toxics/Metals/
Inorganics
Pathogens
Nutrients
Sedimentation
(
Listed Area
0%
]3%
0%
\3%
^20%
\7\%
0%
) SO 100
Percent Impaired Percent Impaired
Miles Square Miles
       Figure 3-18. 303(d) listed waters on the Northeast Coast and the percentage of miles impaired by the major pollutant categories
       (note that a listing may be impaired by multiple pollutants) (U.S. EPA).
         There are 697 waters located on the
       Northeast Coast that are listed as impaired
       under Section 303(d) of the Clean Water Act.
       The percentage of listed waters impaired by
       each of the major pollutant categories is
       shown in Figure 3-18.

       State Fish  Consumption Advisories
         In 2000, 7  of the 10 Northeast Coast states
       (Connecticut, Maine, Massachusetts, New
       Hampshire, New Jersey, New York, and Rhode
       Island) had statewide consumption advisories
       for fish in coastal waters, placing 100% of  their
       coastal and estuarine areas under advisory.
       Due in large  part to these statewide advisories,
       an estimated 81% of the coastal miles of the
       Northeast Coast and 67% of the estuarine area
       were under fish consumption advisories. A
       total of 36 different advisories were active  in
       2000 for the estuarine and marine waters of
       the Northeast Coast (Figure 3-19).
           - Long Island Sound

         New York Harbor


         Chesapeake Bay
Number of
Advisories per
USGS Cataloging
Unit



|    | 5-9
     No Advisories
                                                           Figure 3-19. The number offish consumption advisories on
                                                           the Northeast Coast active in 2000 (U.S. EPA).
      National Coastal Condition Report

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                                                                        Chapter 3 \  Northeast Coastal Condition
  Advisories in the Northeast were in effect
for 10 different pollutants (Figure 3-20). The
majority of the listings (51%) were for PCBs.
The James River estuary in Virginia was listed
for kepone, while Boston Harbor was listed for
multiple pollutants.
  PCBs 51%
                Arsenic 3%
                Cadmium 5%
                Chlordane 5%
                Other 7%
                Mercury 7%

                Dioxins 22%
Figure 3-20. Pollutants responsible for fish consumption
advisories in northeastern coastal waters (U.S. EPA NLFWA,
2000c).
These species were under advisory in 1999 for at least some
part of the Northeast Coast:
White catfish
American eel
Largemouth bass
Smallmouth bass
Striped bass
Bluefish
Common carp
Channel catfish
Flounder
Goldfish
Atlantic needlefish
White perch
Scup
Blue crab
Bivalves
Lobster
Lobster (tomalley)
Rainbow smelt
Tautog
Walleye
Blue crab (hepatopancreas)
Classified Shellfish-Growing Waters
   In the Northeast, 9.6 million acres of
shellfish waters (44% of the national total)
were classified for shellfish harvest in 1995
(Figure 3-21). Of the classified acreage, 82%
were approved and 18% were harvest-limited.
Of the region's classified acreage, 37% is
located in estuarine waters and 63%  in
nonestuarine waters. The top four pollution
sources affecting harvest limitation in
estuarine and nonestuarine waters are
wastewater treatment plants, urban runoff,
direct discharges, and upstream sources.
   Two of the top shellfish species in  the
Northeast (rated high or medium in  abun-
dance) are hard clams (1.2 million acres)
and surf clams (1.5 million acres). Twelve
percent of surf clams and 28% of hard clams
are located in waters that do not allow direct
harvesting (i.e., restricted, conditionally
restricted, and/or prohibited).
   Total classified acreage in the  Northeast has
increased by over 1.5 million acres since the
1990 Register. While all three North Atlantic
states (Maine, New Hampshire, and

                                                                                Prohibited 11%
                                                                                Restricted 4%
                                                                                Conditionally Restricted <0.1%
                                                                                Conditionally Approved 2%
                                                                Figure 3-21. Classification of shellfish-growing waters for
                                                                the Northeast (1995 Shellfish Register; NOAA, 1997).
                                                                         National Coastal Condition Report

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Chapter 3   Northeast Coastal Condition
       Massachusetts) reported increases in the
       total amount of classified acreage, the biggest
       change occurred in Massachusetts, where
       classified nonestuarine acreage almost tripled.
       In the Mid-Atlantic states (Rhode Island,
       Connecticut, New York, New Jersey, Delaware,
       Maryland, and Virginia), approved waters
       increased from 79% in 1990 to 84% in 1995.
       Five of the eight Mid-Atlantic states reported
       a decline in classified acreage located in
       estuarine waters.

       Beach  Closures
         Of 566 coastal beaches in the Northeast
       that reported information to EPA, only 8.8%
       (50 beaches) closed for any period of time
       in 1999. The highest percentage of closed
       beaches was  in New York, where 19% of the
       26 beaches providing information were closed
       at least once in 1999. Figure 3-22 shows the
       percentage of beaches in each county that
       were closed at least once in  1999 and the
       locations of beach closures. Four states
       (Delaware, Maine, New Hampshire, and
       Virginia) did not have any coastal beach
       closings in 1999.
         Over 98% of the beaches in the Northeast
       that reported information have monitoring
       programs. Virginia had the  lowest percentage
       of monitored beaches in 1998, but in 1999 five
       of the six beaches reporting from Virginia had
       a monitoring program in place.
         Causes for beach closures in the Northeast
       were primarily related to elevated bacteria
levels. The sources of bacteria were generally
different types of runoff, such as stormwater,
and sewer overflows. In a number of cases,
the elevated bacteria levels were thought to
have been caused by wildlife. Often beaches
were preemptively closed due to the threat
of potentially high bacteria levels. In New
Jersey, a number of beaches were closed
due to raw sewage spills.
                            Percentage of
                            beaches closed
                              per county:
                               0-10
                               11-50
                               51-100
                               No Data
                               Available
                               Beach Closure
                               in 1999
O
                                                          Figure 3-22. Percentage of beaches in each county that
                                                          were closed at least once in 1999, of those beaches providing
                                                          information to EPA.
      National Coastal Condition Report

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                                                            Chapter 3  \  Northeast Coastal Condition
Summary
                      Ecological conditions in northeastern estuaries are borderline
                    poor (Figure 3-23). The primary problems in northeastern
                    estuaries are sediment contamination, high eutrophic condition,
                    significant loss of wetlands, and poor fish and benthic condition.
                    Over 25% of sediments are enriched or exceed the ERL/ERM
                    guidance. Sixty percent of the northeastern estuarine area has a
                    high potential of increasing eutrophication or existing high
                    concentrations of chlorophyll a. About 10% of fish have elevated
                    levels of contaminants in their edible tissues. Nearly 40% of all
                    wetlands along the Northeast Coast were eliminated between 1780
                    and 1980. Although some of these problems are improving, benthic
                    community degradation, fish tissue contamination, and increasing
                    eutrophic condition are worsening. Figure 3-23 displays the
                    condition of the major indicators of ecological condition in
                    northeastern estuaries. Although hypoxia issues exist in the deep
                    trough of the Chesapeake Bay, dissolved oxygen conditions are
                    generally fair for northeastern estuaries. Water clarity is generally
                    in good condition. However, benthic community condition is
                    borderline poor in these estuaries and appears to be worsening.
                    Eutrophic condition, sediment contamination, and fish tissue
                    contamination are  considered to be in poor condition throughout
                    the Northeast. The condition of these resources indicates that the
                    estuaries of the Northeast Coast are among the most threatened in
                    the country. However, major programs are being implemented and
                    designed to address the existing problems. Continued monitoring
                    is also necessary to track the progress of cleanup efforts and to
                    prevent the worsening of conditions throughout the Northeast.

                         Overall
                         Northeast
                             Fair
                           Water Clarity
                           Dissolved Oxygen
                           Coastal Wetlands
                           Eutrophic Condition
                           Sediment
                           Benthos
                           Fish Tissue
Figure 3-23. The overall condition of
northeastern estuaries is borderline poor
                                                             National Coastal Condition Report

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        The Chesapeake  Bay Program
                                                                  Chesapeake Bay Program
                                                                   A Watershed Partnership
  The Chesapeake Bay Program is a unique regional
partnership directing and conducting the restoration of the
Chesapeake Bay since the signing of the historic Chesapeake
Bay Agreement of 1983. The Chesapeake Bay Program
partners are the states of Maryland, Pennsylvania, and
Virginia; the District of Columbia; the Chesapeake Bay
Commission, a tri-state legislative body; and EPA.
  In the late 1970s, scientific and estuarine research on the Bay pinpointed three
areas requiring immediate attention: nutrient overenrichment, dwindling underwater
bay grasses, and toxic pollution. Once the initial research was completed, the Bay
Program evolved as the means to restore this exceptionally valuable resource, with
its highest priority being the restoration of the Bay's living resources—its finfish,
shellfish, bay grasses, and other aquatic life and wildlife.
  The second Chesapeake Bay Agreement was signed in 1987, which created the
infrastructure and policy vision for which the Chesapeake Bay Program is known.
The centerpiece of the 1987 Agreement was a goal to reduce nutrients entering the
Bay by 40% by 2000. This history of setting strong numerical goals within a date-
certain timeframe has become a hallmark of the Bay Program and is repeated in
the new Chesapeake 2000 agreement.
National Coastal Condition Report

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                                                                 Chapter 3 \  Northeast Coastal Condition
  The Chesapeake 2000 agreement lays the foundation and sets the course for the Bay's
restoration and protection for the next decade and beyond. Highlights include
    • Water Quality - "By 2010, correct the nutrient and sediment related problems
      in the Chesapeake Bay and its tidal tributaries sufficiently to remove [them]
      from the list of impaired waters under the Clean Water Act."
    • Sprawl and Growth Commitments - A commitment to reduce the rate of
      harmful sprawl development of forests and farms by 30% by 2012 and to
      permanently preserve 20% of the Bay watershed by 2010  (currently about
      16.4% is preserved).
    • Mixing Zone Elimination - Voluntary elimination of mixing zones for both
      bioaccumulative and persistent chemicals by 2010.
    • Wetlands - Commits to a "no net loss" of existing wetlands, a net gain of
      25,000 acres by 2010, and a commitment to develop and implement locally
      generated wetlands preservation plans on 25% of the land area of the
      Chesapeake Bay watershed by 2010.
    • Education and Public Access - Provide every school student in the Bay
      watershed with an outdoor Bay or stream experience by the time he or she
      graduates from high school. Also, increase public access to the Bay and its
      tributaries by 30% by 2010 and add 500 miles of water trails by 2005.
    • Oysters/Crabs - The new agreement commits to a tenfold increase in the
      oyster population by 2010 and to setting of new Baywide harvest targets
      for blue crabs in 2001.

                                                                  National Coastal Condition Report

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        Long Island  Sound  Dissolved Oxygen
                                            Timing and Duration of Hypoxia in Long Island Sound
                                                       1987 - 1990 University of Connecticut
                                                1991 - 1999 Connecticut Department of Environmental Protection
  The Long Island Sound drainage basin is one of the most densely populated
areas in the country. Approximately 8.4 million people live within the basin,
including 3.5 million in New York City. Intense resource use and human population
pressures have placed a significant strain on Long Island Sound. Passage of the Clean
Water Act has led to measurable improvements in water quality, and many sources
of pollution are now regulated. However, the problem of low dissolved oxygen
remains a significant concern to the overall health of the sound.
  Low dissolved oxygen
occurs primarily during
the summer months in the
central and west portions
of Long Island Sound. When
dissolved oxygen levels fall
below 3 mg/L, the health
of aquatic life tends to  suffer.
Water in Long Island Sound
tends to be highly stratified
in the late summer months
and has probably always
experienced some periods of low dissolved oxygen. However, human inputs of
nutrients add to the problem, resulting in more significant damage to ecologically
and economically important organisms.
  A time series of
average dissolved oxygen
concentrations in Long
Island  Sound shows generally
decreasing measurements
from 1963 to 1993. Condi-
tions appear to improve from
1987 to 1993, but remain
substantially degraded with
                                              31
                                             Jan
           61
          Feb
92  122   153  183
Mar April May  June
  SO;	
214  244  275
July  Aug Sept

   Hypoxic (<3.0 mg/L) Period
305
Oct
336
Nov
366
Dec
                                          I960
                                               1965
                                                     1970   1975
                                                               1980
                                                                     1985
                                                                           1990
                                                                                1995   2000
        respect to measurements
        made prior to 1970.
National Coastal Condition  Report
Average Bottom Dissolved Oxygen Concentrations (mg/L)
from 1963 to 1993. Yearly averages reveal generally decreasing
dissolved oxygen concentrations with stabilizing conditions from
1973 to 1987 and a slight recovery from 1987 to 1993.

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Chapter
         Southeast
         Coastal
         Condition

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Chapter 4
           Southeast Coastal
           Condition        6&&
             The condition of southeastern estuaries
             is fair, although monitoring has shown evidence of human-induced
             stress in some areas (Figure 4-1). From 1994 to!995, EMAP collected
             environmental stressor and response data from approximately
             200 locations throughout southeastern estuaries. In 1996 and
             1997, a smaller number of sites were examined in North Carolina.
             Approximately 54% of the estuarine area of the southeastern United
             States was in good ecological condition, meaning that, in the most
             stressful period of the year, neither environmental stressors (nutrients,
             contaminants, etc.) nor conditions for aquatic life showed  any signs
             of impairment (Figure 4-2). Alternatively, 35% of the estuarine area
             showed indications of impaired aquatic life use and 17% showed
             impairments to human use.
               The estuaries of the southeastern United States (Carolinian province)
             extend from Cape Henry, Virginia, through the southern end of the
             Indian River Lagoon along the east coast of Florida (Figure 4-3).
             Also included in southeastern estuaries is a region of the West Indian
             province from Indian River Lagoon through Biscayne Bay.  The popu-
             lation of coastal counties along the Southeast Coast increased 64% from
             1970 to 1990 (U.S. Bureau of the Census, 1996). The estuarine resources
             are diverse and extensive, covering an estimated 4,487 square miles.
          '  V             I

 National Coastal Condition Report

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                                                                  Chapter 4    Southeast Coastal Condition
   Overall TT
  SoutheastX  7
    Good  Fair
        Water Clarity
        Dissolved Oxygen
        Coastal Wetlands
        Eutrophic Condition
        Sediment
        Benthos
        Fish Tissue
  Figure 4-1. The
  overall condition of
  southeastern estuaries
  is fain
            Impaired Human and
              Aquatic Life Use
                   6%
 Unimpaired
    54%
    Impaired Aquatic
        Life Use
         29%
  Good
         Fair
                Poor
 Impaired
Human Use
   11%
Figure 4-2. The condition of estuaries on the
Southeast Coast; estimates are within + 10/6 based
on 4 years of sampling (U.S. EPA/EMAP).
Figure 4-3. Southeastern
estuaries (Carolinian province).
There is an increasing need for effective
management of these resources given the
predicted influx of people and businesses to
southeastern coastal states over the next few
decades and the ensuing pressures on the
coastal zone of this region. Culliton et al.
(1990) estimated that the coastal population
in the southeastern United States will have
increased by 181% over the 50-year period
from 1960 to 2010 (the largest percentage
increase in the country).
   To help support resource management
needs, EPA and NOAA initiated a compre-
hensive study of the quality of southeastern
estuaries in 1994 by coordinating components
of two nationwide monitoring efforts, the EPA
Environmental Monitoring and Assessment
Program and the NOAA National Status and
Trends Program. The southeastern study was
designed to provide yearly estimates of the
condition of estuaries  based on a variety
of biological, chemical, lexicological, and
aesthetic indicators (see Hyland et al., 1996;
Hyland et al., 1998). Prior to this study, there
was no comprehensive regionwide ecological
information available. In addition to this
monitoring effort, the Coastal 2000 initiative
includes follow-up monitoring in the four
southeastern states (North Carolina, South
Carolina,  Georgia, and Florida). Also, since
the late 1980s, NOAAs NS&T Program and
its Intensive Bioeffects Surveys have collected
contaminant bioavailability and sediment
toxicity data from several southeastern
locations  (Long et al.,  1996).

                                                                    National Coastal Condition Report

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Chapter 4
Southeast Coastal Condition
       Coastal Monitoring Data
             Water Clarity
         Water clarity in southeastern estuaries
       is fair. Water clarity was estimated by light
       penetration through the water column using
       a Secchi disc. Poor water visibility was defined
       as a Secchi depth of less than 0.5 m. This is
       equivalent to 10% of surface light reaching
       1 meter. About 4% of southeastern estuaries
       had a Secchi depth of less than 0.5 meter
       (Figure 4-4).
         The presence of debris introduced by
       humans ("trash") in surface and bottom
       waters provides an obvious sign of degra-
       dation. Floating debris was observed in
       about 2% of southeastern estuaries, and
       bottom debris was observed in about 17%
       (Figure 4-5). Two other indicators of human
       disturbance are the presence of oil and grease
       and the presence of noxious odors. Oil
       was observed in 4% of the sediments in
       southeastern estuaries, and noxious odors
       were detectable in 24% of these sediments.
                                                   Water Clarity
                                                   Southeast
                                                   Coast
                                          Figure 4-4. Light penetration data and locations for sites with a Secchi
                                          depth of <0.5 m (U.S. EPA/EMAP).
                                                                            The sand makes a temporary
                                                                            rest in the broad deltas that
                                                                            form where the outflowing
                                                                            freshwater collides head-on
                                                                            with the incoming saltwater
                                                                            (Photo: Grays ReefNMS).
      National Coastal Condition Report

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                                                                        Chapter 4    Southeast Coastal Condition
       Dissolved  Oxygen
  Dissolved oxygen conditions in
southeastern estuaries are generally good.
EMAP estimates for southeastern estuaries
show that about 2% of the bottom waters
in southeastern estuaries have low dissolved
oxygen (less than 2 ppm) on a continuing
basis in late summer (Figure 4-6). Most of
this 2% is in the Neuse River and southern
portions of Pamlico Sound.
      Anthropogenic Debris, Presence of Oil,
          and Noxious Sediment Odors
            in Southeastern Estuaries
    100

     80

     60

     40

     20

     0
D Bottom Debris Present
n Surface Debris Present

   17
        13   13
                              22
         Province
                   Large
                             River
                                      Small
IUU
80

60
40
20

• Oil

• ON
-
-
-
4
1^-^
0
Present in Sediments

Present on Surface


15
. •

         Province
                   Large
                             River
                                      Small
    100
     60
    40 -
     20
• Odor Present
24


7
24


55


         Province
                   Large
                             River
                                      Small
       Province = Entire Area
       Large  = Estuaries > 97 mi2
       Rivers = Tidal Rivers > 97 mi2
       Small  = Estuaries < 97 mi2

Figure 4-5. The presence of anthropogenic debris provides
an obvious sign of degradation.
                                                     Coastal Wetland Loss
                                                 Wetland losses in the Southeast are high-
                                               40% of all wetlands existing in 1780 had
                                               disappeared by 1980 (Figure 4-7). Losses
                                               ranged from 23% in Georgia to nearly
                                               50% in North Carolina (Dahl, 1990).
                                                 From the 1970s to the 1980s, acreage
                                               of wetlands has continued to decline
                                                                Dissolved Oxygen
                                                                Southeast
                                                                Coast

                                                                                                 Fair
                                           Figure 4-6. Dissolved oxygen data for sampled sites and locations for
                                           sites with less than 2 ppm for the Southeast Coast (U.S. EPA/EMAP).

                                               Coastal Wetland Habitat Loss from 1780 to 1980
                                                   f60
                                                §
                                              b-  S0
                                              < o
                                              *£  40
C 2  20
1) +J
V. 8  10
**  0
                                                                   49   D Percent Wetland Loss
                                                                                         46
                                                                          27
                                                                                  23
                                                                                                40
                                                                               II
                                                       North   South   Georgia  Florida  Southeast
                                                      Carolina  Carolina
                                            Figure 4-7. Percent wetland habitat lost from 1780 to 1980
                                            by state and for the Southeast overall (Dahl, 1990;Turner and
                                            Boesch, 1988).
                                                                          National Coastal Condition  Report

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Chapter 4
Southeast Coastal Condition
       throughout all the states in the Southeast
       (Figure 4-8). These losses range from 1%
       decline in this decade for Georgia to a 16%
       decline in North Carolina.
              Eutrophic Condition
          The condition of southeastern estuaries as
       measured by eutrophic condition is fair. High
       eutrophic conditions were observed in only
       13% of the area of southeastern estuaries
       (Figure 4-9). However, estimates predicted
       an expected increase  in eutrophic condition
       in nearly all southeastern estuarine waters
       by 2020. Expression of eutrophic condition
       was high in four North Carolina estuarine
       river systems (Pamlico, Pungo, Neuse, and
       New Rivers) and in the St. Johns River in
       Florida. No estuarine systems in Georgia or
       South Carolina or the remainder of the east
       coast of Florida expressed high eutrophic
       conditions, although  five others showed
       moderate conditions.
          High expressions of chlorophyll a were
       observed during NOAA's National Estuarine
       Eutrophication Assessment for about 14% of
       the area of southeastern estuaries. These high
       expressions were observed predominantly in
       estuaries  in North Carolina and for a single
       estuary in Florida (Figure 4-10).

          Coastal Wetlands Habitat Loss from  1970 to 1980
Z IB
0
Wetland Acreage L
j 
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                                                                  Chapter 4    Southeast Coastal Condition
      Sediment Contaminants
  The condition of southeastern estuaries as
measured by sediment contamination is fair.
Sediment contaminants have been estimated
by EMAP and NOAA (bioeffects surveys) for
the estuaries of the southeastern United States.
Sediment contaminant concentrations
measured by NOAA NS&T bioeffects surveys
rarely exceeded ERM guidelines (Long et al.,
1996), with exceedances occurring only for
pesticides in two estuarine systems (Mud River
and Cumberland River, Georgia, Figure 4-11).
EMAP reported that ERL guidelines were
exceeded for all of the major groups of
sediment contaminants, albeit at low rates
(5% of area) for PAHs and PCBs. There were
greater ERL exceedances for pesticides (33%)
and heavy metals (39%), although most of
the pesticide ERL exceedances were for DDT
metabolites, dieldrin, and lindane. Total DDT
(DDT plus metabolites DDE and ODD)
exceeded 6 ppm in nearly 27% of estuarine
sediments and ranged from 0 to 214 ppm.
Lindane exceeded its  ERL value in 12% of
sediments. Concentrations of some chemicals
(pyrene, chlordane, DDT and its metabolites,
dieldrin, and lindane) were found in the
EMAP survey in excess of upper-level ERM
guidelines in a few places (similar to the low
incidence of ERM exceedances found in
NOAAs NS&T bioeffects surveys). While con-
centrations of most sediment contaminants
are relatively low, enrichment rates for south-
eastern estuarine sediments range from 11%
(PCBs) to nearly 99% (PAHs) (Figure 4-12).
Only three  contaminants (total DDT, arsenic,
and nickel) exceeded ERL guidelines for
more  than 15% of the southeastern estuarine
sediments. Therefore, sediment contamination
is rated fair for the Southeast.
         Sediment Contaminant Criteria
     ERM (Effects Range Medium) - The
     concentration of a contaminant that will
     result in ecological effects approximately
     50% of the time based on literature studies.
     ERL (Effects Range Low) - The
     concentration of a contaminant that will
     result in ecological effects about 10% of
     the time based on literature studies.
         Sediment
         Contamination
         Southeast
         Coast

IUU
80
60
40
20

• > ERL
33
5
0


39
| |

                                PAHs- Pesticides  Metals
                                PCBs
Figure 4-11. Sediment contamination for sampled sites and locations
of sites with 5 > ERL along the Southeast Coast (U.S. EPA/EMAP).
100

80

60

40

20

 0
               99
                                     34
              PAHs    PCBs   Pesticides   Metals
   Figure 4-12. Percentage of estuarine sediments in
   southeastern estuaries that are enriched and range from
   I I % (PCBs) to nearly 99% (PAHs) (U.S. EPA/EMAP).
                                                                    National Coastal Condition Report

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Chapter 4
Southeast Coastal Condition
             Benthic Condition
         Benthic indicators in southeastern estuaries
       are fair. Benthic index estimates (Hyland et
       al., 1996; Hyland et al., 1998; Van Dolah et al.,
       1998), based on EMAP surveys, indicate that
       17% of the estuarine area has highly degraded
       benthic resources (Figure 4-13). Of the
       4,487 square miles in the Carolinian province,
       nearly 772 square miles were ecologically
       degraded with respect to benthos. Exami-
       nation of the  distributions of the benthic
       index in the three sampling strata within the
       southeastern United States (large estuaries,
       large rivers, and small estuaries/rivers) showed
       that large tidal rivers (Neuse and Pamlico
       Rivers and Indian River Lagoon) had the
       largest proportion of their estuarine bottom
       area represented by poorer than expected
       benthic communities (about 70%), while large
       estuaries (open areas such as Pamlico Sound)
       had the smallest proportional representation
       (about 5%). Degraded benthic conditions
       were observed throughout the Southeast.
         Sediment toxicity from EMAP and
       NOAA NS&T bioeffects data show that
       small proportions of southeastern sediments
       are toxic based on bioassays with the marine
       amphipod Ampelisca abdita (Figure 4-14).
       NOAA bioeffects surveys of Winyah Bay,
       Charleston Harbor, Leadenwah Creek,
       Savannah River, and St. Simons Sound
       showed 0 to 1.2% of their sediments to be
       toxic. EMAP surveys generally confirm these
       findings, but show no toxicity associated with
       sediments from Savannah River or St. Simons
       Sound. In addition, EMAP surveys showed
       significant sediment toxicity associated with
       the Chowan River, some small estuaries in
       North Carolina, and Newfound Harbor
       on the Indian River Lagoon in Florida.
                                                     Benthic Index
                                                     Southeast
                                                     Coast
                                                                                        Fair
                                                                                     Condition
                                                                                        14%
                                           Figure 4-13. Benthic index condition data and locations with poor
                                           benthos along the Southeast Coast (U.S. EPA/EMAP).
                                             Toxic Sediments
                                             Ampelisca Test
                                             Southeast Coast
                                                                         Ampelisca Survival < 80%
                                                                       Carolinian Province 1994-1997
                                                                                  Nontoxic
                                                                                    96%
                                                       Figure 4-14. Amphipod data and locations with toxicity > 20% along
                                                       the Southeast Coast (U.S. EPA/EMAP).
      National Coastal Condition Report

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                                                                        Chapter 4    Southeast Coastal Condition
        For the locations that showed poor benthic
     community quality, the co-occurrence of poor
     environmental quality (exposure) is shown in
     Figure 4-15. Of the 20% of the southeastern
     estuarine area that had impaired benthic
     assemblages, 61% also showed contaminated
     sediments, 1% showed sediment toxicity, 17%
     showed hypoxia, and 1% showed poor light
     conditions (high levels of total suspended
     solids). Of the locations that showed poor
     benthic community conditions, 20% had
     no sediment or water quality degradation (as
     measured by the EMAP program). Locations
     without obvious associations between adverse
     biological and exposure conditions occurred
     primarily in Pamlico Sound and Indian River
     Lagoon. Recently, Pamlico Sound has displayed
     some tendencies to hypoxic conditions in late
     summer, and Indian River Lagoon has shown
     increasing nutrient concentrations.
                                                                 Fish Tissue  Contaminants
                 The condition of southeastern estuaries
               as measured by fish tissue contaminants is
               good. Samples of spot, Atlantic croaker, blue
               crab, and penaeid shrimp were analyzed for
               presence of contaminants in edible tissues.
               All measured analytes in these samples were
               below corresponding Food and Drug
               Administration action levels for PCBs,
               pesticides, and mercury. Using international
               guidelines for other metals and pesticides,
               it was shown that arsenic guidelines were
               exceeded at 16% of sampled locations or in
               about 8% of the fish population examined
               (Figure 4-16). Arsenic found in fish and
               shellfish is almost completely altered into
               organic arsenobetaines that are not toxic to
               humans. Thus, only one location (about 1%
               of fish examined) showed elevated levels of
               nonarsenical  contaminants in edible tissues.

  Poor Water/Sediment
  Quality Indicators that
  Co-Occur with Poor Benthic
  Condition Southeast Coast
   O  None
   O  DO
   O  Sediment
      Contaminants
   •  Toxicity
   •  Light
                                               DO
                                               17%
                           Sediment
                         Contaminants
                             61%
Toxicity
  1%
                    Edible Fish Tissue
                    Contaminants
                    Southeast
                    Coast
                                                                                       All Other
                                                                                     Contaminants
                                                                                         |%     Arsenic
                                                                                                  8%
             • Sites with
               Contaminated
               Fish Tissue
Figure 4-1 5.  Indicators of poor water/sediment quality that co-occur
with poor benthic condition in southeastern estuaries (U.S. EPA/EMAP).
          Figure 4-16. Contaminants in edible fish tissues in sampled sites along
          the Southeast Coast (U.S. EPA/EMAP).
                                                                          National Coastal Condition Report

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Chapter 4
Southeast Coastal Condition
         Less than 0.1% of the approximately
       14,586 fish and shellfish examined from the
       region in 1995 had visible pathologies (Hyland
       et al., 1998) (Table 4-1). Growths, ulcerations,
       and fin rot were observed in 0.2% of fish, with
       white perch showing the highest incidence
       (3.4%). Shellfish showed shell disease in
       0.2% of blue crabs and cotton disease in
       0.07% of white and brown shrimp.
         In summary, available data show that about
       54% of southeastern estuaries are in good
       condition. The remaining 46% are showing
       some signs of environmental stress, although
       no obvious connections between adverse
       biological and exposure conditions related to
       human activities could be detected throughout
       much of this area. For example, co-occurrences
                                               of degraded benthos and adverse exposure
                                               conditions (high sediment contamination
                                               in excess of sediment bioeffects guidelines
                                               and/or significant sediment toxicity based
                                               on standard assays) were much less extensive,
                                               occurring in only about 12% of the total area
                                               of these estuaries. While the  overall level
                                               of degradation in southeastern estuaries
                                               is moderate, it occurred frequently enough,
                                               with respect to spatial extent and number
                                               of indicators, that condition should be
                                               measured periodically to ensure that
                                               increasing degradation does  not occur.
                                               Programs like the Coastal 2000 Program
                                               implemented throughout North Carolina,
                                               South Carolina, Georgia, and Florida will
                                               provide this continuing surveillance.
                                              Table 4-1. Number of Fish and Shellfish with Gross Pathologies
                                              in Southeastern Estuaries
                                              Species
                                                   Number   Number    Percent     Standard
                                                       of         of        with      Error of
                                                  Pathologies    Fish    Pathologies   Estimate
                                              Atlantic Croaker
                                              White Perch
                                              Spadefish
                                                       I
3,564
0.03
                                                                  146
           3.40
                                                                   74
            1.40
                                                                             483
                                                                           0.20
                                                                           3,390
                                                                           0.10
                                                                             543
                                                                           0.20
0.01
            0.10
            0.30
                       0.03
                       0.01
                       0.02
                                                                             The dusky flounder
                                                                             (Syadum papilbsurri) is
                                                                             usually left unnoticed buried
                                                                             and camouflaged by sand
                                                                             (Photo: Dean De Philipo/
                                                                             Passage Productions).
      National Coastal Condition Report

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                                                                   Chapter 4    Southeast Coastal Condition
Assessments and Advisories

Clean Water Act  Section 305(b)
and 303(d) Assessments
  The states on the Southeast Coast assessed
5,616 (63%) of their 8,956 estuarine square
miles for their 1998 305(b) reports. Of the
assessed estuarine waters on the Southeast
Coast, 74% fully support their designated uses,
4% are threatened for one or more uses, and
the remaining 22% are impaired by some
form of pollution or habitat degradation
(Figure 4-17). Individual use support for
assessed estuaries is shown in Figure 4-18. The
states on the Southeast Coast did not assess
          Fully
        Supporting
          74%
                            Impaired
                              22%
Threatened
   4%
    Figure 4-17. Water quality in assessed estuaries on
    the Southeast Coast (U.S. EPA).
                     any of their 9,070 shoreline miles. Although
                     Florida reports water quality information for
                     coastal waters for 305(b), it is not possible
                     from that report to distinguish between
                     Atlantic Coast and Gulf Coast listings. So
                     305(b) assessment information for Florida
                     is included in its entirety in this section.
                       Table 4-2 shows individual use support
                     reported by states for their assessed estuarine
                     and coastal waters.
                      Table 4-2. Individual Use Support for Assessed Coastal
                      Waters Reported by States on the Southeast Coast
                      under Section 305(b) of the Clean Water Act

                      Individual
                      Uses
                                                      Aquatic Life
Fish
Consumption
                                                      Shellfish
                                                      Harvesting
                                                      Swimming
                      Secondary
                      Contact
                 Estuaries
                Assessed as
               Impaired (mi2)
                                         504
                                                                         340
                                         874
                                         361
                                                                         333
Percent of
Total Area
Assessed
                                  30%
   29%
                                  34%
                                  22%
                                  23%
        u-
1 ,600 -

1 ,400 -
1 200 -
1 ,000 -
800-
600-
400-
200-
o-
L~H Fully Supporting
L~H Threatened
LTI Impaired









i









—






















i i





i — i

Aquatic Life Fish Shellfishing Primary









i — i
i
Secondary
Support Consumption Contact - Contact
Swimming
                                           Designated Use

     Figure 4-18. Individual use support for assessed estuaries on the Southeast Coast (U.S. EPA).
                                                                     National Coastal Condition Report

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Chapter 4
Southeast Coastal Condition
          There are 134 waters on the Southeast
       Coast that are listed as impaired under Section
       303(d)  of the Clean Water Act. The percentage
       of listed waters impaired by each of the major
       pollutant categories is shown in Figure 4-19.
                                1998 303(d) Impairments
                                for the Southeast Coast
•4V
*7 Pesticides
Mercury
Toxics/Organics
Toxics/Metals/
Inorganics
Pathogens
Nutrients
Sedimentation
0%

0%
2%
]s%
3%
0%
|88%





                                      0    SO   100
                                      Percent of Listed
                                       Miles Impaired
    Figure 4-19. 303(d) listed waters on the Southeast Coast and the
    percentage of listed waters impaired by the major pollutant categories
    (note that a listing may be impaired by multiple pollutants) (U.S. EPA).
       State  Fish Consumption Advisories
          Eight fish consumption advisories were
       active in the coastal waters of the Southeast
       in 2000 (Figure 4-20). All four coastal states
       had statewide advisories covering all coastal
       waters  and estuaries to warn citizens against
       consuming large quantities of king mackerel
       because of potential mercury contamination.
       Because of these statewide advisories, 100%
       of the total coastline miles of the Southeast
       were under advisory.
          The following species were under advisory for at least some
          portion of the Southeast Coast during 2000:
Spotted sea trout
Largemouth bass
Atlantic croaker
Red drum
Black drum
Mussels
Silver perch
Jack crevalle
Flounder
Ladyfish
Clams
Blue crab
Oysters
King mackerel

                                                    The majority of fish consumption
                                                  advisories on the Southeast Coast (64%)
                                                  were the result of mercury contamination
                                                  (Figure 4-21). Advisories were only issued
                                                  for two other pollutants, PCBs and dioxins.
                                                  All PCB advisories were in Georgia, and the
                                                  one dioxin advisory was in North Carolina's
                                                  Albemarle Sound.
                                                                                               Albemarle
                                                                                               Sound
                                                                              Number of
                                                                              Advisories per
                                                                              USGS Cataloging
                                                                              Unit


                                                                              |   | 2-4

                                                                                  No Advisories
                                                                                       Indian River
                                                                                       Lagoon
                                                Figure 4-20. The number offish consumption advisories per
                                                USGS Cataloging Unit in southeastern coastal waters. These data
                                                are for 2000 (U.S. EPA NLFWA, 2000c).
                                                                           Dioxins
                                                                             9%
                                                        Mercury
                                                          64%
                                                     Figure 4-21.  Pollutants responsible for fish
                                                     consumption advisories in coastal waters of
                                                     the Southeast (percent of 2000 advisories issued
                                                     for each pollutant) (U.S. EPA NLFWA, 2000c).
      National Coastal Condition Report

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                                                                    Chapter 4    Southeast Coastal Condition
Classified  Shellfish-Growing Waters
  Shellfishing plays an important role in
the ecology and economy of southeastern
states. In the Southeast, 3.9 million acres
were classified for shellfish harvest in 1995.
Of these, 71% of waters were approved, 16%
were harvest-limited, and 13% were unclassi-
fied (Figure 4-22). Nationally, the Southeast
Coast ranks second in the percentage of
approved waters. Of the classified acreage,
64% is located in estuarine waters and 36% in
nonestuarine waters. The top three pollution
sources affecting harvest limitation are wild-
life, urban runoff, and agricultural runoff.
                      Prohibited 13%
    Approved
      71%
                           Unclassified 13%
Restricted < I %
Conditionally
Approved 2%
            Fair
                  Poor
   Figure 4-22. Classification of shellfish-growing
   waters for the Southeast (1995 Shellfish Register;
   NOAA, 1997).

   The top two shellfish species (rated high
or medium in abundance) in the Southeast
are hard clams (463,711 acres) and eastern
oysters (417,483 acres). Hard clams and
eastern oysters are found at high or medium
relative abundance in 11% of the region's
shellfish-growing waters. Nine percent
(43,179 acres) of hard clams and 27%
(111,327 acres) of eastern oysters are located
in waters that do not allow direct harvesting
(i.e., restricted, conditionally restricted,
and/or prohibited).
Beach Closures
  A total of 127 beaches in the Southeast
reported information to EPA's BEACH
Program on beach monitoring activities
and beach closings during 1999. The only
beach closings reported on the Southeast
Coast (seven beaches) occurred in Florida
(Figure 4-23). All of the reported beach
closures resulted from elevated bacteria levels
due to storm water runoff, pipeline breaks,
and boat discharges.
  All of the beaches reporting information
in North Carolina, South Carolina, and
Georgia had monitoring programs in 1999.
However, only 61% of beaches reporting from
the east coast of Florida had monitoring in
place for bacteria levels. None of the beaches
in Georgia contributed information to the
EPA survey because the state did not have
a monitoring or beach closure program;
however, Georgia began a monitoring
program in 1999  and reported monitoring
information from four beaches.

                                                       Percentage of
                                                       beaches closed
                                                        per county:
                                                       []  0-10
                                                       ^\  11-50
                                                        |  51-100
                                                       •  No Data
                                                       —  Available
                                                       ~)  Beach Closure
                                                          in 1999
                                                      Figure 4-23. The only beach closings in 1999 reported
                                                      to EPA for the Southeast Coast occurred in Florida. Other
                                                      closings may have occurred but were not reported to EPA.
                                                                      National Coastal Condition Report

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        Eutrophication  Studies in
        the  Neuse River Estuary
                                                  Neuse Hiver Estu^rv
                                                                    •-.-".' I
                                                                           MO DM0 N
  The Neuse River Estuary is home to some
of North Carolina's most economically valuable
commercial and recreational fish and shellfish, in addition to being a highly valued
recreational and industrial resource. However, the slow-flowing waters of the estuary
provide near perfect conditions for algal blooms and eutrophication when combined
with the increased nitrogen loading that has taken place in the last 3 to 4 decades.
Recently, the state legislature mandated a 30% reduction in nitrogen loading to
reduce the unwanted symptoms of eutrophication (nuisance algal blooms, hypoxia,
fish kills). Because it is often difficult to predict or identify the effects of water
quality management decisions, the plan to reduce nitrogen loading by 30%
has created an opportunity for scientists to conduct a large-scale experiment
using data collected before, during, and (eventually) after the reduction.
  The multidisciplinary Neuse Modeling and Monitoring (MODMON) project
was designed to collect monitoring data to establish the status and trends of water,
sediment, and habitat quality in the estuary. Another aspect of MODMON was to
create short-term and long-term water quality models such as the Neuse Estuary
Eutrophication Model (see figure). Results of different model scenarios can be
found on the Internet: http://www.marine.unc.edu/neuse/modmon.
            Rivers, Creeks,
            Groundwater      Atmosphere     Pamlico Sound
                                                             Neuse
                                                             Estuary
                                                             Eutrophication
                                                             Model
        This model simulates the processes used to predict water quality in the Neuse River for various nutrient
        loading and hydrologic scenarios.
National Coastal Condition Report

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                                                         Chapter 4   Southeast Coastal Condition
South Carolina  Estuarine
and  Coastal Assessment Program

  In 1999, the South Carolina Department of Natural Resources (SCDNR) and
the South Carolina Department of Health and Environmental Control (SCDHEC)
initiated a major new collaborative coastal monitoring program. The goal of the
South Carolina Estuarine and Coastal Assessment Program (SCECAP) is to monitor
the condition of the state's estuarine habitats and associated biological resources
annually. This program significantly expands current ongoing monitoring efforts
being conducted by SCDNR and SCDHEC by drawing upon the expertise of both
in a cooperative effort. SCECAP integrates measures of water and sediment quality
with multiple measures of biological condition at a large number of sites throughout
the state's coastal zone. It also expands historical monitoring activities that have
focused primarily on open water habitats (e.g., bays, sounds, tidal rivers) to include
an assessment of conditions in tidal creeks, which serve as important nursery habitat
for most of the state's economically valuable species (see figure). Many of these tidal
creeks are also the first point of entry for nonpoint source runoff from upland areas
and, therefore, can provide an early indication of anthropogenic stress.
                                            SCECAP Stations
                                                1999
                                            Station Locations
                                              • Creek
                                              OOpen
                    Sampling sites for SCECAP in 1999.
                                                          National Coastal Condition Report

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Chapter 4
Southeast Coastal Condition
      Summary
                            Ecological conditions in southeastern estuaries
                          are fair (Figure 4-24). The primary problem in
                          southeastern estuaries in the 1990s has been wetland
                          loss and sediment contamination. Sediment contam-
                          ination received a rating of fair, with high levels of
                          contaminants being detected over moderate areas,
                          but with additional low-level contamination detected
                          over broader areas (particularly for pesticides and
                          metals). Resulting health of resident benthic fauna
                          was considered fair, with evidence of impaired benthic
                          assemblages detected in about 17% of these estuaries.
                          Wetland losses in the Southeast are substantial and
                          receive a fair rating. Dissolved oxygen conditions
                          are considered good and the condition of fish is
                          also considered good, based on the low occurrence of
                          contaminated tissues in fish sampled in southeastern
                          estuaries. Increasing population pressures in this region
                          of the country will require additional programs and
                          increasing environmental awareness in order to correct
                          existing problems and ensure that indicators that
                          appear to be in fair condition do not worsen.
                           Overall J~1
                          Southeast^  7
                             ood  Fair
                            Poor |
                                Water Clarity
                                Dissolved Oxygen
                                Coastal Wetlands
                                Eutrophic Condition
                                Sediment
                                Benthos
                                Fish Tissue
                          Figure 4-24. Ecological conditions in southeastern
                          estuaries are fain
      National Coastal Condition  Report

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Chapter
        Gulf of
        Mexico
        Coastal
        Condition

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Chapter 5
            Gulf of Mexico
            Coastal  Condition
                                                   The  overall
                                                   condition  of
                                                   Gulf Coast
The Florida Keys National Marine Sanctuary is visited by several marine mammal
species, including the endangered West Indian manatee (Photo: Laurel Canty-Ehrlich).
                                      estuaries is fair to poor
                                      (Figure 5-1). From 1991
                                      to 1995, EMAP collected
                                      environmental stressor
                                      and response data from
                                      500 locations from
                                      Florida Bay, Florida, to
                                      Laguna Madre, Texas.
                                      Fifty-one percent of the
                                      assessed estuaries of the
                                      Gulf of Mexico were in
good ecological condition, meaning that, in the most stressful period of
the year, neither environmental stressors (nutrients, contaminants, etc.)
nor aquatic life communities showed any signs of degradation
(Figure 5-2). Another 37% showed indications of poor aquatic life
conditions and 27% were impaired for human uses.
  Gulf of Mexico estuaries (Figure 5-3) provide critical feeding, spawning,
and nursery habitats for a rich assemblage of fish, wildlife, and plant
species. Hundreds of species of birds, recreational and commercial fish
and shellfish species, native cypress and mangroves, and threatened and
endangered species such as sea turtles, Gulf sturgeon, beach mice,  and
manatees can be found in Gulf estuary habitats. These estuaries support
  National Coastal Condition Report

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      The Florida Keys National Marine Sanctuary encompasses over
      2,800 square nautical miles of ocean waters from the mangroves
      and beaches of the Keys all the way out to the deep ocean.The
      Sanctuary is home to a wide diversity of organisms and serves
      as a resting place for migrating animals at different times of the
      yean The hawksbill turtle (Eretmoche/ys imbricata), an endangered
      species, can occasionally be seen on the reefs of the Keys resting
      or feeding on sponges and jellyfish (Photo: Jerry Burcham).
                                                                  Chapter 5
                                                                      Gulf of Mexico Coastal Condition
      Overall
        Gulf
          Fair
                Poo
Water Clarity
Dissolved Oxygen
Coastal Wetlands
Eutrophic Condition
Sediment
Benthos
Fish Tissue
                          Figure 5-1.
                          The overall condition
                          of Gulf of Mexico
                          coastal resources
                          is fair to poor
                  Impaired Human and
                    Aquatic Life Use
                          15%
  Unimpaired
     51%
                      Impaired Aquatic
                          Life Use
                           22%
  Good
          Fair
                Poor
                  Impaired
                 Human Use
                    12%
Figure 5-2. The condition of estuaries on the Gulf of
Mexico Coast; estimates +6/6 based on 5 years of sampling
(U.S. EPA/EMAP).
Figure 5-3. Gulf of Mexico estuaries.
submerged aquatic vegetation communities
that stabilize shorelines from erosion, reduce
nonpoint source loadings, improve water
clarity, and provide habitat.
  The population of coastal counties along
the Gulf Coast increased 52% between 1970
and 1990 (U.S. Bureau of the Census, 1996).
Despite the increasing human impacts on the
Gulf Coast, relatively little attention has been
focused on the environmental concerns of
the Gulf of Mexico estuaries or upon the
condition of its estuarine resources. EMAP
focused its coastal monitoring efforts on the
Gulf of Mexico estuaries from 1991 to 1999
(Macauley et al., 1999; U.S. EPA, 1999). The
Joint Gulf States Comprehensive Monitoring
Program (GMP, 2000) began in 2000 in
conjunction with EPA's Coastal 2000 Program.
In addition, since the late 1980s, NOAAs
NS&T Program has collected contaminant
bioavailability and sediment toxicity data
from several Gulf of Mexico locations (Long
etal., 1996).

                                                                       National Coastal Condition Report

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Chapter 5   Gulf of Mexico Coastal Condition
       Coastal Monitoring Data
            Water Clarity
         Water clarity in Gulf Coast estuaries
       is fair. Water clarity was estimated by light
       penetration through the water column. For
       approximately 22% of the waters in Gulf
       of Mexico estuaries, less than 10% of surface
       light penetrated to a depth of 1 meter
       (Figure 5-4).
             Dissolved Oxygen
         Dissolved oxygen conditions in Gulf Coast
       estuaries are generally good, except in a few
       highly eutrophic regions. EMAP estimates for
       Gulf of Mexico estuaries show that about 4%
       of the bottom waters in the Gulf estuaries have
       hypoxic conditions or low dissolved oxygen
       (<2 ppm) on a continuing basis in late
       summer (Figure 5-5). These areas are largely
       associated with Chandeleur and Breton
       Sounds in Louisiana, some shoreline regions
       of Lake Pontchartrain, northern Florida Bay,
       and small estuaries associated with Galveston
       Bay, Mobile Bay, Mississippi Sound, and the
       Florida panhandle.
         While hypoxia resulting from anthropo-
       genic activities is a relatively local occurrence
       in Gulf of Mexico estuaries, accounting for less
       than 5% of the estuarine bottom waters, the
       occurrence of hypoxia in the Gulf's shelf waters
       is much more significant (Figure 5-6). The Gulf
       of Mexico hypoxic zone is the largest zone of
       anthropogenic, or human-caused, coastal
       hypoxia in the Western Hemisphere (CAST,
       1999). Since 1993, midsummer bottom water
       hypoxia in the northern Gulf of Mexico has
       been larger than 3,861 square miles, and in
       1999, it reached 7,722 square miles (CENR,
       2000) (Figure 5-7). This hypoxia occurs in
                                                               Water Clarity
                                                               Gulf Coast
Figure 5-4. Light penetration data and locations for sites with < 10%
light penetration along the Gulf Coast (U.S. EPA/EMAP).
         Dissolved Oxygen
         Gulf Coast
                 Good
                        Fair
                              Poor
                                                     Figure 5-5. Dissolved oxygen data and locations for sites with less than
                                                     2 ppm for the Gulf Coast (U.S. EPA/EMAP).
      National Coastal Condition Report

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                                                                 Chapter 5
                        Gulf of Mexico Coastal Condition
     Source: Rabalais et al., 1999
Figure 5-6. Mississippi-Atchafalaya River Basin and Gulf of
Mexico hypoxic zone.
1 15,000
i>
£
0
2 10,000
51
1 5,000
oo

n




— ,









—












rt
Q
0
_i — i ^
, — ,









—





















-

















-

















n

















n

















	

















	















        '85 '86 '87 '88 '89 '90 '91 '92 '93 '94 '95 '96 '97 '98 '99
                        Year

Figure 5-7. Areal extent of mid-summer hypoxia in the Gulf
of Mexico (1985-1999) (CENR, 2000).
 the Gulf of Mexico waters receiving flow from
 the Mississippi-Atchafalaya River Basin and
 results from (1) nutrients delivered from
 the watershed that foster large-scale phyto-
 plankton production in shelf waters or (2)
 decomposition of organic material delivered
 from that watershed. Sediment cores from
 the hypoxic zone show that shelf algal repro-
 duction was significantly lower in the first
 half of the 20th century, suggesting that
 anthropogenic changes to the basin and its
 discharges have resulted in the increased
 hypoxia  (CENR, 2000).
    Since  1980, the basins providing discharge
 to this portion of the Louisiana shelf have
 averaged nearly 2 million tons of nitrogen
to the Gulf annually. Increases have been
observed since the 1950s, primarily of nitrate
nitrogen with total nitrate flux tripling from
the 1960s and 1970s to the 1980s and 1990s.
Over half of the nitrogen load comes from
nonpoint sources north of the confluence
of the Ohio and Mississippi Rivers, with much
of the loading coming from the drainage of
agricultural lands (CENR, 2000). Gulf of
Mexico ecosystems and fisheries are affected
by the widespread hypoxia. Mobile organisms
leave the hypoxic zone  for more oxygen-
rich waters, and those that cannot leave
frequently die.
  Estimates of Gulf of Mexico hypoxia have
not been included in the estimates of Gulf
estuarine hypoxia. Thus, a determination of
a low proportion of estuarine bottom waters
having hypoxic conditions and, consequently,
a "good" rating in estuaries for dissolved
oxygen should not be indicative of offshore
conditions. Using similar standards (similar
to those for estuarine waters), Gulf of Mexico
shelf bottom waters would be rated "poor"
for dissolved oxygen conditions.
  Much of this discussion of Gulf hypoxia
is taken from six science topic reports and
an integrated scientific assessment of Gulf
of Mexico hypoxia produced by the National
Science and Technology Council Committee
on Environment and Natural Resources
(CENR, 2000). The six  topic reports under-
went rigorous peer review with oversight by
an independent editorial board. The report,
integrated assessment, and the comments are
available on the Internet at http://www.nos.
noaa.gov/products/pubs_hypox.html. The
Council for Agricultural Science and
Technology (CAST) also produced a report

                                                                      National Coastal Condition Report

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Chapter 5   Gulf of Mexico Coastal Condition
        that provides recommendations to help better
        understand all aspects of hypoxia in the Gulf
        of Mexico and to decrease the Gulf hypoxic
        zone. This report is available on the Internet
        at http://www.cast-science.org/castpubs.htm.
        Specific action to address this  environmental
        issue is highlighted in this chapter.
              Coastal Wetland Loss
          The coastal wetlands indicator for the Gulf
        of Mexico receives a score of poor. Wetland
        losses along the Gulf of Mexico from the
        1780s to 1980s are among the highest in the
        nation (Figure 5-8). Losses over the 200-year

          Coastal Wetland Habitat Loss from 1780 to 1980

       o 100
CO
o
ON
o
-U
o
nt

K»
o
46
-

SO


59


46


SO

Florida Alabama Missis- Louisiana Texas
sippi
SO
1
Gulf of
Mexico
      Figure 5-8. Percent wetland habitat loss from 1780 to 1980 by
      state and for the Gulf of Mexico region overall (Dahl, 1990;Turner
      and Boesch, 1988).

        timespan were 50% throughout the Gulf
        and ranged from 46% declines in Florida
        and Louisiana (although the absolute losses in
        these states were the highest) to a 59% decline
        in Mississippi. During the 1970s to 1980s, the
        Gulf lost 5% of its wetlands, with the largest
        declines seen in Texas (Figure 5-9). Not  all of
        the wetland losses in the Gulf of Mexico are
        due to coastal development. Sea-level rise,
        coastal subsidence, and interference with
        normal erosional/depositional processes
        also contribute to wetland loss.
 The red mangrove (Rhizophora mangle), the colonizing
 mangrove, is the largest of the mangroves and is usually
 the first tree found when coming ashore in the Florida Keys.
 The red mangrove has prop roots often characterized as
 "walking" roots due to their resemblance to a person's legs
 while walking. The black mangrove (Av/cenn/o germinanas)
 is found upland of the red mangrove. This tree has
 pneumataphores, aerial roots that resemble limbs growing
 upwards, that assist the tree in obtaining oxygen in its
 anaerobic substrate. The white mangrove (Laguncularia
 racemoso) grows farther inland and is not continuously
 inundated with saltwater It does feel the effects of the salty
 environment though, and has two pores at the base of its
 leaves that excrete the excess salt (Photo: Florida Keys NMS).


    Coastal Wetland Habitat Loss from 1970 to 1980
 o 10
                                      11
       Florida  Alabama
                     Missis-  Louisiana  Texas
                      sippi
Gulf of
Mexico
Figure 5-9.  Percent decline in acreage of wetlands from the
1970s to  1980s by state and for the Gulf of Mexico region overall
(Hefner et al., 1994).
       National Coastal Condition Report

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                                                                       Chapter 5
                           Gulf of Mexico Coastal Condition
       Eutrophic Condition
   The condition of Gulf Coast estuaries as
measured by eutrophic condition is poor.
Expression of eutrophic condition was high in
38% of the area in Gulf estuaries (Figure 5-10).
The symptoms of eutrophic condition are
expected to increase in over half of Gulf of
Mexico estuaries by 2020.
   High expressions of chlorophyll a were
determined for about 30% of the estuarine
area of the Gulf of Mexico. The areas with
high chlorophyll a were largely in Louisiana,
Laguna Madre, Tampa Bay,  and Charlotte
Harbor (Figure 5-11).
   One area worthy of discussion is Florida
Bay, which has a high eutrophic condition but
low chlorophyll a. Concentrations of about
50 ^g/L were used to classify an estuary as
having a  high concentration of chlorophyll a.
Chlorophyll a concentrations in Florida Bay
as low as 20 ^g/L have been shown to be
potentially eutrophic due to the physical,
chemical, and ecological dynamics of
that system.
Scientists from other local, state, regional, and national
governmental resource protection agencies, universities, and
nongovernment organizations conduct much of the research
in the Florida Keys National Marine Sanctuary In this picture,
photomonitoring of the corals is being done as part of a long-
term monitoring program used to indicate changes and trends
in the health of the coral reef (Photo: Mike White, Florida
Keys NMS).
           Eutrophic
       SI  Condition
           Gulf Coast
                                     • High Expression
                                       of Eutrophic
                                       Condition
               Moderate
                 33%
Figure 5-10.  Eutrophic condition data and locations of estuaries with
high expression eutrophic condition along the Gulf Coast (NOAA/NOS).
  Expression of Chlorophyll a
  Gulf Coast

                                                                   Sites with High
                                                                   Expression of
                                                                   Chlorophyll a
 High Expression = generally high
 chlorophyll a concentrations over a
 large spatial area and/or over a long
 period of time.
 Moderate to Low Expression =
 generally lower concentrations of
 chlorophyll a over smaller areas or
 for a shorter period of time.
 Moderate to
Low Expression
     70%
Figure 5-11.  Chlorophyll a data in surveyed estuaries along the Gulf
Coast and locations of estuaries with high expressions of chlorophyll a
(NOAA/NOS).


                     National Coastal Condition Report

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Mississippi
          Liver
        A  National  Strategy To Address
        Hypoxia in  the Gulf of Mexico
          The best current science indicates that excessive
        nutrient input, particularly nitrogen, from the
        31-state Mississippi/Atchafalaya River Basin
        contributes to the annual formation of a hypoxic
        zone in the northern Gulf of Mexico. This low-
        oxygen condition, which threatens the vast
        ecological habitat, has averaged about 5,405 square
        miles over the past 5 years  (1995-2000). Detailed information on the size of the
        hypoxic zone and nitrogen inputs from almost two-thirds of the United States is
        presented in this chapter. Concern over the environmental and economic impacts
        of this annual event has led to a national effort to assess and address the causes and
        solutions for reducing its adverse effects.
          In 1998, Congress passed the Harmful Algal Bloom and Hypoxia Research and
        Control Act, which contained specific requirements for addressing Gulf of Mexico
        hypoxia. The first requirement was to produce an integrated assessment of causes
        and consequences, and the second was to produce a plan of action to reduce,
        mitigate, and control hypoxia. As a result of this legislation, NOAA, as directed
        by the National Science and Technology Council, led a scientific assessment team
        to investigate the causes and effects of the hypoxic zone as well as approaches for
        reducing its size and consequences. Teams with experts from within and outside the
        government developed and produced six interrelated, peer-reviewed reports that
        became the foundation for the overall integrated assessment published in May 2000.
                            T
National Coastal Condition Report

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                                                         Chapter 5   Gulf of Mexico Coastal Condition
  To fulfill the second requirement, the National Science and Technology Council
requested that an existing group, the Mississippi River/Gulf of Mexico Watershed
Nutrient Task Force, lead the effort for developing the plan of action. EPA provided
leadership for this Task Force, which included senior management members from
9 states, 2 tribes, and  10 federal agencies. Using the information provided in the
scientific assessment along with other supplemental information, the Task Force
produced a draft action plan that is available on the Internet at
http://www.epa.gov/msbasin/fr-actionplan.html).
  Following an October 2000 meeting in Baton Rogue, Louisiana, the Task Force
finalized the action plan for delivery to the White House and ultimately to Congress.
The final action plan  includes a coastal goal  for reducing the 5-year running average
areal extent of the Gulf of Mexico hypoxia to less than 1,930  square miles by the year
2015. This will be accomplished through implementation of specific, practical, and
cost-effective voluntary actions by all partners within the Basin aimed at achieving a
30% reduction (from the average discharge in the 1980-1996 time frame) in nitrogen
discharges to the Gulf. Approaches for accomplishing the reductions include
creating and restoring wetlands, increasing the efficiency of agricultural and urban
non-point-source nutrient management practices, upgrading sewage treatment
facilities for nitrogen  removal, and continuing research and monitoring efforts
within the Mississippi River Basin and the Gulf of Mexico. These efforts will all
contribute to overall improved water quality within the Mississippi River Basin
and reduction of the hypoxic condition in the Gulf of Mexico.


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Chapter 5   Gulf of Mexico Coastal Condition
             Sediment Contaminants
         The condition of Gulf Coast estuaries as
       measured by sediment contaminants is poor.
       Sediment contaminant concentrations were
       rarely observed at greater than ERM guidelines
       (Long et al., 1996), but northern Galveston
       Bay and the Brazos River in Texas showed
       high sediment contaminant concentrations.
       EMAP reported that ERL guidelines were
       exceeded for all of the major groups of
       sediment contaminants, albeit at very low
       rates (less than 1% of area) for PAHs and
       PCBs  (Figure 5-12). There are greater ERL
       exceedances for pesticides (43%) and heavy
       metals (32%), although most of the pesticide
       ERL exceedances are for dieldrin and  endrin
       (both  pesticides have ERL levels approxi-
       mating their detection limits). The next
       pesticides with the largest areal exceedances of
       their ERL values are DDT (a chemical banned
       since 1972) at 12% and chlordane at 4%.
         However, while concentrations of all
       sediment contaminants are relatively low,
       enrichment rates for Gulf of Mexico estuarine
       sediments  range from 34% (heavy metals) to
       nearly 99% (PAHs and PCBs) (Figure 5-13).

             Sediment Contaminant Criteria
        ERM (Effects Range Medium) - The
        concentration of a contaminant that will
        result in  ecological effects approximately
        50% of the time based on literature studies.
        ERL (Effects Range Low) - The
        concentration of a contaminant that will
        result in  ecological effects about 10% of
        the time based on literature studies.
         Sediment
         Contamination
         Gulf Coast
Percent Area
K» -U ON CO O
5 O O O O O

0 5 > ERL
0 1 > ERM

_6_, |

43
32
1
             Alkanes PAHs  PCBs Pesticides Metals
Figure 5-12. Sediment contamination for sampled sites and locations of
sites with 5 > ERL or I  > ERM along the Gulf Coast. (U.S. EPA/EMAP).
on
60
40
20
n





99









99




80









34


              PAHs
                     PCBs   Pesticides   Metals
   Figure 5-13. Sediment enrichment rates in Gulf of Mexico
   estuaries.
      National Coastal Condition Report

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                 Chapter 5   Gulf of Mexico Coastal Condition
      Benthic Condition
  The condition of benthic indicators in
Gulf Coast estuaries is poor. Benthic index
estimates (Engle and Summers, 1999) based
on EMAP surveys indicate that 23% of the
estuarine area has degraded benthic resources
(Figure 5-14). Of the 9,932 mi2 in the
Louisianian Province  (Tampa Bay, Florida,
to Laguna Madre, Texas) and of the 2,054 mi2
of the West Indian Province located along the
Gulf Coast, over 4,247 mi2 were ecologically
degraded with respect to benthos. Examina-
tion of the distributions of the benthic index
in the three sampling strata within the Gulf
of Mexico (large estuaries, large rivers, and
small estuaries/rivers) showed that the
Mississippi River had the largest proportion
of its estuarine bottom area represented by
poorer than expected benthic communities
(82%), while large estuaries had the smallest
proportional representation (18%). With the
exception of the Big Bend and Ten Thousand
Islands regions of Florida, most Gulf of
Mexico estuarine regions showed some
level of benthic degradation.
  For the locations that showed poor benthic
community quality, the co-occurrence of poor
environmental quality (exposure) is shown in
Figure 5-15. Of the 23% of the Gulf of Mexico
estuarine area that had poor benthos, 70%
also showed contaminated sediments, 1%
showed sediment toxicity, 7% showed hypoxia,
and 12% showed poor light conditions (high
levels of total suspended solids). Only 10%
of the locations that showed poor benthic
community conditions had no sediment or
water quality degradation. These locations
          Benthic Index
          Gulf Coast
     Sites with Poor
     Benthic Conditions
   Fair
Condition
  28%

                    Good
                           Fair
Figure 5-14. Benthic index condition data and locations with poor
benthos along the Gulf Coast (U.S. EPA/EMAP).
  Poor Water/Sediment Quality Indicators
  that Co-Occur with Poor Benthic Condition
  Gulf Coast
             Sediment
            Contaminants
               70%
   O  None
   O  DO
   O  Sediment Contaminants
   •  Toxicity
   •  Light
Figure 5-15. Indicators of poor water/sediment quality that co-occur
with poor benthic condition in Gulf of Mexico estuaries (U.S. EPA/EMAP).
                     National Coastal Condition Report

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Chapter 5   Gulf of Mexico Coastal Condition
       were spread throughout the five Gulf
       of Mexico states, although several of these
       sites are suspected of having poor nutrient
       water quality.
         Sediment toxicity from EMAP and NOAA
       bioeffects data show that small proportions
       of Gulf of Mexico sediments are toxic (6% of
       sediments causing greater than 20% mortality
       in test organisms) (Figure 5-16). NOAA
       bioeffects surveys of Tampa Bay, Apalachicola
       Bay, St. Andrews Bay, Choctawhatchee Bay,
       Pensacola Bay, and Sabine Lake showed less
       than 1% of sediments to be toxic. EMAP
       surveys generally confirm these findings,
       although their surveys showed toxicity
       associated with Choctawhatchee River
       sediments, Bayou Texar in Pensacola Bay,
       and the Sabine Lake Canal. In addition,
       EMAP showed toxic sediments in several
    Toxic Sediments
    Ampelisca Test
    Gulf Coast
• Sites Where
Survival of
Amphipods
Was Less
Than 80%

Percent Area
100
80
60
40
20
Ampelisca Survival < 80%
Gulf Coast 1994-1995
^f]^
    Province = Entire Area
    Large  = Estuaries > 97 mi2
    Rivers  = Tidal Rivers > 97 mi2
    Small  = Estuaries < 97 mi2
Province Large  River  Small
                                  Big Bend, Florida, estuaries, lower Mississippi
                                  River and Atchafalaya River sediments,
                                  portions of Galveston Bay, western Lake
                                  Pontchartrain, as well as several other small
                                  estuarine systems in the Gulf of Mexico.
                                        Fish Tissue Contaminants
  Figure 5-16. Amphipod data and locations with toxicity > 20% along
  the Gulf Coast (U.S. EPA/EMAP).
  The condition of Gulf Coast estuaries based
on fish tissue contaminants is poor. Based on
FDA limits for 15 of the 49 contaminants
examined by EMAP, contaminant concen-
trations in edible fish and shellfish were low
for all pesticides tested. However, guidance
concentrations for metals were exceeded in all
species examined. Concentrations of arsenic,
chromium, copper, and selenium exceeded
guidance values for 4% of shrimp, 9% of
Atlantic croaker, and 32% of catfish. An
estimated 20% of fish examined contained
concentrations of metals exceeding guidance
criteria (Figure 5-17), although 80% of these
exceedances were for arsenic (16% offish
examined). Arsenic found in fish and shellfish
is almost completely altered into organic
arsenobetaines that are not toxic to humans.
Thus, only about 4% of fish examined showed
elevated levels of contaminants, with about
3% of catfish, 4% of shrimp, and 5% of
croakers (Figure 5-18) showing elevated
concentrations in edible tissues.
  Less than 1% of the approximately
64,100 fish examined from the region had
visible pathologies (Fournie et al., 1996)
(Table 5-1). External pathologies were
prevalent in upper trophic level fish (e.g.,
sea trout and permit) (1%), while demersal
species exhibited an incidence of external
pathologies in about 0.5% of the fish
      National Coastal Condition Report

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                                                                  Chapter 5
                                                                                 Gulf of Mexico Coastal Condition
      Edible Fish Tissue
      Contaminants
      Gulf Coast
                                                                 Edible Fish Tissue
                                                                 Contaminants
                                                                 Gulf Coast
       Sites with
       Contaminated
       Fish Tissue
                                                                 Sites with
                                                                 Contaminated
                                                                 Fish Tissue
  All Other
Contaminants
    4%
             No
        Contaminants
            80%
Figure 5-17. Contaminants in fish tissue, including arsenic
(U.S. EPA/EMAP).

                                                                       Catfish   Shrimp  Croaker


                                                   Figure 5-18. Contaminants in fish tissue, not including arsenic
                                                   (U.S. EPA/EMAP).
examined. The estimation error associated
with these percentages is about 0.0001%.

  In summary, ecological conditions in the
Gulf of Mexico show that about 50% of
estuaries are in good condition. The remaining
50% are showing some signs of degradation;
however, these signs are generally being seen
in benthic communities and often represent
chronic effects (e.g., changes in biodiversity
and community structure) due to prolonged
exposures to low levels  of contaminants,
increasing nutrients, and habitat degradation.
While the level of estuarine degradation in
Gulf of Mexico estuaries is low, it occurs
relatively frequently and must be measured
periodically to ensure that increasing
Table 5-1 . Number of Fish with Gross Pathologies in Gulf of Mexico
Estuaries
Group
Demersal
Upper Trophic
Commercial/
Recreational
Pelagic
Number
of
Pathologies
198
43
151
163
Number
of
Fish
44,781
4,179
14,217
1 3,299
Percent
with
Pathologies
0.442
1.028
1.062
1.225
Standard
Error of
Estimate
0.000
0.002
0.000
0.000
                                                        degradation does not occur. Programs like the
                                                        Joint Gulf States Comprehensive Monitoring
                                                        Program jointly sponsored by the Gulf of
                                                        Mexico states and EPA's Gulf of Mexico
                                                        Program and Coastal 2000 will provide
                                                        this continuing surveillance.
                                                                       National Coastal Condition Report

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         Lake Pontchartrain, Louisiana's
         Troubled Urban Estuary

           Concentrated rapid population growth in the area between Lake Pontchartrain
         and the Mississippi River began nearly 300 years ago with the influx of European
         settlers. Development and urbanization in the New Orleans area is projected to
         continue and place even greater stress on the Pontchartrain Basin environment.
         Today, the Basin faces many challenges, including continued loss of wetlands and
         estuarine habitats, pollution of water and sediments, and potential impacts on the
         circulation patterns of Lake Pontchartrain from future freshwater diversions from
         the Mississippi River. The U.S. Geological Survey conducts a number of long-term
         studies in Lake Pontchartrain to provide scientific information to help managers
         and planners deal with these environmental challenges.
           The opening of the Bonnet Carre'Spillway, which connects the Mississippi River
         to Lake Pontchartrain, serves as one example of the human-induced environmental
         challenges in the estuary. In March 1997, the Spillway was opened to help divert
         flood waters from the Mississippi into Lake Pontchartrain. Satellite imagery revealed
         an increase in suspended material in the lake as a result of the diversion of flood-
         waters. Below are images derived from the Advanced Very High Resolution
         Radiometer (AVHRR) instrument onboard National Oceanic and Atmospheric
         Administration polar-orbiting satellites. The images illustrate the increase in
         suspended material in the lake as a result of the diversion of floodwaters. Dark
         red indicates more suspended sediment.
                March 6,1997
March 23,1997
April 7,1997
National Coastal Condition Report

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                                                       Chapter 5  Gulf of Mexico Coastal Condition
Seagrass Meadows
in  Laguna Mad re
  Laguna Madre is a very shallow, naturally
hypersaline (saltier than seawater) coastal
body of water located in southern Texas
near the Mexican border (see map). It covers
over 600 square miles and averages only
2.5 feet in depth, but the deepest areas are
over 5 feet deep. Seagrasses currently cover
over 70% of both the upper and lower
Laguna Madre. However, dramatic changes
are taking place in the coverage and species
composition of the seagrass communities.
                        Corpus Christi Bay

                      Upper Laguna Bay
             The Texas coast.
             N
                 1988
       I   I Bare
       I   I Shoal Grass
       I   I Manatee Grass
       ^H Clover Grass
       I   I Turtle Grass
         ns Not Sampled


Increased turbidity and changes
in salinity are leading to dramatic
changes in the seagrass meadows
of the lower Laguna Madre
(Onuf, 1995).
  The upper Laguna Madre saw large increases
in seagrass coverage from 1967 to 1988. Since 1988,
seagrass meadows have been declining, particularly
in the deeper areas of the lagoon. Current research
suggests that recent declines are due to a persistent
bloom of the phytoplankton Aureoumbra lagunensis
(Texas brown tide). The bloom reduces water clarity
and results in shading of deeper seagrasses, which
are then unable to survive.
  Seagrass coverage in the lower Laguna Madre is
also declining, and species  composition is  changing
rapidly. Historically, shoal grass (Halodule wrightii)
dominated seagrass meadows in Laguna Madre.
These meadows serve as overwintering grounds
for redhead ducks (Aythya americana) that feed on
shoal grass during the winter months. Since 1988,
however, shoal grass coverage has been reduced 60%
(left). Bare areas in the lagoon are increasing and
shoal grasses are being replaced by manatee grass
(Syringodium filiforme) and turtle grass (Thalassia
testudinum). While declines appear largely due to
brown tides, sediments suspended by maintenance
dredging may have also contributed to reducing the
amount of light reaching seagrasses and damaging
the meadows.


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Chapter 5   Gulf of Mexico Coastal Condition
       Assessments and Advisories

       Clean Water Act Section 305(b)
       and 303(d)  Assessments
         Gulf Coast states assessed 7,276 (48%)
       of the 15,316 square miles that make up the
       Gulf Coast estuaries for their 1998 305(b)
       reports. Although Florida reports water quality
       information for coastal waters for 305(b), it
       is not possible from that report to distinguish
       between Atlantic Coast and Gulf Coast
       listings, so 305(b) assessment information
       for Florida is included in its entirety in this
       section. Thirty-two percent of the assessed
       estuarine waters on the Gulf Coast fully
       support their designated uses, and 6% are
       threatened for one or more uses (Figure 5-19).
       The remaining 62% of assessed estuarine
       waters on the Gulf Coast are impaired by
       some form of pollution or habitat degradation.
       Individual use support for estuaries  is shown
       in Figure 5-20.
                    Of the 2.5 million visitors to the Florida Keys each yean 17% participate
                    in some type of fishing activity during their visit (Photo: Page Guill,
                    Florida Keys NMS).
                          Fully
                        Supporting
                          32%
                          Threatened
                             6%
                                               Impaired
                                                 62%
                    Figure 5-19. Water quality in assessed Gulf Coast
                    estuaries (U.S. EPA).
                  4,000

                  3,500 -

                  3,000 -

              I  2,500 H
    Fully Supporting
    Threatened
    Impaired
                         Aquatic Life
                           Support
    Fish
Consumption
Shellfishing
 Primary
Contact -
Swimming
Secondary
 Contact
                                                  Designated Use
            Figure 5-20. Individual use support for assessed estuaries on the Gulf Coast (U.S. EPA).

      National Coastal Condition Report

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                                                                     Chapter 5
                                                                     Gulf of Mexico Coastal Condition
  The Gulf Coast states assessed only 184
miles (0.02%) of their 10,063 coastal shoreline
miles. Of the assessed shoreline miles, 60%
fully support their designated uses, 2% are
threatened for one or more uses, and 38%
are impaired by some form of pollution  or
habitat degradation (Figure 5-21). Individual
use support for assessed shoreline is shown
in Figure 5-22.
         Fully
      Supporting
         60%
                   Poor
                               Impaired
                                 38%
                             Threatened
                                 2%
   Figure 5-21.  Water quality for assessed shoreline on
   the Gulf Coast (U.S. EPA).
   120


   100

in
£  80 i
f

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Chapter 5   Gulf of Mexico Coastal Condition
          There are 233 waters located on the Gulf
       Coast that are listed as impaired under Section
       303(d) of the Clean Water Act. The percentage
       of listed waters impaired by each of the major
       pollutant categories is shown in Figure 5-23.

  1998 303(d) Impairments for the Conterminous United States
              Listed Miles                Listed Area
      Pesticides   6%
       Mercury
  Toxics/Organics
   Toxics/Metals/
      Inorganics
      Pathogens
      Nutrients
   Sedimentation  7%
                  39%
54%
                22%
    Pesticides
     Mercury
Toxics/Organics
 Toxics/Metals/
    Inorganics
    Pathogens
    Nutrients
 Sedimentation
0%

0%





]9%
|72%

|84%

|8S%

184%

                  SO
                       100
                                            so
                                                  100
             Percent Impaired
                  Miles
                     Percent Impaired
                      Square Miles
Figure 5-23.  1998 303(d) listed waters on the Gulf Coast and the
percentage of listed waters impaired by the major pollutant categories
(Note: A 303(d) listing may be impaired by multiple pollutants.) (U.S. EPA).

       State  Fish Consumption Advisories
          In 2000,14 fish consumption advisories
       were in effect for the estuarine and marine
       waters of the Gulf Coast. The majority of the
       advisories (10) were issued for mercury, and
       each of the five Gulf states had one statewide
       coastal advisory in effect for mercury in king
       mackerel (for fish greater than 39 inches).
       The statewide king mackerel advisories
       covered all coastal and estuarine waters in
                                          Florida, Mississippi, and Alabama, but covered
                                          only coastal waters in Texas and Louisiana.
                                          As a result of the statewide advisories, 100%
                                          of the coastal miles of the Gulf Coast were
                                          under advisory and 63.7% of the estuarine
                                          square miles were under advisory in 2000
                                          (Figure 5-24).
                                             Advisories placed on specific waterbodies
                                          included additional pollutants and fish species
                                          (Figure 5-25). For example, Bayou d'Inde
                                          in Louisiana, a small estuary, was under an
                                                                                   Number of
                                                                                   Advisories per
                                                                                   USGS Cataloging
                                                                                   Unit
                                        Figure 5-24. The number offish consumption advisories active in
                                        2000 (U.S. EPA NLFWA, 2000c).
                                                              Dioxins
                                                                7%  PCBs
                                                                     7%
                                                 Mercury
                                                  72%
                                          Figure 5-25.  Percentage of estuarine and coastal marine
                                          advisories issued for each contaminant on the Gulf Coast
                                          (U.S. EPA NLFWA, 2000c).
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                                                                   Chapter 5
                                                         Gulf of Mexico Coastal Condition
advisory for all fish and shellfish due to the
risk of contamination by PCBs, mercury,
hexachlorobenzene, and hexachlorobutadiene.
Florida had four additional mercury adviso-
ries, in addition to the statewide coastal
advisory. In Texas, the Houston Ship Channel
was under advisory for catfish and blue crabs
due to the risk of contamination by
dioxins/furans.

Classified Shellfish-Growing  Waters
   In the Gulf of Mexico region, 7.6 million
acres  (35% of the national total) were
classified for shellfish harvest in 1995
(Figure 5-26). Of the classified acreage, 47%
were approved and 53% were harvest-limited.
Nationally, the Gulf Coast ranks first in the
total amount of classified waters and last in
the percentage of approved waters. Of the
Gulf's classified acreage, 83% is located in
estuarine waters  and 17% in nonestuarine
waters. The top three pollution sources
affecting harvest limitation are upstream
sources, individual wastewater treatment
systems, and wildlife.
               Unclassified
                   15%
 Approved
   40%
 Prohibited 11%

  Conditionally Restricted 1%

Restricted 18%
         Conditionally
          Approved
             15%
   Good
           Fair
                 Poor
Figure 5-26. Classification of shellfish-growing waters in the
Gulf of Mexico (1995 Shellfish Register; NOAA, 1997).

  The Gulf's top shellfish species, the
eastern oyster, was rated high or medium
in abundance in 3 million acres (39% of the
                                region's growing waters). Seventeen percent
                                (517,459 acres) of eastern oysters are located
                                in waters that do not allow direct harvesting
                                (i.e., restricted, conditionally restricted,
                                and/or prohibited).
                                   Total classified acreage in the Gulf of
                                Mexico has increased by over half a million
                                acres since the 1990 Register. All of this new
                                acreage is located in nonestuarine waters.
                                Approved waters decreased slightly, from
                                48% in 1990 to 47% in 1995. All five Gulf of
                                Mexico states reported a decline in classified
                                acreage located in estuarine waters. At the
                                same time, Florida and Louisiana each added
                                over half a million acres of classified shellfish-
                                growing areas in nonestuarine waters.
                                   Summary of fish and shellfish under advisory for at least
                                   some part of the Gulf Coast:
                                   Ladyfish
                                   Catfish
                                   Gafftopsail catfish
                                   Jack crevalle
Shark
King mackerel
Spanish mackerel
Spotted sea trout
Shellfish
Crab
Blue crab
                          Atlantic thorny-oyster (Spondylus americanus) are seen filter feeding on all three
                          banks of the Flower Gardens as well as on the underwater structures of the
                          platforms (photo: Frank and Joyce Burek).
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        Mercury Contamination
        of Fishery  Resources

           Mercury cycles in the environment as a result of natural sources and human
        activities. It accumulates most efficiently in the aquatic food web, and many
        recreational and commercial fish species at the top of the food chain can accumulate
        high concentrations of mercury.
           The Gulf of Mexico Program (GMP), a partnership of federal agencies, the
        Gulf states, citizens, and the  private sector, was established to manage and protect
        resources of the Gulf and has recently released a collection of data on the occurrence
        of mercury in Gulf coastal fishery resources. The data were compiled from numerous
        sources, including fish tissue monitoring programs in all five Gulf states, EPA's
        EMAP, NOAAs NS&T Program, the National Marine Fishery Service, and the
        scientific literature.
           The results of the GMP data summary show that three species (king mackerel
        larger than 39 inches, bluefish, and blacktip shark) have a Gulfwide mean mercury
        concentration between 0.81  and 1.0 ppm. Fish consumption advisories are issued
        at different levels in each state, but generally a mercury level of 1.0 ppm will trigger
        an advisory for the general public to limit consumption. Special populations, such as
        children and pregnant women, may be advised to limit consumption when mercury
        levels reach 0.5 ppm. Other species with mercury levels greater than 0.5 ppm include
        Spanish mackerel, jack crevalle, and sand sea trout. Find the Gulfwide Mercury in
        Tissue Database on the Internet at http://www.duxbury.battelle.org/gmp/hg.cfm.
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                    Chapter 5
                                                               Gulf of Mexico Coastal Condition
Alcoa/Lavaca Bay Superfund Site.
Lavaca Bay, TX -
A  Case Study

  The Aluminum Company of
America (ALCOA) Point Comfort
Operations (PCO) Plant is located in _
Calhoun County in southeast Texas
near the city of Point Comfort. The
Plant is bordered by Lavaca Bay on
the west, and Cox Creek/Cox Lake
on the east. From 1966 into the
1970s, ALCOA operated a chlorine-alkali plant that produced chlorine gas and
sodium hydroxide. Part of this process involved the use of mercury cathodes.
Wastewater containing mercury was discharged into Lavaca Bay through outfalls
located on an offshore gypsum lagoon located on Dredge Island. Dredge spoils,
contaminated with mercury, were disposed of in  several areas on the site. Bay
sediments are now contaminated with the waste mercury.
  In March 1994, EPA and ALCOA signed an Administrative Order of Consent
for ALCOA to conduct a Remedial Investigation, risk assessment, and feasibility
study  for the site. Major sampling conducted during the Remedial Investigation
included an evaluation of sediments and surface  water in the "Closed Area" of
Lavaca Bay (see figure) and the remainder of Lavaca Bay (including Cox Lake, Cox
Marsh, and portions of western Matagorda Bay)  as well as sampling and analysis
of finfish, shellfish, and prey items from Lavaca Bay. The  primary contaminants
of concern for the bay system include mercury and PAHs.
  In April 1988, the Texas Department of Health (TDH) issued an order prohibiting
the taking of finfish and crabs from the "Closed Area" of Lavaca Bay due to levels of
mercury in fish tissue above Food and Drug Administration standards. In January
2000, the TDH reduced the size of the "Closed Area" based on the reductions of
mercury contamination in fish tissue.
  Following the completion of the Remedial Investigation, the feasibility study, and
a baseline risk assessment, a Proposed Plan will provide the EPA's proposed remedial
action for the site. The remedial action decided upon will be presented in a Record
of Decision (ROD) following public meetings and public comment. The ROD will
present the cleanup measures determined to be protective of human health and the
environment. These cleanup measures should eventually result in TDH rescinding
the Fish Closure order. This would enable the community to keep fish and shellfish
from all areas of Lavaca Bay.

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Chapter 5   Gulf of Mexico Coastal Condition
       Beach  Closures
         Four  of the five Gulf Coast states reported
       information about monitoring and beach
       closures to EPA in 1999 (Louisiana did not).
       Overall, a total of 85 beaches responded, with
       the majority of the respondents (85%) located
       in Florida.  Of these 85 Gulf beaches, 79%
       (67 beaches) had a water quality monitoring
       program (Figure 5-27).
         In Florida, 81% of the beaches responding
       reported that monitoring was conducted in
       1999. It is estimated that at least 60 miles
       of beach coastline were covered by this
       monitoring. Ten beaches (14%  of reporting
       beaches) on Florida's Gulf Coast reported
       closing  at least once in 1999 (Figure 5-28).
       The primary reason for beach closures was
       elevated bacteria levels due to storm water
       and other runoff.
         In Mississippi, only one coastal beach
       responded  to EPA's survey. The Mississippi
       beach reported the existence of a monitoring
       program that covered the entire 40 miles of
       beach coastline and was partially closed twice
       in 1999. One beach in Louisiana, on the south
       shore of Lake Pontchartrain, was closed
       throughout the year in 1998 due to elevated
       bacterial levels from sanitary sewer overflows
       and pipe breaks. However, in 1999, no
       Louisiana beaches reported information
       to EPA.
        Beaches Conducting Monitoring
    LA
                               58
    AL
       0
20
40
60
80
Figure 5-27. Number of beaches in each state that
responded to the survey versus the number of beaches
that are monitored (U.S. EPA).
                 Percentage of
                beaches closed
                 per county:
                   0-15
                   15-35
                   35-100
                   No Data
                   Available
                   Beach Closure
                   in 1999
                                                           Figure 5-28. Locations of beaches for which information
                                                           is available. Of the beaches submitting information, I 3/6 were
                                                           closed at least once in 1999.
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                                                        Chapter 5
                               Gulf of Mexico Coastal Condition
Summary
                       Ecological conditions in Gulf estuaries are fair to poor
                     (Figure 5-29). The primary problems in Gulf Coast estuaries in
                     the 1990s are sediment contamination, wetland losses, poor benthic
                     conditions, and high expression of eutrophic condition. Over
                     25% of sediments are enriched or exceed ERL guidance. Although
                     this problem may be improving, benthic community degradation
                     (23% of sediments), expression of eutrophic conditions (currently
                     32%), and wetland losses (currently about 5% per decade) are
                     worsening. Unless these problems are addressed in the early
                     21st century, improvements in sediment contaminant quality
                     will be overshadowed by decreases in the quality of biotic
                     communities and increases in coastal eutrophication. Although
                     eutrophic condition is an issue for many estuaries, dissolved oxygen
                     conditions are good in Gulf of Mexico estuaries (excluding the
                     hypoxia issues on the Gulf of Mexico shelf off of Louisiana). Fish
                     condition is poor with several consumption advisories throughout
                     the Gulf Coast. Because population growth in coastal areas along the
                     Gulf of Mexico is expected to increase in the 21st century, many (if
                     not all) of these environmental problems will be exacerbated in the
                     next 10 to 20 years. The Gulf Coast of Florida alone is home to more
                     than 4 million people and is currently experiencing explosive growth
                     and development. Clearly this is a region of the country requiring
                     continued monitoring and environmental programs to clean up
                     existing problems and prevent the worsening of conditions
                     throughout the Gulf.

                           Overall
                            Gulf
                              Fair
Poor)
                           Water Clarity
                           Dissolved Oxygen
                           Coastal Wetlands
                           Eutrophic Condition
                           Sediment
                           Benthos
                           Fish Tissue
                     Figure 5-29. The overall condition of Gulf of Mexico coastal resources is fair to poor
                                                             National Coastal Condition Report

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        Habitat Improvements  in the Gulf Coast -
        The Tampa Bay Estuary Program

           In the late 1960s and early 1970s, the ecological condition of Tampa Bay
        declined dramatically. Polluted wastewaters, dredging and filling of habitat,
        and rapid development of the shoreline posed
        serious threats to the future of the bay. The
        Tampa Bay Estuary Program estimates that
        more than 40% of the seagrass meadow acreage
        was lost from 1950 to 1984. A centerpiece of
        Florida's Gulf Coast, Tampa Bay is home to
        more than 2 million residents, receives 8 million
        visitors each year, and contributes almost $5
        billion annually to the area's economy (Liner
        et al., 1994).
                                                   50
                                                   40
                                                -§  30
                                                U
                                                 d)
                                                 gp 20
                                                I  10
                                                          Assessment of Historical Trends
                                                                Hillsborough Bay
                                                                 Chlorophyll a
                                                     1970        1980
                                                                    Year
                                                     Source: EPC of Hillsborough County
                                                                          1990
                                                                                     2000
                                                       Average annual concentration of chlorophyll a in
                                                       Hillsborough Bay, a section of Tampa Bay, dropped steadily
                                                       as wastewater management plans were implemented.
                                                                  Assessment of Historical Trends
                                                                       Hillsborough Bay
                                                                    Measured as Secchi Depth
                                                        f
  Initiatives to improve wastewater
management and treatment led to dramatic
improvements in water quality and, eventually,
bay habitat. Beginning in 1984, the frequency
and duration of phytoplankton  blooms declined,
water clarity and oxygen levels began to
improve, and seagrasses began to recover.
Improvements in water quality can be seen
in long-term  trends in chlorophyll a—a measure
of the amount of phytoplankton in the water
(top right). Reductions in chlorophyll a also
correspond to increases in water clarity,
presented here as Secchi depth (bottom right).
Historical trends also show a marked recovery
in seagrass meadows. Surveys record over
5,000 acres of recovered seagrass meadow in
Tampa Bay since 1984. Although the rate of
seagrass expansion has decreased in some areas of the bay in the last few years,
current baywide  expansion rates are approximately 350 acres of seagrass per year.
                                                           2.0
                                                           1.5
                                                           i.o
                                                           0.5
                                                             1970       1980        1990       2000
                                                                            Year
                                                             Source: EPC of Hillsborough County

                                                       Water clarity improved throughout the 1980s and most
                                                       of the 1990s in Hillsborough Bay.
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                                                        Chapter 5
                Gulf of Mexico Coastal Condition
Alabama Environmental Monitoring  and Assessment  Program

  In 1993, the Alabama Department of Environmental Management (ADEM) initiated an
environmental monitoring and assessment program (ALAMAP-C) for Alabama's coastal
waters. The goal of ALAMAP-C is to provide information on the overall health of the
coastal environment and to track changes over time. ALAMAP-C has conducted annual
surveys of estuaries to measure various coastal water quality parameters. Ecological health
is assessed by investigating the spatial distribution of physical, biological, and chemical
indicators of water quality. ALAMAP-C determines the portions of estuaries that support
conditions favorable for both aquatic life and human use. ALAMAP-C also attempts to
determine why certain areas may not be favorable
for either aquatic life or human use.
Alabama Estuaries
Sampling Station
Locations
Summer 1993-1995
                                                                  Sampling Stations
                                                                  by Year
                                                                    • 1993
                                                                    • 1994
                                                                    • 1995
                                                ALAMAP-C sampling stations.
  The overall sampling design and strategy for
monitoring indicators of ecological condition
was inspired by the U.S. Environmental Protection
Agency's EMAP-Estuaries efforts in the Gulf of
Mexico (see map). ALAMAP-C has successfully
completed sampling efforts during the summer
months of 1993-2000 in all of Alabama's near-
coastal waters. During the period 1993-1999,
ALAMAP-C investigated  the ecological condition
of Alabama's estuarine waters, including Mobile Bay,
Perdido and Wolf Bays, the Alabama section of Mississippi Sound, and the tidal/delta
portions of the Mobile and Tensaw Rivers. In 2000, ALAMAP-C became an integral
part of EPA's Coastal 2000 Program and the Gulf of Mexico Program's Joint Gulf
States Comprehensive Monitoring Program.

                       In 1998, ADEM published A Report on the Condition of
                     the Estuaries of Alabama  in 1993-1995: A Program in Progress,
                     describing the initial years of the program. The 1998 report
                     represents the first in a planned series of reports on the state
                     of Alabama's coastal waters based on  the information collected
                     by ALAMAP-C. As the program progresses, subsequent reports
                     will seek to strengthen the statistical certainty and provide a series
                     of documents portraying the changing conditions of Alabama's
                     coastal waters. In 2001, ADEM will publish the second in its series
                     of continuing reports covering the years 1996 to 1999.

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Chapter
         West
         Coastal
         Condition

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Chapter 6
            West Coastal Condition
            Just beyond the Golden Gate of San Francisco lies an ocean wilderness awaiting discovery
            (Photo: Gulf of the Farallones NMS).
Ecological
                                            in western estuaries
            are fair, based on the information available from various
            monitoring efforts (Figure 6-1). The estuaries of the West Coast
            of the United States represent a valuable resource that
            contributes to the local economies of the area and enhances the
            quality of life for those who work in, live in, or visit there. The
            population of coastal counties on the West Coast increased
            45% between 1970 and 1980 (U.S. Bureau of the Census, 1996).
            The western coastline comprises 410 estuarine systems
            (4,648 mi2) although three systems — San Francisco Bay,
            Columbia River, and Puget Sound — make up 72% of the total
            surface area. Smaller estuarine systems associated with these
            large systems make up another 28% of the total surface  area.
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                                                                       Chapter 6    West Coastal Condition
  Overall
  West
 Good   Fair
        Poor I
Water Clarity

Dissolved Oxygen
Coastal Wetlands

Eutrophic Condition
Sediment

Benthos
Fish Tissue
                   Figure 6-1. The overall
                   condition of western
                   estuaries is fain although
                   dissolved oxygen and water
                   clarity conditions are good.
   The West Coast
Probabilistic surveys like those completed for the
Northeast, Southeast, and Gulf Coasts do not exist for
the estuarine areas of the West Coast except in selected
areas.Therefore, spatial estimates of ecological condition
consistent with those described in earlier chapters cannot
be determined except for the Southern California Bight
and Puget Sound. However, monitoring data from other
programs have been used to  assess ecosystem condition to
the extent possible.The Coastal 2000 program is collecting
probabilistic data from all West Coast estuarine systems in
1999-2000.

    A sea star uses its tube feet to feed on sediments,
    bivalves, fish, and even  other sea stars! These active
    scavengers are found on both sandy bottoms and
    rocky reefs (Photo:  Laura Francis).
Coastal Monitoring Data

  Very little consistent monitoring has been
completed on the West Coast to examine
estuarine condition. Unlike condition
estimates developed for East and Gulf Coast
estuaries, there are no consistent surveys of
condition in the West Coast estuaries. Limited
available data have been used to provide a
qualitative, but statistically unsupported,
estimate of condition. Estuarine-specific
surveys for San Francisco Bay and Puget
Sound have been completed, and these
waterbodies continue to be monitored. In
1999, the Washington Department of Ecology,
Oregon Department of Environmental
Quality, Southern California Coastal Water
Resources Project, and California Fish and
Game jointly assessed the 400 small estuaries
and small tidal rivers making up the West
Coast (Washington, Oregon, and California)
by using a  probabilistic design to sample
210 locations within these systems. Sampling
was completed in 1999 for water quality,
sediment quality, and biota. Information for
dissolved oxygen, light penetration,  and
sediment toxicity is currently available.
Information for sediment contaminants, tissue
residues, fish community parameters, and
benthic communities was collected in 2000 and
will be available in 2002.
  Relatively few "national"  programs have
monitoring stations in western estuaries.
NOAA's NS&T Program and Bioeffects
Surveys have data for several western
locations, but these sites are not representative
of all western estuaries. EMAP began sampling
in western estuaries in 1999, and only a small
amount of information is currently available.
NOAA's National Estuarine Eutrophication
Assessment examined a number of

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Chapter 6
West Coastal Condition
       eutrophication variables for western estuaries
       through the use of a survey questionnaire. In
       addition, EMAP-like surveys have been
       completed in the Southern California Bight
       (SCCWRP, 1998). This offshore survey
       represents the only probabilistic survey of
       ecological condition for nearshore coastal
       waters to date.
         The following discussions  will be broken
       into five categories—overall west, small
       estuaries of the West Coast, San Francisco Bay,
       Puget Sound, and Southern California Bight.

       Overall West

         Regional data were available for two of the
       seven indicators for the West Coast—coastal
       wetlands and eutrophic condition.


             Coastal Wetland Loss
         During the 200-year period from the 1780s
       to the 1980s, the West Coast  experienced the
       greatest proportional losses of wetlands of
       anywhere in the United States (Figure 6-2),
       however, the absolute losses are not as  large as
       in most other regions. Throughout the West
       Coast, wetland losses of 68% were observed,
       ranging from 31% in Washington to 91%
       in California.
        q 100
          60
          40
        « 20
                 91
                         38
                                  31
               Caifornia    Oregon  Washington West Coast


       Figure 6-2. Percent wetland habitat loss from 1780 to 1980
       by state and for the West Coast overall (Dahl, 1990;Turner and
       Boesch, 1988).
                                                     Eutrophic Condition
                                                 The condition of West Coast estuaries as
                                              measured by expression of eutrophic condition
                                              is poor. Estuaries with high expression of
                                              eutrophic condition represent 20% of the
                                              surface area of western estuaries (Figure 6-3).
                                                    Eutrophic
                                                    Condition
                                                    West Coast
                                                    Sites with High
                                                    Expression of
                                                    Eutrophic Condition
                                            Low/Unknown
                                                29%
                                                             Moderate
                                                                51%
                                            Good
                                                    Fair
                                                          Poor
                                           Figure 6-3. Eutrophic condition data for West Coast estuaries and
                                           locations of sites with high expression of eutrophic condition (NOAA/NOS).
                                              Small Estuaries
                                              of the West Coast
                                                 Small estuaries along the West Coast are
                                              defined as those that are less than 97 square
                                              miles in size and are not part of Puget Sound
                                              or San Francisco Bay. These small estuaries
                                              make up about 28% of the estuarine area of
                                              the West Coast (excluding Puget Sound and its
                                              small systems, San Francisco Bay and its small
                                              systems, and the Columbia River).
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                                                                      Chapter 6    West Coastal Condition
      Water Clarity
  Water clarity in small estuaries on the West
Coast is good. Light penetration was poor at
only one of the 210 sites sampled, representing
less than 1% of the total area of these small
systems (Figure 6-4). This number represents
water clarity only in late summer and does not
represent high-flow springtime conditions.
The poor water clarity site is located on Grass
Creek, Washington.
      Dissolved Oxygen
  Dissolved oxygen conditions in small
estuaries on the West Coast are good.
Dissolved oxygen was never measured below
2.0 ppm.
      Sediment Contaminants
  No data are currently available for small
West Coast estuaries. Sediment contaminant
data were collected in 2000 and will be
available in 2002.
      Benthic Condition
  No data are currently available for small
West Coast estuaries. Benthic index data were
collected in 2000 and will be available in 2002.
  Sediment toxicity was determined for these
small estuaries using a static 10-day acute
Ampelisca abdita bioassay. Greater than 15%
control-corrected mortality would result in a
sediment's being deemed toxic. For small
estuaries along the West Coast (Washington
and California only), 25% of sediments were
toxic to the amphipod (Figure 6-5). These
toxic sediments were located largely in Grays
Harbor, Willapa Bay, and Grays Bay in
         Water Clarity
         West Coast
Figure 6-4. Sites with 
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Chapter 6
West Coastal Condition
       Washington and in San Luis Obispo Bay, Santa
       Monica Harbor, and several small river
       systems (e.g., Smith River, Garcia River,
       Klamath River, Los Angeles River, and San
       Diego River) in California.

       Southern California Bight
       (Offshore)
         The Southern California Bight (SCB)  is
       defined as the 186 miles of recessed coastline
       between Point Conception, California, and
       Cabo Colnett, Mexico. Figure 6-6 shows the
       U.S. portion of the SCB. The dramatic change
       in the angle of the coastline creates a large
       backwater eddy in which equatorial waters
       flow north nearshore and subarctic waters
       flow south offshore. This unique oceano-
       graphic circulation pattern creates a biological
       transition zone between warm and cold waters
       that contains over 500 marine fish species
       and more than 5,000 invertebrate species.
         Human uses of the coastline and ocean
       waters of the Bight include recreation,
       tourism, aesthetic enjoyment, sport and
       commercial fishing, coastal development,
       and industry. Ocean-dependent activities
                                 • Storm Water
                                  Discharge Areas

                                 • POTW Outfall
                                  Areas
                       Dume

                         Los Angeles

                             Dane
                             Point
         Inset:
         Santa Monica Bay
                                             contribute approximately $9 billion to
                                             the economies of coastal communities
                                             surrounding the SCB and support over
                                             175,000 jobs. The area bordering the SCB is
                                             also home to nearly 20 million people, making
                                             it one of the most densely populated
                                             shorelines in the United States. Almost
                                             the entire SCB coastline has been subjected
                                             to development, waste discharges, or other
                                             forms of resource utilization.
                                               Prior to 1994, the Southern California
                                             Coastal Water Resources Project (SCCWRP)
                                             conducted monitoring programs at numerous
                                             sites within the SCB amounting to $10 million
                                             in monitoring annually. However, this moni-
                                             toring could not address concerns about the
                                             ecological condition of the Bight and the
                                             direct effects of discharges on the SCB (only
                                             5% of the area was represented in sampling).
                                             In 1994, recognizing the need for integrated
                                             assessment of the SCB, 12 government
                                             organizations (including the four largest
                                             municipal wastewater dischargers) colla-
                                             borated to complete the first comprehensive
                                             regional monitoring survey of the SCB under
                                             the name of the Southern California Bight
                                             Pilot Project (SCBPP). SCBPP sampled 261
                                             sites in the SCB between July and August 1994.
                                             Sampling sites included all coastal and oceanic
                                             areas within the Bight between 98  and
                                             2,133 feet in depth.
                                                             Water Clarity
                                                          Water clarity was good throughout the SCB.
      Figure 6-6. The Southern California Bight (SCB).
                                                • Dissolved  Oxygen
                                               Dissolved oxygen conditions in the SCB are
                                             good. Almost all of the surface waters were
                                             fully saturated with oxygen and more than
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                                                                     Chapter 6    West Coastal Condition
99% of SCB waters met California Ocean Plan
water quality objectives for temperature, pH,
light transmittance, and dissolved oxygen.
      Sediment Contaminants
  Sediment contaminant conditions in the
Southern California Bight are poor. ERM
values were exceeded in 12% of SCB
sediments with most exceedances due to DDT.
Over half (55%) of SCB sediments were
characterized by contaminant concentrations
greater than the ERL guideline but less than
the ERM. With 67% of sediments having
contaminants that could potentially have
ecological effects, the SCB has the most
contaminated sediments in the United States
(Figure 6-7). Sites exceeding the ERL and
ERM thresholds were widespread throughout
the SCB. The constituent that had the greatest
area! extent for potential biological
impairment was total DDT, exceeding
screening levels in 64% of SCB sediments
(866 mi2 > ERL) and 10% of sediments
exceeding ERM. Total PCBs was the next
constituent with greatest areal extent
(1% > ERM and 15% > ERL).
Figure 6-7. Sites exceeding ERL (small circles) and ERM (large
circles) were widespread throughout the Southern California Bight
(SCBPP).
         Sediment Contaminant Criteria
       ERM (Effects Range Medium) -
       The concentration of a contaminant
       that will result in ecological effects
       approximately 50% of the time
       based on literature studies.
       ERL (Effects Range Low)  - The
       concentration of a contaminant that
       will result in ecological effects about
       10% of the time based on literature
       studies.

  Sediment contaminants introduced by
human activity were present in 89% of the
SCB. The pesticide DDT was the most
widespread contaminant. It was found in
82% of the SCB sediments (Figure 6-8). The
highest concentrations of DDT occurred on
the Palos Verde shelf. Most of the observed
DDT represents DDT metabolites and is the
result of chemical degradation from DDT
discharges over the past 40 to 50 years.
Elevated levels of PCBs and trace metals were
found in  approximately half of the sediments
of the SCB. The highest metal concentrations
were typically found in Santa Monica Bay.


80
60

40
20
n
82











46 S0
















                                                                DDT
                                                                         PCBs
                                                                                  Metals
  Figure 6-8. Sediment contaminants introduced by human
  activity were present in 89% of the Southern California Bight
  (SCBPP).
                                                                   National Coastal Condition Report

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Chapter 6
West Coastal Condition
             Benthic Condition
         Benthic communities in the Southern
       California Bight are in good condition.
       Benthic communities showed degradation in
       only 9% of SCB sediments compared to
       reference sites (Figure 6-9). Of these degraded
       communities, most (7%) showed minor
       deviations representing small shifts in
       community composition. Only 2% showed
       losses in biodiversity. These observations
       support the toxicity findings, showing that,
       although the sediments are contaminated, the
       contamination is resulting in few biological
       and/or lexicological effects.
         While extensive sediment contamination
       was observed in SCB sediments, acute toxicity
       tests using Ampelisca abdita showed none of
       the sediments to be significantly more toxic
       than control sediments. The toxicity results
       from the  SCBPP, when compared to results
       from studies performed in bays and estuaries
       throughout the United States, indicate that the
       quality of the sediments in the SCB is
       generally higher than that in the remainder of
       the United States. This apparent contradiction
                                              is explained by the fact that, although the SCB
                                              sediments are among the most contaminated
                                              in the United States, they are not biologically
                                              available because of the way in which they are
                                              bound to the sediments.
                                                    Fish Tissue Contaminants
                                                The condition of SCB as measured by fish
                                              tissue contaminants is poor. Contaminants in
                                              fish tissues were widespread—the livers of
                                              nearly all individuals of two target species of
                                              flatfish (Pacific sanddab and longfin sanddab)
                                              contained DDT and PCBs (Figure 6-10). All
                                              samples of a third flatfish, Dover sole, were
                                              contaminated by DDT. The three highest
                                              observations  of DDT and PCB concentrations
                                              in fish livers occurred in fish collected from or
                                              near the Palos Verde shelf. However, both DDT
                                              and PCB concentrations found in fish livers
                                              throughout the SCB were 95% lower than
                                              those measured in the 1970s. Both DDT and
                                              PCB concentrations in  fish livers from
                                              reference areas were 5% of the concentrations
                                              observed during the last two decades. No other
                                              contaminants were observed in fish tissues
                                              in 1994.
               Benthic Infaunal Communities

^
o
L)
0.

80
60
40

20
n





91









1 — I JL o o
         No      Marginal     Loss in     Loss in    Defaunation
      Difference   Deviation  Biodiversity  Community
                                   Function
     Figure 6-9. Benthic communities showed degradation in only
     9% of SCB sediments compared to reference sites (SCBPP).
                                                                        Fish Contamination

80

60
40
20
n

.

-
100




88








96





• DDT
D PCBs

3
                                                        Pacific Sanddab
                                                                         Dover Sole
                                              Figure 6-10. Contaminants were found in the livers of nearly
                                              all individuals of two target species of flatfish (SCBPP).
      National Coastal Condition Report

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                                                                      Chapter 6    West Coastal Condition
  Fish communities in the SCB were largely
healthy, and their status has improved
noticeably over documented conditions in the
1970s. External fish diseases and pathologies
were prevalent in the 1970s and were virtually
absent in 1994.

San Francisco Bay

  San Francisco Bay is one of the largest
single estuarine resources along the western
coastline of the United States. Because of its
tectonic development, San Francisco Bay is
unlike many estuaries in the United States and
has its own, relatively unique circulation and
depositional patterns and exchange rates with
the Pacific Ocean. In addition, significant
water withdrawal for agricultural use from the
San Joaquin and Sacramento Rivers results in
increased movements of high-saline waters
into areas of the Bay that were traditionally
mesohaline or oligohaline. Monitoring and
assessment efforts in the San Francisco Bay
have been active since the early 1990s. The San
Francisco Estuary Institute (http://www.sfei.
org), in collaboration with the San Francisco
Bay Estuary Project (http://www.abag.ca.gov/
bayarea/sfep), is examining and assessing
water quality, sediment quality, and fish tissue
residues as part of the Regional Monitoring
Program (RMP) (May et al., 2000).
  Water and sediment provide habitat for
most of the estuary's biota, including the
foundation of the estuarine food web—
phytoplankton. Surveys to date have
concentrated on whether water quality
and sediment quality meet contaminant
guidelines, the condition of benthic
communities, and the tissue residue
concentrations in selected fish populations.
For water, the guidelines consider both
laboratory studies and field observations and
are aimed at protecting a particular set of
qualities valued by the society. For sediment
quality, guidelines were based on concentra-
tions shown to result in adverse effects (Long
et al., 1995). For fish tissue residues, guidelines
were calculated by the Regional Water Quality
Control Board in conjunction with EPA and
are intended to protect the fish-consuming
population.
      Water Clarity
  The water clarity data available for San
Francisco Bay are not included in this report
due to differences in the sampling design
used to collect the data. These data are not
comparable to the data used to establish
indicators for the other coastal regions
throughout the report.

      Dissolved Oxygen
  The dissolved oxygen data available for San
Francisco Bay are not included in this report
due to differences in the sampling design
used to collect the data. These data are not
comparable to the data used to establish
indicators for the other coastal regions
throughout the report.
                                                                    National Coastal Condition Report

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                  LV^
 Highly susceptible
 to water quality
 degradation; very
 low dissolved
 oxygen has been
 measured
           Moderately
susceptible to water no measure of
quality degradation; low dissolved
low dissolved    oxygen
oxygen has been
measured
                                                                 Puget Sound
                                                                 marine waters
                                                                 sensitive to
                                                                 water quality
                                                                 degradation
                                                                 from nutrient
         Puget Sound Ambient
         Monitoring  Program  (PSAMP)

           The protected marine waters of Puget Sound provide
         valuable habitat for fish and wildlife, and they also
         support one of the leading trade centers on the West
         Coast. The region's natural and economic resources
         have led to booming population growth, which places
         increasing stress on Puget Sound. As pressures on the
         environment of the Sound become greater, the need for a
         coordinated monitoring program to direct management
         goals and actions is clear. The Puget Sound Ambient
         Monitoring Program (PSAMP) is a long-term effort to
         investigate environmental trends and to improve
         environmental management decision-making. PSAMP is
         conducted by local, state, and federal agencies including
         the Washington  State Departments of Ecology, Fish and
         Wildlife, and Health and Natural Resources; EPA; and the
         National Marine Fisheries Service. Through PSAMP studies, data on marine and
         fresh waters, fish, sediments, and shellfish in Puget Sound have been collected since
         1989; surveys of nearshore habitat have been conducted since 1991; marine bird
         populations have been surveyed since 1992; and marine bird contamination has
         been studied since 1995.
           PSAMP releases a report on the status and trends of Puget Sound environmental
         variables every 2 years. According to the 2000 Puget Sound Update report (available
         at www.wa.gov/puget_sound on the Internet), 23 areas of Puget Sound (representing
         54% of the areas that are monitored) show either low dissolved oxygen or
         susceptibility to  eutrophication (see figure), although general water quality is
         considered to be improving. The 2000 report identifies pollution, loss of habitat, and
         continuing development as the greatest threats to the health of the Sound. Despite
         improvements such as  the reopening of several commercial shellfishing areas and the
         declining trend of PCBs found in harbor seals, a number of indicators show that the
         health of the Sound remains threatened. For instance, the levels of fecal coliform
         bacteria violate the state standards at more than half of the river and stream monitoring
         stations in the basin, and the populations of many fish species living in the  Sound,
         such as Pacific herring and chinook salmon, are in peril. In 1999, chinook salmon
         in Puget Sound were listed as "threatened" under the Endangered Species Act.
National Coastal Condition Report
                     Susceptible but
Areas of Puget Sound sensitive
to eutrophication (PSAMP).

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                                                             Chapter 6    West Coastal Condition
                                                    Columbia River
                                                         Portland
                                                  Willamette Riv
                                            The Lower Columbia River
Lower  Columbia  River
htt p ://www. I c re p. o rg
  The Lower Columbia River is home to
some of the most spectacular scenery on the
North American continent. Over 2.5 million
people live and work in this region. This area
is extremely rich in living resources including
shellfish, Dungeness crabs, sturgeon, anadromous fish, and nearly 175 species
of shorebirds. The Columbia River also supports the world's largest hydroelectric
system and the second largest port area on the West Coast. Six major pulp and paper
mills line the  lower Columbia River. The Lower Columbia River Estuary Program
has developed a management plan designed to balance human interests while
safeguarding this area's wealth of natural resources.
  Human activity over the last century has strained the natural resources. The
lower 46 miles of the Columbia River have lost as much as 70% of their tidal wetland
acreage since  1948 (see chart). Resource managers estimate that salmon stocks are
currently less than 10% of their historic size, and artificial stocks make up 75% of
the returning salmon. Twelve species of anadromous fish, including five species of
salmon, are either threatened or endangered in the Lower Columbia River. In all,
the Lower Columbia River system contains 25 threatened or endangered species.
Current trends suggest that the human population in this region will increase 30%
by 2010. Accommodating human population growth while preserving this area's
natural wealth is a challenge for resource managers.
  The Lower Columbia River Estuary Program has developed a management plan
to address these issues. The Comprehensive Conservation and Management Plan
emphasizes habitat restoration, education, and environmental monitoring. The
Management Plan calls for 16,000 acres  to be
restored or protected by 2020. The Program also
places priority on education programs for young
citizens. By building the capacity of existing
education activities, the Program hopes  to fill
information gaps about the river. To measure the
health of the river over time, the Program is also           -   m8  |96,   |973   |983  ,99,
implementing a long-term monitoring program.   Loss of wetland acreage in the lower 46 miles of
                                               the Columbia River since  1948 (Lower Columbia
                                               River Estuary Program).

                                                Wetland Loss in the Estuary from River Mile 0 to 46
                                                            1948 to 1991
                                                 «, 12,000 n

                                                           National Coastal Condition Report

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Chapter 6
West Coastal Condition
             Sediment Contaminants
         Sediment contaminant conditions in San
       Francisco Bay are poor. All samples taken from
       1993 to 1998 at each of 16 sites within San
       Francisco Bay exceeded sediment guidelines
       for at least one contaminant (Figure 6-11).
       These exceedances generally occur for 10%
       to 35% of contaminants measured in
       sediments (about 30 contaminants at each site)
       (Figure 6-12). Of sediment quality parameters
       measured, 39% exceeded levels set by sediment
       quality guidelines.
         Using the same approach, 40% to 100%
       of samples (6 to 16 samples) taken from San
       Francisco Bay from 1993 to 1998 exceeded
       water quality guidelines  (Figure 6-13) for one
       or more contaminants. Figure 6-14 shows the
       percentage of measurements (45 contaminants
       measured at each site) that were over guideline
       values. Approximately 5% to 20% of all
       contaminant measurements in water exceeded
       guidelines in the period  1993 to 1998.
                                                                        Sites Where
                                                                        Sediment
                                                                        Quality Samples
                                                                        Were Taken
                                                Figure 6-11. All samples taken from 1993 to
                                                1998 at each of the 16 sites within San Francisco
                                                Bay exceeded sediment guidelines for at least one
                                                contaminant. Four to 12 samples were taken at each
                                                site (from San Francisco Bay RMR May et al., 2000).
                           Percentage of Criteria
                           Exceeding Guidelines
                               • 0-10%
                               O I  I -20%
                               • 21-30%
                               • 31 -40%
                                                      Percent of Sediment Measurements
                                                         Exceed Guidelines (Percent Toxic
                                                            Measurements)  1993-1998
                                                                         That
       Figure 6-12. The percentage of sediment quality parameters that exceeded guideline values. A total of I 19
       to 354 measurements were taken at each site (from San Francisco Bay RMR May et al., 2000).
      National Coastal Condition Report

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                                                                         Chapter 6     West Coastal Condition
                      Percentage of Samples
                        Taken Exceeding
                      One or More Water
                       Quality Guidelines
                          • 40-55%
                          O 56-70%
                          • 71-85%
                          086-100%
Figure 6-13. Of samples taken from 1993 to 1998 at
each of I 6 sites within San Francisco Bay 40% to  100%
exceeded water quality guidelines for at least one
contaminant. Six to  I 8 samples were taken at each site
(from San Francisco Bay RMR May et al., 2000).
            O

                      Percentage of Criteria
                      Exceeding Guidelines
                          OO-5%
                          O 6-10%
                          O M-15%
                          O 16-20%
                          • 21 -25%
                                                     Figure 6-14 shows the percentage of water
                                                   quality parameters that exceeded guidelines
                                                   for water for each of the major contaminants
                                                   examined. Of water quality parameters
                                                   measured, 18% exceeded levels set by water
                                                   quality guidelines. Table  6-1 shows the trend
                                                   in the percentage of contaminants meeting
                                                   the guidelines.
Table 6-1. Contaminants Meeting Water Quality Guidelines
from 1 994 to 1 998
Contaminant
Chromium
Copper
Mercury
Nickel
Lead
Selenium
Zinc
PAHs
Diazinon
Dieldrin
Chlordanes
DDTs
PCBs
1994
(%)
94
83
79
83
96
100
96
61
93
80
100
98
7
1995
(%)
91
85
80
83
94
100
98
69
100
96
93
92
13
1996
(%)
93
88
87
85
96
100
99
53
94
94
84
90
8
1997
(%)
85
90
67
81
90
97
92
59
100
55
87
88
19
1998
(%)
82
97
75
84
92
99
92
25
100
87
89
91
20
                                                Source: May et al., 2000.
                                                    Percent of Water Measurements That
                                                      Exceed Guidelines (Percent Toxic
                                                          Measurements)  1993-1998
Silver
Arsenic
Cadmium
Chromium
Copper
Mercury
Nickel
Lead
Selenium
Zinc
Total PAHs
Total PCBs
Pesticides
0%
0%
0%
121%
Z|IO%
121%
| 30%
mio%
0%
^9%
147%

185%
H7%
Toxicity | ||Q%
Overall ••[3%
                                                                  20
                                                                       40
                                                                             60
                                                                                  80    100
                                                                        Percent
Figure 6-14. The percentage of water quality parameters that exceeded guideline values (from San Francisco Bay
RMR May et al., 2000).

                                                                       National Coastal Condition Report

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Chapter 6
West Coastal Condition
             Benthic  Condition
         The benthic condition data available for
       San Francisco Bay are not included in this
       report due to differences in the sampling
       design used to collect the data. These data are
       not comparable to the data used to establish
       indicators for the other coastal regions
       throughout the report.
             Fish Tissue Contaminants
         The condition of San Francisco Bay
       in terms of fish contaminants is poor. In
       1997, the RMP examined over 300 fish for
       contaminant residues. The fish in the estuary
       contain several contaminants at levels high
       enough to raise concern for the health
       of both humans and wildlife (e.g., harbor
       seals). Exceedance of the "screening values"
       (developed to reflect the potential for human
       health concerns and a need for further study)
       showed that over 50% of fish examined
                                               exceeded these values for mercury and PCBs
                                               (Figure 6-15). Seven fish were subsampled to
                                               analyze for dioxin concentrations, and 100%
                                               of those fish examined exceeded the dioxin
                                               screening value. Screening values for DDT,
                                               chlordane, and dieldrin were exceeded in
                                               15% to 37% of the fish sampled. PCBs and
                                               pesticides were highest in white croaker and
                                               shiner surfperch, while mercury was highest
                                               in striped bass and leopard sharks. The fish
                                               collected from the Oakland Harbor region
                                               contained the highest concentrations of
                                               contaminants.
                                                 Some estuarine contaminants in San
                                               Francisco Bay are clearly reduced from peak
                                               levels seen in earlier decades (May et al.,
                                               2000). Nevertheless, there are several
                                               indications that the level of contamination is
                                               still high enough to impair the health of the
                                               San Francisco Bay estuary. As a whole, the
                                               estuary would be assessed as being moderately
                                               contaminated. Overall, the sites in the lower
                                               South Bay, the Petaluma River mouth, and San
                                            Fish Contamination in the San Francisco Bay- 1997

                                                White   Shiner         California  Striped   White   Leopard
                                               Croaker  Surfperch Jacksmelt  Halibut   Bass   Sturgeon   Shark
                                                                              >

                                                                              I

                                                         >      "     '       »     »    fc
                                                         l      r     r
                                                      Proportion of Measurements that Exceeded Guidelines
             Figure 6-15. The fish in the estuary contain several contaminants at levels high enough to raise concern for the health
             of both humans and wildlife (from San Francisco Bay RMR May et al., 2000).
      National Coastal Condition Report

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                                                                     Chapter 6    West Coastal Condition
Pablo Bay are more contaminated than other
Bay sites. Of the contaminants measured by the
RMP, mercury, PCBs, diazinon, and chlorpyrifos
are of the highest concern, followed by copper,
nickel, zinc, DDT, chlordane, dieldrin, dioxins,
and PAHs. In 2000, the RMP initiated an
intensive characterization of the water quality,
sediments, and biota of the estuary with EPA.
One hundred eighty locations will be
examined during this characterization.

Puget Sound
(Northern Sound Only)

  Washington's Department of Ecology
(WDOE— http://www.ecy.wa.gov) and the
Puget Sound Ambient Monitoring Program
(PSAMP—http://www.wa.gov/puget_sound/
Programs/PSAMP.htm) have been monitoring
Puget Sound using fixed stations since 1989
and using probabilistic sites for the benthic
triad since 1997. The PSAMP monitoring
effort (1989-1995)  sampled 34 sites annually
and 42 additional sites on a 3-year rotational
basis. Sediments were analyzed to determine
the extent of chemical contamination,
sediment toxicity, and the structure of
macroinvertebrate communities. In 1997,
WDOE, jointly with NOAA, examined the
bioeffects associated with toxicants in Puget
Sound with 100 sites sampled annually using
a stratified random sampling approach. This
monitoring effort was divided into three
1-year efforts—north Puget Sound (1997)
(Figure 6-16), mid-Puget Sound (1998),
and south Puget Sound (1999) (Figure 6-17).
Results from the north Puget Sound have
been completed (Long et al., 1999), and results
from the remaining areas will be completed
by 2001.
 Marine
 Sediment
 Monitoring
 Stations
 Northern
 Range
 • CORE
 X ROTATIONAL
 • LONG TERM
Figure 6-16. Marine sediment monitoring stations in the
northern range of Puget Sound.
 Marine
 Sediment
 Monitoring
 Stations
 Middle and
 Southern Range
 • CORE
 X ROTATIONAL
 • LONG TERM
   70

Figure 6-17. Marine sediment monitoring stations in
mid-Puget Sound and south Puget Sound.
                                                                   National Coastal Condition Report

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Chapter 6
West Coastal Condition
         In 1999-2000, the WDOE, in conjunction
       with EPA and NOAA, resampled a subset
       of the 1997-1999 Puget Sound sites and
       approximately 40 additional sites to examine
       water quality, fish community structure, and
       tissue residues. In addition, in 1999, WDOE
       sampled 50 non-Puget Sound sites throughout
       coastal Washington to examine water quality,
       sediment quality, and biotic conditions. These
       data will be available in 2001-2002.
            Water Clarity
         The water clarity data available for Puget
       Sound are not included in this report due
       to differences in the sampling design used
       to collect the data. These data are not
       comparable to the data used to establish
       indicators for other coastal regions
       throughout the report.
             Dissolved  Oxygen
         The dissolved oxygen data available for
       Puget Sound are not included in this report
       due to differences in the sampling design used
       to collect the data. These data are not
       comparable to the data used to establish
       indicators for other coastal regions throughout
       the report
                                                   Sediment Contaminants
                                               The condition of Puget Sound as measured
                                             by sediment contaminant concentrations is
                                             good. Chemical analyses of sediments at these
                                             sites indicated a relatively wide range of
                                             concentrations across the sampled area.
                                             However, only a small proportion of the
                                             samples had elevated concentrations of
                                             pesticides/PCBs (Figure 6-18). Overall,
                                             chemical concentrations were highest in
                                             sediments from the two most urbanized
                                             embayments in northern Puget Sound—
                                             Everett Harbor and Bellingham Bay. This
                                             pattern was evident for several trace metals
                                             and two classes of PAHs. Lower concentrations
                                             of PAHs (greater than ERL) were found in
                                             Fidalgo Bay.
                                                                     Pesticides/PCBs
                                                                                 kO.I%>ERM
                                                 99.9% < ERM
                                                               Metals
                                                            98.8% < ERM
                                                                       !.2%>ERM
                                                                          PAHs
                                                            99.9% < ERM
                                                                                  0.1% > ERM
                                                                Fair   Poor
                                                        Figure 6-18. Sediment concentration in Northern Puget
                                                        Sound.
      National Coastal Condition Report

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                                                                   Chapter 6   West Coastal Condition
      Benthic Condition
  Benthic index scores in Puget Sound are
generally very good, with only isolated pockets
of degraded conditions. Benthic community
composition indicated a wide variety of
abundance and diversity throughout the
100 sampling locations. Several indices of
benthic structure showed strong relationships
to sediment contaminant concentrations and
sediment toxicity.
  Results from four sediment toxicity tests
using macroinvertebrate survival rates
indicated that a very small proportion (5%)
of the northern Puget Sound survey area was
highly toxic. Everett Harbor showed the
greatest toxicity. Drayton Harbor, Whatcom
Waterway, portions of Bellingham Bay, inner
Padilla Bay, March Point, Fidalgo Bay, Port
Susan, and Port Gardner showed less severe
sediment toxicity.
      Fish Tissue Contaminants
  The fish tissue contaminant data available
for Puget Sound are not included in this
report due to the differences in the sampling
design used to collect the data. These data are
not comparable to the data used to establish
indicators for other coastal regions throughout
the report.
Assessments and
Advisories

Clean Water Act  Section 305(b)
and 303(d) Assessments
  The states on the West Coast assessed
3,413 (83%) of their 4,118 estuarine square
miles for their 1998 305(b) reports. Of the
assessed estuarine miles on the West Coast,
32% fully support their designated uses, 1%
are threatened for one or more uses, and 67%
are impaired by some form of pollution or
habitat degradation (Figure 6-19). Individual
use support for the West Coast estuaries is
shown in Figure 6-20.
          Fully
        Supporting
          32%
                                                      Threatened
                                                         1%
                             Impaired
                               67%
                                                           Fair
                                                                 Poor

   Figure 6-19. Water quality in assessed West Coast
   estuaries (U.S. EPA).
                                                                 National Coastal Condition Report

-------
Chapter 6    West Coastal Condition

3,000 -

2,500 -
in

-------
                                                                                 Chapter 6     West Coastal Condition
               900
               800-
               700-
Fully Supporting

Threatened

Impaired
                     Aquatic Life
                       Support
       Fish
  Consumption
Shellfishing
 Primary
Contact -
Swimming
Secondary
 Contact
                                                  Designated Use
      Figure 6-22. Individual use support for assessed shoreline on the West Coast (U.S. EPA).
   There are 340 waters on the West Coast
that are listed as impaired under Section
303(d) of the Clean Water Act. The percentage
                        of listed waters impaired by each of the major
                        pollutant categories is shown in Figure 6-23.

                                        1998 303(d) Impairments for the West Coast

                                             Listed Miles                  Listed Area

                                                                 Pesticides

                                                                  Mercury

                                                            Toxics/Organics

                                                             Toxics/Metals/
                                                                 Inorganics

                                                                 Pathogens

                                                                 Nutrients

                                                             Sedimentation I 2%

                                                                        0     50    100

                                                                        Percent Impaired
                                                                           Square Miles
Pesticides
Mercury
Toxics/Organics
Toxics/Metals/
Inorganics
Pathogens
Nutrients
Sedimentation
'v
|25%
]7%
|s%
^12%
^|l9%
]6%
|50%
3 50







100
Percent Impaired
b Miles

|82%

|77%




]s%
• 18%
2%
|82%

|99%

    Figure 6-23. 303(d) listed waters on the West Coast and the percentage of listed waters impaired by the major
    pollutant categories (note that a listing may be impaired by multiple pollutants)  (U.S. EPA).
                                                                               National Coastal Condition Report

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Chapter 6
West Coastal Condition
       State Fish Consumption Advisories
         There were 43 fish consumption advisories
       active in 2000 for the estuarine and coastal
       waters of the West Coast (Figure 6-24). Only
       9.5% of the coastal miles were under advisory,
       with half of these miles located in southern
       California and the other half coastal shoreline
       in Washington's Puget Sound. A total of 29.8%
       of the estuarine square miles of the West Coast
       was under advisory in 2000, and all of the
       estuarine area under advisory was located
       within the San Francisco Bay/Delta region or
       within Puget Sound. None of the West Coast
       states (California, Oregon, or Washington)  had
       statewide coastal advisories in  effect in 2000.
       Oregon did not list any fish consumption
       advisories for estuarine or coastal waters.
         There were 13 different contaminants or
       groups of contaminants responsible for West
       Coast fish advisories in 2000, and 10 of those
       contaminants (representing 32% of advisories)
       were listed only in the waters of Puget Sound
                                                and bays emptying into the Sound (dioxins,
                                                chlorinated pesticides, creosote, industrial
                                                and municipal discharge, metals, PAHs,
                                                pentachlorophenol, tetrachloroethylene,
                                                vinyl chloride, and VOCs). PCBs in California
                                                and Washington were responsible for 35%
                                                of advisories (Figure 6-25). Twelve advisories
                                                for DDT (28%), all in California, were active
                                                in 2000.
                                                                  Dioxins
                                                                    2%
                                                                 Other
                                                                  30%
                                                                            Mercury
                                                                              5%
                                                 Figure 6-25. Contaminants responsible for fish consumption
                                                 advisories in the waters of the West Coast in 2000 (U.S. EPA
                                                 NLFWA, 2000c).
            Puget Sound	-*
      San Francisco Bay
                                     Number of
                                     Advisories per
                                     USGS Cataloging
                                     Unit
                              I
                              2-4
                              5-9
                              No Advisories
                                                The following species were under advisory in at least some
                                                part of the coastal waters of the West Coast in 1999:
                                                Kelp bass        White croaker       Sculpin
                                                Striped bass      Black croaker       Shark
                                                Bullhead        Gobies            Shellfish
                                                Corbina         Queenfish         Crab
                                                Croaker         Rockfish           Surfperch
     Figure 6-24. The number offish consumption advisories per
     USGS cataloging unit for the West Coast (U.S. EPA NLFWA,
     2000c).
      National Coastal Condition Report

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                                                                        Chapter 6    West Coastal Condition
Classified  Shellfish-Growing Waters
  On the West Coast, 423,000 acres (2% of
the national total) of shellfish waters were
classified for shellfish harvest in 1995. Of those
classified, 49% were approved and 51% were
harvest-limited. Nationally, the West Coast
ranks last in the total amount of classified
waters, with only 29% of the waters classified,
as shown  in Figure 6-26. Of the classified
acreage, 84% is located in estuarine waters and
16% in nonestuarine waters. The top three
pollution  sources affecting harvest limitation
are upstream sources, agricultural runoff, and
individual wastewater treatment systems.
  The top three shellfish species (rated high
or medium in abundance) on the West Coast
are softshell clams (55,625 acres), Pacific
oysters (42,212 acres), and native littleneck
    Unclassified
       71%
Prohibited 9%
Restricted 2%
Conditionally
Approved 4%
Approved
   14%
  Good
         Fair
               Poor
Figure 6-26. The majority of shellfish-growing waters on the
West Coast were unclassified (1995 National Shellfish Register;
NOAA, 1997).
                     clams (25,049 acres). Softshell clams are found
                     at high or medium relative abundance in 13%
                     of the region's shellfish-growing waters, Pacific
                     oysters  in 10%, and native littleneck clams in
                     6%. Eighty-seven percent (48,575 acres) of
                     softshell clams, 13% (5,607 acres) of Pacific
                     oysters, and 24% (6,069 acres) of native
                     littleneck clams are located in waters that
                     do not allow direct harvesting (i.e., restricted,
                     conditionally restricted, and/or prohibited).
                        Total acreage of approved waters decreased
                     from 52% in 1990 to 49% in 1995. Both
                     Oregon and Washington reported increases
                     in the total amount of classified acreage; how-
                     ever, the biggest change occurred in California,
                     where total classified acreage decreased from
                     130,000 acres in 1990 to 24,000 acres in 1995.

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Chapter 6
West Coastal Condition
       Beach  Closures
         Of the three West Coast states, only
       California and Washington submitted beach
       monitoring and closing information to EPA in
       1999. Ninety-eight percent of the West Coast
       beaches reporting are in California. There is
       no regular water quality monitoring of ocean
       and bay recreational beaches for swimming or
       for other water contact activities in Oregon.
         Of 243 beaches in California that reported
       information to EPA, 59  (24%) were closed at
       least once during 1999. The  two counties with
       50% of the closed beaches were San Diego and
       Los Angeles Counties (Figure 6-27).
         All but five of the California beaches
       responding to EPA's survey reported the
       existence of beach monitoring programs in
       1999. Beach closings were primarily the  result
       of sewage and elevated bacteria levels caused
       by pipeline breaks and storm water or other
       unknown causes.
                                           Kids experience the fun of body boarding in the surf of the Gulf
                                           of the Farallones Sanctuary (Photo: Gulf of the Farallones NMS).
                                 Percentage of
                                beaches closed
                                  per county:
                                    0-10
                                    I I-SO
                                    51 -100
                                    No Data
                                    Available
                                    Beach Closure
                                    in 1999
                                                  Washington did not report monitoring
                                               information for any beaches in 1998. However,
                                               in 1999, Washington reported the existence of
                                               water quality monitoring programs for five
                                               beaches. None of these beaches experienced
                                               closures in 1999.
       Figure 6-27. Percentage of beaches, of those reporting to
       EPA, that were closed at least once in 1999.
      National Coastal Condition Report

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                                                                 Chapter 6    West Coastal Condition
Summary
                       Based on available data, ecological conditions in western
                     estuaries are fair (Figure 6-28). Although currently data are
                     not available for all estuarine systems, consistent information
                     throughout western estuarine systems (like that shown earlier for
                     East Coast and Gulf of Mexico estuaries) will be available in 2002.
                     The available data indicate that the primary problem in western
                     estuaries and the Southern California Bight in the 1990s is
                     sediment contamination. Over 25% of sediments are enriched
                     or exceed ERL/ERM guidelines. While problems with sediment
                     contamination are decreasing, the potential for benthic community
                     degradation and fish contamination in selected estuaries is
                     increasing. Concentrations of contaminants in fish tissue in some
                     western estuaries are elevated, creating poor conditions. Dissolved
                     oxygen conditions (except in some isolated regions of Puget
                     Sound) and water clarity are considered good for western estuaries.
                     Contaminant concentrations in fish tissue, benthic community
                     condition, and eutrophic condition are fair in these estuaries but
                     appear to be worsening. Clearly, this is a region of the country
                     where increasing population pressures (particularly in the Seattle-
                     Tacoma region, San Francisco Bay, and southern California)
                     require continued environmental awareness and programs to
                     correct existing problems and to ensure that environmental
                     indicators in fair condition do not worsen.

                        Overall
                        West
                        ood   Fair
Poor]
                          Water Clarity
                          Dissolved Oxygen

                          Coastal Wetlands
                          Eutrophic Condition

                          Sediment
                          Benthos

                          Fish Tissue
                     Figure 6-28. Overall ecological condition
                     of estuaries on the West Coast.
                                                               National Coastal Condition Report

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                                                                  Francisco
                                                                   P*
         San  Francisco Bay Estuary Project
         http://www.abag.ca.gov/bayarea/sfep
            The San Francisco Bay-Delta Estuary is a rich and treasured resource. It is the
         largest estuarine system on the west coasts of North and South America and includes
         the waters of San Francisco Bay, San Pablo Bay, Suisun Bay, and the Sacramento-San
         Joaquin River Delta. The Estuary drains over 40% of California's land, provides
         drinking water to two-thirds of California's  34 million people, and irrigates
         4.5 million acres of farmland and ranches.
            Because of its highly dynamic and complex environmental conditions, the estuary
         supports an  extraordinarily diverse and productive ecosystem. Half of the birds
         migrating along the Pacific Flyway use the estuary's wetlands for wintering. In
         certain seasons, the estuary's mudflats and saltflats support more than 1 million
         shorebirds. Hundreds of thousands of native and hatchery-bred salmon migrate
         through the  Bay-Delta waters on their way to spawning grounds upriver. The Bay-
         Delta also supports many important economic  activities including commercial and
         sport fishing, shipping, industry, agriculture, recreation, and tourism.
            The San Francisco Bay-Delta Estuary has been described as the major estuary
         in the United States most modified by human activity. The San Francisco Estuary
         Project (SFEP) was created by EPA's National Estuary Program to develop a more
         coordinated approach to dealing with the estuary's varied management issues such
         as intensified land use, decline of biological  resources, freshwater diversions, and
         altered flow  regime. The SFEP has enacted a long-term management plan calling
         for stronger  planning, improved regulation, and increased acquisition and
         restoration of wetlands in the Bay area.
            Since its inception, the SFEP has developed a network of demonstration projects
         for watershed protection and is fast  growing into a model of how to make local
         actions have regional impact. The most notable improvements include declining
         rate of wetland loss, reduced pollutant loads of municipal and industrial sources,
         and improved regulation of dredging. Over  26,000 acres of wetlands have been
         acquired and over 28,000  acres of wetlands restored since 1993. Urban expansion,
         however, continues to deplete the stock of valuable upland wildlife habitats,
         wetlands, and riparian areas and to increase loadings of many point and nonpoint
         pollutants. Population growth fuels the increasing demand for fresh water. Water
         development projects continue to influence the estuary's primary productivity
         and habitat quality and to adversely affect populations of valuable commercial
         and sport fish and other species.
National Coastal Condition Report

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                                                             Chapter 6    West Coastal Condition
Northwest Indian Fisheries
Commission

  During the past 2 decades there has been a
steady decline of many wild salmon stocks           http://www.nwifc.wa.gov
originating from Puget Sound and the Washington coast, brought about in part by
the loss of critical wild salmon spawning and rearing habitat. As a result of the
decline in wild salmon stocks, in 1999 the National Marine Fisheries Service listed
Puget Sound chinook salmon, Lake Ozette sockeye, and Hood Canal summer chum
stocks as "threatened" under the federal Endangered Species Act (ESA).
  The Northwest Indian Fisheries Commission (NWIFC), an organization of the
treaty Indian tribes in western Washington, responded to the salmon ESA listings by
intensifying their watershed recovery efforts through the state/tribal cooperative
Wild Stock Restoration Initiative (WSRI) program. The aim of the effort is to
inventory local salmon stocks and habitat, then develop guidelines to restore the
most critical stocks and habitats. Indian tribes and the Washington Department of
Fish and Wildlife (WDFW) have cooperatively developed a joint assessment of the
status of salmon and steelhead stocks in Washington State in response to concerns
about declining populations.
  The tribes and WDFW created the Wild Stock Restoration Initiative in 1991 in
response to wild salmon and steelhead stock concerns. The following approach was
established to address wild stock status and recovery:
  • Inventory status of stocks and their habitat
  • Review management strategies (harvest, habitat, and hatcheries)
  • Develop recovery and management plans
  • Monitor  and evaluate.
  Tribal, state, and federal governments and their fisheries managers realize the need
for a more focused approach to protect, restore, and manage this resource. Fisheries
managers have responded to salmon declines with historic cutbacks in fisheries—as
much as 80%  in the last decade. But fishery closures and reductions have resulted in
severe economic hardship for tribal fishermen on reservations, where unemployment
runs as high as 80%.
                                                           National Coastal Condition Report


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Chapter
         Great Lakes
         Coastal
         Condition

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Chapter 7
            Great Lakes
            Coastal  Condition

                                                   Based on
                                                   available information
                                                   from various
                                                   monitoring efforts,
                                                   ecological conditions
                                                   in the Great Lakes are
                                                   borderline poor
                                                   (Figure 7-1). The
                                                   open waters of the
                                                   approximately
                                                   290,000 square miles
                                                   of the Great Lakes are
                                                   monitored annually
             by EPA's Great Lakes National Program Office (GLNPO), in
             conjunction with NOAA and USGS. A fixed site design has been used to
             characterize water quality and, in recent years, the composition of the
             phytoplankton, zooplankton, and benthic communities. The limnology
             (lake science) program provides information on key environmental
             factors that influence the aquatic ecosystem of the Great Lakes. Annual
             monitoring began in 1983 for Lakes Michigan, Huron, and Erie; in 1986
             for Lake Ontario; and in 1992 for Lake Superior (Figure  7-2). The
             sampling strategy is to collect water and biota samples at specific water
             depths from a select set of locations in each lake twice a year. The
             limnology program focuses on the open lake basins (water greater than
             98 feet in depth and greater than 3 miles from shore). At key stations,
             and as part of special studies, sediment samples are taken as well. For
             known or suspected problem areas, such as the Great Lakes Areas of
             Concern, sampling is also performed in the nearshore zone. This zone
             includes numerous bays and rivers connecting the lakes.
 National Coastal Condition Report

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                                                                                    Chapter 7     Great Lakes Coastal Condition
                                                                       Overall
                                                                     Great Lakes
                                                                     | Good
                                           Fair
                                                  Poo
                                                                          Water Clarity

                                                                          Dissolved Oxygen

                                                                          Coastal Wetlands

                                                                          Eutrophic Condition

                                                                          Sediment

                                                                          Benthos

                                                                          Fish Tissue
                                                          Figure 7-1.  Overall
                                                          condition of the Great
                                                          Lakes as measured by
                                                          the seven indicators.
                      Green Bay

                       Manitowoa
                       Sheboygan

                       Milwaukee
      Ludington
               Bay City
                Port Huro
        Muskegon
  O   1         Detroit
oo
   O
    Duluth
                                                              Figure 7-2. Monitoring
                                                              stations used by the Great
                                                              Lakes Limnology Program.
• Master Stations
O Surveillance Stations
• Cities
                           Chicago

Probabilistic surveys like those completed
for the Northeast, Southeast, and Gulf Coasts
do not exist for the Great Lakes region.
Therefore, spatial estimates of ecological
condition consistent with those calculated
in earlier chapters cannot be determined.
However, existing monitoring data from long-
standing programs have been used to assess
ecosystem condition to the extent possible.
  Fishing from the Great Lakes
  shore (Courtesy of USDA Natural
  Resources Conservation Service).
                                                                                        National Coastal Condition

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Chapter 7
Great Lakes Coastal Condition
       Coastal Monitoring Data
                                                       Coastal Wetland Habitat Loss
            Water Clarity
         Water clarity in the Great Lakes is good.
       Water clarity, as measured by a Secchi disc, has
       increased in all lakes except Lake Erie over the
       last decade. Lake Ontario Secchi disc depths
       have increased nearly 100%. In Lake Ontario,
       for example, light penetration has increased
       from 3.1 meters (pre-1990 measurements) to
       6.7 meters (post-1990 measurements).
             Dissolved Oxygen
         Dissolved oxygen conditions in the
       Great Lakes are generally good. However,
       dissolved oxygen in Lake Erie continues to be
       a persistent problem. Anoxic conditions (less
       than 0.5 mg/L) often occur in late August and
       continue until turnover occurs in fall.
       Although the frequency and extent of oxygen
       depletions have decreased considerably from
       the 1970s and 1980s, that trend leveled off in
       the late 1990s.
             Coastal Wetland  Loss
         During the 200-year period between the
       1780s and the 1980s, 51% of wetlands in the
       Great Lakes area were lost (Figure 7-3). The
       largest reductions were observed in Ohio
       (90%) and the smallest in Minnesota (42%).
             Eutrophic Condition
         The Great Lakes were not included in
       NOAA's National Estuarine Eutrophication
       Assessment, so data similar to those used in
                                              „ 100
                                              3
                                              I 8°
                                              < 60
                                              J> 40
                                                                    90
                                                   New  Ohio  Michigan Indiana Illinois Wisconsin Minnesota Great
                                                   York                              Lakes
                                             Figure 7-3. Percent wetland habitat loss from 1780 to 1980
                                             by state and for the Great Lakes overall (Dahl, 1990;Turner
                                             and Boesch, 1988).

                                             previous chapters to assess eutrophic
                                             condition are not available. However,
                                             chlorophyll a concentrations (a symptom of
                                             eutrophication potential) are stable
                                             throughout the lakes with the exception of the
                                             central and western basins of Lake Erie.
                                               Data are also available for nutrient input
                                             into the Great Lakes. Nitrate and silica
                                             continue to increase in all lakes. Phosphorus
                                             concentrations have stabilized in all lakes
                                             with the exception of Lake Ontario, where
                                             phosphorus continues to decline at a slow rate
                                             of 0.3 mg/L per year. Only Lake Erie exceeds
                                             the phosphorus objectives set by the United
                                             States and Canada (15 mg/L), by about 60% in
                                             the western basin and by about 10% to 20% in
                                             the central and eastern basins. Input of
                                             chloride compounds from human activities
                                             (brines, road salt, etc.) has resulted in
                                             increased chloride concentrations in the Great
                                             Lakes. The rate of increase is  slow (0.1 mg/L
                                             per year) in Lakes Michigan, Huron, and
                                             Superior (Figure 7-4), and it is decreasing
                                             from previously elevated levels in Lakes Erie
                                             and Ontario. Overall water quality in Lakes
                                             Superior, Michigan, and Huron is good, with
                                             elevated chloride levels being observed in
                                             Lake Ontario and elevated phosphorus
                                             concentrations observed in Lake Erie.
      National Coastal Condition Report

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                                                                            Chapter 7     Great Lakes Coastal Condition
               Predicted Adjusted Chloride Concentration
                           for the Years 1975-2000
oc
3 ^
•Bb
E on -
to
*-M
rt I c

_^^_
^^^^^^^*
Lake Erie
^^S**"^^!! l^^^^ti^K ^r

Lake Michigan -.-. '» "
Lake Huron —^
Lake Superior _%

i i i i i i i i i i i i i i i i i i i i i i i i
75 1980 1985 1990 1995 2C
Estimated Chloride Loads
Lake kg/day ton/yr
c c
Superior 7.76(1 Ob) 2.84(1 Ob
Michigan 2.46(1 06) 9.01 (IOS
Huron 1 18(10^) 431(10"*

Erie 4.63(1 06) I.69(I06
Ontario 5.05(1 06) I.84(I06

Error bars indicate data for years
1983-1993,+! standard deviation.
Dashed lines indicate predicted values.
Solid lines indicate actual values.

00
                                 Time (year)
Figure 7-4.  Predicted chloride concentrations in the Great Lakes from 1975 to 2000.

                         Photo: ® JohnTheilgard
                                                                               National Coastal Condition Report

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                                                       http://www.GLIFWC.org
Great Lakes  Indian Fish and
Wildlife Commission  Issues
Fish Consumption Information
for Tribal Members

  Eleven sovereign tribal governments,
located in Minnesota, Wisconsin, and
Michigan, make up the Great Lakes Indian
Fish and Wildlife Commission (GLIFWC).
The Commission's purpose is to protect and
enhance treaty-guaranteed fishing on the
Great Lakes and inland territories ceded
under the Chippewa treaties and to provide
cooperative management of these resources.
  As part of its responsibilities, the GLIFWC publishes booklets and reports to
inform tribal members of the health benefits and risks of consuming fish caught
in the wild. Eating a diet rich in fish offers many health benefits, including the
prevention of heart disease by regular consumption of omega-3 fatty acids found
in fish. Consuming fish can also be potentially harmful because of the levels of
contaminants such as mercury that are found in fish from some Great Lakes areas.
  The GLIFWC website (www.GLIFWC.org) provides access to reports, pamphlets,
and maps to help tribal members decide where to fish, how much fish to eat, and
what types of fish to eat. For example, the GLIFWC has developed maps of mercury
contamination in walleye for a number of different fishing areas. The maps, which
are  available on the website and in seasonal publications from the GLIFWC, indicate
the  locations where walleye of certain sizes may contain harmful  levels of mercury.
The publications  also issue specific advice for sensitive subpopulations, such as
women of childbearing age and children under age 15, who are more susceptible
to harm from contaminants.
National Coastal Condition Report

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                                                       Chapter 7   Great Lakes Coastal Condition
The  International
Joint Commission

  Formed under the 1909 Boundary Waters
Treaty, the International Joint Commission (IJC)
acts as an objective advisor to both the United
States and Canada in the management of
transboundary waters. IJC is involved in issues
affecting all transboundary waters including the
Columbia River Basin, Red River Basin, and
Great Lakes/St. Lawrence River Basin. The IJC
provides a comprehensive  assessment every
2 years of progress made to meet the goals set in
the 1978 Great Lakes Water Quality Agreement
(GLWQA). It accomplishes this through the
actions of several councils, including the
Great Lakes Science Advisory Board, Great Lakes
Water Quality Board, and Council of Great Lakes
Research Managers. The IJC releases biennial
reports on the progress of the parties in meeting
the terms of the Agreement; these are followed
up by review meetings called by the parties to
undertake actions under the terms of the
Agreement. Additionally, the Annex 2 Advisory
Committee provides guidance and review of
Remedial Action Plans (RAPs) and Lakewide
Management Plans (LaMPs) developed
under GLWQA.
  International Joint Commission
  Commission mixte Internationale
Members of the International
Joint Commission
• Annex 2 Advisory Committee
• Council of Great Lakes
  Research Managers
• Great Lakes Science Advisory
  Board
• Great Lakes Water Quality
  Board
• International Lake
  Champlain Board of Control
• International Lake Superior
  Board of Control
• International Niagara Board
  of Control
• International St. Lawrence
  River Board of Control
•  International Air Quality
  Advisory Board

                                                          National Coastal Condition Report

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Chapter 7
Great Lakes Coastal Condition
              Sediment  Contaminants
          EPA's Great Lakes National Program
       Office has determined that polluted sediments
       remain as the largest major source of
       contaminants to the Great Lakes food chain.
       Under the Great Lakes Water Quality
       Agreement, the governments of the United
       States and Canada identified 43 Areas of
       Concern having significant  impairments of
       beneficial use (Figure 7-5). Over 2,000 miles
       (20%) of the shoreline are considered
                                                   impaired because of sediment contamination,
                                                   and fish consumption advisories remain in
                                                   place throughout the Great Lakes. On the
                                                   U.S. side of the border, sediments have been
                                                   assessed at 26 Great Lakes locations, and over
                                                   1.3 million  cubic yards of contaminated
                                                   sediments have been remediated over the past
                                                   3 years. However, the challenge is so great
                                                   that sediment remediation has so far been
                                                   completed at only 1 of the 43 Areas of
                                                   Concern.
                                                                         Areas Receiving or Awaiting Remediation for
                                                                         Sediment Contamination in the Great Lakes
                           12
                                                                         Awaiting Remediation
                                                                        2. Torch Lake               35.
                                                                           Deer Lake               36.
                                                                           Muskegon Lake            37.
                                                                           White Lake              38.
                                                                           Clinton River             39.
                                                                           Cuyahoga River            41.
                                                                           Ashtabula River            42.
                                                                           Presque Isle Bay           43.
                                                                           Eighteen Mile Creek        44.
                                                                           Rochester Embayment       45.
                                                                           Oswego River            46.
                                                                                        Bay of Quinte
                                                                                        Port Hope
                                                                                        Metro Toronto
                                                                                        Hamilton Harbour
                                                                                        Wheatly Harbour
                                                                                        Severn Sound
                                                                                        Spanish River Mouth
                                                                                        Peninsula Harbor
                                                                                        Jackfish Bay
                                                                                        Nipigon Bay
                                                                                        Thunder Bay
                                                                         Some Remediation Completed
                                                                        13.
                                                               St. Louis River             17.
                                                               St. Mary's River            18.
                                                               Manistique River Harbor      21.
                                                               Menominee River           22.
                                                               Fox River                23.
                                                               Sheboygan River/Harbor      24.
                                                               Milwaukee Estuary          25.
                                                               Waukegan Harbor          29.
                                                               Grand Calumet River/       30.
                                                                Indiana Harbor           34.
                                                               Kalamazoo River
                                                                       • Remediation Completed
                                                                       40.  Collingwood Harbour
       Figure 7-5. Great Lakes Areas of Concern receiving or awaiting remediation for sediment contamination.
Saginaw River
St. Clair River
Rogue River
Detroit River
River Raisin
Maumee River
Black River (Ohio)
Buffalo River
Niagara River
St. Lawrence River
      National Coastal Condition Report

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                  Chapter 7    Great Lakes Coastal Condition
      Benthic Condition
  The condition of the Great Lakes according
to benthic indices is poor. Benthic invertebrate
communities were sampled during the
summers of 1997 and 1998 (Figure 7-6). Deep
water sites in the Great Lakes support
relatively taxa-poor benthic assemblages. Lakes
Superior, Michigan, Huron, and Erie support
fairly distinct benthic communities with
significant similarity among sampling sites
within each lake. In contrast, Lake Ontario
benthic assemblages varied greatly from site to
site. Recent studies undertaken in cooperation
with NOAA and others have revealed
precipitous declines in populations of certain
benthic invertebrates, particularly a small
shrimp-like crustacean (Diporeia spp), which
resides at the base of the benthic food chain.
Diporeia populations in Lake Michigan, for
example, have plummeted in all 10 sites
sampled; further studies are under way to
identify the causes.
  Much more data are available for biotic
communities sampled in open water in the
Great Lakes. Diatom  collections were
completed in all five lakes in the spring and
summer of 1998 (Figure 7-7). Diatoms are
used in the Great Lakes monitoring as an
overall indicator of ecological condition.
Phytoplankton populations in spring were
overwhelmingly dominated by centric
diatoms with the exception of Lake Superior.
Within-lake communities were relatively
homogeneous with the exception of Lake Erie.
Both diatom dominance and species richness
decreased in the summer, as would be
expected. Zooplankton surveys were
completed in conjunction with the diatom
Figure 7-6. Sites sampled for benthic invertebrates in 1997 and 1998.

Figure 7-7. Sampling stations used for diatom collection in 1998.

      sampling. Zooplankton represent an indicator
      of primary consumers in Great Lakes food
      chains and are food items for many fish
      species. Unlike phytoplankton communities,
      zooplankton communities exhibited very low
      species richness  in the spring throughout the
      Great Lakes. All  lakes were dominated by
      copepods with abundances and species
      richness increasing through the summer
      months.
                     National Coastal Condition Report

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Chapter 7
Great Lakes Coastal Condition
         Invasion of the lakes by the zebra mussel
       (Dreissena polymorpha) in the 1980s has
       dramatically altered the food web of the Great
       Lakes and considerably altered the community
       composition of phytoplankton, zooplankton,
       and benthos, favoring some fish species at the
       expense of others and changing the pathways
       and impacts of bioaccumulative contaminants.
       Populations of certain lesser-known invertebrate
       invaders, such as the spiny water flea
       (Bythotrephes  cederstroemi) and the fishhook
       flea (Cercopagis pengoi), are also burgeoning in
       some locations, with Cercopagis outnumbering
       all other zooplankton species in specific parts
       of Lake Ontario in a 1999 survey. These
       species both compete with and prey upon
       native zooplankton, while serving as less
       desirable forage for most Great Lakes fish.
         Overall, the condition of phytoplankton,
       zooplankton, and benthic communities in the
       Great Lakes varies considerably from lake to
       lake and within each lake. Lake Superior
       appears healthy and diverse,  in part because of
       its upstream location and because it is too
       cold to favor certain invading organisms, such
       as the zebra mussel. The condition of the
       biotic communities of the lower four lakes is
       more mixed. More information on Great Lakes
       National Program Office  (GLNPO) indicators
       is available on the Internet:
       http://www.epa.gov/glnpo/monitor.html.
                                                   Fish Tissue  Contaminants
                                               The condition of the Great Lakes as
                                             measured by fish tissue contaminants is poor,
                                             although levels of contaminants in fish and
                                             wildlife have declined dramatically from peak
                                             levels in the 1970s and 1980s. Chemical
                                             contamination resulting in fish consumption
                                             advisories is one of the greatest environmental
                                             problems in the Great Lakes.

                                               In summary, the overall condition of the
                                             Great Lakes has improved dramatically despite
                                             local occurrences of sediment contamination
                                             and lake-by-lake fish advisories. However,
                                             ecological conditions of the Great Lakes are
                                             still in question as the continuing impacts of
                                             invasive species  are sorted out. The success of
                                             efforts to remediate sediments in these areas
                                             will continue to be realized in further
                                             reductions  in fish tissue contaminant
                                             concentrations—although advisories are still
                                             in effect throughout the lakes. Substantial
                                             challenges remain and conditions must be
                                             measured periodically to ensure that
                                             improvement continues. Programs like the
                                             multiagency Coastal Monitoring and Research
                                             Strategy (part of the Clean Water Action Plan)
                                             and Coastal 2000 will support GLNPO in
                                             providing this continuing surveillance.
      National Coastal Condition Report

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                                                            Chapter 7   Great Lakes Coastal Condition
Assessments and Advisories

Clean Water Act Section 305(b)
and 303(d) Assessments
  The Great Lakes states assessed 4,950 miles
(90%) of their 5,521 miles of Great Lakes
shoreline for their 1998 305(b)water quality
reports. Only 2% of the assessed shoreline
waters fully support their designated uses, 2%
are threatened for one or more uses, and the
remaining 96% are impaired by some form of
pollution or habitat degradation (Figure 7-8).
Individual use support for Great Lakes
shoreline is  shown in Figure 7-9.
                                                               Fully Supporting
                                                 Threatened    .	 2%
                                                       t5
                                                                 ^^ Impaired
                                                                       96%
                                                        Fair   Poor
                                                     Figure 7-8. Water quality for assessed Great
                                                     Lakes shoreline (U. S. EPA).
   in
   
-------
Chapter 7
Great Lakes Coastal Condition
         The states reported the following individual
       use support for their assessed estuarine
       and coastal waters (Table 7-1). Figure 7-10
       shows the leading pollutants that cause use
       impairments.
    Table 7-1. Individual Use Support for Assessed Coastal
    Waters Reported by States on the Great Lakes under
    Section 305(b) of the Clean Water Act
     Individual
     Uses
      Shoreline Assessed
        as Impaired (mi)
    Aquatic Life
             210
     Fish
     Consumption
           4,747
    Swimming
             101
    Agriculture
of Total Shore-
line Assessed
    12%
    96%
     3%
Secondary
Contact
Drinking
Water
41
80
1%
2%
State Fish  Consumption Advisories
  Fishing in the Great Lakes area is a way
of life and a valued recreational and
commercial activity for many people. To
protect their citizens from the risks of eating
contaminated fish, the eight states bordering
the Great Lakes had a total of 32 fish
consumption advisories in effect in 2000 for
waters of the lakes and the connecting waters.
Every Great Lake was under at least one
advisory, covering 100% of the U.S. coastline
(Figure 7-11). Michigan, which borders four of
the five Great Lakes and encompasses four of
the six connecting waterbodies, issued the
greatest number of advisories (eight).
  Great  Lakes fish consumption advisories
were issued for a total of five pollutants:
mercury, mirex, chlordane, dioxins, and PCBs.
                  1998 305(b) Impairments
                for the Great Lakes Shoreline
Metals h 3%
Oxygen-Depleting — I .„,
Substances — 1
Pathogens (Bacteria) H 4%
Nutrients

Pesticides
Priority Toxic

| 5%
I 21%

|2I%

|29%

D IS 30
            Figure 7-10. The leading pollutants that cause
            use support impairment of assessed Great Lakes
            shoreline (U.S. EPA).
                                                                           Number of
                                                                           Advisories per
                                                                           USGS Cataloging
                                                                           Unit
                                                                    I
                                                                    2-4
                                                                    5-9
                                                                    No Advisories
                                                          Figure 7-11. 100% of U.S. Great Lakes shoreline was under
                                                          fish consumption advisory in 2000.
      National Coastal Condition Report

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                                                                        Chapter 7    Great Lakes Coastal Condition
     Most of the advisories (48%) were issued for
     PCBs (Figure 7-12). Lake Superior, Lake
     Michigan, and Lake Huron were under
     advisory for three pollutants each in 1999
     (Table 7-2). It should be noted that some of
     the advisories were of limited geographic
     extent, and advisories in most locations apply
     primarily to larger, older specimens high
     in the food chain.
                          Dioxins
                            12%
                                 Mercury
                                   17%
                                Mi rex
                         Chlordane
                           14%
          Figure 7-12. Great Lakes advisories were issued
          for five pollutants (U.S. EPA NLFWA, 2000c).
 Table 7-2. Fish Advisories Issued for Contaminants in Each
 of the Great Lakes
Great Lakes
PCBs  Dioxins  Mercury  Chlordane  Mirex
Lake Superior
Lake Michigan
Lake Huron
Lake Erie
Lake Ontario
• •
• •
• •

* *
     Species under fish consumption advisory in 1999 in at least
     one of the Great Lakes or connecting waters:
Largemouth bass
Rock bass
Smallmouth bass
White bass
Bloater
Bowfin
Brown bullhead
Burbot
Common carp
Quillback carpsucker
Catfish
Channel catfish
Chub
Black crappie
Round goby
American eel
Lake herring
White perch
Yellow perch
Northern pike
Redhorse
Silver redhorse
Chinook salmon
Coho salmon
Pink salmon
Gizzard shad
Smelt
Lake sturgeon
Freshwater drum
Bluegill sunfish
Brook trout
Brown trout
Lake trout
Rainbow trout
Siscowet trout
Splake trout
Steelhead trout
Walleye
Whitefish
Lake whitefish
White sucker
Longnose sucker
                                            Beach Closures
                                              EPA's Great Lakes National Program Office
                                            has conducted a beach closures monitoring
                                            program since 1983. Since 1998, the program
                                            has been merged into EPA's national tracking
                                            program. Health  authorities in all eight Great
                                            Lakes states submitted beach monitoring and
                                            closing information to EPA in 1999. Of the
                                            583 beaches on the U.S. side of the  Great
                                            Lakes, information was submitted on 327.
                                            About 20% of the 327 reported beaches
                                            (67 beaches) were closed at least once during
                                            the 1999 season (Figure 7-13). Of the
                                            reporting beaches that had closures, all but
                                            one had monitoring programs in place. Most
                                            beach closures were the result of elevated
                                            bacteria levels and sewage caused by runoff,
                                            stormwater, wildlife, sanitary and combined
                                            sewer overflows, or other  unknown causes. A
                                            few beaches were closed because of weather,
                                            wave action, or presence of aquatic weeds.

                                                                            Percentage of
                                                                           beaches closed
                                                                             per county:
                                                                           ^\ 0-15
                                                                           Zl 15-35
                                                                             j 35-100
                                                                           —I No Data
                                                                           ^B Available
                                                                           Q  Beach Closure
                                                                              in  1999
                                                           Figure 7-13. Great Lakes beach closings in 1999.
                                                                           National Coastal Condition Report

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Chapter 7
Great Lakes Coastal Condition
             Summary
                                    Ecological conditions in the Great Lakes, based on available
                                  information, are borderline poor (Figure 7-14). The primary
                                  problems in the Great Lakes in the 1990s were sediment
                                  contamination, benthic community condition, coastal wetland loss,
                                  and fish contaminants. Over 25% of sediments are enriched or
                                  exceed ERL/ERM guidance, benthic communities are in poorer
                                  than expected condition, and contaminant levels in fish tissue
                                  result in numerous advisories. While some improvements in these
                                  areas are being observed, there is still the potential for further
                                  degradation of benthic communities, increased fish contamination
                                  in selected areas, and decreases in dissolved oxygen.
                                    Figure 7-14 displays the condition of the major indicators of
                                  ecological condition in the Great Lakes. Sediment contamination,
                                  benthic community condition, coastal wetland loss, and fish tissue
                                  contaminant concentrations are considered in poor condition
                                  throughout sampled portions of the Great Lakes. Dissolved oxygen
                                  conditions and water clarity are considered good for the Great
                                  Lakes. Significant strides have been made in improving the
                                  condition of the Great Lakes. However, these efforts must be
                                  continued and potentially strengthened throughout the lakes to
                                  ensure continued environmental improvement.
                                  Overall
                                 Great Lakes
                                  ood   Fair
                                 Poor]
                                    Water Clarity
                                    Dissolved Oxygen
                                    Coastal Wetlands
                                    Eutrophic Condition
                                    Sediment
                                    Benthos
                                    Fish Tissue
Figure 7-14. Ecological conditions
in the Great Lakes are borderline
poor The primary problems in the
Great Lakes are sediment
contamination, benthic community
condition, coastal wetland loss, and
fish contaminants.
      National Coastal Condition Report

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                                                       Chapter 7    Great Lakes Coastal Condition
The  Great  Lakes National  Program Office

  The Great Lakes National Program Office (GLNPO), established by Congress in
1987 under Section 118 of the Clean Water Act, provides an institutional framework
for efforts to protect and restore the Great Lakes ecosystem in the United States.
Current GLNPO activities include
• Conducting open-lake sediment, biota, and water quality monitoring
• Funding habitat restoration and protection projects
• Coordinating Great Lakes protection efforts at all levels of government
• Working with both its  Canadian counterparts and the International Joint
  Commission to negotiate and implement the Great Lakes Water Quality
  Agreement.
  As part of the Great Lakes Water Quality Agreement, GLNPO and Environment
Canada convene a biennial conference called the State of the Lakes Ecosystem
Conference (SOLEC). Following the conferences, State of the Great Lakes reports
were issued in  1995,1997, and 1999. In 1998, a suite of 80 indicators was proposed to
be "necessary and sufficient" to adequately represent the major Great Lakes
ecosystem components, including the nearshore and offshore waters, coastal
wetlands, nearshore terrestrial, human health, societal, and land use. In 2000,
summary reports were prepared for 31 of the 80 indicators. These reports are
available on the Internet  on the SOLEC website (http://www.on.ec.gc.ca/solec) by
following the links to each SOLEC conference. Additional information on SOLEC
and the indicators project is available on the Internet at http://www.epa.gov/glnpo/solec.
  Working with state and provincial governments, GLNPO and Environment
Canada have identified 42 Areas of Concern (AOC) throughout the Great Lakes.
These are the most polluted areas that will require the most immediate action. For
each AOC, a Remedial Action Plan (RAP) is to be prepared by the cognizant
jurisdiction, usually a state  (on the U.S. side), with local involvement. For each
Great Lake, a Lakewide Management Plan (LaMP) is to be prepared to address
contaminant and habitat issues on a whole-lake scale. Five of the RAPs and four of
the LaMPs are binational, and the LaMP  for Lake Erie involves three EPA regions.
The LaMPs are to be prepared cooperatively among the governments and
jurisdictions with EPA as the U.S. lead.
                                                          National Coastal Condition Report


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-------
Chapter
        Coastal
        Condition
        for Alaska,
        Hawaii,
        and Island
        Territories


-------
Chapter 8
          Coastal Condition
         for Alaska, Hawaii)
          and Island Territories
                                                    The dazzling peaks off the
                                                    island of Kahoolawe are just
                                                    one of the many types of
                                                    coastlines throughout
                                                    Hawaii. Shorelines range
                                                    from white sandy beaches
                                                    on Oahu to the tallest
                                                    sea cliffs in the world on
                                                    Molokai. Each island offers
                                                    its own unique habitat for
                                                    marine life (Photo: Marc
                                                   SI Hodges).

          Monitoring of coastal resources m Alaska,
          Hawaii, and the island territories (e.g., Guam, Puerto Rico, U.S. Virgin
          Islands) is largely nonexistent. Although EPA Regions 2 (Puerto Rico
          and the U.S. Virgin Islands), 9 (Hawaii and Pacific Islands), and 10
          (Alaska) and the attendant state resource agencies conduct some water
          quality monitoring, no consistent programs covering all coastal
          resources exist. Efforts through EPA's Coastal 2000 Program are
          intended to fill this void for Alaska, Hawaii, and Puerto Rico. No plans
          exist for the development of coastal monitoring efforts in the Pacific
          Islands (beyond Hawaii). This chapter examines the available
          information for these areas.
 National Coastal Condition Report

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                                            Chapters    Coastal Condition for Alaska, Hawaii, and Island Territories
Alaska
  The surface area of the coastal resources of
Alaska dwarfs the coastal resources that exist
in the remaining 49 states. The total surface
area of estuarine resources for the continental
United States is 33, 211 square miles; for
Alaska, it is 97,838 square miles. Unfortunately,
most monitoring strategies have excluded
Alaska because of the logistical problems in
implementing a  monitoring program there.
However, no estimate of U.S. coastal condition
can be complete without information
concerning Alaska.
  The vast majority of Alaska's coastal
resources are presumed to be in relatively
pristine condition  due to Alaska's size, sparse
population, and  general remoteness. However,
the past 20 years have seen a general increase
in Alaskan populations in coastal areas, and
several environmental accidents have occurred
in coastal regions (e.g., the Exxon Valdez oil
spill). Water quality has been found to be
impaired in coastal areas surrounding port
facilities  along Prince William Sound, seafood
processing facilities in the Aleutian Islands,
and cruise ship docking facilities and corridors
near Juneau and along the southeastern
coastline. At present, the Alaska Department
of Environmental Conservation assesses
less than 1% of its total coastal
resources. Of the assessed
resources, 99% are impaired for
one or more uses. No consistent
information is available for the
remaining estuarine resources.
  In 2002, EPA's Office of
Research and Development,
Region 10, and Alaska's
 Causes of Impairment for Alaska's 1998 303(d)
 Listed Waters
  Debris
  Dissolved oxygen
  Fecal coliform
  Metals
  Petroleum products
  Phosphorus
Sediment
Turbidity
Residue
Seafood residue
Toxic and other
deleterious substances
 Alaska did not report any fish consumption advisories
 in 1999 or beach closings in 1998.

Department of Environmental Conservation
will initiate a comprehensive pilot monitoring
program to examine water quality, sediment
quality, and condition of biotic resources in
the coastal ecosystems of south-central Alaska.
The Alaska-National Coastal Assessment
Program will sample approximately 70
locations throughout the south-central region
(Figure 8-1). Information from this survey
should be available in 2003.
  For its 1998 305(b) report, Alaska assessed
237 (1%) of its 33,257 estuarine square miles.
Alaska reports on an Overall Use Support
classification only, and 235 square miles (99%
of assessed waters) are impaired for Overall
Use Support. It should be noted that Alaska's
assessment data are biased toward those waters
with known impairments. Efforts are under
way to assess other waters across the state.
Alaska has 43 coastal 1998 303(d) listed waters.

                                 Figure 8-1. Proposed Coastal 2000 sampling design for Alaska.
                                                                     National Coastal Condition Report

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       Cook Inlet Information Management
       & Monitoring System

        CIIMMS            ^^^^^^^J
        COOK INLET INFORMATION M AN AGEMENT'M ONITORIN G SYSTEM
              .
         Cook Inlet Information Management & Monitoring System (CIIMMS) is
       an Internet-based clearinghouse of data pertaining to the Cook Inlet watershed.
       Funded by the Exxon Valdez Oil Spill Trustee Council, the project seeks to provide
       stakeholders and decision makers with  access to a broad range of data pertaining
       to the ecological health and management of the Cook Inlet Watershed.
                                      The Cook Inlet Basin
  Environmental management on an ecosystem or watershed level
information on
a range of topics covering a
relatively large area. CIIMMS
seeks to foster greater
integration and coordination
of projects within the Cook
Inlet watershed by connecting
decision makers with data
relevant to management
and recovery of Cook Inlet
habitats and resources. The
CIIMMS database is available
on the Internet at
       http://info.dec.state.ak.us/ciimms.
                                                                requires
National Coastal Condition Report

-------
                                   Chapters    Coastal Condition for Alaska, Hawaii, and Island Territories
Cook  Inlet, Alaska
                                            Slimy sculpin (Cottos cognatusj
                                            Species assayed for presence of organic
                                            contaminants and trace elements.
  U.S. Geological Survey assessed the condition of waters composing the Cook Inlet
watershed as part of the National Water Quality Assessment (NAWQA) Program.
Work began on Cook Inlet in 1997 and is scheduled to continue until 2002. The
Cook Inlet watershed is more than 38,610 square miles and has a human population
of approximately 347,000, with 254,000 being concentrated in the Municipality
of Anchorage. The watershed includes Anchorage, the Matanuska-Susitna Valley,
part of Denali National Park, and sections of
the Kenai Peninsula. The well-known salmon
runs in this area make it a popular location
for  recreational fishing. The Kenai River,
for  example, experienced an  estimated
321,000 angler-days in  1997. Water quality
was generally good but did suffer in several
highly populated locations.
  Tests for organic compounds showed very low contamination throughout the
watershed with several  notable exceptions within Anchorage. Of 32 organochlorine
pesticides assayed, only 3 were detected: dieldrin, DDE (a metabolic product of
DDT), and hexachlorobenzene. Only hexachlorobenzene exceeded minimum
reporting limits. However, Chester  Creek in Anchorage, Alaska, showed
concentrations of PAHs, phenols, and phthalates that were nearly 50 times greater
than the national median. In all, 24 organic contaminants, including PCBs, were
detected in the tissue of
sculpins from Chester Creek.
The results place Chester Creek
in the highest 25% of stations
tested nationally for organic
compounds. Throughout the
Cook Inlet basin, the number of
organic contaminants detected
at each location  correlated
strongly with human
population density (r2=0.86).
                                 <£ 0)
                                 It
                                 K «
                                 Oco
                                 W ^r
                                 O °
                                 05?
                                 >o
35

30

25

20
                                 ;«  15
                                 E-H
                                  •s  10
r2 = 0.86
                                         Cook Inlet
                                          Basin


                                           50   100    150   200   250    300
                                            Population Density, in People per Square Mile
                                                                           350
                                Comparison of population density and semivolatile organic
                                compounds (SVOC) detections among selected NAWQA
                                study units.
                                                            National Coastal Condition Report

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Chapter 8
Coastal Condition for Alaska, Hawaii, and Island Territories
       Hawaii
         Hawaii does not have a comprehensive
       coastal monitoring program. Some monitoring
       is done on the islands of Oahu and Hawaii
       and some monitoring is planned for Hawaiian
       coral reefs, but no comprehensive programs
       are currently operating. Most monitoring
       efforts in Hawaii have been targeted to specific
       problem areas—nonpoint source runoff,
       offshore discharges, or specific bays. For
       example, Kaneohe Bay is rather heavily studied
       in comparison to other Hawaiian  coastal
       resources; however, there is still not enough
       data to determine the spatial extent of its
       problems. Another example is Mamala Bay,
       where an intensive examination of the public
       wastewater outfalls from Oahu into the bay
       showed that the areas adjacent to the
       discharges were not statistically different from
       reference areas. However, no comprehensive
       spatial examination of Mamala Bay was
       conducted so that these findings could be
       placed in a regional or statewide context. The
       Coastal 2000 efforts in Hawaii in 2001 will
       examine the coastal resources throughout the
       island chain (main islands only) and examine
       the condition of Mamala Bay, its inland
       estuarine resources, and the nearshore effects
       of these inland features on Mamala Bay's
       ecological condition.
         In 2001, the Coastal 2000 effort will be
       undertaken by EPA's Office of Research and
       Development, Region 9, the University of
       Hawaii, and state and local resource agencies
       in Hawaii. This effort will be the first
       comprehensive survey of the ecological
       conditions of the coastal resources of Hawaii.
                                             The survey will examine water quality,
                                             sediment quality, and biotic condition at
                                             50 locations throughout the primary island
                                             chain (Figure 8-2). Information from this
                                             survey should be available in 2003.
                                                      Kauai
                                              Niihau
                                                           Oahu
                                                                Molokai
                                            O  Sampling Location
                                                                     Hawaii
                                          Figure 8-2. Proposed Coastal 2000 sampling design for Hawaii.


                                                The state of Hawaii assessed 54.8 square
                                             miles of estuaries (100%) and 884 (84%) of its
                                             1,052 miles of shoreline for its 1998 305(b)
                                             report. Of the assessed estuaries, 43% fully
                                             support their designated uses, 1% are
                                             threatened for one or more uses, and 56% are
                                             impaired by some form of pollution or habitat
                                             degradation (Figure 8-3).
                                                  Fully Supporting
                                                      43%
                                                                            Impaired
                                                                              56%
                                                         Threatened
                                                             1%
                                                                   Fair
                                                                         Poor
                                                           Figure 8-3. Water quality in assessed estuaries
                                                           in Hawaii (U.S. EPA).
      National Coastal Condition Report

-------
                                             Chapters    Coastal Condition for Alaska, Hawaii, and Island Territories
  Of assessed shoreline, 89% fully supports
its designated uses, 1% is threatened for one
or more uses, and 10% is impaired by some
form of pollution or habitat degradation
(Figure 8-4). Hawaii did not report on
individual use support.
                     Impaired
                        10%
                            Threatened
                                1%
      Fully Supporting
           89%
  Figure 8-4. Water quality for assessed shoreline
  in Hawaii (U.S. EPA).

  Hawaii has 18 waters that are listed as
impaired under Section 303(d) of the Clean
Water Act. The percentage of listed waters
impaired by each of the major pollutant
categories is shown in Figure 8-5.

       1998 303(d) Impairments for the
              Hawaiian Islands
                  Pesticides
                   Mercury

              Toxics/Organics
               Toxics/Metals/
                  Inorganics
                  Pathogens
                  Nutrients |

               Sedimentation
0%
0%
0%
] 10%
\4%
•





|98%

t?
                         0    SO    100
                         Percent of Listed
                          Miles Impaired
 Figure 8-5.  1998 303(d) listed waters in Hawaii and the
 percentage of miles impaired by the major pollutant
 categories (note that a listing may be impaired by multiple
 pollutants) (U.S. EPA).
      Hawaii and American Samoa each had one
   active fish consumption advisory for estuarine
   waters in 2000. Pearl Harbor in Hawaii was
   listed for PCBs, and Inner Pago Pago Harbor
   in American Samoa was listed for chromium,
   copper, DDT, lead, mercury, PCBs, and zinc in
   2000. Both of these advisories warned of
   contaminant levels in all species of fish and
   shellfish within the designated waterbodies.
Hawaii is the only state that continues to grow geographically each
year Here, a spectacular display of molten lava pouring into the
ocean off the southern coast of the Big Island (Photo: Susan Scott).
   Puerto Rico
      No consistent monitoring program for
   coastal resources exists for Puerto Rico. A
   National Estuary Program, the San Juan Bay
   Estuary Program (SJBEP), was established in
   1992. Some monitoring with regard to water
   quality and tissue residue burdens has  been
   completed by Region 2, SJBEP, and the
   Caribbean Environmental Protection Division,
   although these surveys focus almost exclusively
   on the San Juan area. The primary environmental
   concerns for coastal regions in Puerto Rico
   include pathogens, toxic contaminants, nutrient
   addition, and habitat loss.
                                                                       National Coastal Condition Report


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Chapter 8
Coastal Condition for Alaska, Hawaii, and Island Territories
          In 2000, EPA's Office of Research
       and Development, Office of Water, and
       Region 2 initiated a comprehensive survey of
       Puerto Rico's estuarine ecosystems to examine
       water quality, sediment quality, and biotic
       condition. The survey consists of 50 locations
       throughout the estuaries of Puerto Rico
       (Figure 8-6). Information  from this survey
       will be available in 2002.
                                  O Sampling Location
       Figure 8-6. Coastal 2000 sampling design for Puerto Rico.

          Puerto Rico assessed 175.4 square miles
       of estuaries and 550 miles of shoreline
       (100%) for its 1998 305(b) reports. Of
       estuarine square miles, 15% fully support
       their designated uses, 84% are threatened for
       one or more uses, and 1% are impaired by
       some form of pollution or habitat degradation
       (Figure 8-7). Of ocean shoreline, 60% fully
       support its designated uses, 33% is threatened
       for one or more uses, and 7%  is impaired by
       some form of pollution or habitat degradation
       (Figure 8-8). Individual use support for
       assessed shoreline in  Puerto Rico is shown
       in Figure 8-9.
                                                            Fully     Impaired
                                                         Supporting     1%
                                                                             Threatened
                                                                                84%
                                                            Fair
                                                                  Poor
                                                               Figure 8-7. Water quality in assessed estuaries in
                                                               Puerto Rico (U.S. EPA).
                                                                                Impaired
                                                                                  7%
                                                        Fully
                                                     Supporting
                                                        60%
                                                                                         Threatened
                                                                                            33%
                                                            Fair    Poor
                                                   Figure 8-8. Water quality for assessed shoreline in
                                                   Puerto Rico (U.S. EPA).
600-
500-
in
.« 400-
f
0>
rt 30°"
W 200-
100-
o-





D Fully Supporting
D Threatened
D Impaired



A
—


	
vqu
Su



i_
itic Life Prirr
sport









iar)
5wi




_
-O
mrr




• ,
antact -
ing



Sec
C(



1
ondary
antact
Designated Use
                                                       Figure 8-9.  Individual use support for assessed shoreline in Puerto Rico
                                                       (U.S. EPA).
      National Coastal Condition Report

-------
                                             Chapters    Coastal Condition for Alaska, Hawaii, and Island Territories
Other Island Systems
  No consistent coastal monitoring programs
exist for Guam, the U.S. Virgin Islands, the
Northern Mariana Islands, or American
Samoa. At present, no plans exist for the
development of coastal monitoring systems
for these territories.
  The U.S. Virgin Islands assessed 727 (79%)
of its 921  estuarine square miles and 173 miles
(100%) of coastal shoreline for its 1998 305(b)
reports. Of its estuarine waters, 73% fully
support their designated uses, 27% are
threatened for one or more uses, and 0.1% are
impaired by some form of pollution or habitat
degradation (Figure 8-10). Of its shoreline
miles, 73% fully support their designated uses,
21% are threatened for one or more uses, and
6% are impaired by some form of pollution or
habitat degradation (Figure 8-11). Individual
use support for assessed U.S. Virgin Island
shoreline is shown in Figure 8-12.
                                        Fully
                                      Supporting
                                        73%
                                  Good    Fair    Poor
                                                          Threatened
                                                             27%
                                       Impaired
                                     0% (0.9 mile)
                                 Figure 8-10. Water quality in assessed estuaries in the
                                 U.S.Virgin Islands (U.S. EPA).
                                                   Impaired
                                                     6%
                                        Fully
                                      Supporting
                                        73%
                                                           Threatened
                                                              21%
                                   Good
                                          Fair
                                                Poor
                                 Figure 8-11. Water quality for assessed shoreline miles
                                 in the U.S.Virgin Islands (U.S. EPA).
                      600

                      500

                   in
                   .2  400
                   f
                   22
                   rt
300-
                      200-
                      100-
                           Aquatic Life
                             Support
                       Fish
                   Consumption
                                       Fully Supporting
                                       Threatened
                                       Impaired
            Primary
           Contact -
           Swimming
Designated Use

Secondary
 Contact
              Figure 8-12. Individual use support for assessed estuaries in the Virgin Islands (U.S. EPA).
                                                                      National Coastal Condition Report

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Chapter 8
Coastal Condition for Alaska, Hawaii, and Island Territories
                                                                     Summary
         The U.S. Virgin Islands has nine waters
       listed as impaired under Section 303(d)
       of the Clean Water Act.
         Guam assessed 14 miles (12%) of its
       117 miles of ocean shoreline waters for its
       1998 305(b) report. All 14 miles of assessed
       waters are impaired for swimming.
         Guam and the U.S. Virgin Islands reported
       on beach closings for EPA's BEACH Watch
       Program. In Guam, information was reported
       for 35 beaches, and all but one had a monitor-
       ing program in place in 1999 to test water
       quality. There were no beach closings in
       Guam in 1999. Information on 27 beaches
       on St. Croix in the U.S. Virgin Islands was
       reported to EPA, and each of the 27 beaches
       was closed at least once in 1999.
        Causes of Impairment for the Virgin Islands 1998
        303(d) Listed Waters
         Organic Enrichment/Low Dissolved Oxygen
         Benthic Impacts
         Turbidity
         Pathogens
         Phosphorus
       Ulua, also known as Skipjack (Caranx ignoblis),
       are large predatory fish found in deeper
       waters around Hawaii.The Ulua is considered
       a delicacy to local residents (Photo: U.S. Fish
       and Wildlife Service).
                                                            Ecological conditions of the
                                                         coastal resources in Alaska, Hawaii,
                                                         Puerto Rico, and the U.S. Virgin
                                                         Islands are largely unknown.
                                                         Alaska assesses less than 1% of
                                                         its coastal estuaries  and shoreline.
                                                         Hawaii's 305(b)  data suggest that
                                                         56% of Hawaii's estuarine area
                                                         is impaired by some form of
                                                         pollution or habitat degradation,
                                                         while only 10% of its coastal
                                                         shoreline is impaired. Hawaii's
                                                         sampling effort in estuaries is
                                                         focused on known areas of
                                                         concern, so it is difficult to
                                                         interpret these results. Surveys
                                                         planned for 2001 will provide
                                                         a less biased view of estuarine
                                                         condition. Hawaii's 1998 303(d)
                                                         data suggest that the primary
                                                         causes of estuarine impairment are
                                                         increased concentrations of total
                                                         suspended solids and nutrients.
                                                         Coastal resources in Puerto Rico
                                                         are believed to be in good
                                                         condition but are threatened to
                                                         become impaired, based on Puerto
                                                         Rico's 305(b) data. The 305(b)
                                                         information for the U.S. Virgin
                                                         Islands suggests that its estuarine
                                                         and coastal resources are in good
                                                         condition.

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          ghlight
Kaneohe  Bay, Hawaii -
A Coastal  Intensive  Research  Site

  Kaneohe Bay, characterized as "one of the most intensively studied coral reef
systems in the world," is located on the windward coast of Oahu, Hawaii. The Bay is
also one of the most oligotrophic embayments in the United States, and land use in
the watershed ranges from urban to agricultural, presenting a variety of effects on
the water quality of the Bay. Kaneohe Bay is protected from the ocean by a barrier
coral reef, which, together with the patch  reefs inside the Bay, provide habitat and
shelter to coral reef fishes, invertebrates, algae, and seagrasses.
  A long-term project to
monitor water quality and
sediment processes in
Kaneohe Bay was initiated
in 1998. This project is part
of the nationwide Coastal
Intensive Site Network
(CISNet) program, a
cooperative effort funded
by EPA, NOAA, and the
National Aeronautics and
Space Administration
(NASA). CISNet was
designed to research the ecological responses to anthropogenic stresses  in coastal
environments, to examine the relationships between changes in environmental
stressors, and to provide intensively monitored sites for development and evaluation
of change in coastal systems.
  The specific focus of the Kaneohe Bay CISNet project is to examine the linkages
between watershed land use patterns and events and the responses of the  Kaneohe
estuarine/coral reef ecosystem. Another important goal of the project is to serve as a
central clearinghouse for environmental data related to Kaneohe Bay and to begin
other projects that might make use of these data sets.
  Recently collected data on water column and sediment parameters, such as
chlorophyll and nutrient profiles, are available on the Internet:
www.hawaii.edu/cisnet.
Kaneohe Bay, Oahu, Hawaii (Photo: Frank Stanton)

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                  ghlight
        Marine Alien Species Workshop  in Hawaii

          Recent investigations of the introduction of nonnative marine species indicate
        that up to 20% of all marine organisms found within the harbors of the main
        Hawaiian Islands are alien species. To raise the level of understanding about
        the impact of these marine alien species in Hawaii and provide a forum for
        the discussion of control and management methods, the U.S. Fish and Wildlife
        Service led a workshop on May 18, 2001, in Honolulu. The workshop brought
        together federal and state agency representatives, local conservation groups, and
        academics. A follow-up meeting was held on October 5,2001.
          The workshop and accompanying literature included information on the
        following: lists of established marine alien species of fish, invertebrates, and algae
        in Hawaii's waters; habitat types most frequently invaded; avenues of introduction;
        likely future marine alien invaders; impacts that established alien species have on
        native ecosystems; potential control methods for established marine aliens; and
        interdiction methods to minimize further introductions. More detailed information
        and wet-lab samples will be provided for  selected species.
          Results of the workshop will be made available in booklet and CD-ROM formats.
        The booklet and CD-ROM are intended to be evolving documents that will be
        revised periodically to reflect updated information about current alien species as well
        as information about as-yet unintroduced species. Also, the following guidebook was
        completed using grants from the Packard Foundation, U.S. Fish and Wildlife  Service,
        and the National Marine Fisheries Service to the B.P. Bishop Museum and the
        University of Hawaii: "A Guide of Introduced Marine Species in Hawaii," edited by
        L.G. Eldredge and C.M. Smith. Bishop Museum Technical Report 21, August 2001.
          For more information, contact Kevin Foster, Marine Alien Species Coordinator,
        U.S. Fish and Wildlife Service Pacific Islands Region, (808) 541-3441.
National Coastal Condition Report

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Chapter
        The
        Future -
        A National
        Strategy

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       Chapter 9
                   The Future  —
                  A National Strategy
r
            CIV&CIS (\T€- among the most popular places to live
and locate industry in the United States. The coastal zone, defined as all
areas within 50 miles of the shoreline, constitutes 17% of the U.S. land
area and is inhabited by more than 53% of the nation's population.
Coastal populations continue to grow, a trend that could result in
75% of the U.S. population living in the coastal zone by 2020. The high
density of people and industry in coastal areas is a potential threat to
the ecological condition of our nation's coastal environments.
  Currently, no single comprehensive monitoring program provides the
data necessary to produce an integrated assessment of the ecological
condition of the nation's coastal areas. Even when data are compiled
from existing federal and state coastal monitoring programs, there are
still large data gaps and data collection inconsistencies that make it

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                                                               Chapter 9    The Future -A National Strategy
difficult to generalize about the condition of
the nation's coasts as a whole. Competing
objectives, levels of funding, and varying
scopes of interest have resulted in a
proliferation of data in some areas (like
Chesapeake Bay), while data are sparse or
nonexistent in other areas (like Alaska).
  There are several national programs that
can contribute information about the nation's
coasts, but they cannot be used to formulate a
complete picture of the nation due to
limitations in the scope of parameters assessed
or area monitored. EMAP's regional surveys
provide consistent data for the mid-Atlantic,
Southeast, and Gulf of Mexico coasts;
however, budget constraints precluded the
implementation of these regional surveys in
other regions of the United States (e.g., the
West Coast, Alaska). Data from the Coastal
2000 program will address many of these
issues. NOAA's National Status and Trends
(NS&T) Program provides information for
representative locations across the United
States on a specific set of environmental
parameters focused on toxic contaminants.
This program is designed only to monitor
contaminant levels and trends in sentinel
organisms and sediments. The NS&T Program
is not designed to support probability-based
estimates of the spatial extent of degraded
versus nondegraded resources across regional
to national scales.
  EPA's Clean Water Act Section 305(b) water
quality data for coastal resources are reported
by coastal states, which use a variety of
approaches for data collection. Data reported
range from environmental parameters
collected at specific locations with known
problems to larger-scale characterization of
state watersheds based on evaluations of
existing data and professional judgment. Many
states do not have the resources  to conduct
comprehensive coastal monitoring to collect
data for their 305(b) assessments. States like
Alaska, Washington (excluding Puget Sound),
Oregon, California (north of San Francisco
Bay), North Carolina, Georgia, and Maine
have little or no coastal monitoring in place
and receive little or no financial support to
create comprehensive coastal monitoring
programs. The lack of monitoring data for
Alaska is particularly bothersome because
Alaskan estuaries represent nearly 75% of all
U.S. estuarine resources, yet very little

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Chapter 9    The Future -A National Strategy

              The CWAP Coastal Research and Monitoring Strategy
              outlines a plan to develop a comprehensive integrated
              framework for assessing the condition of the nation's coasts.
                                                                  CLEAN WATER ACTION PLAN:
                                                                   COASTAL RESEARCH
                                                                  AMD MONITORING STRATEGY
       information to support the kind of analysis
       used in this report is available (i.e., spatial
       estimates of condition based on indicators
       measured consistently across broad regions).
         Due to the current state of information, we
       are unable to characterize quantitatively the
       condition of all of the nation's coastal waters.
       Moreover, at present, the assessments must be
       based on a limited number of ecological
       indicators for which there are consistent data
       sets available to support estimates  of condition
       over as broad an area as possible.
         In this report, we have compiled existing
       information to provide a preliminary picture
       of the condition of estuarine waters in the
       United States. Although it may appear that this
       report accomplishes that goal, it falls short of
       the "comprehensive report on the condition of
       the nation's coastal waters" called for by the
       Clean Water Action Plan due to a lack of
       nationally consistent data. What has been
       accomplished is the best assessment of coastal
condition that can be made with existing data.
Figure 9-1 represents our best perspective of
ecological condition in estuaries. It is based on
substantial information on the Mid-Atlantic,
Southeast, and Gulf of Mexico Coasts but
scattered and sparse information from New
England, the West Coast, Alaska, the Pacific
Islands, and the Caribbean. One of our
greatest needs for the 21st century is a
coordinated, comprehensive, and integrated
coastal monitoring program that examines all
aspects of coastal condition at national,
regional, state, and estuary-specific scales. The
program should include estuaries, beaches,
coastal wetlands, the Great Lakes, and coastal
waters throughout the 24 coastal states and the
Pacific and Caribbean commonwealths. The
Clean Water Action Plan: Coastal Research and
Monitoring Strategy (www.cleanwater.gov),
established under authority of the Clean Water
Action Plan (U.S. EPA, 1998), presents the
conceptual framework for coastal monitoring
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                                                                    Chapter 9    The Future -A National Strategy
and research to be conducted in partnership
among federal agencies, state resource
agencies, and academia. The framework will
guide the direction of coastal monitoring and
research across federal agencies to address
current and future environmental issues  of the
coast. The recommended coordination and
  Overall National
 Coastal Condition
collaboration of federal agencies will permit
future coastal research and monitoring
activities to benefit from the specific
knowledge and experience of each agency—
the resulting decision-making capability will
be greater than the sum of the parts.
   Overall
 Great Lakes
                                                                                      Overall
                                                                                     Northeast
                                                                                    Good   Fair   Poor
   Good   Fair     Poor
      Ecological Health
       Water Clarity
       Dissolved Oxygen*
                          Overall  FT
                          Southeast^ 7
       Coastal Wetlands
       Eutrophic Condition
       Sediment
       Benthos
       Fish Tissue

 * No indicator data available.
 ** Does not include the hypoxic zone in offshore Gulf of Mexico waters.
 Figure 9-1. Overall national coastal condition.
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Chapter 9    The Future -A National Strategy
       Objectives of Research
       and Monitoring within
       an Integrated Assessment
       Framework
         The complex and changing nature of the
       coastal waters, bays, estuaries, and wetlands
       often requires the integration of physical,
       chemical, biological, and ecological data to
       assess coastal environmental conditions and
       often requires the integration of research with
       monitoring to improve or extend our
       assessment capabilities. For the past decade,
       academic, federal, state, and private sector
       scientists have been working on new
       approaches to this integration  (Messer
       et al., 1991; NSTC, 1997). These integrated
       assessment efforts appear to have roughly the
       same common goal:
          Provide the national, regional,
          and local capabilities to measure,
          understand, analyze, and forecast
          ecological  change (natural and
          anthropogenic) that can affect coastal
          economies, public safety, and the
          integrity and sustainability of the
          nation's coastal ecosystems.
                                                        Due to the unique marine environment
                                                        surrounding the Channel Islands, the Channel
                                                        Islands National Marine Sanctuary (CINMS) is
                                                        home to a diverse array of marine life, making
                                                        the region highly valuable to scientific
                                                        research.The CINMS routinely conducts
                                                        research to monitor; preserve, and protect the
                                                        Sanctuary's rich resources. In 1998, the
                                                        CINMS participated in a regional monitoring
                                                        survey of the Southern California Bight
                                                        coordinated by the Southern California
                                                        Coastal Water Research Project (SCCWRP).
                                                        Trawl and sediment samples from  randomly
                                                        selected sights around the islands were
                                                        collected to measure the distribution and
                                                        health of the island's marine life (Photo:
                                                        Channel Islands NMS).
  Integrated assessments provide an effective
format for bridging science and policy and,
therefore, are the appropriate context for
designing a research and monitoring strategy.
Integrated assessments have the following
objectives:

• Document status and assess trends in
  environmental conditions at the necessary
  scales for scientific investigation and policy
  development.

• Evaluate the causes and consequences of
  changes in environmental status and trends.

• Assess environmental, economic, and
  sociological impacts of alternative policies
  for dealing with these changes.

  Research is necessary to improve both the
assessment techniques and the monitoring
done to support these assessments. The
research necessary to support these activities
includes

• Predict change and create an early warning
  detection system.

• Analyze environmental, economic, and
  sociological impacts of coastal policy. A
  large number of national, state, and tribal
  policies direct the expenditure of billions of
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                                                               Chapter 9    The Future -A National Strategy
  dollars of public and private money to
  protect the coastal zone. It is important to
  understand if these investments are well
  spent—if the coastal zone has been
  protected or restored.

• Understand coastal physical and ecological
  processes. An understanding of the
  physical and ecological processes of the
  coastal zone underlies all of the other
  objectives. Investments in research to
  improve this  understanding are paid back
  directly or indirectly by our increasing
  ability to truly understand current status,
  predict future trends, and determine the
  significance of change.

• Improve or enhance monitoring and
  assessment tools. Our ability to perform the
  above objectives rests on our ability to use
  federal investments wisely. Advancements in
  field monitoring and observation, remote
  sensing, and data management and display
  technology have created opportunities to
  acquire, manage, and disseminate coastal
  environmental data more efficiently and
  economically than was thought possible
  10 years ago.  The challenge is to select
  wisely from or improve upon the
  traditional, new, or emerging technologies
  that will provide information needed for
  policy or management decisions.
  The effective  integration  of monitoring and
research will enable comprehensive assessments
of the nation's coastal resources and eventual
remediation of the problem. This approach is
essential to differentiate between actual and
perceived environmental issues in the coastal
zone so that (1) we address all major coastal
environmental issues appropriately and in a
timely manner and (2) we avoid unnecessary
environmental regulation or environmental
damage. It follows that an  integrated
monitoring and research strategy focused on
supporting the comprehensive management of
our coastal resources requires an integration
of key assessment and management elements
with monitoring and research objectives
(Figure  9-2). Monitoring is crucial to
documenting status and assessing trends,
determining associations between stressors
and impacts, and assessing the effectiveness of
management actions. Research is an important
part of environmental monitoring and is
particularly important for improving our
ability to interpret monitoring data and
improve our assessment capability. Additionally,
research is key to predicting impacts as a result
of emerging trends and to forecast and assess
the impacts and benefits of management
actions.
                    Monitoring
       Remediation
Assessment
                   Policy/Program
                   Development
  Figure 9-2. Monitoring-research-assessment-remediation
  cycle that gauges coastal ecological condition and the
  effectiveness of remediation policies and programs.

  These objectives capture the intent of the
Coastal Research and Monitoring Strategy—
to observe coastal status and to differentiate
between real and perceived coastal water issues
and to provide informed and expert judgment

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Chapter 9    The Future -A National Strategy
       necessary for coastal policy and management.
       The objectives are, to a large extent, derived
       from national environmental monitoring and
       research objectives presented in Integrating the
       Nation's Environmental Monitoring and
       Research Networks and Programs, the national
       framework established by the National Science
       and Technology Council (NSTC, 1997). The
       NSTC objectives, as modified to address
       specific issues of coastal waters, overlap with
       charters of the departments and agencies
       represented in the Coastal Research and
       Monitoring Strategy Workgroup.
         To be effective,  an integrated assessment
       strategy for monitoring and research activities
       must be designed to accomplish all of these
       objectives. Only by addressing all components
       can the effectiveness of management actions
       be tracked.
Monitoring
       The Gulf of the Farallones has over 100 dedicated volunteers
       for the BEACH Watch program. BEACH Watch volunteers
       survey their designated sanctuary beaches once a month and
       receive 80 hours of classroom and field training (Photo: Gulf
       of the Farallones NMS).
  The Coastal Research and Monitoring
Strategy addresses the physical, chemical,
biological, and ecological conditions of coastal
waters, bays, estuaries, beaches, wetlands, and
the Great Lakes. A national coastal monitoring
strategy must simultaneously meet the needs
of the nation, the coastal states, and tribal
nations. This strategy is the most effective way
to satisfy needs at these scales, but it is also
essential to receive the necessary cooperation
from the coastal states and tribes. Only
through this cooperation can the longevity of
any national coastal monitoring  effort be
assured. The mechanisms to achieve this
interaction are beyond the scope of this
strategy. However, key attributes  of the
proposed approach should include cofunding
by federal and state programs, nested designs
to allow state-specific issues to be addressed  in
a national context, a uniform reporting
protocol to facilitate data and information
exchange, and further attention to specific
state issues, collective reporting, and
cross-system  comparisons.
  The coastal ecosystems addressed by this
strategy include estuaries, coastal waters,
beaches, wetlands, and the Great Lakes.
Because the scale and dimensions of these
systems vary  considerably, the "optimal"
monitoring design is one that allows
adaptation to each ecosystem while
maintaining a similar core design that would
allow intercomp arisen and tiered estimates of
condition. Attempts to design one program
that fits all cases generally fail because all
temporal and spatial scales are pertinent and
important. Therefore, the design proposed

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                                                                 Chapter 9    The Future -A National Strategy
here incorporates a flexible, nested strategy
that uses a base design (common to all), with
details designed by the appropriate
stakeholders at each level.
  The strategy for a national coastal
monitoring design is based on the three-tiered
approach developed by EPA (Messer et al.,
1991) and recommended by NSTC (1997).
The three-tiered monitoring strategy addresses
several of the major attributes of an integrated
assessment:
• Characterization of the problem
• Diagnosis of causes
• Remediation actions
• Assessment of effectiveness of actions
• Reevaluation of causes
• Continued assurance of effectiveness of
  actions.
  These attributes, in combination with the
formulation of management actions, create the
cycle of monitoring and attendant research
necessary to identify, solve, correct, and
manage environmental problems. The
proposed three-tiered national coastal
monitoring design features:
• Characterization of the Problem (Tier I)—
  Broad-scale ecological response properties
  as a base determined by survey, automated
  collection, and/or remote sensing.
• Diagnosis of Causes (Tier II)—Issue- or
  resource-specific surveys and observations
  concentrating on cause-effect interactions.
• Diagnosis of Interactions and Forecasting
  (Tier III)—Intensive monitoring and
  research index sites with higher spatial  and
  temporal resolution to determine specific
  mechanisms of interaction needed to build
  cause and effect models.
  Data and information generated at each
tier help in the interpretation of results
from the other tiers. For example, Tier I
(characterization) data provide geographic
context for data collected at Tiers II and III
(e.g., how widespread is the problem and how
much of the nation's resources are affected by
its occurrence?). Tier II  (diagnosis of causes)
and Tier III (diagnosis of interactions) aid in
understanding the seriousness of a particular
relationship or issue. Tier III also aids in
interpreting results at Tiers I and II and links
process research with long-term ecological and
environmental measurements to strengthen
cause and effect linkages and predictive
models that relate stresses and environmental
responses.
 As more locations are studied for invasive species
 and as the protocols for monitoring become more
 standardized, more systematic knowledge will be
 gained of anecdotally known regional variations in
 invasion rates and species. Intensive study at specific
 locations where invasions have taken place, as well
 as at ecologically and climatically similar locations
 with invasion observed to a different extent or by
 different species, will help establish what factors put
 a particular area at risk from what species or types
 of species.
Characterization of the Problem
(Tier  I)
  Measurements in Tier I are designed to
characterize problems by tracking the natural
dynamics of coastal ecosystems in order to
identify large-scale existing and emerging
issues. Therefore, these measurements focus
on the first step of integrated assessments—

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Chapter 9    The Future -A National Strategy
       documenting status and trends in order
       to characterize the problem(s). Tier I
       measurements would generally be taken at
       fairly coarse spatial and temporal scales based
       on probabilistic approaches except for those
       that can be generated by remote platforms
       (e.g., satellites) where coverages may be
       complete. This approach is state-oriented
       and, through consistency of design and
       measurements, produces a national coverage.
       In accordance with the most recent work in
       this area (CENR, 2000), indicators to be
       measured in Tier I include (1) measures of
       community and ecosystem structure and
       function (productivity, abundances and
       distributions of plants and animals, diversity,
       and important attributes of nutrient and
       chemical cycling) and (2)  environmental
       stressors (primary stressors of coastal
       ecosystems) and habitat variables (measures
       required to interpret natural variability in
       rapidly changing coastal environments).
         Many measurements in Tier I can be
       derived through automated sensors (e.g.,
       satellites, aircraft reconnaissance, and buoys).
       However, several measurements must still be
       conducted through field sampling and
       laboratory analysis. These measures, collected
       using an integrated probabilistic  design
       including all coastal states, would provide a
       comprehensive, integrated assessment of the
       "health" of each state and, through integration,
       the nation's coastal resources. The number of
       sites likely to be included at this level would be
       50 for each coastal state for each  coastal
       environment (e.g., wetlands, estuaries, beaches,
       Great Lakes, offshore).
Diagnosis of Large-Scale Causes
(Tier II)
  To assess the causes of problems identified
in Tier I, Tier II monitoring would be
conducted only in areas identified as impacted
by Tier 1 monitoring or through other
available databases (e.g., the TMDL Tracking
System). This "national" sampling tier would
be stratified by environmental issue, with a
monitoring program associated with each
stratum. Examples of strata are
• Eutrophic condition
• Contamination by metals and organics
• Contamination by microbial organisms
• Invasive species
• Habitat degradation
• Fisheries declines
• Harmful algal blooms
• Hypoxia.
  The primary purpose for the collection of
monitoring data at the Tier II level would be
to quantify the relationships among ecosystem
response variables (e.g., productivity, benthic
abundance, bird abundance) and environ-
mental stressors (e.g., nutrients, low dissolved
oxygen, habitat loss) in order to diagnose the
cause(s) of the observed environmental
problem. It is through this quantification that
better stewardship and better correctional
operations can be determined. The number of
sampling sites for each issue stratum would be
determined largely by the number of locations
and regions displaying the particular issue,
although an expectation of about 100 to 250
sites per issue stratum seems to be reasonable.
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                                                                Chapter 9    The Future -A National Strategy
Tier II alone is not sufficient for understanding
relationships well enough to develop
predictive capabilities. The integration of
Tiers II and III should provide that predictive
power.

Diagnosis of Interactions  and
Forecasting (Tier III)
  Monitoring at Tiers I and II provides
information that can be used to develop
policies and actions to correct the
environmental problems found throughout
the nation. However, many problems are the
result of complex interactions of stressors,
habitats, natural environments, and
anthropogenic activities. To determine these
interactions and forecast the likely
environmental response of these interactions,
this strategy proposes the development of
Tier III sites. At these sites, measurements are
spatially and temporally intensive and are
completed at few locations over relatively
short time periods (weeks to years). Much of
the research necessary to develop indicators or
indices with forecasting power will be
accomplished at these sites in conjunction
with the intensive monitoring. Approximately
25 to 50 of these sites would be identified.
  The data and information generated at each
tier helps in interpretation at the remaining
tiers. Tier I information places Tiers II and III
information into perspective—how broad a
problem is the issue and how much of the
nation's resources are affected by its occur-
rence, correction, and understanding? Tiers II
and III provide an understanding of the
seriousness of a particular relationship or
issue. At Tier I, all problems are, in essence,
                r
Scientists retrieve aTucker net, which has three nets to sample
different depths and obtain discrete samples of tiny organisms
that make up the base of the food web in the Cordell Bank
Sanctuary (Photo: Jamie Hall).
treated equally, but work at Tiers II and III
may show that losses of some species
distributions are more important than others.
Tier III aids in interpreting results at Tiers I
and II and links process research with long-
term measurements of ecological and
environmental measures to strengthen cause
and effect linkages and predictive models
relating stresses and ecosystem response.
  These three monitoring tiers correspond to
the characterization of the problem and
diagnosis of causes and  interactions of existing
environmental problems within the integrated
assessment model. Regardless of the
requirements for specific spatial and/or
temporal scales, these monitoring tiers provide
information for the assessment of the
effectiveness of actions and continued
assurance of that effectiveness.

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Chapter 9    The Future -A National Strategy
       Research
         The interaction of research in the
       development, execution, and revision of
       monitoring coastal ecosystems is a closely
       paired activity. Integrated assessments adapt
       current monitoring approaches by taking
       advantage of information that has been
       accumulated over time such as previous
       monitoring results, research that has been
       completed to enhance the measurement of
       indicators, new understanding of  cause and
       effect relationships, and improved sampling
       approaches to reduce uncertainty.
         Research activities must occur at all three
       tiers, but represent distinct research programs.
       Indicator research and development of survey
       methods and tools enhances our ability to
       characterize ecosystem condition  (Tier I).
       Initial monitoring activities to characterize
       (Tier  I) must, of necessity, be based on
       available, tested, proven, and understandable
       indicators. This does not imply that they are
       the best indicators of ecosystem condition, just
       the best available, and continuing research
       should produce better, more certain
       indicators. Cause and effect research drives
       our understanding of what the information
       collected during monitoring represents. This
       research, whether at the larger scale (Tier II)
       or intensive scale (Tier III), provides the
       necessary interpretive information to bridge
       the gap between status and trend  information
       and management actions.
         Prediction of environmental problems is the
       long-term goal of the monitoring and research
       interaction. Currently, our monitoring
       approaches and research  programs must be
       reactive—monitoring results driving the
The Olympic Coast National Marine Sanctuary is recognized for its
profound ecological value. The Sanctuary's parent agency, the National
Oceanic and Atmospheric Administration (NOAA), commits significant
technical resources, including its research ships (like the McArthur, shown
here), to understand how ecological processes work (Photo: Olympic
Coast NMS).
   research agenda and the research results
   modifying the monitoring approach. As cause
   and effect monitoring and research progresses,
   the results will provide the basis for predictive
   modeling, forecasting emerging environmental
   problems, and separating changes due to
   natural variability from those resulting from
   anthropogenic stress. Once forecasting abilities
   can be verified, the interactive roles of
   monitoring and research (particularly at
   Tiers II and III) will change, adapting to these
   new abilities to focus efforts in an unbiased
   manner rather than approaching the coastal
   environment as one large population.
     After characterizing the coastal environment,
   predicting the probability of change from
   human activity, and diagnosing the likely
   causes of these changes, environmental
   managers and stakeholders must make
   decisions on future policies, programs, and
   actions. Decisions include continuation of
   current activity (no action), control of future
   inputs, remediation of environmental
   contamination, or restoration of the coastal
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                                                                Chapter 9    The Future -A National Strategy
ecosystem to a desired state. Some of the
uncertainties associated with these decisions
are based on a lack of understanding of coastal
system response. Research is needed to
support the management decision element of
the integrated assessment model, including:

• Development of standardized protocols for
  environmental remediation and restoration,
  which ensure consistent outcomes.

• Evaluation of costs and effectiveness of
  management actions.

• Development of decision analysis methods
  to help managers establish relevant goals
  and to facilitate consistent cost-effective
  decisions.

  Therefore, research plays a vital role in
interpreting outputs from, and methods used
in, monitoring programs and represents a key
to the integrated assessment model. Research
supports all phases of the assessment process.
Characteristic research activities that support
the integrated assessment process are
described in the remainder of this section.
                                      A Cordell Bank
                                      Expeditions
                                      research diver
                                      over a bed of
                                      filter-feeding
                                      invertebrates.
                                      The food-rich
                                      currents over
                                      Cordell Bank
                                      offer habitat
                                      for filter-feeding
                                      animals (Photo:
                                      Cordell Bank
                                      Expeditions).
Research To Support  Characterization
of the Problem  (Tier I)
  In addition to improving our ability to
document status and trends, research at this
level can also establish a means to provide
early warnings. Ecological characterization is a
description of particular attributes at points in
space and time and comparison of those
attributes with expectations or criteria. It
is clearly impossible to do this for all
environmental parameters and their changes,
so indicators of these parameters are often
sought. Indicators are properties that
summarize elements of environmental change
and provide the greatest information return
for the least investment. The key question  in
indicator research is defining which
parameters serve as appropriate surrogates for
system condition and response. This is  a
challenge because ecosystem processes are
poorly understood, the distribution and
intensity of stressors and their threats to
ecological resources are uncertain, and  it is
not known which stressors place ecosystems at
the most serious risk or the extent to which
critical ecological processes are being
impaired. Another important issue is
reliability/predictability. It is important to
select biological indicators, for example, that
are able to predict stress where stress should
be occurring (due to presence of pollutants) in
a high percentage of cases.
  To help characterize systems, research is
needed to address four basic questions:
• What should be measured? Answering this
  question requires an understanding of the
  important components of structure and
  function of the system (i.e., a conceptual
  model), an evaluation of the appropriate

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Chapter 9    The Future -A National Strategy
         levels of biological organization relevant to
         the monitoring purpose, and the classes of
         stressors that are potentially important for
         that resource and scale.
       • How should the indicator be measured?
         The answer to this question requires that a
         standard protocol be defined.
       • How responsive is the indicator? It is
         important to determine the degree to which
         a particular indicator actually responds to
         various stressor gradients at multiple scales
         or if a stressor indicator responds to
         modification of input.
       • How variable is the indicator? Ecological
         condition reflects the combined effects of
         natural variability and anthropogenic stress.
         Research is needed to determine methods
         by which natural or introduced fluctuations
         can be distinguished  to allow detection of
         actual status and trends in ecological
         conditions.

       Research To  Support Diagnosis of
       Large-Scale Causes  (Tier  II)
         This step determines the causes and
       consequences of detected changes. Cause and
       consequence are usually determined by
       integrating relevant process-oriented research
       with tools to diagnose and predict system
       dynamics. This step determines the causes and
       consequences of detected changes. Cause and
       consequence are usually determined by
       integrating relevant process-oriented research
       with tools to diagnose and predict system
       dynamics. Once conditions and trends for an
       ecological system have been described, it is
       important to identify which parts of the
       system are changing, why they are changing,
and whether particular environmental policies
will be effective in dealing with those changes.
To answer these questions, it is necessary to
understand and be able to predict how a
system will respond to individual or multiple
stresses (i.e., develop a "load-response"
relationship that describes how properties of
concern relate to changes in natural and
human inputs). To couple monitoring results
with causes of system change and to predict
system responses, research must address three
basic questions:
• How are measures extrapolated across
  scales of organization? Historically, much of
  the stressor-effects data used in ecological
  assessment have been obtained from
  laboratory tests focused on responses at
  lower levels of biological organization. An
  implicit assumption  in applying such results
  at the ecosystem level is that processes and
  mechanisms occurring at lower levels of
  organization are sufficient to describe the
  behavior of systems at higher levels of
  organization. This may have limited utility
  to identify properties that emerge only at
  higher levels. Greater understanding is
  needed about how impacts measured at
  lower levels of ecological organization
  reflect impacts at higher levels. Further
  research is also needed to evaluate how
  impacts measured in one estuary can be
  extrapolated to other estuaries.
• How do human activities propagate
  through the ecosystem? For many human
  activities, pathways of transmission and
  adaptation in ecosystems are poorly
  understood, hindering development of
  accurate assessment of ecological effects due
  to human activities. Additional research is
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L
                                                                        Chapter 9    The Future -A National Strategy
         Seagrass is one of the most productive and important ecosystems
         in the Keys, and it is being destroyed at an alarming rate. Much of
         this damage is due to recreational boaters operating in shallow
         water Propeller scars can take up to 10 years to recover
         (Photo: Harold Hudson).
           needed to understand how human-induced
           changes in the landscape alter hydrologic
           and biogeochemical cycles in the coastal
           areas, and how adaptations or buffers in the
           system mitigate those changes.
         • What changes in system structure and
           function are due to changes  in inputs?
           Addressing this question requires a sound
           basis to link an ecological response and a
           change in input. In large, complex systems,
           these links are usually developed based on
           observation of co-occurrence of input and
           response and analysis of the  strength and
           consistency of that co-occurrence. Due to
           lack of appropriate data at large scales, our
           current understanding is insufficient to
           ensure correct identification of the cause of
           change in many systems or to predict the
           result of human activities on an ecosystem.

         Research  To Support Diagnosis  of
         Interactions and  Forecasting (Tier  III)
           This step determines the causes,
         consequences, and interactions  of detected
         changes  at small or local spatial scales,
         particularly with regard to natural
         environmental changes. Cause and
consequence, at this scale, are usually
determined by integrating relevant process-
oriented research at specific locations with
tools to diagnose and predict system
dynamics. The research questions at Tier III
are identical to those at Tier  II with the
exception that at Tier III the scale is local, the
importance of interactions may be greater, and
the role of natural variability may be greater.
Because of this similarity, the specific research
questions for Tier III will not be repeated here.


Research To Support Development
of Policy and  Environmental
Remediation  Programs
  Although this research does not specifically
correspond to one of the monitoring tiers, it is
essential to the integrated assessment process.
This level of research helps to determine if
coastal environmental policies are having the
desired effect, or if the same  goals could be
achieved in another manner. While monitoring
can determine if management actions are
achieving their desired goal,  research is needed
to reduce the uncertainties in ecological cause
and effect relationships—the basis of
predictions. Also, because management actions
often involve behavior modification, it is
important that economic and social consider-
ations, inherent in the decision-making
process, are assessed. Specific questions that
must be addressed include the following:
• How are multiple management options
  evaluated to select the best option? This
  requires development of methods to model
  coastal ecosystem responses to changes so
  that future scenarios under different
  management alternatives can be simulated.

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Chapter 9    The Future -A National Strategy
                                                                  Summary
       • How are ecological services and capital
         reserves valued in the decision process?
         This requires the ability to integrate and
         predict economic consequences of
         ecological change in coastal areas. Methods
         to assess and predict nonmonetary benefits
         and impacts to society, such as aesthetic or
         cultural requirements, are also needed.
       • How is human response to management
         actions measured? Achieving desired results
         from many management decisions rests on
         the willingness and efficacy of humans to
         change behavior. Indicators are needed to
         measure this change in behavior.
         While the objectives and the conceptual
       framework for the Coastal Research and
       Monitoring Strategy have been finalized,
       important aspects of the Strategy can be
       defined only as the Strategy evolves into a
       workable program. The Coastal Research and
       Monitoring Strategy identifies the program-
       matic actions identified by the Workgroup as
       next steps; further development of action
       plans for each of the following recommenda-
       tions and implementation of those recom-
       mendations is beyond the charter of the
       Workgroup.
  This report compiles available
information to describe the overall
ecological condition of the estuarine
waters of the United States. The
characterization is based on the use
of information to create an
impression of existing condition. At
times, that impression is based on
large amounts of information (e.g.,
Chesapeake Bay); at other times, it is
based on a paucity of information
(e.g., Alaska).
  One outcome of this report has
been to demonstrate that we do not
have adequate information to make
clear and encompassing statements
regarding ecological condition for
the nation's coastal resources
regardless of spatial scale (national,
regional, state, estuary). However, it
should also be clear that federal and
state programs exist to collect much
of this information in some areas
but are nonexistent in others. In
order to realize its full potential,
coastal monitoring must be
addressed through new and
innovative partnerships among
federal agencies, state agencies, and
local municipalities. No single
agency can accomplish this task.
Only through a coordinated and
integrated effort can coastal
monitoring be successful at all the
levels at which it is necessary to
preserve, protect, manage, and
enhance the coastal resources
of the United States.
       We are all drawn to the ocean's edge to wonder at life's most
       basic questions and marvel at the ocean's astonishing diversity
       (Photo: Olympic Coast NMS).
      National Coastal Condition Report

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References

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