Pugef Sound Estuary Program
EVERETT HARBOR
ACTION PROGRAM:

Analysis of Toxic Problem Areas
TC-3338-26
FINAL REPORT

September 1988

Prepared by
PTI Environmental Services
and
TetraTech, Inc.

Prepared for
U.S. Environmental Protection Agency
Region X - Office of Puget Sound
Seattle, Washington

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TC-3338-26
Final Report
EVERETT HARBOR ACTION PROGRAM:
ANALYSIS OF TOXIC PROBLEM AREAS
for

U.S. Environmental Protection Agency
Reg-fon X, Office of Puget Sound
Seattle, WA  98005
September 1988
by

PTI Environmental Services
3625 - 132nd Avenue S.E., Suite 301
Bellevue, WA  98006

and

Tetra Tech, Inc.
11820 Northup Way, Suite  100
Bellevue, Washington  98005

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                                  CONTENTS


                                                                        Page

LIST OF FIGURES                                                          vi

LIST OF TABLES                                                            x

ACKNOWLEDGMENTS                                                         xii

EXECUTIVE SUMMARY                                                       xvi

INTRODUCTION                                                              1

     SITE DESCRIPTION                                                     4

     DRAINAGE PATTERNS                                                    6

     STUDY AREAS                                                          7

METHODS                                                                   9

     DECISION-MAKING FRAMEWORK                                            9

          Overview                                                        9
          Chemical, Biological, and Toxicological Indices                12
          Action Assessment Matrix                                       18
          Action-Level Guidelines                                        20
          Ranking of Problem Areas                                       22
          Quantitative Relationships                                     25
          Spatial Resolution of Effects                                  28
          Source Evaluation                                              31

     OVERVIEW OF FIELD STUDY DESIGN                                      31

          Station Locations                                              31
          Data Analysis Methods                                          38

     SEDIMENT CHEMISTRY                                                  45

          Field Sampling                                                 45
          Laboratory Analysis for Metals                                 47
          Laboratory Analysis for Semi volatile Organic Compounds         48
          Laboratory Analysis for PCBs                                   51
          Laboratory Analysis for Chlorinated Pesticides                 53
          Laboratory Analysis for Resin Acids and Chlorinated
            Phenols/Guaiacols                                            54
          Laboratory Analysis for Volatile Organic Compounds             59
          Ancillary Analyses                                             59
          Quality Assurance/Quality Control Results                      60

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     BIOACCUMULATION                                                     69

          Field Sampling                                                 69
          Laboratory Analysis for Mercury                                70
          Laboratory Analysis for PCBs/Pesticides                        71
          Quality Assurance/Quality Control  Results                      72

     SEDIMENT BIOASSAY                                                   73

          Field Sampling                                                 73
          Laboratory Analysis                                            73
          Quality Assurance/Quality Control  Results                      75

     BENTHIC MACROINVERTEBRATES                                          75

          Field Sampling                                                 75
          Laboratory Analysis                                            77
          Quality Assurance/Quality Control  Results                      78

     FISH ECOLOGY AND HISTOPATHOLOGY                                     78
          Field Sampling                                                 79
          Laboratory Analysis                                            79
          Quality Assurance/Quality Control  Results                      80

     DATA MANAGEMENT                                                     81

          Data Organization                                              81
          Data Analysis                                                  82
          Data Entry and Quality Control                                  82

RESULTS                                                                  84

     SEDIMENT CHEMISTRY                                                  84

          Normalization of Chemical Concentrations                       85
          Bulk Sediment Characteristics                                  87
          Sediment Chemistry:  Metals                                    97
          Sediment Chemistry:  Organic Compounds                         103
          Comparison with Recent Historical  Data                         145
          Summary                                                        155

     BIOACCUMULATION                                                     157

          Mercury in Dungeness Crabs                                     158
          PCBs and Pesticides in Dungeness Crabs                         158
          Mercury in English Sole                                        160
          PCBs and Pesticides in English  Sole                            162
          Comparison with Recent Historical  Data                         163
          Summary                                                        163

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     •    Benthic Infauna

               Polychaete abundance
               Crustacean abundance
               •Pelecypod abundance
               Gastropod abundance

     •    Fish Pathology

               Lesion prevalence in livers of English sole.

The rationale for using  the  five  general  kinds  of data is provided in Tetra
Tech (1985a,b).  The available Puget Sound AET (Tetra Tech 1986c, 1987) were
used  as  sediment  quality  values  to  evaluate  chemical   data   relative  to
predicted  biological   effects   (see   below,   Quantitative  Relationships).
Although  many other  variables  were evaluated  throughout the decision-making
process,  those  shown  above formed the basis  for  problem  identification and
priority  ranking.

Target Chemicals—

     A  list  of  chemical  contaminants analyzed  for in sediments  collected
during  the  Everett  Harbor studies  is  given  in Table  1.   Most  of  the sub-
stances  on  this  list  have  at  least  one of  the  following  two  properties:
they can  bioaccumulate, possibly with adverse biological effects in the food
chain if  bioaccumulated, or they can produce adverse biological  effects even
when not  bioaccumulated.   EPA  priority pollutants that may  be  currently or
historically  discharged  into  the  study area  are  included on the  list.
Compounds not  on the  EPA list of  priority pollutants also have  been con-
sidered on the  basis of  their  local  significance.  For example,  resin acids
and chlorinated  phenolic  compounds may originate from  pulp  and  paper mills
in the  project  area.   In  water and effluent bioassays,  such  compounds may
induce  a  variety of toxic biological  responses,  from  sperm disfunction in
sea urchins  (Cherr  et al. 1987)  to mutagenicity (e.g.,  Kinae  et  al. 1981)
and acute lethality in salmonids (e.g., Leach and Thakore 1973,   1975,   1977).
Bioaccumulation of  chlorinated phenolic compounds  has  also been documented
(e.g.,   Landner  et al.  1977).  Tributyltin  (TBT),  an antifouling agent, was

                                     13

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              TABLE 1.  LIST OF CONTAMINANTS AND CONVENTIONAL
             VARIABLES  FOR  ANALYSIS  IN EVERETT HARBOR PROJECT
Low Molecular Weight PAH
   naphthalene
   acenaphthylene
   acenaphthene
   fluorene
   phenanthrene
   anthracene

High Molecular Weight PAH
   fluoranthene
   pyrene
   benz(a)anthracene
   chrysene
   benzofluoranthenes (b and k)
   benzo(a)pyrene
   indeno(l,2,3-c,d)pyrene
   dibenzo(a,h)anthracene
   benzo(g,h,ijperylene

Total PCBs

Neutral Halogenated Compounds
   1,2-dichlorobenzene
   1,3-dichlorobenzene
   1,4-dichlorobenzene
   1,2,4-tri ch1orobenzene
   hexachlorobenzene (HCB)
   2-chloronaphthalene
   hexachlorobutadiene
   hexachloroethane

Phthalate Esters
   dimethyl phthalate
   diethyl phthalate
   di-n-butyl phthalate
   butyl benzyl phthalate
   bi s(2-ethy1hexyl)phthalate
   di-n-octyl phthalate

Pesticides
   p,p'-DDE
   p,p'-ODD
   p,p'-DDT
   aldrin
   chlordane
   dieldrin
   endrin
   endosulfan I
   endosulfan II
   endosulfan sulfate
   endrin ketone
   heptachlor
   hepachlor epoxide
   alpha-HCH
   beta-HCH
   delta-HCH
   gamma-HCH (lindane)
   methoxychlor
   toxaphene

Phenol  and Alkyl-Substituted Phenols
   phenol
   2-methylphenol
   4-methylphenol
   2,4-dimethylphenol
   4-chloro-3-methylphenol

Chlorinated Phenols/Guaiacols
   2-chlorophenol
   2,4-dichlorophenol •
   2,4,6-trichlorophenol
   2,4,5-trichlorophenol
   2,3,4,6-tetrachlorophenol
   pentachlorophenol
   3,4,5-trichloroguai acol
   4,5,6-trichloroguaiacol
   tetrachloroguaiacol

Resin Acids
   abietic acid
   dehydroabietic acid
   12-chlorodehydroabietic acid
   14-chlorodehydroabietic acid
   dichlorodehydroabietic acid
   isopimaric acid
   neoabietic acid
   sandaracopimaric acid

Nitrogen-Containing Compounds
   N-nitrosodi-n-propylamine
   N-nitrosodiphenylamine
   nitrobenzene
   2-nitrophenol
   4-nitrophenol
                                    14

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TABLE 1.  (Continued)
   2,4-dinitrophenol
   4,6-dinitro-2-methylphenol
   4-chloroaniline
   2-nitroaniline
   3-nitroaniline
   4-nitroaniline
   2,4-dinitrotoluene
   2,6-dinitrotoluene
   3,3'-dichlorobenzidine

Halogenated Ethers
   bi s(2-chloroethy1)ether
   bis(2-chloroisopropyl)ether
   bi s(2-chloroethoxy)methane
   4-chlorophenyl phenyl ether
   4-bromophenyl phenyl ether

Miscellaneous Extractable Compounds3
   2-methylnaphthalene
   dibenzofuran
   benzyl alcohol
   benzoic acid
   isophorone
   hexachlorocyclopentadiene

Volatile Organic Compounds
   acetone
   benzene
   bromodi ch1oromethane
   bromoform
   bromomethane
   2-butanone
   carbon disulfide
   carbon tetrachloride
   chlorobenzene
   chloroethane
   2-chloroethylvinyl ether
   chloroform
   chloromethane
   di bromoch1oromethane
   dichloromethane
   1,1-dichloroethane
   1,2-dichloroethane
   1,1-dichloroethene
   trans-1,2-dichloroethene
   1,2-dichloropropane
   cis-l,3-dichloropropene
   trans-l,3-dichloropropene
   ethyl benzene
   4-methyl-2-pentanone
   2-hexanone
   styrene
   1,1,2,2-tetrach1oroethane
   tetrachloroethene
   1,1,1-trichloroethane
   1,1,2-trichloroethane
   trichloroethene
   toluene
   total  xylenes
   vinyl  acetate
   vinyl  chloride

Metals
   antimony
   arsenic
   cadmium
   chromium
   copper
   iron
   lead
   manganese
   mercury
   nickel
   selenium
   silver
   zinc
   tributyltin

Conventional  Variables
   total  organic carbon
   total  solids
   percent fine-grained material
   total  nitrogen
   water-soluble sulfides
a  Fifteen  tentatively  identified  organic  compounds  were also  analyzed  and
are listed in the Results section.
                                    15

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analyzed  in  samples from the  Everett marina and Port  Susan  because of
high toxicity  and association with marinas.   Several  conventional sediment
quality variables  were measured [e.g., total  organic  carbon  (TOC) content,
grain  size].   These  conventional   variables  provide  a means  of comparing
areas with different  bulk chemical or physical  properties.   Also, observed
biological effects could result from a characteristic of the system unrelated
to the selected organic compounds or metals  of concern  (e.g.,  the  deleterious
effects of sediment anoxia on benthic communities).

     The  target contaminants measured during the Everett Harbor project have
the  potential  to  cause  observed  sediment  toxicity or biological  effects.
However,  the  ability  to  identify poorly-understood  chemical  interactions
(e.g.,  synergism  and antagonism)  is  limited.   Although interactive effects
may  not be distinguishable from other kinds of effects, they  may  be measured
through the use of  biological indicators explained below.

Biological Variables--

     Selection  of  individual   biological  and  -toxicological  variables  was
based  on  the following considerations:

     •   Analysis  of several levels of potential biological  effects

               Bioaccumulation at  the tissue  level
               Pathology  at the tissue level
               Mortality  of amphipods in sediment bioassays
               Chronic effects on  benthic communities

     •    Use of each variable in  past Puget Sound studies

     •    Documented sensitivity of each variable to contaminants

     •    Ability  to quantify  each variable  within  the  resource and
          time constraints of the  program.
                                     16

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Response  variables were  selected to  characterize  several  important toxic
effects  in  resident  organisms  of  Everett  Harbor.   Although  a  study of
effects on  fish  populations was beyond the  scope  of  the current project, a
study of  effects  on individual fishes  is  possible  through an assessment of
liver lesion  prevalence.   Benthic macroinvertebrates  were selected because
of  their  sensitivity to  sediment contamination,  their  importance  in local
trophic relationships, and their ability to establish site-specific response
gradients relative to sediment contamination.

     The  use  of  Rhepoxvnius  abronius to  determine  the acute  lethality of
field-collected  sediments has  been  documented by  numerous  authors  (e.g.,
Swartz et  al.  1982,  1985; Chapman et al.  1982a,b;  Mearns et al. 1986).  The
use  of this   amphipod  species  as an  indicator  of  contaminated  areas  is
supported  by  its  typical absence  from natural populations  in  such  areas
(Swartz et  al.  1982;  Comiskey et al.  1984),  and by its response to contami-
nated  sediments   in  laboratory studies  (Swartz et al.  1985).    Because of
potential  concerns that  uncontaminated  fine-grained  sediments  may  induce
amphipod  mortality,  the  data  collected during  the "present  study  were
screened  to  ensure  that  statistically significant toxicity  could  not  be
accounted for  by  grain-size effects alone.

Elevation Above Reference Indices--

     Environmental  quality  indices  were  developed to  rank areas  based  on
observed contamination and biological effects.  The indices have the general
form of  a ratio  between  the  average value  of  a  variable at a  site  in  the
Everett Harbor system  and  the  value  of  the same  variable at  a reference
site.  The ratios  are structured so that the value of the index increases as
the  deviation from  reference  conditions  increases.    Thus,  each  ratio  is
termed an  Elevation Above  Reference  (EAR)  index.   For  most  variables,  the
measured average  value  at the study  site  is  divided by the average value at
the reference  area to obtain  the EAR.   For benthic infauna, EAR are derived
as  the  inverse ratio of  values  (i.e.,  reference divided  by  Everett  Harbor
site) to reflect the magnitude of depressed abundances of benthic organisms.
Chemical  effects  on infauna  are  expected  to be manifested  as  decreases in
taxa abundance relative  to reference.   An increase in  the  EAR for infauna
                                     17

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would therefore  reflect  a  decrease in absolute value of the variable but an
increase in adverse effect  relative to reference conditions.

     It  should  be noted that these  indices were  not  used in  lieu of the
original data  (e.g.,  contaminant  concentrations),  but  in addition to  these
data.   The  original  data  were used  to  identify  statistically  detectable
increases  in  sediment  contamination,  sediment   toxicity,   or   biological
effects, and  to  determine quantitative relationships among these  variables.
The  EAR indices were  used  to  reduce  large  data  sets  into  interpretable
numbers  that reflect  the magnitudes of the different variables among areas.

Action  Assessment Matrix

     The environmental   contamination  and  effects  indices  (i.e.,  EAR)  were
organized  into  an Action  Assessment  Matrix used to compare  study  areas or
stations.   A simplified hypothetical  example of an  Action Assessment  Matrix
is  shown in Table  2.   This  example matrix  is  presented to demonstrate how
 information  from  multiple  indicators  can  ' be  .integrated  for  an   overall
evaluation  and prioritization of  different  study  areas.   For this  example,
only general  indices such as "sediment contamination",  or "benthic  macro-
 invertebrates"   are   used.    In  the  actual   application  of  the  approach,
multiple indices for specific types of sediment  contamination were  evalu-
 ated,   including  separate  measures  for organic  compounds and  metals  (see
 Prioritization of Problem  Areas and  Contaminants).  Similarly, the  benthic
macroinvertebrates  category   was  replaced  by  more  specific  measures of
 benthic community  structure.

      Evaluation  of information in this format enables the decision-maker to
 answer the following  questions:

      •    Is there  a significant increase  in  sediment  contamination,
           sediment  toxicity,.  or  biological effects  at any study  site?

      •    What combination of indicators is  significant?
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              TABLE  2.   THEORETICAL  EXAMPLE  OF  ACTION ASSESSMENT MATRIX3
EAR Values for Study Sites
Indicator
Sediment contamination
Toxicity
Bioaccumulation
Pathology
Benthic macroin vertebrates
A B

1,300

8.5

900

5.2

4.0
45
2.0
20
2.6
1.2
C D E Reference Value


800

10.0

1,100

8.0

5.0


75

4.5

200

2.8
1.3
8 1,000 ppb
2.2 10% mortality
13 10 ppb
2.0 5% prevalence
1.1 60 individuals/m^
a EAR values  for indicator variables are  shown  for  Sites  A-E.   Benthic macroinverte-
brate factors  represent  the  reduction in  numbers  of  individuals  at the  study  site
relative  to the  reference site.    Factors  for  all  of the  other  indices  represent
increases relative to the reference site values shown.

I    1 - Indicates 'indicator v.alue  for the  specified  area  is  significantly different
from reference value.
                                         19

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     •    What  are  the  relative  magnitudes  of  the elevated  indices
          (i.e., which represent the greatest relative hazard)?

     The term "significant" is generally used in this report to mean statis-
tically significant at  the 99.9 percent  confidence level  (alpha  = 0.001).
With the exception of  sediment chemistry,  significance of  an EAR was based on
statistical  comparisons  of  variables  between  contaminated  sites  and  the
reference  area.   Because  replicate  data for  sediment  chemistry  were  not
collected  at  every  station,  an  alternative criterion for  significance  was
developed.   Following the approach  used earlier  in  Commencement  Bay  and
Elliott Bay  (Tetra  Tech 1985a;  PTI  Environmental  Services  (PTI)  and Tetra
Tech  1988), a significant elevation of a chemical concentration in  sediments
was  defined  as  exceedance  of the maximum concentration of  that chemical in
all  Puget Sound reference areas.

Action-Level Guidelines

 4    The decision to evaluate potential.sources  of contamination and the need
for  possible remedial  alternatives applies only to those sites that exceed a
minimum  action  level.   An "action  level"  is  a  level  of  contamination or
effects that defines  a problem area.  It is assumed that an area requires no
action  unless at  least  one of the  indicators  of contamination, toxicity.- or
biological effects  is significantly elevated above reference levels.

      The  action levels used  to  define  problem areas in  the Everett Harbor
system  are  shown  in Table  3.   The  action-level  guidelines are summarized as
follows:

      •     Significant  elevation  above  reference   for  THREE  OR   MORE
           INDICES  identifies  a  problem  area  requiring  evaluation of
           sources and potential  remedial  action

      •     For  ANY  TWO  INDICES  showing  significant  elevations,  the
           decision  to proceed with  source  and  remedial  action evalua-
           tions  depends  on  the  actual  combination of  indices and the
           degree to which  they are site-specific
                                     20

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                              TABLE  3.   ACTION-LEVEL GUIDELINES
               -Condition  Observed
     Threshold Required for Action
      Any  THREE OR MORE significantly  elevated
      indices3

      TWO  significantly elevated  indices

      1.  'Sediments  contaminated,  but  below
          HAET and 90th percentile PLUS:

          Bioaccumulation  elevated relative  to
          that at  the  reference area,  OR

          Sediment toxicity with   no more  than
          40%  mortality, OR

          Benthic  community structure indicates
          altered   assemblage,  but  less   than
          80%  depression

      2.   Sediments  contaminated  but   below
          HAET  and   90th   percentile   PLUS
          elevated fish pathology
III.   SINGLE significantly  elevated  index

      1.   Sediment  contamination
      2.   Sediment  toxicity

      3.   Benthic community structure

      4.   Fish  pathology  OR bioaccumulation
Threshold exceeded,  continue  with source
and remedial action evaluation.
No immediate action.   Recommend site for
future monitoring.
Threshold for  source  evaluation  exceeded
if elevated  contaminants are  considered
to be  biologically available.    If  not,
recommend site for future monitoring.
If the magnitude of contamination exceeds
the 90th  percentile for all  study  areas
or  the  HAET,   proceed  with  source  and
remedial action evaluation.

Greater than 40% response (mortality).

80% depression or greater.

Insufficient   as   a   sole   indicator.
Recommend  site  for  future  monitoring.
Check adjacent   areas   for   significant
contamination, toxicity,   and/or   bio-
logical effects.
 a  Combinations  of significant  indices  are  from  independent  data types  (i.e.,  sediment
 chemistry, bioaccumulation,  sediment  toxicity,  benthic  infauna, fish pathology).

 Significant  indices are  defined  as  follows:

   Sediment  Chemistry  = Chemical  concentration  at  study  site  exceeds  highest  value
   observed  at  all  Puget Sound  reference  areas.

   Sediment  Toxicity, Benthic  Infauna, Bioaccumulation,  and  Pathology =  Statistically
   significant  difference between  study area  and reference area (PO.001)  at  one or more
   stations  within  area.
                                            21

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     •    When only a SINGLE INDEX is significantly elevated,  a problem
          area may  be defined when additional criteria are met  (i.e.,
          the magnitude of the index is sufficiently above the signifi-
          cance threshold to warrant further evaluation).

     Significant sediment toxicity or  biological effects  may  occur in areas
without apparent contamination by toxic substances.  In such  cases, it would
be important to evaluate the possibility that the observed conditions result
from variables not measured  in  the  field  studies.   An  attempt would be made
to  distinguish  the  biological   problem  area from surrounding areas  using
chemical  characteristics,  and  to  identify  sources  based on  these distin-
guishing chemical characteristics.

     The  action-level  guideline based on exceedance of the  90th  percentile
concentration of  a chemical  in sediments was  applied only  to  chlorinated
phenols/guaiacols and  resin  acids.    None  of these  compounds  has  an estab-
lished AET.  Application of  the 90th  percentile  guideline to data for other
chemicals  was  considered   inappropriate   for problem area  identification
because  of  availability of  AET or  relatively  narrow  concentration ranges
observed for a number of chemicals.  For example, the 90th percentile values
for  most metals  were  below or only  slightly   elevated  above Puget  Sound
reference conditions.   Stations identified  as  problem areas  based only on
exceedance  of the  90th percentile  concentrations  for  selected  chemicals
(chlorinated phenols/guaiacols and  resin  acids) were designated as relatively
low-priority problem areas.

Ranking of Problem Areas

     Ranking of problem areas was  based  on a systematic method of  assigning
scores to sampling  sites based  on  the significance and severity (i.e.,  EAR)
of  the various  chemical  and biological  variables.   Criteria for scoring
problem  areas  in terms  of  priority  for evaluation  of sources and  remedial
actions  are  shown  in  Table  4.   Based on  these  criteria,  higher priority
would  be  assigned to  an area with  many elevated indices  (i.e., EAR) than to
an area  with  few.   Because the  values of the individual  indices are assumed
                                     22

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             TABLE 4.   SUMMARY OF SCORING CRITERIA FOR SEDIMENT
         CONTAMINATION,  TOXICITY, AND BIOLOGICAL EFFECTS INDICATORS
     Indicator
           Criteria
Score
Metals (one or more)
Organic Compounds
(one or more)
Toxicitya



Macroinvertebrates^
Bioaccumulation
(fish muscle)
Fish Pathology0
Concentration not significant
Significant; EAR <10
Significant; EAR 10-<50
Significant; EAR 50-<100
Significant; EAR >100

Concentration not significant
Significant; EAR <10
Significant; EAR 10-<100
Significant; EAR 100-<1,000
Significant; EAR >1,000

No significant bioassay response
Amphipod bioassay significant
>40% response in bioassay

No significant depressions
1 significant depression
2 significant depressions
>3 significant depressions
>95% depression for >1 variable

No significant chemicals
1 significant chemical
2 significant chemicals
>3 significant chemicals
EAR >50 for >1 chemical

No significant lesion types
1 significant lesion type
O f"TrtMTTH^'ni«4» I /•* r» ^ AM -^ \ If* f*f*
                             J.  .J I U I I I I I V*UI I l«  I V*.J I VSI I  I* ₯ M^*
                             2  significant  lesion  types
                             >3 significant lesion  types
                             >5% prevalence of hepatic n
                          neoplasms
  0
  1
  2
  3
  4

  0
  1
  2
  3
  4

  0
  2
  4

  0
  1
  2
  3
  4

  0
  1
  2
  3
  4

  0
  1
  2
  3
  4
a Toxicity based on  amphipod mortality  bioassay.

b Variables considered were polychaete abundance, crustacean abundance, gastropod
abundance, and pelecypod  abundance.

c  Lesions considered  were hepatic  neoplasms,  foci  of cellular  alteration
(preneoplastic nodules),  and megalocytic  hepatosis.
                                    23

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to represent relative environmental hazards, areas with higher values of the
indices are  scored  higher.   Two  ranking  schemes  were used.   The first used
sediment chemistry indicators only, primarily to characterize the extent and
magnitude  of contamination.  The second  used all  biological  indicators to
measure  the  response  to  chemical  contamination.   For  ranking  based  on
biological variables, scores for  bioaccumulation and pathology were assigned
to each subtidal  station based on trawl  data  for the corresponding area in
which  the  station was  located.   Biological scores  for intertidal  stations
were based only on the  results of the amphipod bioassay since other biologi-
cal variables were not  measured  at intertidal  stations.  Scores  assigned to
a  station for  individual  biological  indicators   (i.e.,  bioassay,  infauna,
bioaccumulation,  pathology) were  summed  to  obtain an  overall   biological-
effects  score for the  station.    The  total biological-effects  score for  a
station  was  normalized  to  the maximum possible  score attainable  with the
available  data.    This   normalization  step  was  necessary to  avoid  biasing
ranks  for some study areas towards  lower  values  just because certain data
were  missing.   The  maximum possible score for biological  effects  when all
variables  were measured  was  16   (=  sum  of 4  for amphipod  bioassay,  4 for
benthic  macroinvertebrates, 4 for bioaccumulation,  and  4  for   pathology).
The  range  of possible normalized scores  for biology was 0-100 (expressed as
a  percentage).   The various areas were then  ranked according to the magni-
tudes  of  their overall  biological-effects scores.

      Similarly,  scores  assigned  to the sediment chemistry indicators  (i.e.,
metals and  organic  compounds)  were  summed and  normalized  to  the maximum
possible  score to  obtain an overall chemical-contamination  score  for each
station.   The maximum possible score for sediment  chemistry was 8 (= sum of  4
for  metals and  4 for organic compounds).   A ranking of problem  stations was
then  developed based on their relative chemical-contamination scores.

      Individual  stations that  exceeded action-level guidelines were  grouped
into  problem areas based on consideration of the following factors:

      •    Chemical distributions  (including data from  recent historical
           studies)
                                     24

-------
     •    Nature and proximity of potential sources

     •    Geographic and hydrographic boundaries.

Historical stations with contaminant concentrations exceeding the  highest AET
(HAET)  were  included  in  the  problem areas.   Historical  stations showing
lowest AET (LAET) exceedances were included only if they were contiguous with
problem areas defined in the present study.

     Total chemical and biological scores for  each  multi-station problem area
were  calculated  as  the  averages  of the  corresponding  total   scores  for
individual stations within the area.  If the final  ranking based on biologi-
cal effects  for a single  station or a  multi-station  problem area differed
substantially from that based on  sediment chemistry, then the higher-ranking
score was given  precedence.   Thus,  some  high  priority sites were designated
strictly  on  the  basis  of chemical  contamination (i.e.,  no  corresponding
biological  problems  apparent)  or  strictly   on   the  basis  of  biological
conditions ("i.e., no chemical contamination apparent).

Quantitative Relationships

     The  development  of quantitative relationships among possible causative
factors,  sediment   toxicity,   and  benthic  effects   identifies   threshold
concentrations  above which  changes  in the biological  indicators are detect-
able.    The  basic  concept  of  increased  biological  effects  or  sediment
toxicity  resulting from  increased  concentrations  of  a  single chemical  in
sediments is depicted in Figure 4.  Four study areas that have statistically
elevated effects are shown in the figure.  Although there is an elevati'on in
contamination relative to reference conditions at  four of the remaining five
study areas, there are no statistically  detectable increases  in  the effect
indicator above background conditions.  Thus, the  level of sediment contami-
nation  corresponding to  Area X  (arrow)  represents  an  apparent threshold
above which  significant effects  occur.   The contamination  of  sediments  by
multiple  chemicals  may  result  in  a more  complex  relationship  than  the
example in Figure  4.   Such.relationships are discussed in detail  later (see
Contaminant,  Toxicity, and Biological Effects Relationships).
                                     25

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i
 •o
                                          Area Z
 -                                  Area X
 u
 UJ

                                                    Area Y
                                         Area W
       o
                                       A


             A

                              A

         O          A
                   £V          .  Average Reference Index
        ._               _^.
                       Sediment Concentration
                           of Contaminant
                            O   Reference

                            A   Everett Harbor, not statistically significant

                            A   Everett Harbor, statistically significant at
                                the 99.9% confidence level (a- 0.001)
Figure 4.  Theoretical example of relationship between sediment
           contamination and an effects index.
                              26

-------
     AET  have  been  identified  using  synoptic chemical  and  biological data
sets from throughout  Puget  Sound  (Tetra  Tech  1986c,  1987).   Puget Sound AET
are used in this study to identify potential problem areas based on chemical
data collected  in  previous  studies  (e.g.,  U.S.  EPA 1982; U.S.  Department of
the Navy  1985)  where appropriate  biological  data were unavailable.   The
concept of AET  and the data sets used in  deriving AET are  explained below.
The Everett Harbor data collected during this study are being compiled along
with other recent data from Puget Sound into the EPA Sediment Quality Values
database  (SEDQUAL).   This database  will  be used as part of an ongoing study
to update Puget Sound AET.

     The  focus  of the  AET  approach  is  to identify concentrations  of con-
taminants that are associated exclusively with sediments  having statistically
significant biological effects (relative  to appropriate reference sediments).
Thus,  to  generate  AET values,  chemical data are classified  according to the
absence or presence of significant biological effects to  determine concentra-
tions ' of  contaminants  above  which  statistically  significant  biological
effects would always  be expected to occur.   AET were originally developed to
identify  problem  sediments  in  the  Commencement Bay  Nearshore/Tideflats
Remedial  Investigation  (Tetra Tech  1985a).    AET  have been  subsequently
revised with an expanded database (200 stations) and their accuracy has been
evaluated  using  biological  and  chemical   data  for geographically  diverse
areas of  Puget  Sound  (Tetra Tech  1986c,  1987).   The AET method and accuracy
tests based on  Puget  Sound data are described in detail  in those documents.

     AET have been established  for  64 organic  and  inorganic toxic chemicals
using matched chemical and biological  data  for several  biological indicators
and embayments  in Puget Sound.   Because of patchy  biological  and chemical
conditions in  the environment, it  was  important  that chemical  analyses  be
performed on the same or nearly the same sediment  that was used in bioassays
and benthic infaunal  analyses.  AET are available  for predicting significant
effects based on the  following biological indicators:
                                     27

-------
     •    Depressions in abundances  of major taxonomic  groups  of
          benthic infauna (i.e., Crustacea,  Mollusca,  Polychaeta,
          and total  abundance)

     •    Amphipod mortality bioassay using Rhepoxvnius abrom'us

     •    Oyster  larvae abnormality . bioassay  using  Crassostrea
          diaas

     •    Microtox bioluminescence  bioassay using  Photobacter'ium
          phosphoreum.

For  each  chemical,  a separate AET  was  developed for  each  biological  indi-
cator, resulting in four sets of AET.   A list of the different AET generated
thus  far  for Puget Sound is  provided  in Table  5,  along with  the  LAET and
HAET among these four indicators.   The  derivation of these  AET is described
in more detail in Tetra  Tech (1986c).

     The AET  method  has been shown to be  sensitive  in correctly predicting
impacted stations in Puget  Sound,  but in doing so the approach also predicts
impacts at some  stations that do not demonstrate adverse effects [i.e., the
approach  is  not  completely  efficient in identifying  only impacted  stations
(Tetra Tech  1986c)].  Because the  objective  for  using AET in this study was
to  identify  potential  problem chemicals  and problem  areas  (in conjunction
with  action   level   guidelines),   the   ability   to  correctly   predict  most
impacted  stations  (sensitivity)   is  more  important  than   the ability  to
predict only impacted stations (efficiency).

Spatial Resolution of Effects

     Using  the  Action  Assessment  Matrix,  contamination and  effects  were
analyzed  at  several  levels  of spatial  resolution (e.g.,  study  areas within
the  project   area  or individual  stations).  Detailed examination  of  each
sampling  station was necessary  because spatial  heterogeneity  of  sediment
contamination  was   relatively   high.    Quantitative   relationships  among
sediment  contamination,  sediment  toxicity,  and benthic macroinvertebrates
                                     28

-------
              TABLE  5.   PUGET  SOUND AET  (DRY WEIGHT)a-b
(ug/kg dry weight  for  organic  compounds; mg/kg dry weight for metals)
Chemical
Low molecular weight PAH
naphthalene
acenaphthylene
acenaphthene
f 1 uorene
phenanthrene
anthracene
High molecular weight PAH
fluoranthene
pyrene
benz( a) anthracene
chrysene
benzofl uoranthenes
benzo(a)pyrene
i ndeno( 1 , 2 , 3-c , d) pyrene
dibenzo(a,h)anthracene
benzo(g,h,i jperylene
Total PCBs
Total chlorinated benzenes
1 ,3-dichlorobenzene
1 , 4-di chl orobenzene
1 , 2-di chl orobenzene
1 , 2 , 4-tri chl orobenzene
hexachl orobenzene (HCB)
Total phthalates
dimethyl phthalate
di ethyl phthalate
di-n-butyl phthalate
butyl benzyl phthalate
bis(2-ethylhexyl ) phthalate
di-n-octyl phthalate
Pesticides
p,p'-OOE
p,p'-ODO
p,p'-ODT
Phenol s
phenol
2 -methyl phenol
4-methyl phenol
2,4-dimethylphenol
pentachl orophenol
2-methoxyphenol
Miscellaneous extractables
hexachl orobutadi ene
1 -methyl phenanthrene
2 -methyl naphtha 1 ene
biphenyl
dibenzothiophene
dibenzofuran
benzyl alcohol
benzole acid
N-ni trosodi phenyl ami ne
Amphipod
AET6
S.SOOg'IV1
2,400"''
560h i
980h.i
i.aooP1!
5.400h>' .
1.90Q9'"'1
38,00o{j'i
9,800*'!
ll.OOOP'!
3, flOOd'!
5,000"''
3,700
2,400. .
880!''1
sio;"'!
860h''
2.5001
6801
>170
260
>350
51
130 .
>5,20oi'.
>700£'!
>1,200"'1
>5,100
>470
>3,100.
>5901

IS
43
3.9

670h''
63
1,200
>72n.i
>140
930

290
310
670
260
240
540
73
>690
220
Oyster
AETa
5,200'
2,100
>560
500
540
1,500
960
17,000
2,500
3,300
1,600
2,800
3,600
1,600
690
230
720
1,100
400
>170
120
50
64
230
3,400'
160
>73
1,400
>470
1,900
>420

—
—
>6

420
63
670
29
>140
930

270
370
670
260
240
540
73
650
130
Benthic
AETe
6,100'
2,100.
640 '
500.
640]
3,200!
1,300'
>sr,ooo!
6,300!
>7,300!
4,500!
6,700]
8,000!
6,800!
>5,200!
1,200!
5,400'
1,100
400
>170
120
50
64
230
>70,0001
160. .
200"-'
>5,100
470
1,900.
>68,000'

9
2.
11'

1,200
>72
670
29
>140
930

270
370
670
270
250
540
73
650
75
Microtox
AETr
5,200
2,100
>560
500
540
1,500
960
12,000
1,700
2,600
1,300
1,400
3,200
1,600
600
230
670
130
170
>170
110
35
31
70
3,300
71
>48
1,400
63
1,900
—

--
—
—

1,200
>72
670
29
>140
930

120
370
670
270
250
540
57
650
40
LAET
5,200
2,100
560
500
540
1,500
960
12,000
1,700
2,600
1,300
1,400
3,200
1,600
600
230
670
130
170

110
35
31
70'
3,300
71
200
1,400
63
1,900


9
2
3.9

420
63
670
29

930

120
310
670
260
240
540
57
650
40
HAET
6,100
2,400
640
980
1,800
5,400
1,900
38,000
9,800
11,000
4,500
6,700
8,000
6,800
880
1,200
5,400
2,500
680

260
50
64
230
3,400
160
200
1,400
470
1,900


15
43
11

1,200
63
1,200
29

930

290
370
670
270
250
540
73
650
220
                             29

-------
TABLE 5.  (Continued)
      Chemical
Amphipod      Oyster    Benthic     Microtox
  AET6         AET3       AETe        AEV       LAET      HAET
Volatile organics
   tetrachloroethene                   >210.           140        140         140       140       140
   ethyl benzene                         >50             37         37          33        33        37
   total xylenes                       >160            120        120         100       100       120
Metals
antimony
arsenic
cadmium
chromium
copper
lead
mercury
nickel
silver
zinc

5.3
93
6.7
>130.
800]
700]
2.11
>120l
>3.7]
8701

26
700
9.6
>37
390
660
0.59
39
>0.56
1,600

3.2
85
5.8
59
310
300
0.88
49
5.2
260

26
700
9.6
27
390
530
0.41
28
>0.56
1,600

3.2
85
5.8
27
310
300
0.41
28
5.2
260

26
700
9.6
59
300
700
2.1
49
5.2
1,600
 a  ">"  indicates  that  a  definite  AET could  not  be established  because the  highest concentration
 occurred  at a  station  without biological  effects (hence,  it  is not  clear from  available data  if
 biological  effects always  occur  above this concentration,  as  specified in the  definition of AET).
 For  the purposes  of problem identification in Elliott Bay, these values were excluded when  LAET  (low
 AET)  and  HAET  (high AET) were generated.

 °  The following data  sets were used to generate the AET in this table:

   1.   Battelle (1986)
   2.   Chan et  al.  (1985",  unpublished)
   3.   Comiskey et al.  (1984)
   4.   Osborn et  al.  (1985)
   5.   Romberg  et al. (1984)
   6.   Tetra Tech (1985a)
   7.   Tetra Tech (1986d)
   8.   Trial and  Michaud (1985)
   9.   U.S.  Department  of the Navy  (1985).

 c  Based on  160  stations.

 d  Based on  56 stations  (all ,from Commencement  Bay  Remedial Investigation).

 e  Based on  104  stations.

 f  Based on  50 stations  (all from Commencement  Bay  Remedial Investigation).

 9  A  higher AET (24,000 ug/kg for low  molecular weight  PAH and  13,000 ug/kg for anthracene) could  be
 established based  on data  from  an  Eagle Harbor  station.   However,  the  low molecular  weight PAH
 composition at  this station is considered atypical of Puget Sound sediments because of the  unusually
 high  relative  proportion  of anthracene.   Thus, the low molecular weight PAH and anthracene  AET shown
 are  based on the  next highest station  in the data  set.

   The value shown exceeds  the Puget Sound AET established in Tetra Tech (1986c) and results from the
 addition  of Eagle Harbor Preliminary Investigation data (Tetra Tech 1986d).
                                               30

-------
were examined  to  evaluate  small-scale  response gradients.   AET were used to
predict  the occurrence  of. biological  problems at  stations  where chemistry
data were available but  biological data were not.

Source Evaluation

     The objective of source evaluation is to  identify sources of contamina-
tion,  and  in  turn  to guide  remedial  activities.  A  limited evaluation of
sources  is  presented  in this report based  upon the spatial distribution of
contamination,  the  geochemical   properties  of  observed  contaminants,  and
characteristics  of  known or potential  sources.   A more complete evaluation
of sources will be presented in  a separate report  (Tetra Tech  1988b).

OVERVIEW OF  FIELD STUDY  DESIGN

     The general  design  of the field study is described in this section.  A
summary  of  data types and  samples  collected  in the Everett -Harbor study is
shown  in Tables 6 and 7.   Port  Susan  was  used as a reference area.   All of
the  Everett  Harbor  and  Port Susan data for this study were collected during
late August-October 1986.   A previous  sampling  of  Port Susan  occurred during
October  1985 as part of the  Elliott Bay Toxics Action Program.  Results of
the  1986 sampling were  compared  with  the  1985 results and used to evaluate
.Port Susan  as  a reference  area.   Similar methods were  used during both years
for  Port Susan variables discussed  in  later sections of  this  report.

Station  Locations

     The locations  of stations  sampled during  the  Everett  Harbor project are
presented  in Figures 5  and 6.    Subtidal  stations for sampling of sediments
were located  in  shallow  water   [<50  m water  depth]  near  shore,  with the
                                                            s
exception of stations located in deep water (>100 m)  near  the pulp  industry
wastewater  outfall  in eastern Port  Gardner-   Stations for sampling  English
sole (Parophrvs vetulus)  and  Dungeness crab  (Cancer maqister) were  located
near areas  sampled for  sediments at water depths generally <20 m.   Coordi-
nates  and water  depths [corrected  to mean  lower  low water  (MLLW)] of all
stations are listed  in  Appendix  A.
                                     31

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                             TABLE 6.   SUMMARY OF FIELD STUDY  DESIGN
   Indicator
Primary Variables
Sample Type
               No.  Stations

   No.       Everett
Replicates   Harbor   Reference"
Sediment chemistry
Toxicity bioassay
Benthic infauna
Bioaccumulation
Fish histopathology
toxic chemicals and
conventional variables"
% mortal i ty
major taxa abundances
species abundances
PCBs, pesticides,
mercury
lesion prevalences
composite 0-2 cmc
composite 0-2 cmc
0.1 -nc grab
0.1 -irr grab
Muscle—English sole
(>23 cm) and
Dungeness crab
English sole liver
1
5
5
5
5
1
ld
57
29
16
16
10
10
3
3
3
3
1
1

The reference area was Carr Inlet for sediment  chemistry  and  Port  Susan  for  the other indicators.

See Tables 1 and 7.

Chemistry and bioassay samples were aliquots  of the  same  composite sample.

60 fish.per sample.
                                           32

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TABLE 7   SUMMARY OF SEDIMENT ANALYSES BY STATION
Station
ES-01
ES-02
ES-03
EW-01
EW-02
EW-03
EW-04
EW-05
EW-06
EW-07
EW-08
EW-09
EW-10
EW-11
EW-12
EW-13
EW-14
EW-15
NG-01
NG-02
NG-03
NG-04
NG-05
NG-06
NG-07
NG-08
NG-09
NG-10
NG-11
NG-126
NG-136
NG-146
NG-156
OG-01
OG-02
OG-03
OG-04
OG-05
OG-06
OG-07
PS-02
PS-03
PS-04
SD-01
SD-02
SD-03
Semivolati le
Organic
Compounds3
X
X
X
X


X


X


X
X
X
X
X
X
X
X
X
X
X
X
X
X
X
X
X
X
X
X
X
X
X
X
X
X
X
X
X
X
X
X
X
X
Metal sb
X
X
X
X


X


X


X
X
X
X
X
X
X
X
X
X
X
X
X
X
X
X
X
X
X
X
X
X
X
X
X
X
X
X
X
X
X
X
X
X
Conventional sc.
X
X
X
X
X
X
X
X
X
X
X
X
X
X
X
X
X
X
X
X
X
X
- X
X
X
X
X
X
X
X
X
X
X
X
X
X
X
X
X
X
X
X
X
X
X
X
Resin Acids and
Volatile Chlorinated
Organic , Phenolic
Compounds" Compounds

X

X
X
X
X
X
X
X
X
X










X
X
f



_






X



X
X
X
X






X
X
X
X
X
X
X
X
X

X

X
X
X




4
,










X
X
X

X
X
X
X
X
X
X

Amphipod
Bioassay
X
X
X
X


X


X


X

X

X

X
X
X
X

X



X

X
X
X
X


X




X
X
X
X
X

Benthie
Infauna



X


X


X


X

X

X

X
X
X
X

X



X












X
X
X
X
X

                    33

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TABLE 7.  (Continued)

Station
SR-01
SR-02
SR-03
SR-04
SR-05
SR-06
SR-07
SR-08
SS-01
SS-02
SS-03
SS-04
SS-05
SS-06
Semi volati le
Organic
Compounds9
X
X
X
X
X
X
X
X
X
X
X
X
X
X

— — — — — — - — — ^^_^_____^__
Volatile
Organic
Metals" Conventional su Compounds"
X
X
X
X
X
X
X
X
X
X
X
X
X
X
X
X X
X
X
X
X
X
X
X
X
X X
X
X
X
Resin Acids and
Chlorinated
Phenolic
Compounds


X
X
X




X
X
X
X
X

Amphipod
Bioassay
X
X

X


X
X
X

X




Benthic
Infauna






X
X






a  EPA  priority pollutant acid/base/neutral  organic compounds,  PCBs, and pesticides (see Table 1 for complete
list of  target chemicals).

   EPA  priority pollutant metals, except beryllium and thallium.   Tributyltin was analyzed at  Stations SR-07 and
PS-02  only.

c  Total  organic carbon,  total nitrogen, water-soluble sulfides, and grain-size composition.

   EPA  priority pollutant volatile compounds.

e  Intertidal station.
                                                   34

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Site Vicinity Map
Weyerhaeuser Company, Everett, WA
                       0        1/2
                       e
                       Scale in Miles
                                                 J-2395-02
4/89

-------
  STATIONS SAMPLED IN
 PORT SUSAN DURING THE
EVERETT HARBOR SURVEY
                               Figure 5.  Locations of sampling stations for sediment chemistry,
                                         amphipod bioassay, and benthic macroinvertebrates.
                                 35

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Figure 6.  Locations of trawl transects in Everett Harbor and
          Port Susan.
  36

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     The  rationale  for station  locations  is provided  in the  sampling and
analysis plan for the Everett Harbor Toxics Action Program  (Tetra Tech 1986h)
and sections below.  Briefly, stations were selected to:

     •    Fill data gaps from previous studies

     •    Define known areas of contamination more precisely

     •    Determine  large-scale  gradients  of contamination  and bioef-
          fects in relation to known sources

     •    Detect  localized  areas of contamination  and  bioeffects  near
          potential sources.

Note that  the triad of  sediment chemistry,  amphipod bioassay,  and  benthic
infauna was  sampled  at  selected  sediment stations  in all  study areas except
Ebey  Slough, Steamboat  Slough,   upstream  portions  of  the  lower  Snohomish
River, and -the deepwater  outfall  site  in offshore  Port  Gardner.  Assessment
of effects  on benthic  infauna in these areas would have  required  extensive
sampling  of  additional  reference  conditions  to match,  their characteristic
salinities or water  depths.  Such  sampling was  considered beyond  the scope
of this  project.   Moreover,  stations  in  the Snohomish River,  Ebey  Slough,
and Steamboat Slough were  not  sampled  for  benthos  because of the likelihood
of  estuarine  gradients   in  community  composition  that  would   confound
interpretation of the data  (Tetra Tech 1986h).  Additional cost savings were
realized  by  collecting  data  on  amphipod  bioassay  mortality  and  benthic
infauna only at selected stations sampled for analysis of sediment chemistry.
Stations  selected  for   analysis of  the  full   triad  of  sediment  quality
indicators were typically located near known sources of contaminants.

     In nearshore areas of Everett Harbor and  in  the Snohomish River,  station
locations were  determined  by  line-of-sight  fixes  on  stationary  shoreline
features.   In offshore areas  of Everett  Harbor and  in Port Susan,  LORAN C
navigational coordinates were recorded for each station.  Wherever possible,
a variable  range  marker was  used  with LORAN C  to  determine ranges  between
                                     37

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two  reference  points,  or  to  determine  distances  to shore  objects.    In
addition,  photographic  records of  all  position alignments  and  ranges were
made at all stations, and depth soundings  were  recorded.  Station positioning
methods were  sufficiently accurate  to  define locations within a 15-m  radius
at most  stations and within  a 8-m radius at  stations  that  were located  in
areas where the vessel could be tied to a stationary object.  The vessel was
anchored  at  the stations whenever  possible  during the  survey,  and station
locations were always verified before each sample was collected.

Data Analysis Methods

Chemical  Contamination—

     The  magnitude  and spatial extent of  sediment  contamination was  deter-
mined  by comparisons of chemical concentrations among  Everett Harbor study
areas  and with  reference  conditions in  Carr  Inlet  and Port Susan.  Averaged
data from six Carr Inlet stations sampled  in  1984 were used whenever possible
to calculate  EAR for Everett  Harbor sediments.  Recent Carr Inlet data were
used as  the basis for calculating EAR for the following reasons:

     •    The most  complete  reference  data  set is  available  for Carr
           Inlet,  including  synoptic data  for  metals,  a wide  range of
           organic  compounds,   grain size,  organic  carbon,  and  other
           conventional variables

     •    The lowest detection  limits for most substances of concern in
           Puget  Sound embayments are available for Carr Inlet

     •    Elevations  above  reference for  other urban embayments (e.g.,
           Commencement  Bay,  Elliott Bay)  have been   calculated  with
           these  data,  and therefore, will be  directly comparable with
           the values calculated for this study
                                     38

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     •    In almost all cases where chemicals were detected in multiple
          reference  areas,  the  Carr  Inlet  samples  had  comparable or
          lower values and on this basis appear to be reasonably repre-
          sentative of Puget Sound reference conditions.

For chemicals  not  measured in Carr Inlet  (Tetra  Tech  1985a),  such as resin
acids, most  tentatively  identified  organic (TIO)  compounds, and chlorinated
guaiacols,  data  from  Port Susan were  used.   Not  all  TIO  compounds were
detected  in  Port Susan.   Because detection limits are typically unavailable
for TIO  compounds,  reference concentration of 20 ug/kg  dry weight (DW)  was
assigned  as  a reasonable  detection limit  (twice the detection  limits  for
many  semivolatile  organic  compounds in Port Susan)  to  generate EAR for TIO
compounds.   EAR  values for TIO  compounds  were  used  for comparison purposes
during data  analysis,  but were  not used  during  problem area identification
and ranking.

     Because  replicate data  for sediment  chemistry were  not  collected  at
every  station,  tests  for  statistically  significant  differences  between
Everett  Harbor samples and reference  area samples  could  not  be conducted.
Instead,  chemical  data  from a  wide  range  of  Puget Sound  reference  areas
(collected from 1976 to 1986, including the Port Susan data from the present
study)  were used  for determining  whether elevations  above  reference were
"significant"  (i.e.,   whether the  contamination  exceeded  all   Puget  Sound
reference  conditions).    Port  Susan  data from  this  study  were  added  to
reference data compiled previously (Tetra Tech  1985a).   If  a chemical was not
detected  in  a reference area  sample,  detection  limits were  used  to define
reference  conditions  for  that  chemical.   Detection  limits  greater than
50 ug/kg  DW for  organic  compounds were  excluded from  the  reference area
concentration  ranges  to  minimize  the  bias resulting  from  less  sensitive
chemical  analyses.   Such  detection limits  observed in other  studies were
previously excluded from Puget Sound reference area  data (Tetra Tech 1985a).

     In  general,  high detection  limits  were reported  infrequently  in this
study and did  not  impede  data analysis.   However, the maximum chemical con-
centrations  for  certain compounds  (e.g.,  certain chlorinated  benzenes  and
pesticides)  were relatively  low and were  in some cases  exceeded by maximum
                                     39

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detection limits.    In  order to generate 50th percentile (median) and 90th-
percentile concentrations  that were most  representative  of chemical condi-
tions  in  the  study  area,  detection  limits greater  than  100 ug/kg  DW for
semivolatile  organic compounds or  greater  than  25  ug/kg  DW   for single
component pesticides  were  not used in determining percentile concentrations
in the study area.

     In  samples  analyzed  for  chlorinated  phenols/guaiacols   as  well   as
acid/base/neutral  (A/B/N)  compounds, data  were generated  by two different
procedures   for   certain   chlorinated   phenols   (i.e.,    2-chlorophenol,
2,4-dichlorophenol, 2,4,5- and 2,4,6-trichlorophenol,  and pentachlorophenol).
Because detection  limits  for the dedicated chlorinated phenol analyses were
in most  cases  considerably lower than for  the  full-scan A/B/N analyses (in
extreme cases,  by  well  over  two orders  of magnitude), only the  results for
the  dedicated  analyses were used in data analysis.

     For a small proportion of  the chlorinated phenol  data, detected  results
for  the  dedicated  analyses were greater than or roughly equal  to (within  a
relative difference  of  50 percent) detection limits  reported for the full-
scan analyses.   In these  cases, inclusion  of the full-scan detection limits
would  have  had  virtually  no  effect  on  reported  data.   In  three cases,
concentrations  reported for  dedicated  analyses  were notably  greater than
full-scan  detection   limits  (i.e.,  with  a  relative  difference  of »50 per-
cent):   2,4-dichlorophenol at  Station  EW-01 [320 ug/kg  DW (dedicated) vs.
U20  ug/kg DW  (full-scan)]; 2,4,6-trichlorophenol at Station EW-01  [290 ug/kg
DW  (dedicated)  vs.   U100  ug/kg DW  (full-scan)];  and  pentachlorophenol   at
Station EW-04  [460 ug/kg DW  (dedicated) vs.  U200 ug/kg DW (full-scan)].  The
full-scan  detection   limits in  these  cases may  be  underestimates [e.g.,   by
not  fully  accounting for  analytical  recoveries  (6-10  percent, recovery for
the  three  cases  cited above) or for  extraction  efficiency  (the  acetic acid
used  in  dedicated  analyses may have enhanced extraction efficiency  relative
to  the  full-scan  analyses)].    Regardless,  favorable quality   assurance/
quality  control   (QA/QC)   results  for  the  dedicated  analyses  (Tetra  Tech
1988a) and  strong  correlations among chlorinated phenol concentrations (see
Sediment  Chemistry  in  Results  section)  support the  use  of  the dedicated
results  over  the  full-scan  results  for  these compounds.     Preferably,
                                     40

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additional sampling  will  be conducted  in  the East Waterway  to resolve the
few  discrepancies  between,  reported  values  for  dedicated  analyses  and
detection limits for full-scan analyses.

     Pairwise Pearson correlations were performed (using detected data only)
to  examine  covariance   in   the  distribution  of  selected  contaminants.
Scatterplots of  all  correlations cited  in  text were  examined.   Based upon
relatively strong correlations (e.g.,  r>0.8)  among most individual polycyclic
aromatic  hydrocarbons  (PAH),  PAH were  treated as  two  compound  groups [low
molecular weight PAH (LPAH) and high molecular weight PAH  (HPAH)] during data
analysis.  Detection limits were included in these PAH sums.

Biological Effects--

     Selected biological  variables (i.e.,  amphipod bioassay, benthic infauna,
and  liver histopathology)  were  used  to test for statistical  differences
between  study  area  stations  and the reference  area  (Port Susan).   Use  of
statistical  criteria  ensured  that   between-site  differences  were  judged
objectively-  The statistical  design used to  test for significant differences
between  control  and test  stations  adjusted  the  individual error  rate  for
multiple comparisons.  This reduced the probability of a Type I error (i.e.,
that the  null  hypothesis  being tested was not falsely rejected).   The null
hypothesis was  that the mean  value  of a variable  at the  test  station  was
equal  to  the mean  value  of that variable at the  reference  station.   This
null hypothesis  was  tested vs.  several  alternative  hypotheses,  depending on
the biological variable being  tested.   In  environmental studies,  control  of
the Type  I  error rate becomes  increasingly  important  as  the regulatory and
legal  consequences  of  incorrectly  identifying a  difference  between  mean
values become important.

     Correction  of the error rate for  multiple comparisons  was  necessary
because the repetitive use of data collected at a control  station results in
non-independence  among the  pairwise  comparisons  (Winer  1971).     If  the
individual  error  rate  for  each  comparison  is  not   corrected,  then  the
probability of falsely identifying a significant difference between the test
and  reference  stations increases with  the  number of pairwise comparisons
                                     41

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made.    For  example,  if  the  selected  pairwise  significance  level  is
alpha=0.05,  and  20  hypotheses  are  tested  (each  using  the  same  reference
data), then  the  probability  that  all  of the significant differences identi-
fied  in  the  20 comparisons are correct  is  (0.95)20,  or 35.8 percent.  This
probability decreases as the number of tests increases.

      In  these  studies,  the  number of pairwise comparisons varied from  11 to
29  among the four biological variables.  Selecting an experimentwise  error
rate  of  alpha=0.05, and dividing that rate by  the number  of comparisons  would
have  yielded  individual  error  rates between  alpha=0.005  to  alpha=0.002.
However, a pairwise comparison error rate of alpha=0.001  was  selected  for all
four  variables,  for   three  reasons.    First,  a  significance   level  of
alpha=0.001  was  sufficiently  conservative to   assure  with  97.1  to  98.9
percent  probability that all  identified significant  differences  were true
differences.   Second,  use  of  the same  error  rate  for tests  of  all  four
biological  variables  ensured comparability  among the  test  results.  Third,
an  error rate of  alpha=0.001 was  consistent  with the  pairwise comparison
error rate used  in  the  Elliott'Bay and Commencement. Bay studies.

      For benthic macroinvertebrate data, an  unpaired  two-sample t-test was
used  to test  for  a statistically significant  difference (P<0.001) between
each  study  site  (n=5)  and  the  pooled reference  site (n=15  for  the  three
stations combined).  Before applying  the parametric tests, the Fmax test was
used  to determine  whether the  sample variances  were homogenous  for each
paired  comparison.   Because  the variances were  heterogeneous in most of the
pairwise comparisons,   the  abundances of infaunal  taxa  (i.e.,  polychaetes,
crustaceans,  pelecypods,  and  gastropods)  used  to  test  for  between-site
differences  were log-transformed  [log^o  (x+1)].   If  the variances  of the
log-transformed  data  remained heterogeneous between the  study site and the
reference  site (Fmax test; P<0.05), an approximate t-test was applied to the
data  (Sokal  and  Rohlf 1981).

      Comparisons of benthic  infaunal  assemblages  between stations in Everett
Harbor  and Port  Susan,  and other  reference  areas  within Puget Sound are also
described.   Based  on  species-level data for all stations within the Everett
Harbor  study area,  faunal  similarities among  stations were determined  using
                                     42

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a normal  classification  analysis.    All  data  were  log  transformed  [Iog10
(x+1)] prior  to  analysis.  The classification  analysis  involved two  steps.
First, similarity  values  were generated for all  possible pairs of  stations
included in the  analysis  using  the  Bray-Curtis  Similarity Index (see  Boesch
1977).  This  index uses both species  composition  and  the abundances of the
individual  species  to estimate between-site similarity.   The group average
clustering strategy was  then  applied to the matrix  of similarity values to
generate a  dendrogram  of stations,  from  which  groups  of  stations  (i.e.,
stations that  are most similar  in  species composition  and  abundance) were
determined.

     For the  amphipod  (Rhepoxvnius abronius)   bioassay  data,  a two-sample
analysis of variance  (ANOVA),  which is statistically equivalent to a t-test,
was used to  test for a significant  difference  (P<0.001)  between each study
site station  (n=5)  and  the  pooled  reference stations (n=10 for two  stations
combined).    Station  PS-02  was  excluded  from  the  reference area  data  set
because of excessive  mortality  (see Sediment Bioassays in Results section).
Following the  approach of Mearns  et  al.   (1986), the  data were transformed
using an arcsine transformation  only  when  the  variances  were heterogeneous.
Homogeneity of variances  was  tested using  the  Fmax  test  (P<0.05).    The mean
mortality and  95 percent confidence limits for  reference area  samples from
Port  Susan were  compared with similar  statistics for  other  reference areas
used during previous  studies.

     There is  evidence that the R. abronius bioassay  is subject to limited
grain-size effects and attempts have been made to quantify  and compensate for
these effects  (DeWitt et al.  1988).   The  present data  were examined using
simple  linear regression to  test  for a  predictive  relationship  between
amphipod mortality and grain-size (percent fine-grained material).

     Lesion prevalence and male proportion  (i.e., an  index of  fish sex ratio)
were  compared  between each transect in Everett Harbor  and  the Port Susan
transect using the G-test of independence (P<0.001) with Williams' correction
factor (Sokal  and Rohlf  1981).   Before testing for a difference  in  lesion
prevalence,  the   age   distribution  of  fish  sampled for  histopathological
analyses was  compared between each transect in  Everett  Harbor  and  the Port
                                     43

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Susan transect  using the Mann-Whitney  U-test.   When the  age distributions
were significantly different  (P<0.05). adjustments were made to the data set
for  the  Everett Harbor  trawl site by  removing  data for  individuals  of an
extreme age class until the age distributions were no longer different.  The
similarity among the prevalences  of all three  lesions  across all transects
was  determined  using Kendall's  coefficient  concordance  (W).   Within Everett
Harbor,  the  proportion  of males  having each  kind  of hepatic  lesion was
compared with  the  corresponding proportion  of  females  using  the G-test of
independence with Williams' correction factor.  Positive association between
the  prevalence  of  each kind  of lesion  and  fish  age was tested using Spear-
man's  coefficient  of rank correlation  (rs).   Length-at-age  was compared
between fish with and without hepatic lesions using the Mann-Whitney U-test.

     Otoliths  were  available for  age  determination  for 650  of the 660
(98  percent) English  sole sampled in Everett Harbor and Port Susan.  Ages of
the  10 fish not having corresponding otoliths were estimated from  age-length
keys based  on  the 650  fish of  known age,  stratified by  sex (Ricker 1975).
Once age  determinations were made,  fish younger than  3 yr  old (n=66)  were
excluded from  subsequent  analyses.   The goal of  this study  was to focus on
individuals >3  yr  old (i.e.,  those  most likely  to be afflicted with serious
idiopathic hepatic lesions).

     For   bioaccumulation,    qualitative   comparisons  of  polychlorinated
biphenyl  (PCB)  and  mercury concentrations  in tissues  of English sole and
Dungeness crabs were made among stations.    Pesticides  data  were  not tested
statistically  because pesticides  were  not  detected  in any  tissue samples.
No  statistical  tests were performed  to  determine among-station differences
in  contamination  of  Dungeness  crab  because  replicate  samples were not
collected at stations other than Station EW-91.   Limitations of PCB data due
to   low  analytical   recoveries    (see   below,    Bioaccumulation,  Quality
Assurance/Quality  Control  Results)   precluded  statistical  treatment  of PCB
data for English sole.  Statistical  tests were not performed on mercury data
for  English  sole  because reference-area concentrations were  highest  in the
study.
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SEDIMENT CHEMISTRY

Field Sampling

     Full details of the  sampling  design  and  techniques are provided in the
"Sampling  and Analysis  Design  for  Development  of  Everett Harbor Action
Program" (Tetra Tech 1986h)  and the "Quality Assurance Project Plan for Field
Investigations to  Support  Development  of the  Everett  Harbor  Action  Plan"
(Tetra Tech 1986f).   Field collection  procedures followed the recommendations
of the Puget Sound Estuary Program  (PSEP)  (Tetra Tech 1986g).

     Sediment samples  were  collected  between  2 and 29  October  1986 using a
chain-rigged  van  Veen  grab sampler with  a cross-sectional area  of 0.1 nr-
Following deployment, the closed grab was retrieved and placed in a sampling
tray.   The hinged lids of  the van Veen sampler were opened  to inspect the
sample.

     Care was taken  to ensure  recovery  of an  intact surface sediment layer,
with four major criteria used  for rejection of a sample:

     •    Overflowing  sediments, with sediment  touching the top of the
          closed cover

     •    Water leaking from the sides or bottom (i.e.,  indicating that
          the interstitial  water in  the  sample was  being  flushed with
          overlying seawater), or visible scour of the sediment surface
          near the edges of the sampler

     •    Turbid water overlying the  sediments

     •    Insufficient penetration  depth.

     After  the  field  supervisor determined  maximum  penetration  depth  and
sample  acceptability,  qualitative  observations were recorded  on  field log
sheets for  sediment  color,  odor, texture, and  the  presence of recognizable
                                     45

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organisms.  An HNu photoionization detector was used to monitor all sediment
samples for harmful vapors.

     When  it  was  determined that  the  grab triggered  incorrectly,  that the
sample was disturbed, or  that  some of  the sample was lost, a new sample was
taken.   More  than one  grab  at the same  station  sometimes  was  necessary to
obtain  an acceptable depth  of penetration.   In medium  to coarse  sand,  a
minimum penetration  depth  of 5 cm was considered acceptable'.   In fine sand
and  sandy silt,  a penetration depth  of  7  cm  was  the  minimum acceptable
depth.  When  attempts to  sample a station were unsuccessful, another nearby
station was  selected and  documented.   Standardized collection  data (i.e.,
collection  date and  time,  station  location,  depth, and  replicate number)
were recorded for each sample.

     Once onboard, samples were held in a  vertical position  by blocks and the
overlying  water was  carefully drained  off by  an  aspirator.  Subsamples for
volatile  organic  analyses were taken  by  placing 1.5-oz  glass  jars (dupli-
cates)  at the undisturbed sediment surface and  filling them using a stain-
less-steel  spatula.   These  s.ample  jars  were tightly  sealed  using Teflon
tape,  with  no headspace remaining.  Jars  for  volatile analysis were filled
as  tightly as  possible,  eliminating obvious  air pockets.    Subsamples for
sulfide analysis  were  immediately removed from the  sampler and  placed in a
tared  plastic container with 50 ml of sulfur antioxidant buffer.

     The  remaining  subsamples  were taken  from a homogenized sample.   Each
sampling  horizon  from the upper 2 cm of  sediment away  from the edge of the
van Veen sampler was carefully removed  with a stainless steel spatula, trans-
ferred  to  a  stainless  steel  bowl   (which  was pre-rinsed with site water and
methylene  chloride),  and  homogenized  by stirring  with  a  stainless  steel
spoon.   Samples were stirred  until  uniform color and  textural  homogeneity
were observed.  Subsamples for metals and semivolatile organic analyses were
removed with a stainless steel  spoon and placed in precleaned glass jars with
polytetrafluoroethylene  (PTFE)-lined  lids.    Subsamples  for  grain  size
analysis were placed in  polyethylene bags.
                                     46

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     Intertidal  samples  were collected  from  shore using  a  stainless steel
spatula.  Otherwise, intertidal and subtidal sediment samples were processed
and analyzed in similar fashion.

     Sample  handling  (including  chain-of-custody procedures)  and  sample
storage are addressed in  detailed quality assurance reports prepared for this
project (Tetra Tech 1988a).

Laboratory Analysis for Metals

     The following  11  of  the 13 EPA priority  pollutant metals were analyzed
in 54 sediment samples:  antimony, arsenic, cadmium, chromium, copper, lead,
mercury, nickel,  selenium,  silver,  and zinc.   The remaining  two priority
pollutant metals, beryllium  and thallium, were not analyzed because histori-
cal  data  did  not  suggest that  these  metals  were  of  concern  in  the study
area.   Iron  and manganese  were also  analyzed  in 54  samples and  TBT  was
analyzed in  two  samples.    Analyses  were  performed  at  Battelle  Northwest
Marine Research Laboratory in Sequim, Washington.

     Samples were prepared by thawing the frozen sediment, and then homogen-
izing, freeze-drying,  and  grinding  each  sample.   The  sample was then either
subjected  to  a  total  acid  digestion  for atomic  absorption  analysis,  or
pressed  into a  pellet  for  x-ray  fluorescence  (XRF)  analysis.   Total  acid
digestion was  performed by combining 1 mL of 4:1 nitric acid:perchloric acid
(HN03:HC104) with a 0.200-g  sample  in  a PTFE  bomb at  130° C for 4 h.  After
the sample was cooled, 3  ml  of hydrofluoric acid was  added and the bomb was
heated overnight at 130°  C.   After cooling, 20 mL of 2.5 percent boric acid
^3603) was  added  and  the bomb was  heated  again at 130° C  for 8  h.  After
the  weight  and  volume  of the  digestate were determined, the  solution  was
analyzed for  silver,  cadmium,   antimony,   and  selenium  by  Zeeman graphite
furnace atomic absorption  (GFAA)  using the method  of  standard addition  for
calibration.  Cadmium and silver were first  concentrated into aminopyrolidine
dinitrocarbonate (APDC).   Mercury was  determined  on aliquots  by cold vapor
atomic  absorption  following  preconcentration  into  APDC.    The  mercury
detector was calibrated with standard solutions.
                                     47

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     XRF was  used to quantify  arsenic,  chromium, copper,  iron,  manganese,
nickel,  lead,  and zinc.   Thin  film  standards  (Neilson 1977) were  used to
calibrate the  XRF analyzer.   Although  the analysis of these  metals by XRF
differs  from  routine EPA  methods,  the  PSEP protocols  (Tetra Tech 1986g)
specify that XRF  may be used if  accuracy  and precision can be demonstrated
to the levels specified by the program.

     TBT was analyzed by GFAA following extraction of organotin species  into
methylene chloride, and  back  extraction of  TBT into sodium hydroxide  solution
(Homer and Dooley 1983).

Laboratory Analysis for Semi volatile Organic Compounds

     The methods  used for analysis of A/B/N semivolatile  organic compounds
followed Tetra  Tech  (1986a).  Analyses were performed  at  Enseco/California
Analytical Laboratories (CAL) in West Sacramento, California.

     An 80-g homogenized sediment sample was spiked with the stable  isotope-
labeled analogs of the  target compounds  (8 ug of base and neutral compounds
and 12 ug of  acid compounds).   The sediment was then Soxhlet-extracted with
methylene  chloride/methanol   (2:1,   vol/vol).    The  resulting extract  was
subjected to liquid-liquid partitioning with water  and  was  dried  by elution
through a sodium  sulfate column.   Elemental  sulfur,  a common  interferant in
estuarine and  marine sediments,  was removed from the extract with metallic
mercury.   Biological macromolecules were  then  removed  from  the  extract by
gel permeation  chromatography.   The extract was  subjected  to reverse phase
column chromatography (bonded C^g solid  phase)  to reduce interferences  from
unresolved paraffinic hydrocarbons prior  to capillary gas chromatography/mass
spectrometry (GC/MS)  analysis for A/B/N compounds using the isotope  dilution
technique.   Compounds  without   labeled  analogs  (Table 8)  were  quantified
using  the  nearest eluting,  most  chemically similar  labeled  compound  as a
recovery standard.   All reported  concentrations were corrected for  recovery
using  the  isotope  dilution  technique.    Recoveries  of  isotope-labeled
standards were determined by the  internal standard technique.
                                     48

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TABLE 8.  LABELED COMPOUNDS USED
   WHEN ANALOG  NOT  AVAILABLE
d7-2-methylpyricline
    aniline

dg-naphthalene
    benzyl alcohol
    2-methylphenol
    4-methylphenol
    N-nitrosodi-n-propylamine
    b i s(2-ch1oroethoxy)methane
    benzoic acid
    4-chloroaniline
    2-methylnaphthalene

dig-acenaphthene
    2-nitroaniline
    3-nitroaniline
    4-nitroaniline
    dibenzofuran

d^Q-phenanthrene
    4-bromophenyl phenyl  ether

d^-benz (a) anthracene
    butyl  benzyl phthalate

di2-benzo(g,h,i)perylene
    i ndeno(1,2,3-cd)pyrene
    dibenzo(a,h)anthracene
               49

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     The first batch of samples-  extracted  by  the  laboratory yielded consis-
tently  lower,  but  acceptable  recoveries  of  the  isotope-labeled  compounds
than  the  subsequent batches.   The  laboratory  was unable  to  determine the
cause for this systematic phenomenon.

     Lower limits of detection (LLD) were determined according to guidelines
specified in  Tetra  Tech  (1986a).  Based on the complexity of the extracts,
three levels of LLD were established.  The  data  quality objective of 10 ug/kg
DW was met for the "cleaner" samples.

Tentatively Identified Organic Compounds--

     TIO  compounds  were  searched  for  in   all  extracts  of  Everett  Harbor
sediments analyzed for A/B/N compounds by GC/MS.  Analyses were performed at
Tetra Tech on a stand-alone Finnigan GC/MS  data  system with  data stored on 9-
track magnetic tapes generated at  CAL.   The following  procedure was used to
acquire data for TIO compounds:

     •    .Preliminary,  intensive  searches  were  conducted  on roughly 25
          percent of the  samples.   Most samples  were chosen  from the
          most  contaminated  areas  (e.g.,  the  East  Waterway),  but
          representatives  of  all study  areas  were examined.   Fifteen
          chemicals that  occurred most  frequently and at  the highest
          concentrations  were selected  for  routine   searches in  all
          samples.

     •    Routine  searches  for   the 15  selected  TIO  compounds  were
          performed in all samples and in two  method blanks.

     •    Concentrations  were  estimated based  on  d1Q-phenanthrene  (a
          standard spiked  in  the sample at a  known concentration) and
          response factors  that  accounted  for  the variations  in  frag-
          mentation between d,Q-phenanthrene  and  the TIO  compounds.
          TIO  compound concentrations  were  recovery-corrected  based
          upon d.Q-phenanthrene.    It is  unlikely  that  djQ-phenanthrene
          recovery was  applicable across  the chemically diverse range of
                                    50

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          TIO compounds.   For compounds similar to phenanthrene  (e.g.,
          retene),  recoveries  were  likely similar to d,Q-phenanthrene.
          For more  polar  compounds  such  as fatty  acids,  the recovery
          correction  was  likely  an  underestimate.    Thus,  recovery
          corrections were "conservative" overall.  All detected  values
          were qualified as estimates and assigned an "E" qualifier.

     •    Undetected  TIO  compounds  were  reported  as   U   (without  a
          detection limit).  Sufficient information was not available to
          determine detection  limits.

     •    Several compounds  were found at  low levels in blanks.   Any
          compound  found  in  a sample  at  a level  less than  five times
          the highest concentration  found in  any blank was  reported as
          a B (with no accompanying value).

Laboratory Analysis for PCBs

     The extraction and cleanup procedures were performed according to Tetra
Tech (1986a) with the following notable exceptions:

     •    40 g  of  sediment were extracted and  none  of  the  extract was
          split for A/B/N  analysis

     •    No  isotopically  labeled  A/B/N  compounds  were  added  [the
          isotope dilution technique  described in Tetra Tech  (1986a)
          applies only to  A/B/N compounds].

     Analyses of PCBs in  extracts were performed at CAL  by  two instrumental
methods:   gas  chromatography/electron  capture  detection  (GC/ECD)  and GC/MS
with limited mass  scanning.    Only  GC/ECD  analyses were originally planned
for  these  analyses.    However,  review  of  the  data generated  by  GC/ECD
indicated  that  sample   interferences  detracted  from  the  reliability  of
qualitative and  quantitative  results.   GC/ECD  results for  two  matrix spike
samples  and two  sediment  standard  reference materials  were  low  (10  to
55 percent  recovery  for  the matrix  spikes  and 9  to  32  percent  of accepted
                                     51

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values for  the reference  materials),  whereas recoveries for  spiked blanks
(without sample interferences) were  considerably  better (70 to 80 percent).
To address  the apparent problems with  interferences,  samples  with reported
values greater than 50  ug/kg  (DW)  or detection limits greater"than 50 ug/kg
(DW)  were re-analyzed by GC/MS with  limited  mass  scanning.   Two samples had
reported GC/ECD results of  less  than 50 ug/kg (Samples NG-08 and SD-03) and
thus did not require re-analysis  by GC/MS.  All other  positive  PCB results in
the database were generated by GC/MS.

GC/ECD Analysis--

     The  instrumental  and  quantification  methods  described  in  Tetra  Tech
(1986a)  were  followed  with  several  exceptions.    Most notably,  external
standard  quantification  was   used  rather  than  the  recommended  internal
standard  method,   peak  heights  were  used  rather  than peak  areas, and  a
single-point calibration was  used  rather than a  five-point calibration.   A
peak-by-peak,  modified  Webb-McCall  technique was  used  to quantify  PCBs.
Relative response factors for 25 resolved peaks in a PCB- standard containing
Aroclors  1242,  1254,  and-1260 (the  range  of congeners expected in environ-
mental samples) were  determined  by  measuring the  individual peak concentra-
tions by GC/MS and then using dilutions of the same standard for initial and
ongoing GC/ECD  calibrations.   Dual  capillary column analyses were performed
with a 30-m  DB-5  column  (for  quantification)  and  a  30-m DB-1701 column (for
confirmation)  (J & W Scientific).

GC/MS Analyses—

     GC/MS  analyses were  performed with a 30-m DB-5  fused  silica capillary
column (J & W Scientific); the GC oven was temperature-programmed from 50° C
(held  1 min)  to 320° C at  6°  C/min.   The  internal  standard was d1Q-phenan-
threne.  The following  ions were monitored for each chlorination level: m/z
222,   224  (dichloro-);  m/z  256,  258  (trichloro-);  m/z 292,   290,  294,  222
(tetrachloro-); m/z 326,  328,  256  (pentachloro-); m/z  360,  362,  292 (hexa-
chloro-);  m/z  394,  396,   398,  326  (heptachloro-);  and m/z  430,  428,  360
(octachloro-).   Thus,  for more  chlorinated  congener groups that  might co-
                                     52

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elute with less chlorinated congeners, (M-70)+ ions were used to ensure that
peaks were not double-counted or misclassified.

     The  congener  standard  containing   representative  compounds  differed
slightly  from  the  recommendations   of  Tetra  Tech  (1986a)  and   U.S.  EPA
Method 680:  2,4-dichlorobiphenyl was used rather than 2,3-dichlorobiphenyl;
2,4,6-trichlorobiphenyl   was   used   rather   than   2,4,5-trichlorobiphenyl;
2,2' ,3,4',5,6'-hexachlorobiphenyl  was   used   rather  than  2,2',4,4',5,6'-
hexachlorobiphenyl; 2,2',3,4,5,6,6'-heptachlorobiphenyl was used rather than
2,2'" ,3,4' ,5,6,6'-heptachlorobiphenyl;  and   2,2' ,3,3' ,5,5' ,6,6'-octachloro-
biphenyl was  used  rather  than  2,2',3,3',4,5'.S.S'-octachlorobiphenyl.   A
different congener standard was used  to establish retention time windows for
scanning with selected  ions.

     Only single-point  calibrations were used for GC/MS and GC/ECD standards
(although  five-point  calibrations  were specified to the laboratory);  hence,
the results must be considered estimates only.

Laboratory-AnaIvsis for Chlorinated Pesticides

     The method originally  specified is described  in Tetra Tech  (1986a).
This  procedure calls  for  extraction of  a  100-g  wet  weight   sample  with
removal  of 20  percent of the extract for GC/ECD analysis  of pesticides and
PCBs.  For this project,  the pesticide/PCB fraction was extracted separately
from  the A/B/N extract to be  analyzed  by  GC/MS.   A sample  of 40  g  (wet
weight) was extracted and processed according to protocol.

     The original  statement of  work  submitted to CAL was  verbally  modified
at the  request  of  CAL after they received the samples.  Instrumentation was
modified from  capillary column  analysis  to packed  column  analysis  for both
quantisation and  confirmation  according  to EPA  Contract  Laboratory Program
(CLP) procedures.   A mixed phase  1.50 percent  SP-2250 and 1.95 percent SP-
2401  was used for the quantisation column.  The confirmation column used was
3 percent SP-2100.
                                     53

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     Most  of  the sample extracts were diluted to minimize  interference  from
non-target compounds.   Dilution factors  were  10,   100,  or 200.   Detection
limit specifications  (0.1-5.0 ug/kg) were satisfied for samples not requiring
dilution but  were  exceeded  for  diluted  samples.

Laboratory Analysis  for Resin Acids  and  Chlorinated  Phenols/Guaiacols

     Standard procedures for analysis of resin acids and chlorinated phenols/
guaiacols  in  sediments  are not available.  Thus,  dedicated analyses for these
compound  classes were  developed  in  conjunction  with Laucks  Testing  Labora-
tories  (Seattle,  Washington)  and were  validated with  initial  performance
tests.

Extraction--

     Wet   sediment  samples   (roughly  40-50  g  wet weight)  were  added to  a
precleaned Soxhlet thimble.   Recovery surrogates  were  spiked  into the sample
prior  to  extraction:   0-methylpodocarpic  acid  (a resin  acid  surrogate)
•[National  Council  of  the  .Paper  Industry for  Air  and  Stream  Improvement
 (NCASI)  1986]  was  added  at  50 ug/sample  and  two  phenolic  surrogates,
2,6-dibromophenol  and 2-bromo-4-chlorophenol, were added at 5 ug/sample.   The
sediment was  rinsed with a solution of 0.5-mL acetic  acid/50 ml_ methanol  to
remove  as  much  water as possible and to  reduce  the extraction  pH  and  thus
enhance  recoveries of  the  organic  acid  analytes.  The acetic  acid/methanol
rinsate  was  stored  for later  use.   The  rinsed sediment  was  then  Soxhlet
extracted  for 24  h  with a mixture  of  3:2  (v/v) acetone/hexane (azeotropic
boiling  point =  50°  C).

      Sample extracts were combined with the methanol rinsates  and 200 mL of
pre-cleaned  water  (pH <2)  in  a separatory funnel  and  were  subjected  to
 liquid-liquid extraction.    After removal  of the hexane  layer,  pentane  and
ethyl  ether  were used for  additional  extractions  of  the  aqueous  phase.
Separatory funnel  extracts were combined, dried with N32S04, and concentrated
to a volume  of  10 ml  with  a  Kuderna-Danish (K-D)  apparatus.   The extracts
were then  split into two 5-mL  aliquots for separate resin acid and  chlori-
nated  phenols analyses.
                                     54

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Derivatization--

     Resin  acids  were methylated  and  chlorinated  phenolics were acetylated
before GC/MS analysis.

     Resin  Acids--Extract  aliquots to be analyzed  for  resin  acids were ex-
changed into ethyl  ether,  treated with 4 drops of methanol, and derivatized
with diazomethane  (CH2N2)  to generate methyl  esters.   Derivatized extracts
were exchanged to  1  ml of  hexane for GC/MS analysis.  Validation tests with
a  spiked  extract demonstrated  that  4 min of  methylation  were required for
efficient  methylation.   When recovery of  the  surrogate compound (0-methyl-
podocarpic  acid)  suggested  the possibility of  inefficient derivatization,
extracts were rederivatized.  Samples were re-extracted when rederivatization
had no apparent effect.

     Chlorinated  Phenols--Extract aliquots  to be  analyzed  for chlorinated
phenols were derivatized to generate acetate  derivatives, which  were far more
amenabl-e to GC analysis than,the  underivatized compounds.  The  5-mL extracts
were reduced  in  volume  (0.5  ml)  and treated with  sodium  acetate  (1  g) and
acetic anhydride  (3 ml)  in a 15-mL  culture  tube.   After  1 h  of heating at
60°  C,  the  derivatized  extracts  were  cooled  and  water  (3 ml)  and  hexane
(3 mL)  were added.    The  hexane  layer  was  removed  and  the water was re-
extracted  twice  with  3  ml of  hexane.   The hexane  extracts  were combined,
dried with  Na2SC>4, and concentrated  to 1 ml for GC/MS analysis.

     The  efficiency of derivatization  was monitored on  a sample-by-sample
basis by including routine searches  for the underivatized surrogate recovery
compounds  during GC/MS analysis.   Underivatized  surrogates were detected in
three samples, but the areas of the  underivatized compounds were always less
than 5 percent  of the areas of the  derivatized  compounds.  Thus, rederiva-
tization was considered unnecessary  for these samples.

Instrumental Analysis—

     Resin  acids were  analyzed  by full-scan  GC/MS and chlorinated phenolics
were analyzed by GC/MS-SIM (selected ion monitoring).
                                     55

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     Resin Acids bv  Full  Scan  GC/MS--Full  scan analyses were performed with
a fused silica capillary column (0.25 mm ID x 30 m, DB-5, J & W Scientific).
The GC oven temperature  was  programmed  from 35° C (held 5 min) to 300° C at
8° C/min  (held at  300°  C for 8 min).  The injection internal standards were
d,Q-phenanthrene and  d^-chrysene.   Qualitative identification was based on
retention  "times  and  evaluation  of  mass  spectra.   All  mass  spectra were
reviewed during QA evaluation.

     Chlorinated Phenols  bv  GC/MS-SIM--Chlorinated phenols were analyzed by
GC/MS-SIM.  This technique was chosen  because full  scan GC/MS analyses were
considered  insufficiently sensitive  for-  analysis  of  chlorinated phenols.
Seven  ion  descriptor windows were used in  the 26-min  analysis,  with two to
six  ions  per  window.  Two ions were scanned  for  each  target compound.  The
two  ions  selected  for each compound were typically the two most intense ions
in their  mass  spectra;  for  a given  compound,  both ions represented the same
molecular  fragment,  but  differed  by  two  atomic mass  units (AMUs)  because of
the  natural  isotopic abundances  of    Cl  and   Cl.    Such .chlorine isotope
peaks  are characteristic   -features   of  spectra  of   chlorinated  organic
compounds.   The  spectra of  the  acetate  derivatives  were very  similar to
those  of  the  underivatized  compounds,  because the parent ions including the
acetate group were not predominant.'

     Because  GC/MS-SIM   analysis  does  not  yield  mass   spectra,  qualitative
identification  was  based on  comparison  of   retention  times  and  chlorine
isotope  peak  ratios to those  of  authentic  standards.    A compound  was
reported  as undetected  if its  ion ratio  in a sample differed by more than a
factor of 2  from that  in   the  standard.    This  criterion,  while somewhat
arbitrary,  was  based  on the most  extreme  variations  observed  for  the
injection  internal  standards   (dg-naphthalene,  d10-acenaphthene,  and d1Q-
phenanthrene).  In most  cases, ratios in samples agreed very well  with those
in standards  and  were well  within a factor of 2.  Co-eluting interferences
were assumed to be a predominant  source of variation of ion ratios in sample
extracts.   Of  all  analytes,  2,3,4,6-tetrachlorophenol  most  often  had ion
ratios that deviated from standards by more than a factor of 2.
                                     56

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Detection Limits--

     Sample-specific detection  limits  for chlorinated phenols were based on
instrumental sensitivity  (i.e.,  0.1 ng  on-column,  the lowest concentration
standard used  for initial  calibration), final  extract  volume  (1  ml),  and
sample weight.  Several sample  chromatograms  were examined and the baseline
noise was  estimated  in the  retention  time region  of the target compounds.
Detection limits  were  above three times  the  signal:noise ratio.   Compounds
reported between  0.05 and  0.1  ng on-column  were qualified with  an  E,  and
compounds reported by  the  laboratory at  <0.05 ng on-column were reported as
undetected at the detection limit.

     For resin acids,  sample-specific  detection  limits were based  on a 5 ng
on-column instrumental sensitivity, final  extract volume  (1 ml_),  and sample
weight.   Although  the lowest  standard  concentration used  during  initial
calibration was  25  ng on-column,  the  laboratory analyzed  a  5 ng  on-column
standard and demonstrated linearity from 5 to  150 ng on-column  and acceptable
mass  spectra  at  5:  ng on-column.   Hence, 5  ng  on-column  was considered  a
reasonable basis for detection limits.  "In fact,  acceptable  mass spectra were
observed in  many samples  for  compounds  detected at <5 ng  on-column.   Com-
pounds detected  below the  stated  detection  limits were  reported  with  an  E
(estimated  value)  unless  area counts  were lower than 1000 units,  in  which
case the  compounds  were reported  as  undetected.   For all  compounds except
abietic acid, an area of 1000 units corresponded to 0.3 to  1.6 ng on-column;
for abietic acid, the corresponding concentration was 4 ng on-column.

Initial Performance Tests-

     Initial performance tests were conducted for resin acid and chlorinated
phenols  analysis  because  the  overall   procedures  were not  standardized  or
routine for the laboratory  prior  to this study.    Results from spiked blank
analyses for resin  acids  and chlorinated  phenols  (Table  9) were considered
acceptable.   The resin  acid  spiked  blank analyses  included a silica  gel
column chromatography cleanup step that was not  used during sample analysis.
                                     57

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              TABLE 9.  RESULTS OF  INITIAL PERFORMANCE TESTS
                              (SPIKED BLANKS)

Resin acids:
Sandaracopimaric acid
Isopimaric acid
Palustric acid
Dehydroabietic acid
Abietic acid
Neoabietic acid
14-Chlorodehydroabietic acid
12-Chlorodehydroabietic acid
Dichlorodehydroabietic acid
Chlorinated Phenols^:
2-Chlorophenol
2,4-Dichlorophenol
2,4,6-Trichlorophenol
2,4,5-Trichlorophenol
2,3,4, 6-Tetrachl orophenol
Pentachlorophenol
4,5,6-Trichloroguaiacol
Tetrachl oroguai acol
2,6-Dibromophenolc
4-Bromo-2-chl orophenol0
Spike
Level (ug)

1
1
1
1
2
2
1
1
1

0.04
0.04
0.04
0.04
0.04
0.04
0.04
0.04
0.10
0.10
Percent
Run 1

65
63
47
70
49
45
54
56
63

89
96
82
86
97
87
92
84
96
85
Recovery
Run 2

61
58
39
65
47
41
56
56
65

76
87
76
78
76
75
61
67
94
84
RPDa

6.3
8.3
19
7.4
4.2
9.3
3.6
0
3.1

16
9.8
7.6
9.8
24
15
41
23
2.1
1.2

a Relative percent difference.

b 3,4,5-Trichloroguaiacol was not added.

c Surrogate compound.
                                    58

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Laboratory Analysis for Volatile Organic Compounds

     Sample analysis  followed  a  hierarchical  procedure based on results for
selected  samples.    Thirty-five  samples  were  delivered  to  Analytical  Re-
source's,  Inc.  (Seattle,  Washington).    Ten  samples  were  designated  to be
analyzed  only  if  target  compounds  were  detected  in  specified  associated
samples.  None of the 10 contingency samples required analysis.

     Samples  were  analyzed  by   EPA/CLP  procedures   for  volatile  organic
compounds (purge-and-trap GC/MS).

Ancillary Analyses

Grain Size--

     Grain-size determinations were  performed by Battelle  Northwest Marine
Research Laboratory (Sequim, Washington).  Approximately 25 g of homogenized
wet sediment was treated  with  hydrogen  peroxide to  remove  organic material.
Sediment was then  wet-sieved through a 0.0625-mm screen and the  fines were
collected in a  cylinder.   Sand  and  gravel  fractions  (0.0625 to >2  mm) were
wet-sieved  and  then  dried  to  constant  weight at  90° C.    The  silt-clay
fraction (<0.004 to 0.0625  mm) was treated with a preweighed dispersant and
analyzed by pipetting 20  ml at  30-sec  intervals for 10-in  depth,  and 59-min
intervals for 5-cm depth.   Pipetted  samples  were dried at  90° C to  constant
weight  and  then  corrected  for dispersant  weight.   Results  were  calculated
based on total weight of  the eight  fractions.   The  following size fractions
were evaluated:

                    gravel           - >2 mm
                    very coarse sand - 1-2 mm
                    coarse sand      - 0.5-1 mm
                    medium sand      - 0.25-0.5 mm
                    fine sand        - 0.125-0.25 mm
                    very fine sand   - 0.0625-0.125  mm
                    silt             - 0.004-0.0625  mm
                    clay             - O.004 mm.
                                     59

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Sulfides--

     Water-soluble sulfides were measured by AmTest, Inc. (Redmond, Washing-
ton) according  to the method  described  in Green and  Schnitker (1974).   In
this method,  a  0.005 or  0.05  M  Pb  (0104)2  titrant  was  used  for  sample
titration.

Total Organic Carbon and Total Nitrogen--

     Total  organic  carbon  and  nitrogen  were  analyzed  by  Weyerhaeuser
Analytical and Testing Services (Federal  Way, Washington), using a Carlo-Erba
NA  1500 Elemental Analyzer and following PSEP protocols.

Quality Assurance/Quality Control Results

     Reviews  of sediment chemistry  data were  performed  in  accordance with
•PSEP guidelines (Tetra  Tech  1986g).   QA/QC  reviews  of  chemistry  included
assessments  of  accuracy [using  standard reference  materials  (SRM),  matrix
spikes,   and  surrogate   recoveries,   when  applicable],   precision   (using
analytical  replicates),  initial  and  ongoing  calibration and  tuning,  blank
results,  sample holding  times, and  initial performance tests  or validation
data for  certain non-CLP procedures.

     Detailed  QA  reports  were  prepared  for  chemical  analyses  and were
compiled  in  a  single  document (Tetra Tech 1988a).    These  reports are not
reproduced here, but are summarized below.

Metals--

     The  sample results are  considered  acceptable  as qualified.    Because
precision control  limits were exceeded  for antimony,  all  positive  antimony
data are  considered to be estimated and were assigned  an "E" qualifier.

     Assessment of the Effect of Analytical Procedure  on Metals Results-.Tho
analytical methods  used  to  determine metals in  this study  were designed  to
                                     60

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measure the  total  concentrations  of metals in sediments  (including mineral -
bound components), in contrast to methods that rely on partial digestion.   A
small study  was  conducted  (PTI  and  Tetra Tech 1988) to examine the implica-
tions of using the "total metals" methods, especially when comparing  results
to historical  reference  area  data generated  by "strong acid" methods  (e.g.,
reference  area data from Carr  Inlet).   The  analytical  methods  used  in the
present study  were the same  as those used by PTI and Tetra Tech  (1988) and
analyses were  performed by  the same laboratory  (Battelle Northwest  Marine
Research Laboratory).

     Two archived  Carr Inlet samples collected  during  the Commencement Bay
Remedial  Investigation   (Tetra  Tech 1985a)  were analyzed in  triplicate by
"total  metals"  methods  used  in  the present   study  and  by the "strong acid"
method  (per  EPA CLP) used during the Commencement  Bay  study.  In addition,
selected samples collected during the  Elliott Bay study  (PTI and  Tetra Tech
1988) were  reanalyzed  by the "strong acid"  method  for  comparison purposes-.
The results  are presented in  Table  10.

     Although  differences were  observed for  a number of  metals  analyzed by
both  methods,  the  consistently   largest  differences   were  observed  for
chromium (Table  10).  In both  Carr Inlet  samples,  mean  chromium  concentra-
tions by  "total metals" methods  (in this  case,  XRF) were over  4 times the
mean concentrations  determined by the "strong acid" technique.  Samples with
higher  overall  chromium concentrations  from Port  Susan and  Elliott Bay/
Duwamish River  (PTI  and Tetra  Tech 1988)  tended  to have  approximately   a
factor of 2  difference between  "total metals" and "strong acid" results.

     Differences between antimony results by  "total  metals" vs. "strong acid"
methods could  not  be determined for Carr Inlet samples because antimony was
consistently undetected by the  "strong acid"  procedure (Table 10).  However,
data  reported  for  Samples  CR-11  and   CR-13 during  the Commencement  Bay
Remedial Investigation were  roughly 15  times  lower than  the "total  metals"
values in Table  10.   Similarly,  for Duwamish River Samples WW-12  and  EW-15,
the  "total   metals"  procedure  (including hydrofluoric   acid  digestion  and
analysis by  GFAA)  resulted  in  antimony concentrations  roughly  10-20 times
higher than  concentrations determined by the "strong acid" procedure.  This
                                     61

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                                                       TABLE 10.  COMPARISON OF ANALYTICAL METHODS FOR SELECTED METALS

Reference
Area Samples


Elliott Bay/
Ouwamish
River Samples

CTi
ro



Sample
CR-11 (n=3)
CR-11 (n=3)
CR-13 (n=3)
CR-13 (n=3)
PS-01 (n=l)
PS-01 (n=3)
WW-12 (n=l)
WW-12 (n=2)
WW-12 (n=l)
EW-15 (n=l)
EW-15 (n=2)
EW-15 (n=l)
NH-04 (n=l)
NH-04 (n=l)
KG-06 (n=l)
KG-06 (n=l)
WW-14 (n=l)
WW-14 (n=l)
SS-09 (n=l)
SS-09 (n=l)
Technique
Total metal3
Strong acidc
Total metal
Strong acid
Total metal
Strong acid
Total metal
Strong acid
XRF"
Total metal
Strong acid
XRF
Total metal
XRF
Total metal
XRF
Total metal
XRF
Total metal
XRF
Antimony Arsenic
1.91 + 0.16b 4.47 + 0.79
U0.92 ± 0 2.07 ± 0.09
1.40 + 0.18 3.69 + 1.1
U0.92 + 0 2.48 + 0.52
2.66
DO. 92 + 0
1,200
59 + 6.6
240
150
14 + 1.2
32
504
120
192
27
1,370
217
680
547
Cadmium Chromium Copper
0.09 + 0.01 99 + 26 9.8 + 1.6
0.13 ± 0.01 19 ± 1.5 6.1 ± 0
0.19 + 0.02 84 + 10 12.6 + 0.36
0.22 ± 0.01 19 ± 1.5 6.73 ± 1.4
236 49.8
133 ± 2 43.3 ± 1.1
555 618
266 + 12 920 ± 33
223 176
115 ±.2.8 305 ± 33



•
Lead
4.4 + 1.2
3.6 ± 0.1
8.1 + 0.55
2.2 ± 0.60
10.4
5.6 ± 2.4
1,180
1,510 ± 69
210
330 ± 40




Nickel Silver
17.7 + 3.1 0.043 + 0
13.8 ± 1.3 0.027 ± 0.002
20.6 + 0.85 0.076 +• 0.029
15.1 ± 1.3 0.022 ± 0.007
139
130 ± 2
100
87 ± 3.6
63.8
45.9 ± 2.7




Zinc
28.2 + 1.7
19.3 ± 0.58
34 + 2
19 + 0.6







a Methods used in the present study:   digestion with nitric,  perchloric,  and hydrofluoric acids and analysis by AA (for antimony, cadmium, and silver) or x-ray fluorescence
(for arsenic,  chromium, copper,  lead,  nickel,  and zinc).

  Mean + standard deviation.  All concentrations are  in mg/kg  DW.

c EPA CLP procedure  involving digestion with nitric acid  and hydrogen  peroxide.

  X-ray fluorescence.

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marked discrepancy  prompted reanalysis by  an  independent  and more  reliable
technique for antimony  (i.e.,  XRF).   Comparisons between XRF and the  "total
metals"  procedure  used in  this  study were  confounding  (Table  10),  but
suggest  that  antimony  concentrations observed during  this  study  could be
considerable overestimates  (e.g., by  a factor of approximately 5).

     The XRF  analysis of antimony aroused  sufficient  uncertainty about the
antimony concentrations  reported in  this study that antimony  data  were not
used to  define  or rank problem  areas.   However,  antimony distributions are
discussed  in  the  Results   section   because  of  their  potential   value  in
assessing relative antimony  contamination in Everett Harbor.

Semivolatile Organic  Compounds—

     The  data for  A/B/N organic  compounds are generally acceptable.   The
laboratory followed specified  protocols with the following exceptions:

     •    The  relative response factor  for N-nitrosodiphenylamine  was
          outside control  limits (25  percent difference) for 11  of the
          15  daily  standard  analyses.   Positive  sample results  for
          N-nitrosodiphenylamine in all  samples associated with  the 11
          standard analyses  have been qualified in the database with an
          "E" (estimated).

     •    Benzoic acid  levels  in one of four  blanks exceeded  the PSEP
          control limit of  2.5 ug total (Tetra  Tech  1986g).   Analyses
          were not  halted while investigating  the  cause of contamina-
          tion.    Therefore,  benzoic  acid values  for  the batch  of
          samples run with  this  blank were  qualified with  an "E" after
          blank correction.

     Method blanks were analyzed with each  extraction  batch.  Phenanthrene,
pyrene,  phenol,  naphthalene,   and   2-methylnaphthalene  were  detected  at
relatively low levels in some  blanks  (Table 11).
                                     63

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                           TABLE 11.  METHOD BLANK  SUMMARY
Lab ID
26987018
Date
Extracted
12/1/86
Date
Analyzed
1/1/87
Compound
Phenanthrene
Di-n-butyl phthalate
Pyrene
Bi s (2-ethyl hexyl ) phthal ate
Concentration3
(ug/kg DW)
4
26
3
46
CRDLb
10
10
10
10
27987036     12/8/86     1/14/87   Phenol
                                   Naphthalene
                                   Benzoic acid
                                   Di-n-butyl phthalate
                                   Bi s(2-ethylhexyl)phthalate
                                   Di-n-octyl phthalate
 32
  2
160
160
 48
  4
25
10
10
10
10
10
26987054
12/10/86 1/19/87 Phenol
Naphthalene
Di-n-butyl phthalate
Pyrene
Bi s (2-ethyl hexyl ) phthal ate
Di-n-octyl phthalate
2-Methyl naphthalene
20
4
15
2
44
28
' 2
25
10
10
10
10
10
10

a Concentrations  in  blanks are based upon  80  g wet weight of  sediment  and an assumed
50 percent moisture.   These values provide a means for comparison of blank contamination
to observed concentrations  in sediment samples.
b Contract required detection limit.
                                          64

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PCBs--
     The  PCB  data  are considered  acceptable  when qualified  as estimates.
Qualification was necessary because only a single-point calibration was used
for quantification.  All  positive  results  above 50 ug/kg DW in the database
were generated by GC/MS analyses because of interferences encountered during
GC/ECD analyses.  Precision (based on blind replicates), and accuracy (based
on matrix  spikes and  SRM)  for these analyses were well  within PSEP limits
except  for the  results  of one matrix  spike  (EW-04MS),  in  which  the  PCB
concentration was  considerably  lower than  in  the unspiked  sample.   This
discrepancy was  not explained.  However,  the  relatively high concentration
in  unspiked  sample  EW-04 was  confirmed  by re-extraction  and  re-analysis.
Extracts  for  GC/MS analysis were  held  longer than the  40-day  holding  time
specified  by  the  EPA CLP.    The  extended  extract  holding  time may  have
resulted  in  an  underestimate  of  original  sample  concentrations,  although
degradation of PCBs in solvent  is not  expected because of the well-documented
stability of this class of compounds  (e.g., Hutzinger et al. 1974).

'Chlorinated Pesticides--

     Many  chlorinated  pesticide samples  required  dilution because of inter-
ferences,  resulting  in higher  detection limits than  those  specified  in  the
"Quality Assurance Project Plan for Field Investigations to Support Develop-
ment of  the  Everett Harbor Action Plan" (Tetra Tech 1986f).   In addition,
because of sample dilutions, no precision and accuracy data were obtained for
this sample set.   However,  the review of calibration  data suggests that the
analytical instrument was operating within  acceptable  limits.  PSEP protocols
were used  to  assess the acceptability of  data  and data qualifiers were not
assigned to pesticide  results.

Resin Acids and Chlorinated Phenols/Guaiacols--

     Overall,  data  for  resin  acids  and  chlorinated phenols/guaiacols  are
considered acceptable.  Palustric  acid data were rejected based on 0 percent
recoveries in both matrix spikes;  this was not an unexpected result, as this
compound  is  susceptible  to  isomerization  and  degradation  during analysis
                                     65

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(NCASI  1986).   Data  reported by  the  laboratory were  changed  to detection
limits during QA review if they did not exceed blank values by a factor of 5
or, for chlorinated phenols,  if ion ratios in samples differed from those in
standards by  a factor of  2  or more.   Data were qualified with  an "E" for
several  possible   reasons:  1)  if  data  were  reported  at a  concentration
corresponding to less than  half  the lowest calibration standard;  2) if data
were associated with an ongoing calibration that was outside PSEP limits; or
3) if mass spectra were only marginally acceptable (applicable to only a few
reported values).

     In  the  two  sets  of  duplicate  analyses  performed  for  resin  acids,
precision exceeded the 100  percent PSEP  control  limit for three resin acids
in  one  set  of duplicates   (sandaracopimaric  acid,  isopimaric  acid,  and
abietic  acid)  (Table  12).    Data were  not  qualified  based  on  precision
because  several lines  of  evidence suggested  that  the  low  precision  for
several compounds in Station EW-07 (Table 12) was the result of heterogeneous
sample  contamination  and/or  matrix effects  rather  than  analytical  error.
This argument  is based on the following lines of evidence:

     •    Duplicate  spiked blank  analyses (see Table 9)  resulted in
          precision  of 0  to  9  percent  for  all  resin  acids  (except
          palustric acid, which was rejected)

     •    Precision for matrix spikes  of two  relatively uncontaminated
          samples was <11 percent  for all  resin acids  (Table 13)

     •    Precision for resin acids at  Station  SS-03 (Table 12),  which
          was  a far  less  complex  sediment  matrix than Station EW-07 in
          terms of contaminant assemblage and  sediment texture  (e.g.,
          organic  carbon  content), ranged from 7.4 to  50 percent for
          the  three resin acids detected at Station  SS-03  (the detected
          resin acids  included two of the three resin acids  with >100
          percent precision at Station EW-07).
                                     66

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                   TABLE  12.   PRECISION  FOR  RESIN ACIDS


Compound
Sandaracopi marie acid
Isopimaric acid
Palustric acid
Dehydroabietic acid
Abietic acid
Neoabietic acid
14-Chlorodehydroabietic acid
12-Chlorodehydroabietic acid
Dichlorodehydroabietic acid

Compound
Sandaracopimaric acid
Isopimaric acid
Palustric acid
Dehydroabietic' acid
Abietic acid
Neoabietic acid
14-Chlorodehydroabietic acid
12-Chlorodehydroabietic acid
Dichlorodehydroabietic acid
EW-07a
(ug/kg)
E350
E760
U500
6,300
3,200
E240
1,400
4,100
E640
SS-03
(ug/kg)
E34
E130
U170
E180
U170
U170
U170
U170
U170
EW-16a
(ug/kg)
3,800
6,200
U300
9,500
14,000
680
1,600
5,400
770
SS-03 Dup
(ug/kg)
E85
E140
U210
E300
U210
U210
U210
U210
U210

X
E2,100
E3 , 500
--
5,100
8,600
E460
1,500
4,800
E710

X
E60
E140
--
. .E240
--
--
--
--
--

RPDb
170
160
--
41
130
96
13
27
18

RPDb
86
7.4
--
50
--
--
--
--
--

a EW-07 and EW-16 were blind duplicates.
b Relative percent difference.
                                    67

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             TABLE 13.  RESULTS OF MATRIX SPIKES - RESIN ACIDS
Compound
Sandaracopimaric acid
Isopimaric acid
Palustric acid
Dehydroabietic acid
Abietic acid
Neoabietic acid
14-Chlorodehydroabietic acid
12-Chlorodehydroabietic acid
Dichlorodehydroabietic acid
Spike
Level
(ug)a
50
50
50
50
100
100
50
50
50
Percent
SS-03
88
82
0
98
83
62
84
84
79
Recovery
PS-03
92
87
0
88
87
58
93
92
85
Average
Percent
Recovery
90
85
0
93
85
60
89
88
82
RPDb
4.4
5.9
0
11
4.7
6.7
10
9.1
7.3

a  These  spiking  levels correspond  to  1,300-1,800  ug/kg  DW  (twice  these
concentrations apply for abietic and neoabietic acid).

b Relative percent difference.
                                    68

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Volatile Organic Compounds--

     The  data  for  volatile  organic  compounds   are   acceptable   with  the
exception of  data  for methylene chloride (a common laboratory contaminant).
Methylene chloride values were rejected because of excessive  blank contamina-
tion.

Ancillary Analyses--

     The overall quality  of  sulfide data is acceptable.  However,   the 7-day
holding time  limit recommended by  PSEP  (Tetra  Tech  1986g)  was exceeded for
51 of  64  samples  collected.   The effect of holding time  exceedance is not
clear.    Technical  holding   times  have  been  established   only  for  water
matrices.  It is possible that sample integrity  was compromised by biological
or chemical  changes  occurring  in  the  sample.    Sulfide  concentrations  can
decrease  due  to  the degassing  of  hydrogen  sulfide   or  the oxidation  of
sulfides  to  elemental  sulfur.    The  observation  of undetected  sulfide
(detection  limit = 20 mg/kg  DW)  reported  for  Station  EW-01. was  probably an
analytical,  error,  based  on  the  extremely  strong  sulfur   odor   that  was
recorded in field  notes during  sample collection  and processing.

     Data  for grain  size,   total  organic  carbon,  and  total  nitrogen  were
acceptable without qualification.

BIOACCUMULATION

Field Sampling

     English sole  (Parophrvs vetulus) were  sampled at 10 transects in Everett
Harbor  and  at  1  transect  at  Port  Susan,  a  nonurban  reference  area  (see
Figure 6).  Port Susan was used as  a  reference  area because  previous studies
have found that  the  area  is  relatively uncontaminated  (Malins et al. 1982).
In addition, Malins et al. (1984)  found no  serious hepatic lesions in English
sole collected from that  embayment.
                                     69

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     Sampling of English sole was conducted between  25 August and 2 September
1986.   Fish  were collected using  a  7.6-m (headrope)  Marinovich otter trawl
having a body mesh size of 3.2 cm  (stretched) and cod-end liner mesh size of
0.8  cm  (stretched).   Trawling  was  conducted along  each  transect  at   a
constant  vessel  speed  of  approximately  2.5  kn  during  daylight  hours
(0800-1730 h).

     Five of  60 English sole  (>220  mm)  that  were collected for histopatho-
logical  analysis  (see  below,  Fish Ecology and Histopathology) were  selected
for  analysis  of PCBs,  EPA  priority pollutant pesticides, and mercury  in raw
muscle  tissue.   After removal of  liver  and otoliths,  each fish was wrapped
in aluminum  foil  and stored  on ice until transfer to the freezer  at -20° C.
In the  laboratory,  fillets  of dorsal muscle tissue were excised and skinned
with a  stainless  steel  spatula in  preparation for analysis.

     Dungeness  crabs (Cancer  maaister)  were collected between 25 August and
21 October  1986 primarily  from otter trawls conducted for fish sampling and
from crab  pots  deployed  near the  trawl  stations.    Crabs  from  the East
Waterway (Station EW-91) were obtained from a crab pot fisherman  at Pier 1.
Male crabs  were selected from  the  catch  at  each site, placed in polyethylene
bags,  and stored  live  on ice.  At  the end of each sampling day, samples were
transferred to  a freezer  and stored  at  -20°  C  until  analysis.   In the
laboratory,  crabs were  thawed,  and samples  of cheliped tissue  from eight
crabs   were  composited  into  a  single  sample  per site.    Two   additional
replicate composite  samples were  analyzed for Station EW-91.

Laboratory  Analysis  for Mercury

     Mercury was  the only  EPA priority pollutant metal  analyzed in  fish and
crab tissue because  of its high potential for bioaccumulation.   Digestion and
instrumental  techniques followed PSEP protocols (Tetra Tech 1986g).   Muscle
tissue  was  homogenized and subjected to nitric acid/perchloric acid digestion
at  Battelle Northwest Laboratories  (Sequim, Washington).  The digestate was
analyzed by cold  vapor atomic  absorption spectrophotometry.
                                     70

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Laboratory Analysis for PCBs/Pesticides

Extraction and Cleanup--

     The  analytical  procedure  used  by  Battelle  Northwest  Laboratories
(Sequim, Washington) was derived from Tetra Tech (1986b).  Only the sections
relevant to  analysis  of PCBs and  pesticides  were followed.   The procedure
involves Soxhlet extraction with CH2Cl2/MeOH (2:1, vol/vol), extract cleanup
by gel  permeation  chromatography  (Biobeads  S-X3; elution  with  CI^C^)  and
alumina column chromatography, and capillary column GC/ECD.  Several notable
exceptions to the Tetra Tech (1986b)  procedure were cited in the laboratory's
cover letter:

     •    Soxhlet  extraction  was  carried out for 12 h  rather than the
          specified 24 h

     •    Rotary evaporation  was  used fo'r extract concentration  rather
          than the  specified K-D apparatus.

These two modifications did not  appear to affect laboratory performance based
on results of initial  laboratory performance tests  with SRMs and spiked blanks
conducted by Battelle during a previous  study (PTI and Tetra Tech 1988).

GC/ECD Analysis and Quantification--

     Pesticides and PCBs were analyzed by capillary column GC/ECD with a DB-5
quantification column  (0.25-mm  i.d.  x 30 m, J  &  W  Scientific)  and a SP-608
(Supelco,  Inc.)  confirmation column.   The 80-min temperature program used
for these  samples  allowed  for  a  high degree of  chromatographic resolution
[roughly  76  peaks  were resolved  in a  PCB  standard consisting  of Aroclor
1242:1254:1260 (1:1:1, wt/wt/wt)].

     The quantification procedure  used for PCBs is  described in Tetra Tech
(1986b).    The  procedure  involves   peak-by-peak  quantification   using  an
internal standard.   Relative response  factors  for resolved  peaks  in a PCB
standard containing Aroclors 1242,  1254,  and  1260  (the range of PCB congeners
                                     71

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expected  in  environmental samples)  were  determined by measuring  the  indi-
vidual  peak  concentrations by  GC/MS and  then  using dilutions  of the  same
standard for initial and ongoing GC/ECD calibrations.

     Extracts containing pesticides identified on the DB-5 column were  rerun
on the SP-608 confirmation column.

Quality Assurance/Quality Control Results

     Reviews of bioaccumulation  data  were  performed in  accordance with  PSEP
guidelines  (Tetra  Tech  1986g).    QA/QC  reviews  included   assessments of
accuracy  (using  standard reference materials, matrix spikes, and surrogate
recoveries,  when  applicable),  precision  (using  analytical  replicates),
initial  and  ongoing  calibration  and  tuning,   blank  results,  and  sample
holding times.

     Detailed  QA  reports were  prepared  for  chemical  analyses  and   were
compiled in a single document (Tetra Tech 1988a).  These reports will hot be
reproduced here, but'are summarized in this section-.

Mercury Bioaccumulation—

     Mercury  data  exhibited  accuracy and precision  within  the  guidelines
established by PSEP  (Tetra Tech 1986g).  However, because the 28-day maximum
sample  holding  time  recommended  by PSEP was  exceeded for all of the tissue
samples analyzed, sample  results for  mercury  are considered  to be estimates
and were assigned an "E" qualifier.

PCB/Pesticide Bioaccumulation--

     All detected data  for PCBs  in tissue were  qualified as underestimates
("G",  or  greater  than)   because  of  low  analytical  recoveries  observed
throughout  the  sample  case.    Recoveries of the  two  surrogate  compounds
[4,4'-dibromooctafluorobiphenyl  (DBOFB)  and  isodrin]  in  most  samples, and
PCB recoveries in all  three tissue matrix  spikes,  were  below PSEP limits of
50 percent for  accuracy (Tetra Tech  1986g).  An  interlaboratory comparison
                                     72

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with selected tissue samples and using a  similar extraction/cleanup procedure
confirmed  the  low PCB  recoveries  for   Battelle.    The  cause  of  the  low
recoveries could not be identified and recoveries did not  improve during  re-
extraction  and  re-analysis  of  selected samples.    In  addition,   an  "E"
qualifier was  assigned  to  samples associated with ongoing calibrations that
were  outside  control  limits.   Sample  and  extract  holding  times  exceeded
PSEP  guidelines;  however,   the  target .analytes (particularly  PCBs)  are  not
very  susceptible  to microbial  or chemical  alteration,  particularly  at  the
reduced temperatures of storage.  No  additional qualification was considered
necessary to address holding  time exceedances.

SEDIMENT BIOASSAY

Field Sampling

     Sediment  toxicity  tests  with Rhepoxvnius abronius  were performed at 29
stations  in  the Everett Harbor system and  three  stations in the reference
area  (Port  Susan).   A subsample  of  the  composite sediment sample collected
for chemical  analyses  was  tested for  toxicity using  the amphipod bioa-ssay.
Field  collection  methods   for  sediment  samples  are  described  above  (see
Sediment Chemistry, Field  Sampling).

     The  infaunal  amphipod R.  abronius  was  collected  subtidally  from West
Beach on Whidbey  Island  (Washington)  using a bottom dredge.  Amphipods were
maintained  and  transported in clean  coolers  with  ice,  and were returned to
the laboratory within 18 h  of collection.

Laboratory Analysis

     Following  their  arrival  in  the  laboratory,  amphipods  were  kept  in
holding containers  filled  with  fresh  seawater (28 ppt  salinity)  and  clean
sediment  and  maintained  at  15+1° C  under  continuous  light  until  used  in
testing.  Cultures were aerated but not  fed  during acclimation and were held
for not more  than  10  days.  Prior to testing, amphipods were sorted  by hand
from sediments and identifications were  confirmed using  a  Wild M5 dissecting
microscope.  Damaged, dead, or  unhealthy  individuals were  discarded.
                                     73

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     Interstitial  salinities  of  all  test sediments  were  measured before
testing.  Of the 34 sediments tested (32  stations plus two field replicates),
10  had  interstitial  salinities  less  than 25  ppt:   samples  from  Stations
ES-01,  ES-02, ES-03, NG-12, NG-14,  SR-01, SR-02, SS-01,  SS-03,  and  SS-07.   In
each case,  interstitial  salinity  was elevated  to  at  least 25 ppt by mixing
the  sediment  with water of-  a sufficiently high salinity  following methods
outlined by PSEP protocols (Tetra Tech and E.V.S.  Consultants  1986).

     Acute  lethality  of  amphipods  exposed for  10  days  to  whole,   fresh  (un-
frozen) sediments was measured using the methodology of Swartz et  al. (1982,
1985) as amended by PSEP protocols  (Tetra Tech and E.V.S. Consultants 1986).
A 2-cm  layer  of  test  sediment was  placed in  1-L glass jars and covered with
800 ml of clean seawater (28 ppt salinity). Each beaker was seeded (randomly
and  blindly)  with 20 amphipods and aerated.    Six  replicates (20 amphipods
each) were  run per test sediment.   Five beakers  served to determine toxicity,
while the sixth  beaker served as  a reference  for  daily measurement  of water
chemistry (i..e.,  pH,  dissolved oxygen, salinity,  and  temperature).  Testing
was conducted at 15±1° C under constant light.  Test containers were checked
daily  to  establish early  trends  in mortality  and sediment  avoidance,  and
also to gently sink  any  amphipods  that had left the sediments overnight and
become  trapped  by surface tension  at  the air/water  interface.   A  negative
(clean) control  sediment from the  amphipod  collection site  at  West Beach,
Whidbey Island was  tested  concurrently with  each  series of test  sediments.
Following PSEP protocols  (Tetra Tech  and E.V.S. Consultants 1986),  cadmium-
spiked  (CdCl2)  seawater  was  used  as  a positive control to verify that the
amphipods  were  responsive.    Amphipod   bioassays  were   initiated  on  all
sediments within a 2-week period following field collection of sediments.

     Bioassay tests were  terminated after 10 days, when sediments were sieved
(0.5-mm  screen),  and  live  and  dead  amphipods were  removed and  counted.
Amphipods were   considered  dead  when there  was  no  response to  physical
stimulation  and  microscopic  examination  revealed  no  evidence  of  pleopod  or
other movement.   Missing amphipods  were  assumed to have died and  decomposed
prior to the termination of the bioassay (Swartz et al. 1982, 1985).
                                     74

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Quality Assurance/Quality Control Results

     Mean  mortality  ranged from  4  to  10  percent  in  the  clean  sediment
(Whidbey  Island)  controls.   A mean  mortality  of  10  percent is considered
acceptable  for amphipod  sediment  bioassay  controls  (Swartz  et  al.   1985).
ANOVA indicated no significant differences (P>0.05) in mean mortality  values
among the clean sediment controls.  Mortality in cadmium-spiked seawater was
100 percent, which is consistent with the expected mortality  rate.  Intersti-
tial salinities  in nine sediment  samples  were not  acceptable according to
PSEP Protocols  (Tetra Tech  and  E.V.S.  Consultants 1986)  and were adjusted
following  the  PSEP  Protocols.  Dissolved  oxygen  concentrations  in  water
overlying the sediments in  the bioassay chambers were acceptably high.

     The  amphipod bioassay results  are  considered  acceptable  for  use in
problem area  identification.   However,  it  should  be noted that the data for
the following  stations  showed  high  variance  (standard error >12), generally
due to an extreme outlier replicate:  SR-07,  EW-10, and OG-03.

BENTHIC MACROINVERTEBRATES

Field Sampling

     Benthic macroinvertebrates were collected at 16 stations  in the Everett
Harbor study  area and three stations in  the Port Susan reference area between
30 September  and 15 October 1986 (see Figure 5).  Station depths ranged from
3.4 m to 21.4 m among the 19 stations.  Most of the stations were located at
depths of  7.9 m to  12.8  m, but  it  was not possible  to  sample  within this
depth range at all stations  because of differences  in shoreline bathymetry.

     Five replicate grab samples were collected at each station,  for a total
of 95 samples.  All  samples were collected using a 0.1-m^ modified van Veen
grab sampler.  In the field, samples were washed on a sieve with 1.0-mm mesh
openings and  fixed with a  10 percent solution  of buffered formalin.   Sample
tracking records followed each sample through all  stages of sample collection
and laboratory processing.
                                     75

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     The  field  sampling methods  used to" collect  benthic macroiinvertebrate
samples during the  Everett  Harbor survey  are outlined in the PSEP protocols
(Tetra Tech 1986g) and the "Quality Assurance Project  Plan for Field Investi-
gations to Support Development of the Everett Harbor Action Plan" (Tetra Tech
1986f).  The following discussion summarizes those procedures.

     Following deployment and  retrieval of the  van Veen grab, it was placed
in a sieve stand and the sediment sample was  inspected carefully to determine
the acceptability of the sample.  Samples were rejected if excessive leakage
or surface disturbance occurred.  Samples were also rejected if they did not
meet or exceed the following minimum penetration depths:

     •    Medium to coarse sand and gravel - 4 to 5 cm

     •    Fine sand and sandy silt - 7 to 10 cm

     •    Silt - 10 cm.

When a sample was judged to  be  acceptable,  the following qualitative sediment
characteristics were recorded:

     •    Penetration depth

     •    Sediment texture

     •    Sediment color

     •    Presence and strength of odors

     •    Degree of leakage and/or surface disturbance

     •    Presence of debris or shell fragments.

     After the foregoing observations were recorded,  the  sampler was  opened
and the sediment was released into the top section  of the sieving stand.  The
sediment was then washed from above with  a gentle spray of seawater,  and the
                                     76

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larger masses  of sediment  were broken apart.   Sediment was  rinsed  into a
sieve box in the-lower level of the sieving stand.   The sediment  in the sieve
box was then completely washed  until  materials  no  longer passed through the
1.0-mm mesh  screen.   That  portion retained on  the screen was  placed  in a
plastic sample  bag  having  external  and  internal labels.  Samples  were then
fixed in the field with a 10 percent solution of Borax-buffered formalin.

Laboratory Analysis

     In the  laboratory,  benthic macroinvertebrate  samples were  washed  on a
0.5-mm sieve and  transferred to a 70  percent  solution  of isopropyl  alcohol
for long-term preservation.  Organisms retained  on the sieve were sorted into
major taxonomic groups (e.g., polychaetes, molluscs, crustaceans, misc.)  and
enumerated.   Planktonic  organisms that  occurred  in the  samples were  not
enumerated.  Colonial  organisms that occurred  in the samples  were noted as
"present" but also were not enumerated.

     Quality' control checks of sample sorting were performed by resorting 20
percent of  each  sample.   The 20-percent  aliquot was taken after the entire
sample had  been  spread  out on  a sieve with  0.025-mm mesh  openings.   If  the
20-percent  re-sort   indicated   a  calculated difference  of  5.0  percent  or
greater in  total  sample  abundance for all  taxa combined,  the  entire sample
was resorted.  Tetra  Tech  also  performed  independent quality control  checks
of sorting procedures (including checks of 20-percent aliquots) and checks of
abundance counts for the major taxonomic groups.  Samples that failed either
quality control check were  resorted completely.

     Organisms in the  samples  from Everett  Harbor  and  Port  Susan (i.e.,  19
stations)  were  identified  to   the   lowest possible  taxonomic   level  and
enumerated.   Specimens  of  each   species  (or   lowest  possible  taxon)  that
occurred in  the  Everett  Harbor study  area  were placed  in reference museums
prepared by the taxonomists.
                                     77

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Quality Assurance/Quality Control Results

     QA/QC procedures resulted  in  an  acceptable  data set without qualifica-
tion.  Quality  control  checks of sample  sorting,  organism enumeration, and
identification followed  the  guidelines  recommended by PSEP protocols  (Tetra
Tech 1986g) and the "Quality Assurance Project Plan for Field Investigations
to Support Development of the Everett  Harbor Action Plan"  (Tetra Tech 1986f).

FISH ECOLOGY AND HISTOPATHOLOGY

Field Sampling

     Field  sampling methods  were  described  earlier  (see Bioaccumulation,
Field  Sampling).    English  sole larger than  220-mm total  length  (TL) were
selected for histopathological analysis.  This size limit was used to  ensure
that most  fish were  greater than  2  yr old.   A  selection  criterion  based
indirectly on  age  was  used because English sole younger  than  2  yr old have
substantially  lower prevalences of hepatic lesions  than  older fish7 (Maiins
et al. 1982).  The  present study therefore focused on those fish most  likely
to be afflicted with hepatic lesions.

     Sixty  English  sole  of appropriate  length  were  collected  at  every
transect,  yielding  a  total  of 714  fish for  the  overall  study.  Immediately
after collection,  each  selected fish  was sacrificed  by  a blow to the head,
measured  to  the   nearest  millimeter  (TL),   examined  for grossly  visible
external  abnormalities   (e.g.,  fin  erosion,   skin  tumors,  scoliosis,  para-
sites), and transferred to the shipboard laboratory for liver removal.

     In the shipboard laboratory,  the  liver  of  each fish was removed  in its
entirety,  cut  into multiple sections,  and  examined for the  presence  of
grossly  visible lesions.    If   lesions  or  discontinuities were  noted,   a
subsample  was  taken from the affected  area  for  histopathological  analysis.
If the liver appeared to be normal, a subsample was taken  from the center of
the  organ  at  its broadest  point.   Each  subsample was fixed  in  10  percent
neutral-buffered formalin.   After the  liver was removed from each individual,
                                     78

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the sex of  the fish was noted  and  the otoliths (sagittae)  were removed for
subsequent age determination.

     All fishes in  the  remainder  of the catch at each transect were identi-
fied to species and counted.   All  English sole not selected for histopatho-
logical analysis were measured  (nearest mm TL) and counted.

Laboratory Analysis

     Each formalin-fixed liver was  dehydrated in a graded series of ethanol,
cleared in xylene,  and embedded in  paraffin.  Embedded livers were sectioned
at  4  urn using  a  rotary microtome  and stained using  hematoxylin  and  eosin
(H&E).    Prepared  slides were  examined  using  conventional  light microscopy.
Each slide was coded, so the pathologist did not know where the corresponding
fish was captured.   Lesion  identifications  were confirmed by Mr. M.S.  Myers
(Chief  Pathologist,  Northwest and  Alaska Fisheries Center)  to ensure  their
consistency  with  the  identifications  made by  Malins et  al.  (1980,  1982,
1984).

     Three   major   kinds   of  idiopathic  hepatic  lesion  were  evaluated:
neoplasms, foci of  cellular alteration, and megalocytic hepatosis.   Briefly,
neoplasms  include  both  benign  and malignant  tumors.    Foci  of  cellular
alteration  are  discrete  clusters   of  altered  cells  that  have  specific
staining characteristics and  are  suspected  of being preneoplastic.   Megalo-
cytic  hepatosis  is a  specific degenerative  condition  characterized  by  a
marked  increase in  both  nuclear and  cellular  diameters in the  absence of
cellular inflammatory responses.

     Prevalences of  all three major lesions  have been  found to be elevated in
English sole from urban embayments  of Puget Sound  (e.g.,  Malins et al.  1984;
Becker  et  al.  1987).   In  addition,  Myers et  al. (1987)  found consistent
patterns  of co-occurrence  of  these  lesions  in  English  sole from  Eagle
Harbor.   Based  on  those  patterns  of  co-occurrence  and comparisons  with
similar lesions  induced in rodents following  laboratory  exposure  to chemi-
cals,   Myers  et al. (1987)  concluded  that megalocytic  hepatosis,  foci  of
cellular  alteration,  and   neoplasms  may  be  related  sequentially in  the
                                     79

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progression towards  hepatic neoplasia in  English  sole.    In  that scenario,
the following steps are thought to occur:

     •    Megalocytic hepatosis and associated degenerative lesions are
          induced'as  the  initial,  subchronic to chronic manifestations
          of the cytotoxic effects of hepatocarcinogens.  These lesions
          form the proper stimulus for a proliferative response.

     •    In  the  above  environment  favoring  proliferation,  foci  of
          cellular  alteration  develop.     Because these  lesions  are
          selectively resistant to  the  cytotoxic effects of  hepatocar-
          cinogens,  they  have a  growth  advantage over  normal  hepato-
          cytes.

     •    Autonomous, neoplastic  hepatocytes  arise from the  nonautono-
          mous  foci  of cellular  alteration  to  form  neoplasms.   This
          final transformation is probably a complex,  multistep process
          of mutation followed by selection.

Quality Assurance/Quality Control  Results
     Lesion  identifications  were  confirmed  by Mark  Myers of  the National
Marine  Fisheries  Service.    To  ensure consistent  identification  of lesions
between the  three  pathologists  for this project,  each  examined slides from
every  station.   For all three  major  kinds of lesions, the  numbers of each
lesion  identified  by  the  three  pathologists were  very  similar,  implying
consistent diagnostic  criteria.   In  addition,  the relative  prevalences  of
neoplasms  and  foci  of cellular  alteration  among stations and  among  lesion
types  were similar  to  results from previous  studies  by the  National  Marine
Fisheries  Service  (Malins  et al. 1980).   Although the  relative prevalences
of  megalocytic  hepatosis   among  stations were   consistent  with  patterns
identified by  Malins  et al.  (1980),  the absolute values  found during this
study were considerably lower than those found by Malins et al.  (1980).  The
pathologists   were  aware  of  this  apparent  discrepancy  shortly  after  the
laboratory  analyses  began  and  therefore  paid  particular  attention  to
identifying  the  presence  of this  abnormality.    In  addition,  a  review  of
                                     80

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selected  slides  by  M.  Myers  confirmed  the  relatively  low  prevalence of
megalocytic  hepatosis.   Therefore,  it  was  concluded  that  the prevalences
observed  in  this study  were  accurate.   .The  final  histopathology data  were
considered acceptable  without qualification.

DATA MANAGEMENT

     To  facilitate  data  storage,  QC,  and  analysis; recent  and historical
data  from  the   Urban  Bay  Action  Programs  have been  incorporated  into  a
microcomputer database.   The database  software performs a wide variety of
retrievals,  reports,  and analyses.   It also  allows  data  to  be transferred
directly  to  other software  (e.g.,  SPSS/PC+  and Lotus 1-2-3)  for statistical
analyses  and graphic  displays.   A library system  is incorporated  into the
database  to  document data sources, changes to  data, and other information to
be linked to sample measurements.

Data Organization

     Data are  linked so that related kinds  of information  can be retrieved
together  for interdisciplinary analyses.   For example, sediment chemistry,
infauna abundances,  and  bioassay  data can  be retrieved  into a single table,
based  on  common  samples  or stations.   During  data  retrievals,  data  can be
summarized across laboratory replicates and field replicates as requested by
the user.

     The  database design  requires  that  only actual measurements be recorded.
For example, if  cadmium was measured at  all  stations  but one during a survey,
no value  for cadmium need  be stored for  that single station.  This reduces
ambiguity and complexity  of the database as well as storage requirements and
retrieval speed.  For  biological effects data,  a distinction  is made between
"not significant" (as  compared to  a reference  area) and "not evaluated."

     Each data  value  is  associated  with a single survey  and station.   The
survey identifies the  sampling program  responsible for  data collection.  The
station coordinates identify a unique geographic position sampled during  that
survey.  Stations are described by an  identifier,  latitude and  longitude, and
                                     81

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basin and  subbasin codes.   Samples collected  at each station  are further
identified by a unique sample ID,  the date of collection, and field replicate
number.   Data of any type can be retrieved by:

     •    Date - all dates or a specified range

     •    Survey -  any  survey or only  data from one  or  more specific
          surveys

     •    Station - any station or  only  data from one or more specific
          stations

     •    Basin and subbasin - any basin/subbasin or only data from one
          or more specific basin/subbasin.

These criteria allow  any  subset of  the  data to be retrieved or combined for
analysis.

Data Analysis

     Procedures for summarization of data are  programmed  into the database,
providing consistent  treatment  and  formatting  of the  data  for analysis and
interpretation.  These procedures include,  for  example,  the ability to rank
observations by station  or chemical;  create new  variables  (such as sums of
HPAH and LPAH); construct species  lists by replicate, sample, or station; and
compare data to AET or other sediment quality  values.   Statistical analyses
were carried out using SPSS/PC+, and Lotus 1-2-3 was used for other analyses
and data manipulations.

Data Entry and Quality Control

     QC  of  data  entry was  based  upon  technical  evaluation  of  the  data,
automated  error-checking   procedures  in  the  database,  and consistent  and
reliable automated procedures for retrieving and  summarizing  the data.  All
additions of data and modifications to  data were documented,  and the appro-
priate document reference code linked to the affected samples.   The date was
                                     82

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automatically inserted in all permanent output from the database.  Technical
review of the data was carried out before data entry and during analysis and
interpretation.  Automated error-checking procedures were used to screen data
to preclude  erroneous codes,  duplicate  data,  and insufficiently  or incor-
rectly  identified data   (e.g.,  measurements that  are  not  assigned  to  a
previously defined  station).   All  access to  the database was  carried  out
through  a series  of menus  and  prompts,  ensuring that  all  summaries  and
analyses were carried out in a consistent and replicable manner.
                                     83

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                                  RESULTS
     Results of  field  investigations in the  Everett  Harbor system and Port
Susan  are  presented  in  the  following   sections  on  sediment  chemistry,
bioaccumulation,  sediment  bioassays,  benthic macroinvertebrates,  and fish
ecology  and  histopathology.   An  evaluation  of  data collected  during the
present  study  and  comparisons  with  recent  data from  previous  studies  is
provided in each section.

SEDIMENT CHEMISTRY

     The following  section  provides a summary of chemical  results  for over
50  subtidal  and intertidal  sediment  samples  collected  from the Everett
Harbor system and an additional  three samples collected from the Port Susan
reference area.  Not all target, chemicals were measured at all.stations.  At
54  stations,  chemical   data were  collected  for •!!  EPA  priority pollutant
metals, 54 acid/base/neutral EPA priority pollutant organic compounds, PCBs,
19  chlorinated  pesticides  (mostly  EPA priority  pollutants),  10  additional
Hazardous  Substance List  compounds,  and  15 selected  TIO  compounds  (see
Table 1).   At  31  stations,  including some  of  the  54  stations discussed
above,  eight  resin acids  and  nine  chlorinated  phenols  and  chlorinated
guaiacols were  analyzed by  dedicated procedures (see  Table 1).   Nineteen
samples  were  also  analyzed  for 35  volatile  organic  compounds  (mostly EPA
priority  pollutants).    TBT  was  measured  at two  stations.    In addition,
sediment  conventional  variables  (e.g.,  grain size  distribution  and  total
organic  carbon   content)  were  analyzed  in all  60 sediment  samples.   The
objectives of this section are to:

     •    Provide a chemical  perspective  of  the Everett  Harbor  study
          area,   including  the  general  distributions,  concentration
          ranges, and frequencies of detection of chemical contaminants
                                     84

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     •    Determine the magnitude of  contamination relative to reference
          area conditions  and to  determine the  significance of  this
          contamination relative to Puget Sound reference areas

     •    Summarize spatial correlations  to define  groups of chemicals
          with similar distribution patterns

     •    Interpret historical data to  supplement the sediment chemistry
          results of the present study.

All chemical data and sediment conventional  data are presented  in Appendix B.

Normalization of Chemical  Concentrations

     Sediment concentrations presented  in  this  report are typically expressed
as the  weight of contaminant  per  dry  weight of sediment  (e.g.,  ug/kg DW).
Normalization of  sediment  concentrations  to other  variables [e.g.,  percent
organic carbon or percent of fine-grained material  (silt plus clay)]  can aid
in the  interpretation  of  contaminant distributions  by focusing  on  the most
contaminated  fractions  of  sediment,   thus reducing  the   significance  of
variations in less important components of sediment  texture and composition.
The following is a brief description  of each type of normalization.

Dry Weight Normalization--

     Most sedimentary  contaminants are associated primarily with  the solid
material  in  bulk  sediments,  not  with  the  interstitial  water.   Thus,  dry
weight contaminant concentrations are preferred to wet-weight concentrations.
Use of  dry  weight concentrations  precludes  the  possibility that variations
in sedimentary moisture content  will obscure informative trends  in  chemical
data.

Total Organic Carbon Normalization--

     Chemical concentration  gradients, particularly  of  nonpolar,  nonionic
compounds,  have  been  observed to correlate well  with  sedimentary  organic
                                     85

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carbon content  (e.g., Choi  and Chen  1976).   This  observation  is commonly
interpreted in one of two ways:

     1.   Organic  matter  is  the   "active  fraction"  of  sediment  and
          serves as a sorptive sink for neutral,  and possibly polar or
          metallic, compounds

     2.   Carbon-rich particles may  be an important  transport  medium
          for  contaminants  [e.g.,  HPAH  may  be  associated  with  soot
          particles (Prahl and  Carpenter 1983)].

The  occurrence of  multiple  contaminant  sources  in a  localized area  can
obscure gradients of concentrations normalized to TOC content.

     Strong  correlations  of  dry  weight  chemical  concentrations with  TOC
content,  a good indication of  the appropriateness of TOC normalization, were
typically not observed in  this study,  even  in the area with highly elevated
TOC concentrations (the East Waterway). Thus, TOC normalization is mentioned
infrequently  in  this - section.    Notably,  many  .of  the  organic  chemicals
observed  in  this  study  were  ionizable (e.g.,  phenols).    Such  relatively
polar  compounds  do not  conform well  to  the  assumptions  of organic  carbon
normalization theory.

Normalization to Percent Fine-Grained  (<63 urn) Particles--

     On  a  limited  spatial  scale,  contaminant  concentrations  are  often
inversely correlated with particle size (e.g.,  Lee 1985).   Thus, contaminants
(especially  metals)  may  be concentrated  in  the fine-grained particles  of
bulk  sediments.   This  observation is  often  explained  in  terms -of  surface
area,  in  that  finer particles  have greater specific surface area,  and thus
greater sorption  capacity,  than larger particles.   However, organic  carbon
content also tends to vary inversely with particle size  in natural sediments
(Choi and Chen 1976).  Thus, normalizing to percent  fines may be effectively
equivalent to normalizing to organic carbon content  in natural sediments.
                                     86

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Bulk Sediment Characteristics

     Bulk  sediment  characteristics measured  for this  study  included grain
size distribution  (as  percent  sand,  silt,  and  clay),  TOC,  nitrogen,  and
water-soluble sulfides.

Grain Size--

     Average percentages  of fine-grained material in  the  seven study areas
and  Port  Susan  are  presented  in  Figure 7.    Several  general  trends  are
apparent.   Sediments  from  Nearshore Port Gardner  (Area NG)  were the most
coarse-grained  of  all  study  areas,  probably  because  fine-grained material
cannot  accumulate  under the existing current  velocities  and wave energies.
Four  of the  NG stations were  intertidal.   Sediments further offshore  in
deeper  water  (Area OG) were  more  fine-grained.  Sediments  in Ebey Slough,
Steamboat  Slough, and  the Snohomish  River Delta study  areas were  relatively
coarse.    Most  of  the sediments  collected  from the  Snohomish  River were
relatively coarse (<20 percent fines); however, Stations SR-04  and SR-05 had
predominantly fine-grained sediments (>60 percent fine-grained  material) and
Station  SR-07  (located in a sheltered area of the  Snohomish River, outside
the main channel) had  the highest percentage of fine-grained material  in the
study  (96  percent).   Fine-grained sediments at  these  three SR stations are
responsible  for the  elevated mean  in  Figure  7.   Sediments in  the East
Waterway  were  typically  the most   fine-grained in   the  study,  probably
because of the proximity of sources of fine-grained material, and  because  of
relatively  quiescent  conditions  within  the  waterway.   Sediment  texture  of
Port  Susan reference  sediments  collected  during the 1986  Everett  Harbor
survey was relatively  coarse (<15 percent fine-grained material at all three
stations).

     A  more  detailed  summary   of  grain-size  distributions   in   the East
Waterway is presented  in Figure 8.  The stations  are arranged geographically
in  Figure  8,  with the  eastern shore  of  the East Waterway  at  the bottom  of
the figure and  the  head (i.e., north end) of the waterway on the  right side
of the  figure.   Most  sediments were  predominantly fine-grained (>50 percent
fine-grained material)  with  the  finest sediment  texture at  the head of the
                                     87

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            of the East Waterway.
                               89

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waterway  (Stations  EW-02 and  EW-03,  >90  percent  fine-grained material).
However,  sediment  at Station  EW-12  was  unusually coarse  relative  to other
sediments  along the east  shore  (<10  percent fine-grained  material),  and
sediments  at  Stations EW-14  and EW-15 near the  mouth  were also relatively
coarse  (30 to 40 percent  fine-grained material).

Total Organic Carbon--

     Sediment  TOC  concentrations (Figure  9)   displayed  trends  similar to
those observed  for percent fine-grained material.   The correlation between
percent  fine-grained material and TOC was  moderate  (r=0.71,  n=60,  PO.05),
based on a regression  that  included  all  sediment  stations.   A comparison
between   sediments   collected  from  nearshore  and  offshore  Port  Gardner
illustrates  this  relationship.    With the  exception   of  a  single station
(NG-09),  the  relatively  coarse-grained  sediments collected  in  Area  NG had
less  than 1  percent  TOC content.    The  finer-grained offshore  sediments
(Area OG)  had higher levels  of TOC (2  to 4 percent).  The relatively coarse
sediments  in   Ebey  Slough  and  Steamboat   Slough  displayed  relatively  low
levels  of TOC  (<1  percent),  as did sediments from the Snohomish River (with
the  exception of relatively fine-grained Stations SR-04,  SR-05,  and SR-07).
The  fine-grained sediments  in  the  East Waterway had  extremely high  levels of
TOC  (mean  of 11  percent,  maximum of 29 percent).

     A  more  detailed summary  of TOC distributions  in  the East  Waterway is
presented  in  Figure 10.   TOC  and fine-grained content  of  sediments did not
covary  well within  this  waterway.  Wastes  rich in organic matter discharged
into the  East Waterway  likely account  for the highly elevated TOC  levels in
this area and for  deviations  from the  inverse relationship between particle
size  and  TOC  content  often   observed  in  natural  sediments.    The highest
levels  of  TOC were  found  at Stations EW-04 and  EW-13 (23 to 29 percent), not
in the  very fine-grained  sediments near the head of  the waterway.

     Average  molar  organic  carbon to  nitrogen  (C/N)  ratios in the  seven
study areas and  Port Susan are summarized in Figure  11.  The molar  C/N ratio
can  provide information  about the type  of  organic matter  in the sediments.
For  example,  marine phytoplankton  are observed to  have a  C/N  ratio of
                                     90

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             weight) in sediments of the East Waterway.
                             92

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                                                                                              LEGEND
NG
OG   EW    SD    SR
                                                          SS
                               rh
                                                                      ES
                                                P S    Port Susan
                                                NG    Nearshore Port Gardner
                                                OG    Offshore Port Gardner
                                                EW    East Waterway
                                                S D    Snohomish River Delta
                                                S R    Snohomish River
                                                S S    Steamboat Slough
                                                E S    Ebey Slough
                                        STUDY  AREA
               Figure 11.   Average carbon/nitrogen (C/N) molar ratios in sediments from all study areas.

-------
approximately 7, soil  and  participate  material  in rivers have C/N ratios of
10 to  15,  and woods have  considerably  higher  C/N ratios (e.g., between 150
and  550;  Hedges et al.  1985,  1986).    Average  C/N ratios  were relatively
consistent  (between  15 and 25) among  Everett  Harbor  study  areas except for
East Waterway and' offshore Port  Gardner,  which had average  molar C/N ratios
of approximately .40.  Two stations  in the East  Waterway,  EW-04 and EW-13,
exhibited anomalously high C/N ratios (69 and 100, respectively).  These ele-
vated ratios are consistent with pulp mill activities in this area, although
other source materials (e.g., coals) also have relatively high C/N ratios.

Sulfides--

     The  distribution  of  water-soluble  sulfide  concentrations  in sediments
is  summarized  in  Figure  12.    Because sulfide  is  indicative  of  sulfate-
reducing  (poorly oxygenated)  conditions,  it  is common  for sulfide levels to
be  high  in  areas  that  are  rich  in  organic  material  and  high  in  oxygen
demand.   In  general,  this  relationship  was  observed  in  this   study.   The
correlation  between TOC and  sulfides  was moderate  (r=0.61,  n=60,  PO.05).
Mean sulfide  concentrations in Port Susan.and throughout most  of the study
areas were relatively  low  (<120 mg/kg DW).  The highest mean  (3,000 mg/kg DW)
and  individual  (11,000 mg/kg  DW)  sulfide  concentrations were  found  in  the
East Waterway.   The highest sulfide concentration at  an individual  station
outside of  the  East Waterway was  600  mg/kg  DW observed at  Station SR-07 in
the Everett marina.

     A more detailed summary  of  sulfide concentrations in the East Waterway
is presented  in Figure 13.  With  the  exception  of Station  EW-01, sediments
near the  head of the waterway contained the  highest sulfide concentrations.
The  undetected  sulfide value  reported  at  Station EW-01  (detection  limit =
20 mg/kg  DW)  is probably  an analytical  error, based  upon an observation of
an  extremely  strong sulfur odor  that was  recorded  in  field  notes  during
sample  collection  and  processing.    Sulfide  concentrations  decreased toward
the mouth of the waterway.  The discharge of sulfite pulp wastes  in the East
Waterway and sulfur-rich discharges from a storm drain in the northeast cor-
ner of the waterway  are  probably important sources of sulfur and relatively
high oxygen demand in this  area  (particularly at the head of the waterway).
                                     94

-------
10


3200 -
2800 -
•£? 2600 -
"§) 2400 -
| 2200 -
^ 2000 -
TJ 1800-
0) 1600-
0) 1400 -
.§, 1200-
0) 1000-
111
Q 800 -
n*
_i
5> 40° "
200-
0-


i — i
11,000
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^:



/-



LEGEND

Bg2
IQ-
1 	 r< MEAN 1 Z !j
RT !l




RANGE
P S Port Susan
NG Nearshore Port Gardner
OG Offshore Port Gardner
EW East Waterway
S D Snohomish River Delta
S R Snohomish River
S S Steamboat Slough
-t E S Ebey Slough
f~T-l I" — 1 , 1
PS NG OG EW SD SR SS ES

STUDY AREA


Figure 12. Average sulfide concentrations (mg/kg dry weight) in sediments from all study
areas.



-------
         10.000 -i

          9000 -

          8000 -

          7000 -

          6000 -

          5000-

          4000 -

          3000 •

          2000 -

          1000 •

            0
10,000-

 9000-

 8000-

 7000-

 6000-

 5000 -

 4000-

 3000 -

 2000-

 1000-

   0
                                         EW-11   EW-09   EW-06   EW-03
Jd 12.000 -
0)
- 11.000-
3 10,000^
>, 9000 -
^ 8000 -
O) 7000 -
-~ 6000 -
O)
g 5000 -
4000 -
[(j 3000 -
Q 2000 -
~j 1000 -
3 n













^//
/ / /













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'///,








y/y
' / s
/////-/
/////
y7//.
II
/-/<•
                                               EW-08  EW-05   EW-02
                                                          1
              EW-15   EW-14   EW-13   EW-12   EW-10   EW-07   EW-04   EW-01
                                 STATIONS
Figure 13.  Sulfide concentrations (mg/kg dry weight) in sediments
             of the East Waterway.
                                96

-------
Sediment Chemistry;  Metals

     Concentration  ranges  and  detection  frequencies  for  the  14  metals
analyzed  in  this  study  are  presented   in  Table  14.   All  metals  except
selenium  and TBT"  were  detected  in  all  samples  analyzed.   Concentration
ranges were  broad  for many  of the  metals,  spanning two  to three orders of
magnitude.   Maximum  values  of most  metals  occurred  in the  East Waterway
(Table  14).   This  broad  range  in  sediment metal  concentrations  can be
attributed  to a  single  station  (EW-14),  at which  the concentrations of
several metals (i.e., antimony, arsenic, copper, lead, zinc) were  5-25 times
higher than  at all other stations  in  the study area.  Chromium  and selenium
were  exceptions,  displaying  maximum  concentrations  at  Stations  NG-15  and
NG-01,  respectively.   Nickel  was  also  an  exception,  displaying  a maximum
concentration  at Station  SR-07.    Chromium,  selenium,  and  nickel  concen-
trations at  these stations were not substantially elevated  relative to their
concentrations at other stations within the study area.

     TBT was  only measured  at  two  stations,  one in the Port Susan reference
area  (Station PS-02)  and  the other  near  the Everett marina  (Station SR-07).
The estimated concentration  of TBT at Station  SR-07 was  elevated above the
single measured  reference concentration  (undetected  at 0.006 mg/kg DW)  by a
factor of 15.

Sediment Metals of Concern--

     Metals  of concern are  metals  that  occurred at concentrations exceeding
those  in  Puget  Sound reference areas.    It  is assumed  that the range of
reference  concentrations  provides  a reasonable  measure  of the possible
variability  of concentrations  in relatively uncontaminated  sediments.

     The range of trace  metal  concentrations  in Puget Sound reference areas
is summarized in  Table 15.   Metal  concentrations  from Port Susan sediments
collected for this  study (Stations PS-02 to PS-04) are  included among the
reference  values summarized  in Table  15.    Metals  concentrations  at   Port
Susan stations  (1986  data)  were within the  ranges  observed for other Puget
Sound reference areas.
                                     97

-------
             TABLE 14.  CONCENTRATIONS OF METALS AND
                 TRIBUTYLTIN  IN  SURFACE  SEDIMENTS
                 OF  EVERETT HARBOR AND PORT  SUSAN

Chemical
Antimony
Arsenic
Cadmi urn
Chromium
Copper
Iron
Lead
Manganese
Mercury
Nickel
Selenium
Silver
Zinc
Range
(mg/kg dry wt)
El. 21
2.62
0.04
51
10.6
16,600
4.4
282
0.006
24.1
U0.20
0.007
38
- E203
- 685
- 7.94
- 271
- 1,010
- 90,600
- 517
- 1,050
- 0.776
- 69a
- 0.58a
- 1.03a
- 5,910
Detection
Frequency
54/54
54/54
54/54
54/54
54/54
54/54
54/54
54/54
54/54
54/54
17/54
54/54
54/54
Location of
Maximum
EW-14
EW-14
EW-14
NG-15
EW-14
EW-14
EW-14
EW-14
EW-14
SR-07
NG-01
EW-14
EW-14
Tributyl tin
U0.006 - 0.093
1/2
SR-07
a Maximum observed concentration in this study does not exceed the
maximum concentration observed among Puget Sound reference areas.
                               98

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               TABLE 15.  SUMMARY OF METAL CONCENTRATIONS  IN  SEDIMENTS
                           FROM PUGET SOUND REFERENCE AREAS

Chemical
Antimony
Arsenic
Cadmium
Chromium
Copper
Lead
Mercury
Nickel
Selenium
Silver
Zinc
Range (mg/kg dry wt)a
U0.1c-2.79 (E1.52C-E2.18)
1.9-17 (6.7-10.1)
0.047-1.9 (0.047-0.082)
9.6-E255 (89-232)
5-74 (13.6-16.7)
UO.1-24 (5.6-10.9)
0.01-0.28 (0.029-0.056)
4-140 (41.3-65)
UO. 1-1.0 (0.27-0.40)
UO.02-3.3 (0.020-0.027)
15-E102 (39.1-51.5)
Detection
Frequency
19/39
41/41
31/31
45/45
35/35
28/35
45/45
33/33
21/31
31/33
33/33
Reference
Sites5
1,2,3,4,7,8,9,10,11
1,2,3,4,7,8,9,10,11
1,2,3,4,6,9,10,11
1-11
1,2,3,4,5,6,9,10,11
1,2,3,4,5,6,9,10,11
1-11
1,2,3,4,5,9,10,11
1,2,3,4,6,9,10,11
1,2,3,4,5,9,10,11
1,2,3,4,5,9,10,11

a The range of  Port  Susan  concentrations from this study  (Stations  PS-02 to PS-04) is
shown in parentheses.

5 Reference sites:   1.  Carr Inlet    5.  Port Madison        9.   Sequim Bay
                     2.  Samish Bay    6.  Port Susan         10.   Port Susan (1985)
                     3.  Dabob Bay     7.  Nisqually Delta    11.   Port Susan (1986)
                     4.  Case Inlet    8.  Hood Canal

c  U = Undetected at the detection limit shown.
   E = Estimated value.

References:

   (Site 1)  Tetra Tech (1985a); Crecelius et al.  (1975)
   (Site 2)  Battelle  (1986)
   (Site 3)  Battelle  (1986)
   (Site 4)  Crecelius et al. (1975); Mai ins et al. (1980)
   (Site 5)  Mai ins et al.  (1980)
   (Site 6)  Mai ins et al.  (1982)
   (Site 7)  Crecelius et al. (1975)
   (Site 8)  Crecelius et al. (1975)
   (Site 9)  Battelle  (1986)
   (Site 10)  PTI and Tetra  Tech (1988)
   (Site 11)  This study.
                                         99

-------
     Eight of  eleven EPA priority  pollutant  metals analyzed  in  this study
had concentrations exceeding the highest Puget  Sound reference concentrations
and are  thus  of concern.   Nickel,  selenium,  and  silver concentrations did
not exceed Puget Sound reference area values, and are thus not considered of
concern in this study.  Chromium will not be considered further because only
one station (NG-15)  had  a chromium   concentration  that exceeded the maximum
Puget Sound reference concentration,  and  it  exceeded  it by only 17 percent.
In addition to the  EPA  priority pollutant metals, TBT exceeded  the single
reference area measurement  at  the single  study area station at which it was
measured.  The limited  number of samples  tested for  TBT does  not allow for
interpretation of spatial distributions.

     A summary of the distributions of the metals of concern is presented in
Table 16.   In  this table,  EAR  are  used to describe chemical distributions.
An EAR is the ratio of the dry weight concentration of a chemical  divided by
the average concentration determined for six Carr Inlet stations (Tetra Tech
1985a).   Threshold  EAR  values  (Table  16)  are  the  EAR equivalent  of  the
maximum  concentration  in Puget Sound  reference  areas.   Thus,  EAR  values
above the  threshold value  indicate exceedance of  the maximum Puget Sound
reference concentration.   The  threshold  EAR  value is  exceeded by  a factor
of 10 only at Station EW-14.  The most elevated concentrations for all metals
of concern were observed  in the East Waterway,  at  Station EW-14 (Table 16).
Also  shown  in  Table  16  is  the  maximum  EAR  excluding Station  EW-14.   With
this station excluded, the maximum concentrations measured in the study area
for metals  of  concern (except  antimony)  were elevated  above  threshold  EAR
values by a factor of less than  4.

     Mean EAR values for metals  of concern in Everett Harbor study areas are
illustrated  in Figure   14.    The  mean  EAR  values for  the  East  Waterway
including Station EW-14 are denoted with a dashed line  (Figure 14).  Cadmium
and mercury concentrations exceeded maximum reference concentrations at only
four  stations,  all  located in  the  East  Waterway  (maximum EAR  values  for
cadmium and mercury  were 8.4 and 19, respectively).   Copper concentrations
exceeded  maximum  reference  concentrations  in  the  East  Waterway  and  at
Station SR-07  in the  Snohomish  River.   Lead  concentrations exceeded maximum
reference concentrations in  the East  Waterway,  at  Station SR-07,  and  at
                                    100

-------
               TABLE 16.  RANGE IN EAR FOR METALS OF CONCERN
               IN SEDIMENTS OF EVERETT HARBOR AND PORT SUSAN


Chemical
Antimony
Arsenic
Cadmium
Chromium
Copper
Lead
Mercury
Zinc


Rangeb
11-1,850
0.78-203
0.04-8.4
3.4-18
1.7-160
0.48-56
0.15-19
2.0-310



(240)
(8.0)
(4.8)
(18)
(15)
(9.6)
(12)
(14)
EAR3

Median
29
• 2.4
0.14
7.3
3.8
1.2
1.2
3.2


Threshold0
25
5.0
2.0
17
12
2.6
7.0
5.4
Areas where Threshold
Exceeded by 10
EW-14
EW-14
—
--
EW-14
EW-14
--
EW-14

Times*"









a Dry-weight  concentration  in study area  sediments  divided by  the average
concentration measured in six Carr Inlet sediments (Tetra Tech 1985a).

b Value in parentheses is the maximum EAR value excluding Station EW-14.

c The threshold EAR is defined as  the ratio of the maximum reference sediment
concentration  in  Puget  Sound divided  by the  average  for  six  Carr  Inlet
reference sediments.  Above  the threshold  EAR,  the dry-weight concentration
of a study area sediment  contaminant would exceed the maximum concentration
reported for any Puget Sound reference site listed in Table 15.

d The contaminant EAR values  for  the listed  stations exceeded the threshold
level by  at  least  one order of magnitude.   The  factor of 10 was arbitrary,
but was useful for  indicating the  areas of greatest contamination.  Sediments
from the underlined stations had the highest  observed concentrations.
                                   101

-------
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                                                                                      LEGEND
                                                                             ' T T1 Includes Station EW14
                                                                              PS
                                                                              NG
                                                                              OG
                                                                              ew
                                                                              so
                                                                              SR
                                                                              ss
                                                                              ES
                                                                                   Excludes Station EW14
                                                                                   Port Susan
                                                                                   Nearshore Port Gardner
                                                                                   Offshore Port Gardner
                                                                                   East Waterway
                                                                                   Snohomisn River Delta
                                                                                  . Snonomisn River
                                                                                   Steamboat Slough
                                                                                   Ebey Slough
                                                                             * THRESHOLD - equivalent to the
                                                                              highest concentration in Puget
                                                                              Sound reference areas.
IT
UI
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 ' 2.  3-
        -«rnBESHO.O*(Pb)

      2 -^ THOESHOIO* (Cd)
UI

UI
                                                       n
                                                                             Reference (mg/kg DW) =. 0.11 (Sb),
                                                                             3.4 (As), 19(Zn).6.4(Cu), 15 (Cr),
                                                                             0.95 (Cd), 9.2 (Pb), and 0.04 (Hg).
         PS
                         NG   OG    EW   SD    SR   SS   ES
                             STUDY  AREA
           Figure  14.   Mean EAR of metals of concern from all study areas.
                                               102

-------
Station ES-01.   Zinc and arsenic  concentrations  exceeded maximum reference
concentrations in  the East Waterway,  at  Station SR-07  and  two other  fine-
grained Snohomish River stations (SR-04 and SR-05), and at Station ES-01.

     Antimony had' the greatest  EAR of all  metals measured in Everett Harbor
study areas.  Mean  EAR  values  for  antimony exceeded threshold  EAR values  in
all  study  areas except Area  NG   (Figure  14).    However,  reported  antimony
concentrations may  be  overestimates  by  a factor  of 5  and were  thus not
considered appropriate  for  problem identification and ranking  (see  Sediment
Chemistry.  Quality Assurance/Quality  Control  Results in  Methods section).
Antimony data are presented in Figure 14 for comparative purposes.

Sediment Chemistry:  Organic Compounds

     The  concentration  ranges  (ug/kg  DW)   and  detection   frequencies   of
semi volatile  and  volatile organic  compounds  detected at least  once in the
study  area  are  presented in  Table 17.  Among  those  organic compounds with
the highest detection frequencies  and reported at the highest concentrations
were  4-methylphenol,  dehydroabietic  and  abietic  acids  (among  other  resin
acids), PAH  (naphtha-lene  in particular),  and several  tentatively identified
compounds  (most  notably, a diterpenoid hydrocarbon,  possibly  dehydroabie-
tane).   Maximum  concentrations  of  all   EPA  priority  pollutant PAH, all
measured resin acids,  phenol  and  all  alkyl-substituted phenols, all  chlori-
nated phenols, all  chlorinated  guaiacols,  PCBs,  most  TIO compounds,  and all
detected volatile  organic compounds  occurred  in  the East Waterway, as did
the maximum concentrations of most  metals of concern  (Table  17).  Within the
East Waterway, maximum concentrations of a number of compounds were  observed
at  Stations  EW-01   (particularly  chlorinated phenols  and  guaiacols),  EW-04
(including  certain  resin  acids,   certain  phenols,  most TIO compounds, and
PCBs),  EW-07  (most notably 4-methylphenol  and  naphthalene), EW-13  (certain
resin acids), and  EW-14  (especially  PAH  and benzoic  acid).  Structures  of
some  of the compounds  listed  in Table 17 are depicted  in Figure 15.  Note
that  some  TIO compounds  were  identified  by mass  spectral   characteristics
(e.g., base  peak  m/z 181)  or structural  characteristics  deduced from mass
spectra (e.g., compound class); these  compounds  will be  described  in more
detail later in this section.
                                    103

-------
TABLE 17.   CONCENTRATIONS OF  DETECTED SEMIVOLATILE AND
   VOLATILE ORGANIC COMPOUNDS IN SURFACE SEDIMENTS
          OF EVERETT HARBOR AND PORT SUSANa
Chemical
LPAH
naphthalene
acenaphthylene
acenaphthene
f 1 uorene
phenanthrene
anthracene
HPAH
fl uoranthene
pyrene
• benz(a)anthracene
chrysene
benzof 1 uoranthenes
benzo( a) pyrene
i ndeno ( 1 , 2 , 3 -c , d ) pyrene
di benzo(a,h)anthracene
benzo ( g , h , i } pery 1 ene
Total PCBs
Resin Acids
abietic acid
dehydroabi'etic acid
12-chlorodehydroabietic acid
14-chlorodehydroabietic acid
dichlorodehydroabietic acid
isopimaric acid
neoabietic acid
sandaracopimaric acid
Phenols and Guaiacols
phenol
2-methyl phenol
4-methyl phenol
2, 4-di methyl phenol
2-chlorophenol
2,4-dichlorophenol
2 . 4 , 6-tri chl orophenol
2,4,5-trichlorophenol
2,3,4, 6-tetrachl orophenol
pentachl orophenol
3,4, 5-trichloroguaiacol
4,5,6-trichloroguaiacol
tetrachloroguaiacol
Chlorinated Benzenes
1 , 2-di chl orobenzene
1 , 4-di chl orobenzene
Phthalates
dimethyl phthalate
di ethyl phthalate
di-n-butyl phthalate
butyl benzyl phthalate
bis(2-ethylhexyl Iphthalate
di-n-octyl phthalate
Range .
(ug/kg dry wt)°
L36 28,000
B3 X17.000
1 800
2 - 5,200
6 - 4,300
3 - 8,100
1 6,100
L36 - 23,000
3 3,700
3 - 5,500
1 3,200
1 3,200
5 4,100
1 1,700
1 730
2 270
3 550
Ul - E9.600

U130 98,000
E20 83,000
£61 11,000
E46 3,400
U130 E710
E85 £11,000
E79 El 4, 000
E17 14,000

11 2,900
6 1,200
3 X98.000
U10 520
El 160
2 320
U2 290
El 120
U2 120
U2 E460
El 110
U2 48
U2 50

7 96
2 25C

8 26°
3 - llc
BIO 260C
U10 70
BIO 930
B3 4C
Detection
Frequency
54/54
46/54
41/54
45/54
24/54
50/54
51/54
54/54
53/54
49/54
54/54
54/54
48/54
50/54
42/54
29/54
46/54
7/54

21/31
29/31
19/31
10/31
5/31
20/31
8/31
21/31

49/54
3/54
50/54
2/54
11/60
21/60
22/60
18/60
6/31
22/60
11/31
6/31
4/31

4/54
14/54

2/54
5/54
20/54
6/54
39/54
3/54
Location of
Maximum
EW-14
EW-07
EW-14
EW-14
EW-14
EW-04
EW-14
EW-14
EW-13
EW-14
EW-14
EW-14
EW-14
EW-14
EW-14
EW-14
EW-14
EW-04

EW-13
EW-04
EW-04
EW-04
EW-04
EW-13
EW-13
EW-01

EW-10
EW-04
EW-07
EW-04
EW-04
EW-01
EW-01
EW-02
EW-01
EW-04
EW-01
EW-01
EW-01

EW-04
OG-02

NG-02
NG-02, SD-03
EW-13
EW-01
EW-14
SR-02, SR-03
                     104

-------
TABLE 17.   (Continued)
       Chemical
     Range
(ug/kg dry wt)b
               Detection
               Frequency
                                                                                Location of
                                                                                  Maximum
Pesticides

   lindane (gamma-HCH)
   p,p'-DDT

Nitrogen-Containing Compounds
   N-ni trosodi phenylami ne

Miscellaneous Extractables and
Tentatively Identified Compounds

   benzyl  alcohol
   benzoic acid
   dibenzofuran
   2-methylnaphthalene
   1-methylpyrene
U0.5   lc
  Ul   23
   8   57
   retene
         a "
 U10
 E10
   3
   2
   U
   U
810
5,900
5,000
7,400
E240
E3.100
                  1/54
                  1/54
                 13/54
 6/54
25/54
44/54
38/54
25/54
44/54
                 NG-04
                 SD-03
                 EW-01
EW-04
EW-14
EW-14
EW-07
NG-11
EW-04
cymene (unspecified isomer)
di benzothi ophene ,
l,2,4-trithiolaned
diterpenoid hydrocarbon
(base peak 255)
diterpenoid alcohol
(base peak 271)
hexadecanoic acid
hexadecanoic acid methyl ester*:
hexadecenoic, acid methyl ester
cholesterol IJ
campesterol
alkanol (unidentified).01
base peak 181, isomer #1^
base peak 181, isomer #2
U
U
U
U

U

U -
U
U
U
U
U
U
U
E2.900
E280
E5,800
E23,000

E8.600

E2.300
E4.300
£3,200
E630
El, 100
E2,200
£12,000
£6,500
41/54
19/54
31/54
41/54

42/54

27/54
53/54
53/54
51/54
20/54
43/54
44/54
45/54
EW-04
EW-14
EW-04
EW-04

EW-11

EW-10
EW-04
EW-04
EW-04
EW-04
EW-04
EW-04
EW-04
Volatile Organic Compounds
acetone
ethyl benzene
total xylenes

U6
U3
U3

230
E5C
39

4/19
2/19
4/19

EW-05
EW-09
EW-08
a Qualifiers:

  U   Substance undetected at the detection limit shown.
  B - Blank corrected down to the detection limit shown.
  X   The surrogate recovery for  this  compound  was  low (<10 percent).   Hence,  the recovery
      correction was at least a factor of 10.
  L   "Less  than"     the reported  concentration is  the mean  of a detected  value and  a
      detection limit or, for PAH sums, the sum includes  detection limits.
  E = Estimated value.

  Maximum is the highest detected value even if maximum detection limits were higher.

c Maximum concentration does not exceed Puget  Sound  reference area concentrations.

  Tentatively  identified organic  (TIO) compound   detection limits for  TIO  compounds  were
not assigned.
                                        105

-------
        OOOH


    DEHYDROABIETIC ACID
                                   COOH

                                 NEOABIETIC ACID
  DEHYDROABIETANE '
(a diterpenoid hydrocarbon)
                                     TOTAROL*
                                (a diterpenoid alcohol)
                                    RETENE'
        COOH
  CHLORODEH YDROABIET1C
    ACID (12-or 14-chloro-)
                                    COOH
OICHLORODEHYDROABIETIC
          ACID
                                                      3 TIO (tentatively identified
                                                       organic compound) - (he
                                                       identity ot these compounds
                                                       was not confirmed with
                                                       authentic standards during
                                                       analysis.  Dehydroabietane
                                                       and totarol are proposed
                                                       as possible identities based
                                                       upon mass spectral
                                                       characteristics, but  other
                                                       diterpenoid hydrocarbons/
                                                       alcohols are possible.
           COOH

      ISOPIMARIC ACID
         COOH


 SANDARACOPIMARIC ACID
                OCH3
  CHLORINATED GUAIACOLS
       3,4,5-trichloro-
       4,5,6-trichlorc-
       tetrachloro-
 CHLORINATED PHENOLS
     2-chloro-
     2.4-dicnloro-
     2,4,6-lrichloro-
     2,4,5-lrichioro-
     2,3,4,6-tetrachloro-
     pentachloro-
Figure 15.  Structures of selected organic  compounds  observed
               in  sediments.
                                     106

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     Several  semi volatile  organic  compounds  were  detected  infrequently
(three  or   fewer  times),   including  2-methylphenol,   2,4-dimethylphenol,
dimethyl phthalate, di-n-octyl  phthalate,  lindane,  and  p,p'-DDT.   The three
detected volatile organic compounds were detected four or fewer times.

     Semi volatile organic compounds  that were searched  for but not detected
in  any samples   included  all   halogenated  ethers,   all  nitrogen-containing
compounds   other  than   N-nitrosodiphenylamine,   1,3-dichlorobenzene,  1,2,4-
trichlorobenzene,  hexachlorobenzene,  2-chloronaphthalene,  hexachlorobuta-
diene, hexachloroethane, hexachlorocyclopentadiene,  4-chloro-3-methylphenol,
and isophorone (see Tables 1 and 17).  Most target chlorinated pesticides and
volatile organic  compounds were not detected  (see Tables 1 and 17).

Organic Compounds of Concern--

     As described for metals,  chemicals of  concern  are  those chemicals that
occur  at concentrations  exceeding  the  range  of Puget Sound reference areas.
The range" of concentrations of  organic  comprounds in Puget  Sound reference
areas  are  summarized  in Table  18.   Concentrations  in  Port  Susan sediments
analyzed for this study  (Stations  PS-02 to  PS-04)  are included in Table 18.
Port Susan concentrations were typically well within the range of concentra-
tions  for  other  Puget Sound  reference  areas,  although the maximum 4-methyl-
phenol concentration in  Port Susan (290 ug/kg DW) (this study) was consider-
ably  higher than the  maximum  value  reported in Carr  Inlet  (32  ug/kg  DW)
(Tetra Tech 1985a).

     Organic compounds that did not exceed the range  of  Puget Sound reference
concentrations in this  study were  1,4-dichlorobenzene,  dimethyl  phthalate,
diethyl phthalate,  di-n-butyl  phthalate,  di-n-octyl  phthalate, lindane,  and
ethylbenzene  (Tables 17  and 18).   These compounds  are thus  of  relatively
minor concern and will  not be discussed further.

     Distributions of contaminants of concern are summarized in terms of EAR
values  in  Table  19.  Summaries of distributions of organic chemicals with
EAR >1,000 are presented in Table 20.  The distributions of organic chemicals
of concern are summarized below.
                                    107

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TABLE 18.   SUMMARY  OF ORGANIC COMPOUND CONCENTRATIONS
    IN SEDIMENTS FROM PUGET SOUND REFERENCE  AREAS3
Chemical
LPAH
naphthalene
acenaphthylene
acenaphthene
fl uorene
phenanthrene
anthracene
HPAH
fluoranthene
pyrene
benz(a)anthracene
chrysene
benzo(b)fl uoranthene
benzo(k)fl uoranthene
benzo( a) pyrene
i ndeno ( 1 , 2 , 3-c , d ) pyrene
di benzo(a, hjanthracene
benzo(g,h,i jperylene
Total PCBs
Resin Acids
abietic acid
dehydroabietic acid
12-chlorodehydroabietic acid
14-chlorodehydroabietic acid
dichlorodehydroabietic acid
isopimaric acid
neoabietic acid
sandaracopimaric acid
Phenols and Guaiacols
phenol
2-methyl phenol
4-methyl phenol
2, 4-di methyl phenol
2-chlorophenol
2,4-dichlorophenol
2,4,6-tnchlorophenol
2,4,5-trichlorophenol
2,3,4, 6-tetrachl orophenol
pentachlorophenol
3,4, 5-trichloroguaiacol
4,5,6-trichloroguaiacol
tetrachloroguaiacol
Chlorinated Benzenes
1 , 4-di chl orobenzene
1,2-dichlorobenzene
Phthalate Esters
dimethyl phthalate
di ethyl phthalate
di-n-butyl phthalate
butyl benzyl phthalate
bi s( 2-ethyl hexyl Jphthal ate
di-n-octyl phthalate
. I
Range (ug/kg dry wt)D f
4-L71 (L36-L42)
U0.5-U40 (B3-U10)
U0.1-U40 (1-U10)
U0.1-U40 (U10)
UO.1-40 (U10)
4-170 (4-7)
U0.5-U40 (1-2)
34-L100 (L36-L48)
5-100 (5-7)
5-120 (5-7)
2-U40 (2-3)
4-U40 (4-5)
U5-94
E4.8-94
UO. 37-40 (1-3)
UO. 37-30 (1-U10)
U0.4-E10 (2-U10)
El. 2-20 (3-4)
3.1-U50d (U50)

U130-U180
E20-U130
U130-U180
U130-U180
U130-U180
U130-U180'
U130-U180
U130-U180

UO.5-626 (Z100-Z200)
U0.7-U50 (U20-U50)
UO. 8-290 (84-290)
U1-U14 (U10)
U0.5-U9.4 (U3)
U0.5-U43 (U3)
U0.5-U38 (E2-L3)
U3-U37 (U3-L3)
U3
0.1-U50d (U3)
U3
U3
U3

U0.06-U40d (U10)
U0.06-U40d (U10)

U0.5-U50 (U10)
4-18 (U10),
U20-760 (BIO)1"
U0.5-U25 (U10)
U0.5-U25 (B10-Z58)T
U0.5-E56 (B3-U10)
Jetectlon
:requency
13/13
12/27
2/27
4/27
7/28
18/24
11/24
13/13
24/29
23/29
15/24
15/24
15/25
15/25
16/21
10/19
3/12
8/13
7/22

0/3
2/3
0/3
0/3
0/3
0/3
0/3
0/3

5/17
0/11
7/11
0/13
0/13
0/13
2/13
1/11
0/3
1/10
0/3
0/3
0/3

1/23
1/22

1/12
4/8
3/5
3/12
0/5
4/12
Reference
Sites0
1,8,9
1,2,3,4,5,6,8,9
1,2,3,4,5,6,8,9
1,2,3,4,5,6,8,9
All
1,2,3,6,7,8,9
1,2,3,6,7,8,9
1,8,9
All
All
1,2,3,6,7,8,9
1,2,3,6,7,8,9
1,2,3,4,5,6,7,8
1,2,3,4,5,6,7,8
1,3,4,5,6,7,8,9
1,4,5,6,7,8,9
1,8,9
1,7,8,9
1,2,3,4,6,7,9

9
9
9
•9
9
9
9
9

1,2,3,8
--
1,8,9
1,8,9
1,8,9
1,8,9
1,8,9
1,8,9
9
1,8,9
9
9
9

1,2,3,4,5,8,9
1,2,3,4,5,8,9

1,8,9
1,9
1
1,8,9
1
1,8,9
                     108

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TABLE 18.  (Continued)
       Chemical
                  Range (ug/kg dry wt)
                                                                Detection
                                                                Frequency
                                                                               Reference
                                                                                 Sites0
Pesticides
   p,p'-ODT9
   lindane (gamma-HCH)

Miscellaneous Extractables

   benzyl alcohol
   benzoic acid
   di benzofuran
   2-methylnaphtha! ene
   1-methylpyrene
   retene!'
   cymene          .
   di benzothi ophene .
   1,2,4-trithiolane"     .
   diterpenoid hydrocarbon
   diterpenoid alcohol
   hexadecanoic acid
   hexadecanoic acid methyl
     ester
          ,n
   hexadecenoic acid methyl
     ester"
   cholesterol!]
   campesterol
   alkanol"
   base peak 181,  isomer #lP
   base peak 181,  isomer #2

Nitrogen-Containing Compounds
   N-ni trosodi phenylami ne

Volatile Organic Compounds
   acetone
   ethyl benzene
   total xylenes
                    U1.0-U10 (U1-U10)           0/12
                    U0.5-U50 (U0.5-U50)          0/9
                   U3.4-U20*3 (U20-U200)          0/6
                   U7.2-430d (E10-U100)          4/6
                      U5-E14 (U10-11)           4/11
                    E0.3-U22 (2-U10)           10/17
                           U                    0/3
                      U-E130 (U-1.6)            8/13
                        U-12                    1/4
                           U                    0/3
                           U                    0/3
                           U                    0/3
                   E1.2-E3.;                    3/3
                       U-E35                    1/3

                   E380-E480                    3/3

                   E330-E380                    3/3
                     E19-E37                    3/3
                           U                    0/3
                           U                    0/3
                           U                    0/3
                           U                    0/3
                                        U0.5-U10 (U10)              0/8
                                              U6                    0/3
                                          U3-U16 (U3)              0/11
                                              U3                    0/3
                                                                                 1,8,9
                                                                                 1,8,9
                                                                                  1,9
                                                                                 1,8,9
                                                                                 1,8,9
                                                                               ,4,5,6,8,9
                                                                                   9
                                                                                 1,8,9
                                                                                  1,9
                                                                                   9
                                                                                   9
                                                                                   9
                                                                                   9
                                                                                   9
                                                              1,9
                                                               9
                                                             2,3,9
                                                               9
a This table includes only chemicals that were detected in the present study.

Qual i fiers:

  L = "Less  than"    the  reported  concentration  is  the mean  of a  detected value  and a
      detection limit or, for PAH sums, the sum includes detection limits.
  U = Undetected at the detection limit shown.
  E = Estimated value.
  8 = Blank-corrected down to the detection limit shown.
  Z = Value is blank-corrected but exceeds detection limit.

  The range of Port Susan concentrations from this study (Stations PS-02, PS-03, and PS-04)
is  in parentheses.
c Reference sites:
1. Carr Inlet
2. Samish Bay
3. Oabob Bay
                                        4. Case Inlet
                                        5. Port Madison
                                        6. Port Susan
                                                            7.  Nisqually Delta
                                                            8.  Port Susan (1985)
                                                            9.  Port    Susan    (1986, this
                                                               study)
   Detection  limits for this  chemical  or chemical group  that exceeded 50  ug/kg  have been
excluded  for  the purpose of  reference area comparisons;  this is  consistent with treatment
of reference area data in Tetra Tech (1985a).

e  An anomalously  high  phenol  value  of  1,800  ug/kg dry  wt  was found  at one  Carr Inlet
station  (Tetra  Tech  1985a).   For the purpose of  reference area  comparison,  this value has
been excluded.  Data from Port Susan (this study) were excluded because laboratory contami-
nation of phenol was observed during analysis of these reference area samples.
                                        109

-------
TABLE 18.  (Continued)
  Data  from  Port  Susan (this study)  were excluded because laboratory contamination of this
phthalate was observed during analysis of these reference area samples.

9 Higher  detection  limits  for single  component  pesticides  (U25)  were  reported  for  Main
Sediment  Quality  Survey samples  from Carr  Inlet  in Tetra  Tech  (1985a).   However,  these
detection limits were  based  on GC/MS analysis,  which is less sensitive  than GC/ECD and was
considered undesirable  for characterizing  reference  areas.   GC/ECD analyses for Carr Inlet
samples in the Preliminary Survey (Tetra Tech 1985a)  were consistent with the  U10 value.

   Tentatively  identified  organic  compound.   Detection  limits   were   not  assigned  when
tentatively  identified compounds  were not  found during  mass spectral  searches of reference
sample extracts.

References:

(Site 1) Tetra Tech  (1985a);  Mowrer et al.  (1977)
(Site 2) Battelle (1986)
(Site 3) Battene (1986); Prahl and Carpenter (1979)
(Site 4) Mai ins et al.   (1980); Mowrer et al.  (1977)
(Site 5) Malins et al.   (1980)
(Site 6) Malins et al.   (1982)
(Site 7) Barrick and Prahl (1987); Mowrer et al. (1977)
(Site 8) PTI and Tetra Tech  (1988); Stations PS-01 through PS-04
(Site 9) This study.
                                         110

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                      TABLE 19.  RANGE"IN EAR FOR ORGANIC COMPOUNDS OF CONCERN
                           IN SEDIMENTS OF EVERETT HARBOR AND PORT SUSANa
Chemical
LPAH
HPAH
Total PCBs
Resin Acids
abietic acid
dehydroabietic acid
12-chlorodehydroabietic acid
14-chlorodehydroabietic acid
dichlorodehydroabietic acid
isopimaric acid
neoabietic acid
sandaracopimaric acid
Phenols and Guaiacols
phenol
2-methyl phenol
4-methyl phenol
2, 4-di methyl phenol
2-chlorophenol
2,4-dichlorophenol
2,4,6-trichlorophenol
2 , 4 , 5-tri chl orophenol
2,3,4, 6-tetrachl orophenol
pentachl orophenol
3,4,5-trichloroguaiacol
4, 5,6-trichloroguaiacol
tetrachloroguaiacol


Range
0.88
0.46
0.17

0.87
0.32
0.41
0.31
0.87
0.57
0.53
0.12

0.33
0.86
0.23
1.5
0.29
0.29
0.29
0.1
0.67
0.06
0.33
0.67
0.67
690
290
1,600

650
1,300
73
23
4.7
73
93
95

88
170
7,500
76
46
47
43
12
40
14
37
16
17
EARb
Median0
6.4
4.1
0.83

15
22
5.2
4.0
4.0
6.2
2.7
6.4

6.8
7.1
57
7.3
5.7
2.9
2.9
1.7
1.3
0.6
1.3
1.5
1.3

Threshol dd
1.7
1.3
8.3

1.2
2.1
1.2
1.2
1.2
1.2
1.2
1.2

1.9
7.1
22
2.1
2.7
6.3
5.6
3.7.
1.0
1.5
1.0
1.0
1.0
Areas where Threshold
Exceeded by 10 Times6
EH.NG.OG, SR
Si.NG, SR
EW.NG

EW,SR
fW.OG.SR
si
EW
—
EW
EW
EW

ES,EW,NG
EW
EW.NG
EW
EW
--
--
--
EJi
--
EW
EW.SS
EW
Chlorinated Benzenes
  1,2-dichlorobenzene

Phthalate Esters
  butyl  benzyl  phthalate
  bis(2-ethylhexylJphthalate

Pesticides
  p,p'-OOT

Miscellaneous Extractables and
Tentatively Identified Compounds
  benzyl  alcohol
  benzoic acid
  dibenzofuran
  2-methylnaphthal ene
  1-methylpyrene
  retene
  cymene (unspecified isomer)
  dibenzothiophene
  1,2,4-trithiolane
  di terpenoi d hydrocarbon
    (base peak 255)
  diterpenoid alcohol
    (base peak 271)
  hexadecanoic acid
 2.0   27
0.59   4.2
0.60   55
 0.1   2.3
 1.0
0.07
0.82
0.54.
81
41
1,400
2,000
12
120
240
14
290
1,200
  UT   4,300

  Uf   66
           2.9
           0.6
           2.2
           0.1
 2.0
 0.7
 4.8
 5.5
 0.3
0.84
 1.3
 0.7
 2.7
 2.3

 9.3

 5.1
              11
             1.5
             1.5
             1.0
2.0
3.0
3.8
6.0
1.0
4.8
1.0
1.0
1.0
1.0

1.6

1.0
                    EW
      EW
      EW
     EW.NG
     EW.NG
      NG
      EW
   EW,NG,OG
      QL
      EW
     EW,OG

ES,EW.,NG,SR,SS

   EW,NG,OG
                                            111

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TABLE 19.  (Continued)
Chemical

Range
EARb
Medianc

Threshold*1 Exceeded by 10 Times6
Miscellaneous Extractables and
Tentatively ^Identified Compounds (Continued)
  hexadecanoic acid methyl ester
  hexadecenoic acid methyl ester
  cholesterol
  campesterol
  alkanol (unidentified)
  base peak 181, isomer #1
  base peak 181, isomer #2

Nitrogen-Containing Compounds

  N-m trosodi phenylami ne
Volatile Organic Compounds
9.9
9.2
22
55
110
600
330
2.0   14
                 1.0
                 0.9
                 1.9
                 3.4
                  14
                 7.0
                 3.5
2.4
            1.1
            1.1
            1.6
            1.0
            1.0
            1.0
            1.0
                             2.4
     EW
     EW
 All  (EW)
EW,OG,SD,SR
 EW.OG.SR
 ES,EW,NG,
 OG,SD,SS
acetone
total xylenes
1 38
1 13
1.7
1.7
1.0
1.0
EW
EW
a  Only  chemicals with  concentrations exceeding  Puget  Sound reference area  levels  in at least  one
sample are included in this table.

   Dry weight  concentration  in study area sediments divided by the average concentration measured  in
six Carr Inlet samples (Tetra Tech 1985a).  For chemicals not measured in  Tetra Tech  (1985a),  such  as
resin acids,  most TIO  compounds,  and chlorinated guaiacols,  data from Port Susan were  used.   For  TIO
compounds- that  were  undetected  in  Port Susan,  no  detection limits  were available.    In order  to
generate EAR  values for such  compourTds,  a  reference concentration  of 20  ug/kg OW was assigned as  a
reasonable detection  limit  (i.e., twice the detection limit  for many  semivolatile organic compounds
in Port Susan).

c  Medians  are  based  on  data  after  exclusion of detection  limits  >100  ug/kg  DW for  semivolatile
organic compounds and >25 ug/kg OW for pesticides.

   The threshold  EAR is defined as the ratio of the maximum reference sediment concentration  in  Puget
Sound  divided by the  average  for  sediments  in  Carr Inlet   (Tetra  Tech  1985a)  or  Port  Susan  (see
footnote b).  Above the threshold EAR, the dry weight concentration  of a study area sediment  contami-
nant  would exceed  the  maximum  concentration- (or  detection limit)  reported for any  Puget  Sound
reference site listed in Table  18.

e  The contaminant  EAR  in  sediments  from  at  least one  station  in each listed area exceeded  the
threshold level by at least one order of magnitude.  The factor of 10 is arbitrary,  but is  useful  for
indicating the  areas  of greatest contamination.   It was not used in  problem  area  identification  or
ranking.   Sediments in the underlined areas had the highest observed  concentrations.

   Detection limi.ts are not reported for TIO compounds.  Hence, the lower end  of the range is  unknown.
                                              112

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             TABLE 20.  SUMMARY OF ORGANIC COMPOUNDS
                        WITH  EAR >l,000a
       Compound                               Station
Naphthalene                          EW-04,  EW-07,  EW-13,  EW-14
2-Methylnaphthalene                  EW-04,  EW-07,  EW-13,  EW-14
Acenaphthene                                   EW-14
Fluorene                                       EW-14
Dibenzofuran                                   EW-14
Dehydroabietic acid                         EW-04,  EW-13
4-Methylphenol                   EW-04, EW-07, EW-10, EW-13, EW-14
PCBs                                           EW-04
a  TIO  compounds  are  not  included  in this  table because  of the
uncertainty of reference conditions for certain compounds.
                               113

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     Polvcvclic  Aromatic Hvdrocarbons.--To  facilitate data  analysis and  to
maximize  comparability with  data analyses  performed in  other Puget  Sound
studies,  the  16 individual  EPA  priority pollutant  PAH  were treated as  two
groups:   LPAH and  HPAH.   This  grouping was considered  to  be a  reasonable
data reduction  method  because  the concentrations of individual  PAH within
each group  tended  to correlate  well.   Pearson  correlation coefficients  (r)
among  the six  LPAH (using dry  weight  concentrations)  ranged  from 0.62  to
>0.99  with  most values  exceeding 0.8 (Appendix  C).   Correlations  of  naph-
thalene with other  LPAH were typically the  least  strong.   Correlations  among
HPAH were strong overall, with correlation  coefficients  ranging from 0.79  to
>0.995  with  most values  exceeding 0.9.   Grouping of LPAH and HPAH is also
valuable for potential source correlations,  as relatively high concentrations
of LPAH  are typically characteristic of petroleum-derived materials whereas
relatively high concentrations of HPAH are more  characteristic  of combustion-
derived  materials   (e.g.,  Readman et  al.   1982;  Prahl  and  Carpenter  1983;
Tetra  Tech 1985a).

     Mean EAR for LPAH  and HPAH  were'higher  in  the East  Waterway than in any
other  study area,  and LPAH  were considerably more elevated than HPAH in the
East Waterway  (Figure 16).   The mean  EAR for LPAH in the East Waterway was
roughly 310 whereas mean  EAR in  other  study  areas were less than 20.  Within
the East Waterway,  LPAH concentrations exceeding  EAR  of  500 were observed  in
two  areas  along  the  east  shore  (Stations EW-04   and  EW-07, 25,000 and
23,000 ug/kg  DW;  and Stations EW-13 and EW-14,  24,000 and 28,000 ug/kg DW,
respectively)  (Figure  17).    Concentrations  were  considerably   lower   at
stations  on  either side  of  these two maxima,  but  EAR for LPAH nonetheless
exceeded  100  at Stations EW-10  and EW-15  (Figure  17).    PAH concentrations
were lower  (EAR=59 for  LPAH)  at  Station EW-11 near the  west  shore of the
East Waterway  (note  that PAH  were not analyzed in  Samples  EW-02, EW-03,
EW-05,   EW-06,  EW-08,  and EW-09  because  of  the  availability of recent  data;
Figure 17).

     The  PAH  composition  in   East  Waterway   sediments  was  variable, but
certain  trends  were apparent.    LPAH  concentrations  throughout  the  East
Waterway were  comparable to or  greater  than HPAH concentrations  (LPAH/HPAH
ratios  ranged  from 0.7 to 4.2 with  a mean   of  1.8;  n=9) (Figure  17).  Such
                                     114

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                                                                                             HPAH
                                               Port Susan
                                               Nearshore Port Gardner
                                               Offshore Port Gardner
                                               East Waterway
                                               Snohomish Delta
                                               Snohomish River
                                               Steamboat Slough
                                               Ebey Slough
                                                                                       ' THRESHOLD - equivalent to the
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                                                                                       Sound reference areas.
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                                      OG
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                                           AREAS
                                                                          Relerence: L41 (ig/kg DW (LPAH) and L79 (ig/kg DW (HPAH).
        Figure 16.  Mean EAR of LPAH and HPAH in sediments from all study areas.

-------
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Figure 17.  EAR of LPAH and HPAH at individual stations in the
              East Waterway.
                                 116

-------
PAH compositions suggest a source other than combustion of organic material.
Naphthalene was  the predominant PAH  compound  in all  East  Waterway  samples
except Station  EW-01,  where  fluoranthene and pyrene concentrations  slightly
exceeded the naphthalene concentration.  Naphthalene concentrations  exceeded
EAR of  1,000  at Stations EW-07  (17,000  ug/kg  DW),  EW-13 (12,000 ug/kg  DW),
EW-04 (10,000 ug/kg  DW),  and EW-14  (7,000 ug/kg.DW) and roughly equalled or
exceeded  EAR of 100  at the remaining  East  Waterway  stations  that  were
analyzed for  PAH.    Notably,  PAH assemblages dominated  by  naphthalene  were
also observed in sediments near  a  pulp mill in Commencement Bay (Tetra  Tech
1985a).

     Outside of  the  East  Waterway,  PAH concentrations  were most elevated in
Areas OG  and  NG (Figure  16).   PAH concentrations throughout  Area OG  were
consistent among stations (LPAH = 750+150 ug/kg DW; HPAH = 640+180 ug/kg DW,
n=7).  All OG samples had very similar PAH compositions; naphthalene was the
predominant  PAH  compound in  all  samples  (as was  observed  in  East  Waterway
sediments).   The  LPAH  concentration  at  Station   OG-01  (nearest  the  East
Waterway) was at least 5 times lower them concentrations at the nearest  East
Waterway  stations   (e.g.,  Station  EW-15)  but  was  more than  4  times  the
concentration at intervening  Station NG-01.  Thus,   based on the limited  data
available, a gradient indicating LPAH transport out of the East Waterway was
not apparent.

     In Area NG, PAH concentrations were most elevated at Stations NG-09 and
NG-11, and to a  lesser extent, Station NG-10.  PAH  contamination at  Stations
NG-09  and  NG-11 was  similar  in   terms  of  composition and  concentration
(3,500-4,100 ug/kg DW of LPAH and 8,700-9,000 ug/kg DW  for HPAH).  Concentra-
tions were roughly 3 times lower at Station NG-10 than at Stations NG-09 and
NG-11, and  at  least an order of magnitude  lower at other NG stations.  PAH
compositions in Area NG were  unlike those in Areas  EW and OG, and had higher
relative proportions of HPAH  (e.g., fluoranthene, pyrene, and chrysene).

     Polvchlorinated  Biphenvls--PCBs  were   seldom  detected  in this study
(detection frequency =  7/54) and occurred  at concentrations  above  50 ug/kg
DW  (the  maximum  reference  area detection  limit)  in  only three  samples.
Sample EW-04  in the  East Waterway  had  a  highly  elevated  concentration of
                                    117

-------
PCBs  (9,600  ug/kg DW;  EAR=1,600).   PCBs were detected  at  a far lower con-
centration at  adjacent Station  EW-07  (87  ug/kg DW)  and were undetected at
all other  EW  stations at detection  limits of  50  ug/kg  DW or less.   In Area
NG,  Sample  NG-09  had  a   reported  PCB  concentration  of  5,500  ug/kg  DW
(EAR=920).  PCBs  were undetected at  detection  limits of 50  ug/kg DW or less
at nearby NG stations.

     Resin Acids—The resin  acids  analyzed  for this  study include abietic
acid,  dehydroabietic  acid  (DHA), isopimaric  acid,  neoabietic acid,  sandara-
copimaric  acid,  12- and 14-chlorodehydroabietic  acid,  and  dichlorodehydro-
abietic acid  (see Figure 15 for structures).  Unchlorinated resin  acids (or
tricyclic  diterpenoid  acids)  are   among  the  predominant  constituents  of
higher plant  resins and supportive  tissue,  particularly in conifers (e.g.,
Simoneit 1986; Thomas  1970; Gough 1964).  Dehydroabietic acid, typically the
predominant resin acid found in the  environment, is derived  from abietic acid
and is relatively stable as  a  result  of its aromatic ring  structure (e.g.,
Simoneit  1986).   Although  unchfarinated resin  acids are naturally-occurring
compounds, they are highly  concentrated by  pulping processes. The occurrence
of resin  acids,  particularly  DHA and abietic acid,  has been well-documented
in sulfite pulp  effluents  (e.g., Leuenberger et al.  1985; Leach and Thakore
1977)  and  in  kraft effluents (e.g., Leach  and Thakore  1973,  1977).   Resin
acids  (e.g.,  DHA)  have also  been   reported at elevated  concentrations  in
sediments  near  pulp mill discharges (e.g.,  Brownlee et  al.  1977).  DHA is
very  persistent  in sediments (a "half-life" of over 20 yr was estimated in
                                             210
Lake Superior sediments that  were dated with    Pb)   (Brownlee et al. 1977).

     Chlorine  bleaching  processes   used by the  pulp  industry have  been
demonstrated  to  result in  the  formation of chlorinated  resin  acids (i.e.,
chlorinated  DHA  derivatives)   in   bleached  sulfite  and   kraft   effluents
(Leuenberger et al. 1985; Claeys et  al.  1980; Leach  and Thakore 1975, 1977).
Chlorinated derivatives of  DHA  are  by  far  the  predominant chlorinated resin
acids reported  in bleached  pulp effluents,  presumably because the  stability
of  DHA  relative  to  other  resin  acids enables  it  to survive  the strong
oxidizing  conditions  of  chlorine   bleaching.    Chlorinated  resin  acids,
because of their  unique origin, are  powerful  geochemical  tracers of  pulp
mills   that  use  chlorine   bleaching  processes.     Many  other  chlorinated
                                    118

-------
compounds  can  be produced  by pulp  mills,  including many  acid and  neutral
semi volatile organic  compounds (e.g., Carl berg  et  al.  1986; Leuenberger  et
al. 1985; Kringstad and Lindstrom 1984; Claeys et al. 1980)  as. well  as  high-
relative-molecular-mass  organic  material   (M^l.OOO)   of  poorly   defined
structure.  This  latter material  can constitute the majority of organically
bound chlorine in spent chlorination and  alkali  extraction  liquors  from the
bleaching of softwood  kraft pulp (e.g.,  Kringstad  and  Lindstrom 1984), but
is not amenable to typical GC/MS analysis.

     Concentrations  of all   resin  acids  were  most elevated  in  the  East
Waterway.   Mean  EAR values  for DMA  and  abietic acid,  which  were  the most
concentrated and  among the most  frequently  detected resin  acids,  were 310
and  120,  respectively, in  the East  Waterway  (Figure  18).   These  mean EAR
were over 13 times higher than those  of other study  areas  (note that  samples
in Areas  NG and  ES were  not analyzed for resin  acids).  Similarly,  mean EAR
values of  other  resin  acids  in the  East  Waterway were  typically at  least 8
times higher than in other study areas.  Outside of  the East Waterway,  Areas
SR  and   OG  typically  had  the  next   highest  concentrations of resin  acids
(e.g., Figure 18).

     Distributions of DMA and abietic acid in  the East Waterway  are presented
in  Figure 19.    DMA  and  abietic  acid were similarly  distributed;   however,
DHA maximized at Station EW-04 (83,000 ug/kg DW; EAR=1,300), whereas  abietic
acid maximized at Station EW-13 (98,000 ug/kg DW; EAR=650).  As was  observed
for  virtually  all chemicals  in  the study,   the maximum  concentrations   in
the East  Waterway occurred   along  the east  shore.   Along this  shore,  a
bimodal  distribution was  apparent,  with maxima  at  Stations EW-04 and  EW-13
(Figure  19).  The interpretation of this bimodal distribution was impeded  by
the lack  of data  at  Stations  EW-10  and EW-12 (resin acids were not  analyzed
at these  stations) and by  variations in sediment TOC content along  the east
shore (see  Figure 10).   Nonetheless,  TOC-normalized  DHA  and  abietic acid
concentrations also  appeared  to  follow  a bimodal  distribution.    Although
concentrations of DHA and  abietic  acid  at  Stations  EW-04  and  EW-13 were
predominant  in  the   East  Waterway,  concentrations were  highly   elevated
throughout the East  Waterway; for DHA, EAR values  of >100 were reported  at
9 of the 13 stations in the East Waterway  (Figure 19).
                                    119

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Figure 19.  EAR of abietic acid and dehydroabietic  acid at individual
              stations in the East Waterway.
                                 121

-------
     Distributions  of other unchlorinated  resin  acids in the  East  Waterway
were similar to those of DMA and  abietic acid,  but  several discrepancies  are
noteworthy.  Sandaracopimaric   acid  occurred  at  high  concentrations   at
Stations  EW-04  and  EW-13,  but  was  most  concentrated  at  Station  EW-01
(14,000 ug/kg  DW;. EAR=95)  (Figure 20).  Strong gradients were apparent  for
sandaracopimaric  acid along the east shore  of the East Waterway (Figure 20).
However,  it  should  be  noted  that  sandaracopimaric  acid concentrations  in
duplicate  analyses  for Station  EW-07  were not   in  close  agreement (see
Sediment  Chemistry,  Quality  Assurance/Quality  Control   Results  in  Methods
section).   Isopimaric acid covaried with  abietic  acid in the  East  Waterway
(r=0.92,  n=18,  P<0.05;  study-wide),  with a maximum concentration at  Station
EW-13  (11,000  ug/kg  DW;  EAR=73).   Neoabietic acid  also maximized at  Station
EW-13  (14,000  ug/kg  DW;  EAR=93),  although  this  concentration was  over  18
times  that  of  any  other  station in  the  East  Waterway.   In addition,  the
detection frequency  of  neoabietic acid was  low  in the  East Waterway  relative
to those  of  other unchlorinated  resin  acids (46 percent  for  neoabietic acid
as compared to over  90  percent for  other unchlorinated resin  acids).

     Like  DMA, -12-  and 14-chlorodehydroabietic  acids  had  maximum  concen-
trations  at  Station EW-04  (12-chlorodehydroabietic acid =  11,000 ug/kg  DW,
EAR=73)  (Figure  21).    However,  in  contrast  to   the  bimodal  distribution
observed  for  DHA  and abietic acid  in  the  East  Waterway, monochlorodehydro-
abietic acids  had maxima toward the head of the  waterway  without a comparably
high concentration  at Station EW-13.  Dichlorodehydroabietic  acid (not  shown
in Figure 21)  also  maximized  at  Station  EW-04  (710  ug/kg  DW;  EAR=4.7)  but
had  comparable   concentrations   at  Stations   EW-07   and EW-13  (EAR=4-5).
Dichlorodehydroabietic  acid was  detected  at  lower   concentrations  at  two
other  stations  in the East Waterway  (Stations  EW-03  and EW-05) and was  not
detected  in any other study areas.

     Resin acids  were detected in  Area  OG,  but at far  lower concentrations
than were typically observed  in  the East  Waterway.   Concentrations of  DHA
and  abietic  acid  were  the most   elevated  among the resin acids detected  in
Area OG.   Maximum  concentrations of these  resin  acids  occurred at  Station
OG-03  (DHA=1,500  ug/kg  DW; EAR=24; abietic  acid  =  1,700 ug/kg DW;  EAR=11),
although  concentrations were typically  very consistent  for  all  OG  samples
                                     122

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                                        the highest concentration in
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Figure 20.  EAR of sandaracopimaric acid at individual stations in
              the East Waterway.
                                 123

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                   Undetected at detection limit shown

                   Not analyzed
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                                                   Puget Sound reference areas.
                                        Reference: U150 |ig/kg DW (12- and 14-chlofodehydroabietic acid).
Figure 21.  EAR of  12- and  14-chlorodehydroabietic acids at
              individual stations in the  East Waterway.
                                 124

-------
analyzed (e.g., agreement within a factor of 2-3 among most stations  and  for
most  resin  acids).   Concentrations at  Stations  OG-02 and  EW-15,  the most
closely  spaced stations  from Areas OG  and EW that were tested  for  resin
acids,  were very  similar  for most  resin  acids  (typically well  within  a
factor  of  2).   However,  it was not possible  to  discern  whether resin acid
contamination  in  Area OG  derived  from  the East Waterway or had dispersed
from the area near Station OG-03.  Notably, chlorinated resin acids  (12-  and
14-chlorodehydroabietic  acids)  were detected  in  Area OG  but at relatively
low concentrations  (e.g.,  12-chlorodehydroabietic  acid was  detected at  all
5 OG  stations  tested  at  concentrations  from  78  to 270 ug/kg  DW,  with  the
maximum concentration  at Station OG-06).

      In  the  Snohomish  River  (Area  SR),  resin   acid  contamination   was
most prevalent  at  Station   SR-05  (DHA=3,500  ug/kg  DW,  EAR=56;   abietic
acid = 2,300  ug/kg DW,  EAR=15).   Concentrations  at  adjacent Station  SR-04
were roughly 5 times  lower.   The only detected chlorinated resin acid in  the
Snohomish  River occurred  at  Station  SR-04  (12-chlorodehydroabietic  acid,
61-ug/kg DW).  In Steamboat Slough,  resin acids were most frequently detected
at Station  SS 02,  although  several resin  acids were  detected  at  less than.
250 ug/kg DW at Station SS-03.  The highest resin acid concentration  in this
area  was  for DMA  (730 ug/kg DW at Station SS-02,  EAR=12).   No chlorinated
resin acids were detected in  Steamboat Slough.

     Phenol  and  Alkvl-Substituted  Phenols—Of the  compounds  in  this  group
(phenol,  2-   and   4-methylphenol,  and  2,4-dimethylphenol),   phenol   and
4-methyl phenol   were  both  frequently   detected,  but   4-methyl phenol
concentrations were  by far the most elevated.  4-Methylphenol  was detected
in over  90  percent of the  samples  in  which it was  analyzed  and occurred at
the most  elevated  concentrations  of  any  chemical   measured in  this  study
(maximum  EAR=7,500).   Roughly  30  percent  of  4-methylphenol concentrations
exceeded an  EAR  of 100 and  roughly 9  percent  exceeded an EAR of 1,000 (all
of the  latter  group were from  the  East  Waterway).   Of all  the study areas,
the  highest mean  4-methylphenol  concentration  was  observed  in  the East
Waterway (mean = 25,000 ug/kg DW; EAR=1,900) (Figure 22).   However, the mean
EAR in Area NG exceeded 100  (EAR=120)  and the mean  EAR in Area OG was 71.
                                    125

-------
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 P S   Port Susan
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 O G   Offshore Port Gardner
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 S D   Snohomish Delta
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 S S   Steamboat Slough
 E S   Ebey Slough

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 Sound reference areas.
                        PS
                             NG     OG     EW     SD      SR     SS     ES
                                                    AREAS
                                                                                                          Reference; LI3 ng/kg DW.
                 Figure 22.  Mean EAR of 4-methylphenol in sediments from all study areas.

-------
     Within the  East  Waterway,  the highest 4-methylphenol concentration  was
observed at  Station EW-07  (98,000  ug/kg DW; EAR=7,500)  (Figure 23).   Four
other  stations  along  the east  shore had  EAR  >1,000,  with  concentrations
ranging from  15,000 to 35,000  ug/kg DW  (Stations  EW-04,  EW-10, EW-13,  and
EW-14)..  Concentrations  decreased  along  the east  shore moving  in  either
direction from Station EW-07.  Contamination  in the  East Waterway toward  the
west  shore  was not  well  characterized  because  only  Station  EW-11  in that
area was analyzed  for  A/B/N  compounds.   The 4-methylphenol  concentration  at
Station EW-11 was  highly  elevated  (EAR=550).

     Area NG  also  had  elevated  4-methylphenol concentrations.   However,  the
highest  concentrations were observed  at  Station   NG-05  (9,700  ug/kg  DW;
EAR=730) and  nearby stations,  not at stations  near the mouth  of  the East
Waterway (e.g.,  Stations  NG-01  and NG-12;  U20 to  500  ug/kg DW).  Hence,  4-
methylphenol contamination in Area NG did not appear to derive from the East
Waterway.   EAR values >100  were observed  at Stations NG-04,  NG-09,  NG-10,
NG-11,  and  NG-14  (all  between   1,600  and 2,400 ug/kg  DW).    Concentrations
were somewhat patchy  in this are/i,  but did not exceed  l.,000 ug/kg DW at  any
other NG stations. '

     4-Methylphenol concentrations  were  generally  consistent  among stations
in Area OG  (EAR from 68 to 97 at Stations OG-01 to OG-05).   Distributions  of
4-methylphenol between  the  East Waterway mouth and  OG stations nearest  the
mouth did  not  suggest that  4-methylphenol  contamination  in  Area OG  derived
from the more  contaminated  East Waterway.  The 4-methylphenol concentration
at Station OG-01 (nearest the East Waterway) was at  least 5  times lower than
concentrations at  the nearest East  Waterway  stations  (e.g.,  Station  EW-15)
but was more than  double  the concentration  at intervening Station NG-01.   In
other  areas,   high  4-methylphenol   concentrations   (EAR  >100)  occurred   at
Station SR-05 (2,000 ug/kg DW) and Station  ES-03 (1,400 ug/kg  DW).

     Phenol,   like  4-methylphenol,  was   detected   frequently  (detection
frequency >90 percent)  but  at far lower concentrations than 4-methylphenol.
The mean EAR  for phenol  in  the  East Waterway (40)  was greater  than  that  of
any other  study  area  (Figure 24);  Areas NG, OG,  and  ES all  had mean EARs
between 11  and 17.   Laboratory  contamination of phenol was  observed  for  two
                                     127

-------
         3000-
         2000
         .1000 -
              ^ THRESHOLD
                                                    NA
                                                  NA
                                                   NA
                                           EW-11    EW-09   EW-06   EW-03
UJ
o
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UJ
DC
UJ
u.
UJ

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UJ O)
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         3000-
2000 H
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THRESHOLD
8000-;
         7000-
         6000-
5000-
         4000-
         3000-
         2000-
          1000-
 THRESHOLD1
NA
                                           NA
NA
                                         EW-08   EW-05   EW-02
              EW-15    EW-14   EW-13   EW-12    EW-10   EW-07   EW-04   EW-01
                                    STATIONS
              NA    Not analyzed
                                       *THRESHOLD - equivalent to

                                        the highest concentration in

                                        Puget Sound reference areas.
                                                                  Reference: L13 ng/Kg DW.
Figure 23.  EAR of 4-methylphenol at individual  stations in the

              East Waterway.
                                128

-------
ro
       LU
       O
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       UJ
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       UJ
       U.
       UJ
       §1
       m *
O
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       UJ
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       UJ
45


40


35


30


25-


20-


15-


10-
          7HRESHOLD **
                  0
                       I
                      PS
                                       T
                                      OG
                                                                                               LEGEND
EW
                                          p s   Port Susan
                                          N G   Nearshore Port Gardner
                                          O G   Offshore Port Gardner
                                          E W   East Waterway
                                          SO   Snohomish Delta
                                          S R   Snohomish River
                                          S S   Steamboat Slough
                                          E S   Ebey Slough

                                         * THRESHOLD - equivalent to the
                                          highest concentration in Puget
                                          Sound reference areas.
                                                                   ES
                                                  AREAS
                                                                                                       Reference: L33 ng/kg DW.
                Figure 24.  Mean EAR of phenol in sediments from all study areas.

-------
blanks analyzed  during this study (see Chemistry, Quality  Assurance/Quality
Control Results  in Methods  section), although the  level of  contamination  was
relatively minor.   For the samples associated with the contaminated  labora-
tory blank,  laboratory contamination  accounted  for roughly  20  to 30  ug/kg
DW.  All of these samples were blank-corrected.

     Within the  East Waterway, the maximum phenol  concentration was observed
at Station EW-10 (2,900 ug/kg DW; EAR=88) (Figure 25).   No clear  concentra-
tion gradient  was apparent  along the east  shore  of the waterway on a  dry
weight or  TOC-normalized basis (Figure 25).   The only sample analyzed near
the west shore of the waterway, Station EW-11,  had  a concentration  comparable
to most  stations on the  east shore  (1,200 ug/kg  DW;  EAR=36).   Only one  EW
sample required  blank  correction  (Station EW-01; 1,600 ug/kg  DW).

     Phenol concentrations  at  certain  stations in  Area NG were comparable  to
those  in  the  East  Waterway.   The maximum concentration  in  Area  NG was
observed at Station NG-09  (2,100  ug/kg DW, EAR=64).  Overall, phenol  concen-
trations were  relatively patchy  (Figure  26)  and  did  not suggest  dispersion
from a single  source.   Blank correction- was performed on concentrations  for
Stations NG-06 and. NG-12  to NG-15.    Phenol  concentrations in  Area OG were
consistent  throughout  the  area  (380+73  ug/kg DW;  n=7,  all  values  blank-
corrected).  In  Ebey  Slough,  phenol   was  detected   at  Station  ES-03   at
1,200 ug/kg DW  (EAR=36, blank-corrected).   The  other two  ES stations were
blank-corrected  down to  detection  limits  (25  ug/kg DW).

     2-Methylphenol  and  2,4-dimethylphenol   were  seldom  detected  in  this
study  (the former compound was detected  three times  and the latter, twice)
(see Table 17).   Both phenols occurred  at Stations  EW-04 and  EW-07,  with
maximum concentrations at the former station.  2-Methylphenol  was reported  at
1,200 ug/kg DW  (EAR=170) at  Station  EW-04 and at 330  ug/kg  DW (EAR=47)  at
adjacent Station EW-07.   Detection limits were somewhat high (200 ug/kg  DW)
at nearby  Stations  EW-10 and EW-12,  but did not greatly  interfere with data
interpretation.  2,4-Dimethylphenol was detected at 520 ug/kg DW  (EAR=76)  at
Station  EW-04  and  occurred  at  100   ug/kg  DW  (EAR=15)  at  Station  EW-07.
2,4-Dimethylphenol was undetected throughout the rest of the East Waterway at
detection  limits of 20-50  ug/kg DW.
                                     130

-------
 UJ
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 UJ
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 UJ
 UJ O>
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          50 -



          40 -



          30 -



         -20 }
          10
h« THRESHOLD*
          30 -


          20 -
   C"    10 -
             •< THRESHOLD'
          90 -



          80 -



          70 -



          60 -



          50



          40 -



          30 -



          20 -



          10 -


THRESHOLD* »•
                                                   NA
                                                          NA
NA
                                           EW-11    EW-09   EW-06    EW-03
                                                   NA
                                                          NA
                                                                 NA
                                                  EW-08   EW-05   EW-02
             EW-15    EW-14   EW-13   EW-12   EW-10   EW-07   EW-04   EW-01
                                   STATIONS
             NA    Not analyzed
                                                 THRESHOLD - equivalent to
                                                 the highest concentration in
                                                 Puget Sound reference areas.
                                                                  Reference: L33 ng/kg DW.
Figure 25.   EAR of phenol at individual stations in the East Waterway.
                                131

-------
OJ
ro
       90 -


       80 -


       70 -


       60-


       50-


       40 -


       30 -


       20


       10

THRESHOLDV
UJ
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UJ
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UJ
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                  NG-11
NG-09
                               NG-06  |  NG-08
                                                NG-04    NG-03
                                                                                                            LEGEND
                                                                         P S   Port Susan
                                                                         N G   Nearshore Port Gardner
                                                                         O G   Offshore Port Gardner
                                                                         E W   East Waterway
                                                                         S D   Snohomish Delta
                                                                         S R   Snohomish River
                                                                         S S   Steamboat Slough
                                                                         E S   Ebey Slough

                                                                         B    Blank-corrected down to
                                                                              detection limit shown

                                                                       * THRESHOLD - equivalent to the
                                                                         highest concentration in Puget
                                                                         Sound reference areas.
     NG-02
     NG-01
                       NG-10
                          NG-15
              NG-07    NG-05
                                                    NG-14
NG-13
NG-12
                                                STATIONS
                                                                                                             Reference: L33 jig/kg DW.
                 Figure 26.  EAR of phenol at individual stations in Area NG.

-------
     Chlorinated  Phenols  and  Guaiacols—Certain  chlorinated  phenols  have
been commercially produced for various purposes (e.g., pentachlorophenol, or
PCP, has been  used  as a biocide);  however,  chlorinated  phenols and chlori-
nated guaiacols  are  well-documented by-products of pulp  bleaching processes
(e.g.,  Carlberg et al. 1986;  Leuenberger et  al.  1985,  Kringstad  and Lindstrom
1984, Claeys et  al.  1980,  Leach  and Thakore 1975, 1977).  Lignin, a primary
component of  wood,   is  a natural polymer formed  by  the  mixture of various
4-hydroxyarylpropenyl  alcohols  (e.g.,  Kringstad  and  Lindstrom 1984  and
references  therein).    The   chlorine  bleaching   process,  through  various
substitution  and  dealkylation  mechanisms,  can  depolymerize   lignin  and
generate  various chlorinated  phenols and  guaiacols, among  other phenolic
compounds  (e.g.,  catechols)   (Kringstad  and Lindstrom 1984,  Leuenberger et
al.  1985, and Claeys  et  al.  1980).   Chlorinated guaiacols,  like chlorinated
resin  acids,  are excellent  geochemical tracers  of  pulp mills  because  of
their unique origin.

     Chlorinated  phenols  and guaiacols  (see structures   in Figure 15)  were
detected  mqst  often  in  the  East  Waterw§y and  occurred at   the  highest
concentrations  in that  area.-   For the 'nine  chlorinated phenols/guaiacols
analyzed  in this  study  (i.e.,  2-chlorophenol,  2,4-dichlorophenol,  2,4,5-
and  2,4,6-trichlorophenol,   2,3,4,6-tetrachlorophenol,   PCP,   3,4,5-   and
4,5,6-trichloroguaiacol, and tetrachloroguaiacol), maximum EAR values within
the  East Waterway  ranged  from  12  to  47   (n=9)  with a  mean of  30  (n=9);
outside  of  the East Waterway, maximum EAR   for these compounds ranged from
0.5 to 14 (n=9), with a mean of 3.9 (n=9).

     Chlorinated  phenols/guaiacols  tended  to  have  similar  distribution
patterns within  the East Waterway, but  several  important distinctions were
apparent.   Di-,  tri-,  and  tetrachlorophenol distributions corresponded well
in  the  East Waterway (and in the  overall study,  r>0.8 for all  correlations
between  2,4-dichlorophenol,  2,4,5- and  2,4,6-trichlorophenol,  and 2,3,4,6-
tetrachlorophenol).   Distributions of 2,4-dichlorophenol and 2,4,6-trichloro-
phenol   (Figure  27)   are  representative of  this group of compounds.   As is
apparent  in Figure   27,  correlations between  2,4-dichlorophenol  and 2,4,6-
trichlorophenol  were particularly  strong  (r>0.99,  n=19,  PO.05).   For di-
through tetrachlorophenols, maximum concentrations were observed at the head
                                    133

-------
                   30-



                   20 -



                   10 -

         THRESHOLD**"
                                                       FTKi
                                                       EW-11   EW-09  EW-06   EW-03
UJ
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UJ
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UJ
U.
UJ
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O I
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                   50 -i
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         THRESHOLD **J

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                                                            EW-08   EW-05    EW-02
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                   601

                   50^
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                   30-


                   20-1
         THRESHOLD
                                                     U  U
                                                                           ^C±.
                      EW-15   EW-14   EW-13    EW-12   EW-10    EW-07   EW-04   EW-01
                                             STATIONS
                 2,4-Dichlorophenol

                 2,4,6-Trichlorophenol

                 Undetected at detection limit shown
                                                         *THRESHOLD - equivalent to
                                                           the highest concentration in
                                                           Pugel Sound reference areas.
                                            Reference: U6.8 (ig/kg DW (2,4-dichloro- and 2,4,6-lrichlorophenol).
    Figure  27.  EAR of 2,4-dichlorophenol  and 2,4,6-trichlorophenol
                  at individual stations in the  East Waterway.
                                     134

-------
of the  East  Waterway (i.e., at Stations  EW-01  and  EW-02;  see Figure 27  and
Table 17).   Concentrations of these compounds  decreased  sharply toward  the
mouth of the waterway (e.g., Figure 27}, although the decrease in concentra-
tion from Station  EW-01  to EW-04  was  not as great for 2,4,5-trichlorophenol
and 2,3,4,6-tetrachlorophenol as it was for the  compounds shown in Figure  27.
High detection limits were  reported for chlorinated phenols at Station  EW-12
(Figure  27).    Full-scan   analyses,  which  were  less  sensitive  than  the
dedicated chlorinated phenol  analyses,  were performed at Stations EW-12  and
EW-10.

     Chlorinated guaiacol distributions in the  East Waterway were similar to
those of  di-  through  tetrachlorophenols  in that strong concentration maxima
occurred  at  Station  EW-01 for  all  guaiacols  analyzed  (e.g.,  Figure 28).
However,  unlike  the  chlorinated  phenols  discussed  above,  all  chlorinated
guaiacols were undetected at Station EW-02.  3,4,5-Trichloroguaiacol was  the
most commonly detected of the chloroguaiacols (see Table 17).

     Distributions  of  PCP and  2-chlorophenol   in  the.  East  Waterway were
somewhat  different  than  those of the other  chlorinated  phenols  and chlori-
nated guaiacols; both PCP and 2-chlorophenol had strong concentration maxima
at Station EW-04 (see Table 17), whereas  concentrations at Station EW-01 were
considerably  lower  (Figure  29).    However,  as  was  observed  for  the  other
chlorinated  phenols,  concentrations decreased  sharply toward the  mouth of
the waterway.

     Outside  of  the  East  Waterway,  chlorinated phenols  and  guaiacols were
seldom  detected  at  concentrations exceeding the  maximum  detection  limits
reported  in Puget Sound  reference areas  (see Table 18) (in fact, most detec-
ted values were <10 ug/kg DW).  Among the chlorinated phenols, 2-chlorophenol
occurred  at the highest  concentration outside of the East Waterway  (36  ug/kg
DW at Station SD-02; EAR=10).  Dichloro-, trichloro-, and pentachlorophenols
were detected  at most OG  stations,  but typically at <5  ug/kg DW.   Similar
chlorinated  phenol  results were  observed  at   Station  SS-03  in Steamboat
Slough.   Chlorinated  guaiacols were  detected a  total  of seven times outside
of  the  East Waterway  (at  Stations OG-07,  SD-02,  SS-02,  SS-03,  SS-04,  and
SS-06).  The highest concentration occurred at Station SS-04 [43 ug/kg  DW  for
                                    135

-------
                   20 -
                   15
                   10 -
                    5 ~


         THRESHOLD* »•(
                    0 —
                                                       EW-11  EW-09  EW-06   EW-03
O
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                   35 -


                   30-



                   25-


                   20-


                   15-


                   10-
         THRESHOLD
                                      u u
                                                                    u  u
                                              NA      NA
                                                            u  u
                      EW-15    EW-14   EW-13   EW-12   EW-10   EW-07    EW-04   EW-01

                                            STATIONS
                3,4,5-Trichloroguaiacol


                Tetrachloroguaiacol
           U    Undetected at detection limit shown

          NA    Not analyzed
                                                          * THRESHOLD - equivalent to

                                                           the highest concentration in
                                                           Puget Sound reference areas.
                                              Reference:  U3 ng/kg DW (3,4,5-lrichloro- and tetrachloroguaiacol).
    Figure 28.   EAR of 3,4,5-trichloroguaiacol and tetrachloroguaiacol
                   at individual  stations in the East Waterway.
                                      136

-------
01
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UJ
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UJ
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                  0 —
                  10-.
THRESHOLD
                  15-
                  10 -
                  5-
        THRESHOLD
                                                Y,
                                                  EW-11   EW-09   EW-06   EW-03
**.
n -

II
u

                                                 EW-08   EW-05   EW-02
                    EW-15   EW-14   EW-13   EW-12    EW-10   EW-07   EW-04   EW-01
                                          STATIONS
                    U     Undetected at detection

                          limit shown
                                               THRESHOLD - equivalent to
                                               the highest concentration in
                                               Puget Sound reference areas.
                                                                     Reference: L33 (ig/kg DW.
    Figure 29.  EAR of pentachlorophenol at individual stations in the
                 East Waterway.
                                   137

-------
4,5,6-trichloroguaiacol (EAR=14)].  All other chlorinated guaiacol concentra-
tions outside  of the East Waterway were  near detection limits (from 1 to 9
ug/kg DW).

     Chlorinated  Benzenes--Qn1v  one reported chlorinated benzene concentra-
tion exceeded  reference conditions in  this  study:   1,2-dichlorobenzene was
detected at  96 ug/kg  DW  at  Station EW-04 in  the  East Waterway.   Detection
limits  for 1,2-dichlorobenzene  were   relatively  high   in the  East Waterway
(e.g.,  100 ug/kg  DW at adjacent  Station EW-07) and  impeded  data analysis
somewhat in this  area.  However, the detection  limit at  nearby Station  EW-01
(10  ug/kg  DW)   indicated  that  contamination  from  Station  EW-04 was not
prevalent  at the  head  of the waterway.

     Phthalate  Esters—Two phthalate  esters were of  concern  in  this  study
[butyl   benzyl    phthalate   and   bis(2-ethylhexyl)phthalate].   Bis(2-ethyl-
hexyl)phthalate  was detected  frequently  (detection frequency  =  39/54) but
was  also  observed  as  a   laboratory   contaminant  in  most method   blanks.
However,  concentrations in blanks  were relatively  low  (e.g.,  equivalent to
roughly  50 ug/kg DW).   The highest concentrations were  observed in the East
Waterway  (Station  EW-14,  930  ug/kg DW,  EAR=55).    Concentrations  at  other
stations along  the east shore of the East Waterway ranged  from 110 ug/kg DW
(Station   EW-15)  to 650   ug/kg  DW (Station EW-04);  the  samples  with the
highest  concentrations  in  the  East  Waterway  were  not   associated  with
contaminated  method blanks.   All  other stations  in  the  study  had bis(2-
ethylhexyl)phthalate concentrations less than  5  times  the maximum observed
blank concentration (i.e.,  roughly  250 ug/kg DW).

     Butyl  benzyl phthalate  was  detected  infrequently  (detection frequency =
6/54)  and  occurred above  Puget Sound  reference  conditions  at  only  three
stations:   Station  EW-01  in the East  Waterway (70 ug/kg DW), Station  SR-05
(44  ug/kg  DW),  and Station NG-14 (36  ug/kg  DW).  Detection limits  for  butyl
benzyl phthalate were  20  ug/kg DW  or less throughout  the study.

     Pesticides—Pesticides  were  seldom  detected   in   the  study,  although
detection  limits  in certain  samples  were  relatively  high as  a  result  of
sample  dilution  during chemical  analysis.    Samples  with relatively  high
                                     138

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detection  limits  included  Stations  EW-01,  EW-04, EW-14,  EW-15,  and  NG-09,
which typically  had detection  limits  of 50 to-200  ug/kg  DW for individual
pesticides.  Two  of these samples,  EW-04 and NG-09,  had high PCB concentra-
tions that were  likely  responsible  for GC/ECD interferences.  Data  analysis
for  pesticides  was  not  greatly impeded  by high detection  limits  at these
five stations because lower detection  limits were reported at other  stations
in these areas.   The sole pesticide detection above  reference conditions was
p,p'-ODT  at  Station  SD-03  (23  ug/kg  DW;  EAR=2.3).   Detection  limits  for
p,p'-DDT at nearby  stations ranged from  1 to 10 ug/kg DW.

     N-Nitrosodiphenvlamine--N-nitrosodipheny1amine  was detected seven times
over  a  relatively  narrow concentration  range.   The  highest concentration
(57 ug/kg DW)  was  observed  at Station  EW-01.    N-nitrosodiphenylamine  was
detected  at  Stations OG-03 through  OG-07 at concentrations  of  15-38 ug/kg
DW.  This  compound  was  also detected at 48 ug/kg DW at Station SS-01  and at
28  ug/kg  DW  at  Station  SS-06.  Other  samples  with  reported concentrations
between 10 and 30 ug/kg DW included Stations ES-02,  ES-03, NG-06, and  SD-01.
Detection.limits  for N-nitrosodiphenylamine were 10  ug/kg DW.

     Miscellaneous  Extractables  and  TIP  Compounds—Compounds  assigned  to
this class include  benzyl alcohol, benzoic acid, dibenzofuran, 2-methylnaph-
thalene,  1-methylpyrene,  retene,  a cymene  isomer,  dibenzothiophene,  1,2,4-
trithiolane,    a   diterpenoid   hydrocarbon   (possibly   dehydroabietane),   a
diterpenoid alcohol  (possibly  totarol),  hexadecanoic acid, hexadecanoic acid
methyl  ester,  hexadecenoic acid methyl  ester,  cholesterol,  campesterol,  an
unidentified  alkanol,   and  two  isomers  with  mass   spectral  base  peaks  at
m/z 181.   With  the exception  of the  first  four compounds,  the chemicals
listed  above  are TIO compounds.   TIO compounds  are tentatively identified
organic compounds found  during mass  spectral searches  of sample extracts;
they represent some of the most prevalent peaks in sample chromatograms that
were not  among  the original target compounds.   Some,  possibly most,  of the
TIO compounds found  in this study are related to target  compounds  in  terms of
chemical structure, probable sources, or  both.  Relationships between  target
compounds and  TIO compounds will be addressed  in  this  section,  when  appli-
cable.
                                    139

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     Several of  the miscellaneous extractable organic compounds are  closely
related to PAH (i.e., 2-methylnaphthalene, 1-methylpyrene, dibenzofuran,  and
dibenzothiophene).   Because these compounds  correlated relatively well with
PAH, their distribution will not be described here.  Correlation coefficients
between these compounds and related PAH are  as follows:  2-methylnaphthalene
vs. naphthalene  (r=0.96,  n=35,  P<0.05);  1-methylpyrene vs.  pyrene  (r=0.77,
n=25,   PO.05);  dibenzofuran  vs.  HPAH (r=0.95, n=44,  P<0.05);  and dibenzo-
thiophene vs. HPAH  (r=0.96, n=19,  P<0.05).

     Benzoic acid  was detected  in roughly half of the  samples  in which  it
was analyzed and occurred at the  highest  concentrations  in  Areas EW and  NG
(Figure 30).  The maximum benzoic  acid concentration was reported  at  Station
EW-14  in  the East  Waterway  (5,900 ug/kg  DW,  EAR=41) but benzoic acid was
undetected at nearby stations at  detection  limits  of 200 ug/kg DW or  less.
Benzoic acid was otherwise  undetected throughout the East Waterway, although
detection limits were relatively high in  most samples (up to 800  ug/kg DW).
In  Area  NG,  benzoic acid  concentrations  were elevated  at  Stations NG-05,
NG-07,  and  NG-08   (1,300-2,100  ug/kg  DW),  whereas  concentrations  were.
typically at least  5  times  lower at other  NG stations.  Benzoic acid  concen-
trations  also  exceeded Puget Sound reference conditions  at Stations  SR-05
(1,000  ug/kg DW),  SD-03  (770  ug/kg  DW),  and  ES-03  (760 ug/kg  DW;  blank-
corrected).   Of  the samples  discussed  above,  only  the  latter  sample was
associated with  the method blank  contaminated at  roughly 160 ug/kg  DW (see
Sediment  Chemistry,  Quality  Assurance/Quality  Control  Results  in   Methods
section).

     Benzyl  alcohol  was detected  above Puget  Sound reference conditions  in
four  samples.   The  highest concentration  was observed  at Station EW-04  in
the  East Waterway  (810  ug/kg  DW;   EAR=81).    Detection  limits  at  nearby
stations  ranged  from 20  ug/kg  DW to 100  ug/kg  DW.  Near the  mouth of the
East  Waterway,  benzyl alcohol  was detected  at 58  ug/kg  DW  (Station EW-11)
and at 99 ug/kg  DW  (Station SD-03).   Benzyl  alcohol was detected at 42  ug/kg
DW at Station SR-05.

     Most (14/15) TIO compounds had maximum concentrations in the East Water-
way,  and  11/15  had maximum concentrations at  Station EW-04  (see  Table 17).
                                     140

-------
          15
UJ
O
z
UJ
cc
UJ
u.
UJ
DC-
UJ TO
§1
ffl *
z
o
10
           5 -
    THRESHOLD
UJ
_J
UJ
                i
               PS
                                                                  \ZZA
                                                                                    LEGEND
                                                  P S  Port Susan
                                                  N G  Nearshore Port Gardner
                                                  O G  Offshore Port Gardner
                                                  EW  East Waterway
                                                  S D  Snohomish Delta
                                                  SR  Snohomish River
                                                  S S  Steamboat Slough
                                                  E S  Ebey Slough

                                                 * THRESHOLD - equivalent to the
                                                  highest concentration in Puget
                                                  Sound reference areas.
                    NG
OG
EW     SO     SR     SS
ES
                                           AREAS
                                                                                               Reference: L150 ng/kg DW.
          Figure 30.  Mean EAR of benzoic acid in sediments from all study areas.

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However, some TIO  compounds  were outstanding in their extreme elevations  in
the East  Waterway relative  to  other areas.  The  mean  EAR of the  following
four TIO  compounds were  over  15 times higher  in  the  East Waterway than  in
any other  study  area:   retene;  a  diterpenoid hydrocarbon (possibly dehyro-
abietane); a  diterpenoid  alcohol  (possibly totarol);  and 1,2,4-trithiolane
(a  sulfur-containing  heterocycle).    The  mean  EAR of  retene  in  the  East
Waterway  (39) was  23 times  the  next highest mean EAR (in Area OG).   Within
the  East   Waterway,  retene  distributions  followed  a bimodal  pattern  with
concentration maxima at Stations EW-04 and EW-13  (3,100 and 2,900  ug/kg DW,
respectively;  EAR>100).    This  distribution  pattern was  similar  to  that
observed  for  DMA  (Figure 19).   The  correspondence between DMA and  retene
(r=0.99, n=20, P<0.05)  is  not unexpected,  as the diagenetic transformation  of
abietic-type resin acids  to  retene has been proposed by several researchers
(e.g.,  Simoneit 1986 and  references  therein; Wakeham et al. 1980; Barnes and
Barnes  1983).    The  structural   relationship  between  retene  and OHA  is
apparent  from Figure  15.   Retene  has  previously been detected  in  marine
sediments  near  pulft  mill   discharges   (Yamaoka   1979;  Tetra  Tech 1985 a.).
Related sources of retene exist (e.g.,  brown coal, which can contain  fossil
resins; Thomas 1970),  but are improbable  in  the  East Waterway.

     The  diterpenoid  hydrocarbon  TIO compound  was highly elevated  in the
East Waterway (mean  EAR=160  in  the East Waterway vs. a mean EAR of  5 in  Area
OG,  the  next  most  contaminated  area).    Within  the  East Waterway,  this-
compound was predominant  at  Station  EW-04  (23,000  ug/kg DW).  The concentra-
tion at  Station  EW-04 was  over 10 times  the concentration  at  any other  EW
station and at least 100  times  the concentrations  at stations in other study
areas.    The  mass  spectrum  of  this hydrocarbon  was similar  to  that  of
dehydroabietane (e.g., see spectrum  in Kitadani  et al. 1970), although other
structures  are  possible.   The  structural  relationship between  dehydro-
abietane  and  DMA  is  apparent from  Figure 15.    In  addition, dehydroabietane
has been reported  in sulfite pulp  effluent (Leuenberger et al. 1985) and has
been found in sediments near pulp  mill discharges  (Yamaoka 1979).

     The concentration of the diterpenoid alcohol TIO compound  also  maximized
in the  East  Waterway,  but its  distribution was different than that of most
TIO  compounds.    The  maximum  concentration   occurred   at  Station   EW-11
                                     142

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(8,600 ug/kg DW),  with lower concentrations reported along the east  shore  of
the waterway  (e.g.,  1,100 to  1,300  ug/kg DW at  Stations  EW-01, EW-10, and
EW-14).    Diterpenoid  alcohols  are structurally related  to resin acids  (see
Figure 15) and  have been  reported in pulp mill  effluents  (e.g.,  Leuenberger
et  al.  1985;  Leach  and Thakore  1977).    However,  the  distribution of the
diterpenoid alcohol TIO  in the East Waterway did not closely correspond  to
resin acid distributions.   Also,  the compound was  detected at a relatively
high  concentration   away   from  pulp   mill  discharges   (Station NG-11,
1,100 ug/kg  DW).    The mass  spectrum was similar  to  that  of  totarol  (a
podocarpa-8,ll,13-triene derivative).

      1,2,4-Trithiolane, a  sulfur-containing heterocycle  (02^3),  was  most
concentrated at Station EW-04 (5,800 ug/kg DW),  with lower concentrations  at
other stations along the  east  shore of  the  East Waterway  (1,400  to  1,600
ug/kg DW at  Stations  EW-10  and  EW-01).   Outside  of  the  East Waterway,
detected concentrations were less than 200 ug/kg DW, and typically less  than
100 ug/kg DW.

      Concentrations of a cymene  isomer were  highest in the East Waterway  at
Stations  EW-04 (2,900 ug/kg DW)  and EW-13 (1,000 ug/kg DW),  and were  thus
consistent with certain resin  acid  distributions.   Concentrations  outside
the East Waterway were  highest  in Area OG and were relatively consistent  in
that  area (240 + 77 ug/kg  DW,  n=7).    Para-cymene  has  been  reported  in
sulfite  pulp  mill  effluents and  is  thought to derive from alpha-pinene,  a
cyclic monoterpene  (Leuenberger  et  al.  1985),  although other  sources  also
exist.   The  isomer (i.e.,  ortho-,  meta-, or para-)  observed in this  study
could not be determined in the absence of standards.

      Hexadecanoic  acid  occurred  at  the  highest  concentration  in  the  East
Waterway  at  Stations EW-10  (2,300  ug/kg  DW),  EW-07  (1,400  ug/kg  DW), and
EW-11 (1,000 ug/kg DW).   Hexadecanoic acid methyl  ester and hexadecenoic acid
methyl ester  both  occurred at  the highest concentration  at  Station  EW-04,
but the concentrations did not exceed an  EAR of 10.  These fatty  acid methyl
esters were  widespread  and occurred over a  relatively narrow concentration
range throughout the  study  area.   Clg and C18 fatty acids occur  commonly  in
many  organisms and  are  routinely  reported  in   recent  estuarine sediments
                                    143

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(along with fatty  acid  methyl  esters).   Fatty acids, especially unsaturated
Cis  and  C^g  fatty acids,  have been  reported as  components of  pulp mill
effluents  (e.g.,  Leach  and  Thakore 1977)  but did not  appear  to  be  highly
elevated in the East Waterway.

     Two sterols  were reported  as  TIO compounds:   cholesterol  and campes-
terol.   Both  compounds  had  maximum concentrations at  Station  EW-04  in the
East Waterway  (cholesterol =  630  ug/kg DW;  campesterol  = 1,100 ug/kg DW),
although concentrations were generally  not  highly elevated.

     Three  TIO  compounds  reported  in  this  study will  not  be  discussed in
detail because  their  identities are not well  characterized.   The compounds
reported as base  peak  m/z (mass/charge)  181  (isomers 1  and 2)  had  simple
spectra with relatively  strong  ion  intensities at m/z  165, 181,  and 210 (the
latter was  presumably  the molecular ion).   These compounds,  which  eluted
near one another  during  GC/MS  analysis, both occurred at maximum concentra-
tions at Station  EW-04  and had similar distributions overall (r>0.99,  n=43,
PO.05).  A compound  tentatively identified as an alkanol also'maximized at
Station  EW-04,  but was widely  distributed  throughout  the study  area.   This
compound  had  a  mass  spectrum  with  a characteristic  alkane fragmentation
pattern  and with no  discernible molecular ion.   However,  the  compound was
apparently  of  relatively  high  molecular   weight,  as  it eluted  near d^-
benz(a)anthracene  (molecular weight = 240)  during GC/MS analysis.

     Volatile Organic Compounds—Acetone and total xylenes were infrequently
detected and  occurred only  in  the East Waterway.   Acetone  was  detected at
Stations EW-05  (230 ug/kg DW),  EW-06  (140  ug/kg  DW),  EW-09 (120 ug/kg DW),
and  EW-07   (83  ug/kg  DW).    Acetone  was  undetected  at the remaining  15
stations tested with detection  limits of 45 ug/kg DW or  less.  Total xylenes
were  detected  in  the  East Waterway  along  a transect  of  three stations
[Stations EW-09  (33 ug/kg  DW),  EW-08  (39  ug/kg  DW),  EW-07  (16  ug/kg DW)],
and  at Station  EW-01  (6 ug/kg  DW).   Detection limits at the other stations
tested were less than 25 ug/kg  DW.
                                     144

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Comparison with Recent Historical Data

     Data from recent studies (1982 to 1987) of Everett Harbor were compiled
for comparison  to contaminant distributions  found in this  study and for a
more  comprehensive assessment of contamination.   Data  from  the following
historical studies were compiled:

     •    Storer  and  Arsenault  (1987) - data  from a sediment sampling
          program  conducted  as part  of  the City of Everett CSO control
          plan development.

     •    Anderson  and  Crecelius (1985),  Crecelius  et  al.  (1984), and
          U.S.  Army  Corps  of Engineers  (COE)  (1985)  -  data  from  a
          series  of  studies  evaluating sediment  quality  relative  to
          development of the East Waterway port for the Navy

     •    Battelle  Northwest  (1986)  - a report presenting results of a
          2-yr,  multiagency  study of eight locations  in Puget  Sound,
          including Everett Harbor

     •    U.S.  EPA (1982) -  unpublished  results  of sediment chemical
          surveys  of  Everett Harbor performed  in 1982

     •    Mai ins et al. (1982, 1985)  - data from three stations located
          in and  near the East  Waterway  (1982) and  from two stations
          located  near Mukilteo  (1985)

     •    Chapman  et  al.   (1984)  -    data  from a  survey  of biological
          effects  in  Everett Harbor, Samish  Bay,  and Bellingham Bay
          conducted for the National  Oceanic and Atmospheric Administra-
          tion  (only conventional  sediment  chemistry variables were
          tested).

Sampling  stations  from  these studies   are  plotted  in Figures  31  and  32.
Historical data tended to  confirm the distributions reported in  the present
study in  terms  of  overall  trends.  However, a number of chemicals that were
                                    145

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                          LEGEND
                »  CHAPMAN ETAL. (1964)
                0  CRECELIUS ET AJ_ (1964)
                7  BATTELLE11966)
                T  US EPA (1982)
                u  UALINS ET AL (1982)
                •  MALINSCTAL (19691
                O  ANDERSON ANOCRECELIUS(1965)
                •  STORERANOARSENAUUri19e7)
                O  US APMVCORPSOFENOINEERS(196S]
                •  mis STUDY
Figure 31.   Locations of sampling stations from historical studies
             of sediment chemistry in Everett Harbor.
 146

-------
           LEGEND

»  CHAPMAN ETAL. (1984)
0  CRECELIUS ET AL. (1984)

-------
most concentrated in the present study  (e.g., 4-methy1 phenol, dehydroabietic
acid) were  not measured in  historical  studies.   The  chemicals detected at
high frequencies  in  historical  studies  were PAH,  PCBs,  and metals.  Organic
EPA priority pollutants were  measured  by U.S.  EPA (1982) but were typically
undetected  at  relatively  high detection limits  (typically  200  ug/kg DW  for
A/B/N compounds).   In  the  sections below,  historical findings are discussed
for  metals,  PAH, PCBs,  and  several  other chemicals.   Phthalate ester  and
methylene chloride  data  are not discussed  because historical  data were  not
corrected for potential laboratory contamination.

Conventional Variables--

     Sulfide  and TOC  measurements were  made  during only  two of  the nine
historical  surveys.    The  highest  historical concentrations  of sulfide  and
TOC  were  found in the East Waterway.   The.maximum historical concentration
of  sulfides (1,400  mg/kg  DW)  was  measured at  Station  EDS-3  (U.S.  Army  COE
1985)  along the  southeastern shore of  the East  Waterway.    Outside  of  the
.East Waterway,  sulfide concentrations  never exceeded the'210 mg/kg DW value
measured  at Station EDS-1  in the  Snohomish River.   The maximum historical
concentrations  of TOC  (25 to 31  percent)  were measured at  Stations  EDS-4
(U.S.  Army COE 1985)  and A4  (Anderson  and  Crecelius  1985)  in  the East
Waterway, near  Station EW-13  of the present study  (23 percent TOC).  Outside
of  the East  Waterway, TOC  concentrations never  exceeded  the  4.4  percent
value measured  at Station  EDS-2, located in the Snohomish River.

Metals--

     Historical  metals data generally  supported the  results  of the present
study.   The highest  metals  concentrations  were  generally measured  in  the
East Waterway.   In  no case did concentrations of metals  of concern exceed
the  maximum concentration  measured  in  the present  study  (i.e.,  at Station
EW-14).   Historical  antimony  and mercury  data  were  limited  by  elevated
analytical  detection  limits.   Antimony was  undetected at  all  stations at
which it was measured  at a maximum detection limit of 4.0 mg/kg DW.  Mercury
detection  limits were 0.4  mg/kg  DW  for  many  of the  historical  samples.
Three samples  in  the East  Waterway had mercury concentrations exceeding  the
                                     148

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maximum  reference  area  concentration;  the  highest  mercury concentration
(0.406 mg/kg DW) was observed at Station E-06  (Battelle Northwest  1986).

     Stations  distributed  across  a  relatively  broad  area exceeded  the
maximum reference  area concentrations for arsenic.   Most of these  stations
were  within  the  East  Waterway.   However,  the highest  historical   arsenic
concentration  (46  mg/kg DW) was  measured  at  Station  e-11 (U.S.  EPA  1982),
outside the East Waterway.

     The  highest  historical  concentrations of copper  and lead  (115 and  195
mg/kg DW,  respectively)  were measured at  Station PS05 (Storer and Arsenault
1987),  immediately adjacent to Station  EW-07  of the  present study  (copper
and lead  = 71  and  88 mg/kg DW,  respectively).   Historical copper  concentra-
tions  only exceeded the maximum  reference  area concentration  in the East
Waterway  or in the  immediate vicinity of the East Waterway.   Historical lead
and zinc  concentrations exceeded  maximum reference area  concentrations over
the greatest  area  of  metals  measured in  historical  studies.   Most of  the
stations  with  high concentrations of these me'tals  were located  in the East
Waterway.  However,  sediment concentrations of both of these  metals exceeded
their maximum  reference area concentrations  throughout the study area.   The
highest   historical  concentrations  of  zinc  (1,070-1,210  mg/kg  DW)  were
measured  at  Stations  E-29  (U.S.  EPA  1982)  and E-04  (Battelle  1986), both
near Station EW-04  of  the present study (235 mg/kg DW of  zinc).

     Concentrations  of cadmium  in  historical  data sets exceeded the maximum
reference  area  concentration   only   in  the  East  Waterway.    The  highest
historical concentration  of cadmium  (4.63  mg/kg DW) was measured  at Station
BPS-30  (Crecelius  et al.  1984).

LPAH--

     Historical  LPAH  data  generally supported  the results  of  the  present
study, but comparisons revealed some spatial  heterogeneity of concentrations,
especially  in  the  East Waterway  (Figure  33).   Within  the East Waterway,
highly  contaminated Stations EW-04  and  EW-07  (23,000 to 25,000  ug/kg  DW)
were flanked  by historical stations  with  high concentrations [Station E-04
                                    149

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            LEGEND
•  CHAPMAN ETAL. (1984)
0  CRECELIUS ETAL (1984)
v  BATTELLE(1986)
*  U.S. EPA (1982)
A  MALINS ETAL (1982)
.4  MALINS ETAL. (1985)
D  ANDERSON AND CRECELIUS (1985)
•  STORER AND ARSENAULTf 1987)
O  U.S. ARMY CORPS OF ENGINEERS (1985)
•  THIS STUDY


              LPAH
  Designation
   Number
     1
     2
     3
     4
    ng/kg
  (dry weight)
> 15,000
> 5,000- 15,000
>500 - 5,000
undetected - 500
           Figure 33.  Contours of LPAH concentrations in East Waterway
                        sediments.
                                          150

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(17,000 ug/kg  DW;  Battelle Northwest 1986)  and  Station PS05  (100,000  ug/kg
DW; Storer and Arsenault  1987)].   Concentrations of most PAH  were  extremely
elevated at historical  Station  PS05,  even when compared to adjacent  Station
EW-07,  which  had  EAR >1,000 for  several PAH.   However,  results  from  the
present  study  and  Storer and  Arsenault  (1987)  agreed relatively well  in
another area (Stations  EW-10  and  PS06 had LPAH concentrations between  5,200
and 8,100 ug/kg DW).

     Historical LPAH  concentrations outside  the  East Waterway  were  typically
<1,500 ug/kg DW, although a concentration  of 11,000 ug/kg DW was  observed  at
Station MUK-B in Area NG  (Malins et al.  1985).   The concentration at  Station
MUK-B was considerably,  higher than that  at adjacent Stations MUK-A  and  NG-10
(both 1,200 ug/kg DW).

HPAH--

     Spatial heterogeneity  in the East  Waterway  was  more  apparent for  HPAH
than LPAH'(Figure  34).   HPAH  concentrations  at three historical  stations  in
the  East -Waterway  (Stations  PS05,  EDS-4, and BPS-30)  exceeded   the  maximum
HPAH concentration  observed  in  the present  study.   The extremely  high  HPAH
concentration at Station  PS05 (>200,000  ug/kg  DW; Storer and Arsenault  1987)
exceeded  the  concentration  at  adjacent  Station  EW-07 by over 40 times.
Station  EDS-4  (46,000  ug/kg  DW;  U.S.   Army  COE  1985)  had  a  far higher
concentration  than adjacent  Station  EDS-3  of the  same study (8,400  ug/kg
DW).   The  HPAH concentration at  Station BPS-30  (27,000 ug/kg DW;  Crecelius
et al. 1984), was over  30 times higher than  the  concentration  at  the  nearest
stations (E-02 and  E-03;  Battelle Northwest  1986).

     Historical  HPAH concentrations  were typically  far lower  outside  the
East Waterway  (e.g.,  <5,000  ug/kg DW),  although Stations MUK-B and MUK-A  in
Area NG had concentrations of 15,000  and  5,700 ug/kg DW, respectively.

PCBs —

     PCBs were  detected  in  roughly  half of  the 67  historical   stations  at
which they were measured.  The highest historical PCB concentration occurred
                                     151

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           LEGEND
•  CHAPMAN ET AL. (1984)
0  CRECELIUSETAL. (1984)
<7  BATTELLE(1986)
T  U.S. EPA (1982)
A  MALINSETAL. (1982)
A  MALINSETAL (1985)
Q  ANDERSON AND CRECELIUS (1985)
•  STORER AND ARSENAULT (1987)
O  U.S. ARMY CORPS OF ENGINEERS (1985)
•  THIS STUDY
 Designation
   Number
     1
     2
     3
     4
              HP AH
     ng/kg
  (dry weight)
> 15,000
> 5,000- 15,000
>500 - 5,000
undetected - 500
           Figure 34.  Contours of HPAH concentrations in East Waterway
                         sediments.
                                           152

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within the  East  Waterway (up to 1,000 ug/kg DW).  Within  the  East  Waterway,
PCB distributions  appeared  patchy  (Figure  35),  although  stations  on the east
shore and toward the head of the waterway  were  the mast  contaminated.   Three
historical  stations  near   Station  EW-04  (the  station  with  the  highest
concentration  in  the   present  study;  9,600  ug/kg  DW)  had  concentrations
between  500 and  1,000  ug/kg DW  (Stations E-29, E-03,  and E-04)  (U.S.  EPA
1982; Battelle  Northwest 1986).   A  PCB  concentration of  1,000 ug/kg  DW  was
reported  at Station BPS-30, north  of  that area.   PCB concentrations  from
100 to 650  ug/kg DW were reported at a number of other historical  stations in
the  East Waterway.   However,  PCBs were  also  undetected  at  low  detection
limits  (e.g.,  20  ug/kg DW)  throughout  the East Waterway, including  areas
with relatively  high detected values  (e.g., adjacent to  Station BPS-30).

Other Organic Compounds—

     Phenol  was  detected only  four times  in  historical studies  (detection
limits for  most  historical  stations were 200 ug/kg DW)  (U.S.  EPA 1982),  but
detected  concentrations  generally  supported  the findings of  the present
study.   Along  the  east  shore of the East "Waterway, the  phenol concentration
at  Station  E-04  (1,400 ug/kg  DW;  Battelle Northwest  1986)  was  similar  to
that  at  nearby  Station EW-04  (2,100 ug/kg  DW),  and  the concentration  at
Station  PS05  (660  ug/kg DW;  Storer  and  Arsenault  1987) was similar to that
at nearby Station  EW-07  (1,000  ug/kg DW).   However, the  phenol concentration
at  Station  E-01 was  considerably  lower  than  the blank-corrected  value  at
Station  EW-01  (250 vs.  1,600 ug/kg  DW).

     Two historical  stations in the East  Waterway were analyzed for  retene
(Maiins  et   al.  1982).    The  maximum  level  reported  was  similar to that
observed in the  present  study (roughly 3,000 ug/kg DW),  although  the highest
concentration observed by Mai ins et al. (1982;  2,900  ug/kg  DW at Station M01)
was considerably higher than at  nearby Station EW-11  of   the present  study
(62 ug/kg DW).

     Total xylenes were  detected once  in historical studies (Station PS05 in
the East Waterway, 140  ug/kg DW;  Storer and Arsenault 1987).  Total xylenes
were detected  in the same  area  during the present study in a  cross-waterway
                                     153

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           LEGEND
•  CHAPMAN ETAL. (1984)
0  C REG ELIUS ET AL. (1984)
V  BATTELLE(1986)
T  U.S. EPA (1982)
A  MALINS ETAL. (1982)
A  MALINS ETAL (1985)
O  ANDERSON AND CRECELIUS (1985)
•  STORER AND ARSENAULT (1987)
3  U.S. ARMY CORPS OF ENGINEERS (1985)
•  THIS STUDY


              PCBs
 Designation
   Number
(dry weight)
                   > 1,000
                   > 500 - 1,000
                   >100-500
                   undetected - 100
           Figure 35.  Contours of PCS concentrations in East Waterway
                        sediments.
                                         154

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transect composed  of  Stations EW-07, EW-08, and  EW-09  (16 to 39 ug/kg  DW).
Other  volatile  organic  compounds  were  detected  at  the two  stations  from
Storer  and Arsenault  (1987)  (e.g.,  trichloroethene  at  400  ug/kg  DW  and
60 ug/kg DW at  Stations  PS05 and  PS06,  respectively;  acetone, at 2,800  and
910 ug/kg  DW at  Stations PS05 and  PS06,  respectively).  Blank contamination
by acetone, a common laboratory contaminant, is not documented in Storer  and
Arsenault  (1987).
Summary
          The  East  Waterway was  clearly the most  contaminated of all
          study  areas.    The highest  concentrations  of  virtually all
          chemicals measured in the study occurred at  stations in the
          East Waterway (e.g., Stations EW-01, EW-04,  EW-07, EW-13, and
          EW-14, all  along  the east shore).  The  predominance of East
          Waterway  contamination  relative  to other areas  is   apparent
          from  the  summary  information in Table 21,  in which   stations
          are  characterized  by  90th  percentile  exceedances  for  a
          diverse range  of  chemicals. .  More moderate  contamination in
          terms  of  concentrations   and   complexity   of  contaminant
          assemblages  was  observed  in   offshore   and  nearshore  Port
          Gardner study  areas  (i.e.,  Areas  OG  and NG)  and  at  other
          relatively  isolated  stations   (e.g.,  Station  SR-05  in the
          Snohomish River).

          Organic   compounds  were  much  more  widely  distributed  at
          elevated  concentrations  than   metals.    Among  the  organic
          compounds with the highest detection frequencies  and  reported
          at  the highest concentrations  were 4-methylphenol   (maximum
          concentration  =  98,000 ug/kg  DW;  EAR=7,500),  dehydroabietic
          acid  (maximum  concentration =  83,000  ug/kg  DW;  EAR=1,300),
          abietic   acid  (maximum  concentration  =  98,000  ug/kg DW;
          EAR=650),  PAH  (naphthalene  in  particular; maximum concentra-
          tion  = 17,000  ug/kg  DW;  EAR=3,000),  and several  tentatively
          identified  organic  compounds   (most  notably,  a  diterpenoid
          hydrocarbon thought to be dehydroabietane; maximum concentra-
                                    155

-------
ES-01
SD-03
                                  TABLE 21.   NUMBER OF CHEMICALS  OF CONCERN  EXCEEDING
                                            90TH PERCENTILE CONCENTRATIONS*


Station
Miscellaneous
Resin Phenols/ PCBs/ Extractables/
Metals PAH" Acids Guaiacols Pesticides TIO Compounds
Nitrogen-
Containing
Phthalates Compounds
Volatile
Organic
Compounds
EW-01
EW-02
EW-03
EW-04
EW-05
EW-07
EW-08
EW-10
EW-11
EW-12
EW-13
EW-14
EW-15
N6-01
NG-03
NG-04
NG-05
NG-07
NG-08
KG-09
NG-11
NG-14
NG-15
OG-03
OG-06
3 1


4 16 6

592

4 2
1

4 16 3
6 17
2






9
10

1


8
4
1
8
1
3

2


2
1







1





4


1 14

1 6

6
6
1
7
6
2
1
1
1
1
1
1
1 2
1
1

1
1
1 1


1
1
1
1
1


1
1









1



SR-05
SR-07
SS-01
a Stations not shown  did not have  any chemicals exceeding  90th  percentile concentrations.  Chemicals exceeding  90th
percentile concentrations but not exceeding Puget Sound reference area concentrations were not included.  Chemicals included
in each  group  are  listed  in  Tables  14 and 17.

  Includes LPAH and  HPAH  as  groups  as well  as  individual  PAH.
                                                       156

-------
          tion =  23,000;  EAR>1,000).   Other organic compounds occurred
          at high concentrations at relatively isolated stations  [e.g.,
          PCBs (maximum  concentration)  = 9,600  ug/kg  DW (EAR=1,600)].
          All  of the  compounds  mentioned  above  occurred  at  maximum
          concentrations  along  the  east  shore  of the  East Waterway.
          Metals  concentrations  were  highly  elevated  at  a   single
          station in  the study  (Station  EW-14 in  the  East Waterway),
          particularly  for  zinc  (5,910  mg/kg   DW;  EAR=310),   copper
          (1,010  mg/kg  DW;  EAR=160),  and  arsenic  (685  mg/kg  DW;
          EAR=200).   Outside the East Waterway, 4-methylphenol was most
          elevated over the widest area of any measured chemical.

     •    Historical sediment  chemistry data  generally  supported  the
          findings of  the  present  study,  although considerable spatial
          heterogeneity  was apparent  for  HPAH  and PCBs in the East
          Waterway.     Notably,  available  historical   studies  did  not
          provide data  for the organic compounds  found  at  the highest
        •  concentrations  in the  present  study   (.especially 4-methyl-
          phenol,  -dehydroabietic   acid,  and  abietic   acid)   or  for
          distinctive geochemical tracers of the  pulp industry observed
          in the  present study  (especially chlorinated  derivatives of
          compounds  occurring  in  coniferous woods, such as chlorinated
          resin acids and chlorinated guaiacols).

BIOACCUMULATION

     Bioaccumulation  studies  were   conducted -to  determine  if  selected
contaminants were accumulated  in the  tissues  of  indigenous  organisms in the
Everett Harbor study  area.  The  contaminants selected  for  analysis  (PCBs,
mercury, and 12 chlorinated  pesticides) have  a high potential  for accumula-
tion  in  higher organisms  such as  fishes  and crabs.    Previous  studies in
Everett  Harbor have  also  indicated  that  PCBs  may  be bioaccumulated at
concentrations exceeding reference  levels.    The  objective of  the present
study  was   to  describe  the geographic  trends  in  bioaccumulation  and to
determine whether tissue contaminants  in the  Everett Harbor study area  were
elevated above concentrations observed at the Port Susan reference area.
                                    157

-------
Mercury In Dunoeness Crabs

     Mercury  concentrations  in  edible muscle  tissue  of  Dungeness  crabs
(Cancer macn'ster) are presented in Figure 36.   In general, mercury concentra-
tions were relatively homogeneous and low throughout the study area, ranging
from  0.042  to 0.130  mg/kg wet  weight.  Although  tissue  concentrations  in
crabs from the East Waterway and  Port Gardner  shoreline were slightly higher
than  at the Port Susan reference  area,  the maximum elevation above  reference
was  only  2.0 at Station  EW-92.  Crabs from  the lower  Snohomish  River and
Snohomish  River  Delta areas  had slightly  lower mercury  levels  than crabs
from  the  reference area.    Because sampling was   not  replicated  at   each
station,  tests  of the statistical  significance  of  the observed differences
were  not  performed.

PCBs  and  Pesticides in Dunqeness  Crabs

      All  12 pesticides measured were undetected  in the crab  samples  from the
Everett  Harbor study  area;.   Detection limits for  these  substances ranged
from  0.1  to 0.8 ug/kg wet  weight.

      PCB  concentrations   in  Dungeness  crabs  from the  Everett  Harbor study
area  are  presented  in  Figure 36.  PCBs were detected  in crab muscle samples
from  all  stations  except  SD-91.   Because of  low analytical recoveries  (see
Bioaccumulation,  Quality  Assurance/Quality  Control  Results  in  Methods
section),  all  PCB data are considered potential  underestimates of actual PCB
levels.    In  addition,  the crab tissue  data were  not  replicated at any
station except EW-91.  Because of these limitations,  no  statistical  analyses
were  conducted to  determine among-station differences.   Instead,   the  data
are  used  only  for relative comparisons  of  PCB  levels  among  sampling sites.

      The  highest  average  PCB  level  measured  in  crabs (24  ug/kg wet weight)
was  4.7  times higher  than the reference  level  and was measured at Station
NG-92 near Mukilteo.   Lower PCB  concentrations  (i.e., 0.7 to 2.4  times the
reference level) were  measured along the south Port  Gardner shoreline  and  in
the  lower Snohomish River.  Crabs  collected  from the three Snohomish  River
delta sites  had PCB concentrations equal to or less than the reference  level.
                                     158

-------
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                                  STATIONS







                               LEGEND
                        P S   Port Susan
                        NG   Nearshore Port Gardner
                        EW   East Waterway
                        S 0   Snohomish River Delta
                        S R   Snohomish River
  Figure 36.  Concentrations of RGBs and mercury in Dungeness
               crab muscle tissue samples from Everett Harbor and
               Port Susan.
                               159

-------
     As discussed  in the Methods section,  the  PCB tissue data did not meet
the minimum  50 percent  surrogate  recovery levels  specified  by PSEP  (Tetra
Tech 1986g).  Recovery of a surrogate compound  (DBOFB) can be  used, however,
to calculate  an estimated  PCB concentration that may be more  representative
of  actual  PCB  levels than  the low-recovery  measurements for  this   study.
Although a single surrogate compound cannot accurately represent recovery of
all  209 possible  PCB  congeners,  previous  performance  tests  performed  by
Battene  (PTI and  Tetra Tech  1988)  indicated  that DBOFB  recoveries were
similar to  overall  recoveries  of  spiked PCB mixtures.   For Station  NG-92,
the DBOFB  recovery was  36  percent,  resulting  in  a theoretical maximum PCB
concentration  in crabs  of  67  ug/kg wet weight  (i.e., 2.78 X 24 ug/kg).  The
corresponding  reference  level in crabs  corrected  for  DBOFB  recovery  was 18
ug/kg  wet  weight.    Similar  applications  of  surrogate  recovery corrections
for the other sampling stations  did not  result  in  any calculated average PCB
levels  exceeding 61 ug/kg wet weight.   Therefore, using this approach, the
maximum calculated  EAR for  PCBs  in crab  tissue  is  3.7 at Station NG-92.

Mercury, in English  So^le

     Mercury  concentrations  in  English  sole  (Parophrvs vetulus)  edible
muscle tissue  from  Everett  Harbor  are  presented in Figure 37.   In general,
mercury  concentrations  were  relatively homogeneous  throughout   the  study
area.   The  highest  average  mercury  levels  (0.067 mg/kg wet  weight)  were
measured at  the  Port Susan reference area.   Mean concentrations of mercury
in English sole samples  from  Everett Harbor ranged  from 0.010 to 0.062 mg/kg
wet  weight,   with  no  evidence  of  mercury bioaccumulation  above  reference
levels.

     The  relationship   between  mercury  concentrations   and  muscle  lipid
content was   examined to  determine  if  differences in  lipid  content were
influencing  the  bioaccumulation results.   These  analyses showed  a statis-
tically significant negative correlation  between  total  extractable organic
matter  (a  measure  of  lipid  content)   and mercury  concentration   (r=-0.34,
n=54,  P<0.01).  Thus, fish with higher  lipid  contents  tended to have lower
mercury levels.  The lipid content of  English  sole from the reference area
(8.6 mg/kg  wet weight)  was  intermediate in  the  range  of  values  for the
Everett Harbor  area (6.7 to  15  mg/kg wet weight).  Based on the  relatively

                                    160

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                               LEGEND

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Port Susan
Nearshore Port Gardner
East Waterway
Snohomish River Delta
Snohomish River
 Figure 37.  Concentrations of PCBs and mercury in English

             sole muscle tissue samples from Everett Harbor and
             Port Susan.
                            161

-------
low correlation of  these  variables,  the relatively constant mercury concen-
trations, and  the  intermediate lipid levels at  the reference site, it does
not appear  that  major differences in mercury  concentrations among sampling
stations are due to differences in lipid content.

PCBs and Pesticides in English Sole

     None of the 12 pesticides measured were detected in any of the English
sole tissue samples.   The detection  limits ranged from 0.1 to 0.8 ug/kg wet
weight for these analyses.

     PCB concentrations in  English  sole muscle tissue samples are presented
in Figure 37.  The  mean PCB concentrations (as averages for five individual
fish)  ranged from a minimum of 8.3 ug/kg wet weight at the reference site to
a maximum  of 43  ug/kg wet  weight at Station NG-92 near Mukilteo.   The EAR
for measured concentrations ranged from 1.3 on the Snohomish Delta to 5.1 at
Mukilteo.   Overall,  the  maximum  value  for an  individual  fish (99 ug/kg wet
weight) was  measured  in  the  lower  Snohomish River.   PCBs  were  detected in
all but two of the individual  samples analyzed (detection limit of 3.5 ug/kg
wet weight).

     The  PCB  data  for  English  sole  were  characterized  by  the  same  low
surrogate  recoveries  as   the crab  data.   The  data  should therefore  be
considered  as  potential underestimates  of actual  PCB  levels.   The surrogate
recoveries were relatively  consistent among sampling  sites  (most were 25 to
36 percent).   Therefore,  the  data are  probably  accurate representations of
the relative  magnitudes  of PCB tissue  concentrations  among sampling sites.
For Station SR-92,  the average DBOFB recovery was 26 percent, resulting in a
theoretical  maximum  PCB   concentration  in  fish  tissue  at this  sampling
station of  130 ug/kg  wet  weight  (i.e.,  3.85 x 34 ug/kg).  The corresponding
reference  level  in   sole  corrected  for   DBOFB  recovery was  35  ug/kg  wet
weight.   Similar  applications of  surrogate  recovery corrections  for  the
other sampling stations did  not result  in any calculated average PCB levels
exceeding 120  ug/kg wet weight.   Therefore, using this corrective approach,
the maximum calculated EAR for PCBs in fish muscle tissue was 3.7 at Station
SR-92.
                                    162

-------
     There was  no statistically significant  correlation  between the muscle
lipid  content  of  English  sole  and  tissue  concentration of  PCBs  (r=0.21,
n=54, P>0.05).  The  concentrations of  total  extractable organic matter were
also similar  between the reference  site  (8.6 mg/g wet weight) and Station
SR-92  (9.6 mg/g  wet  weight).   Therefore,  it  does  not  appear  that  any
differences in  lipid content  were  influencing apparent  differences in  PCS
levels among sampling sites.

Comparison with Recent Historical Data

     Historical data on bioaccumulation in fishes and crabs from the Everett
Harbor study area are very limited.   The only available data on bioaccumula-
tion  in  English  sole  muscle  tissue are  in  Cunningham  (10  November 1982,
personal  communication).   In  this  study,  PCB  levels  in English sole muscle
tissue ranged  from  49  to  190 ug/kg  wet  weight  in  samples from  the  East
Waterway, Snohomish River, and Gedney Island.  The maximum concentration was
measured in a  sample from the  Snohomish  River.   The PCB data are similar to
the  PCB  levels measured  in  the present  study,  especially when  the latter
data  are corrected  for  low surrogate recoveries.   The maximum  PCB level
measured was  slightly  higher than the maximum  theoretical  level calculated
for  this study (130  ug/kg  wet  weight)  (Cunningham,  D.,  10  November 1982,
personal  communication).
Summary
          For  both  Dungeness crabs  and  English  sole,  none of  the 12
          measured  pesticides were  detected  in  edible  muscle  tissue
          from the Everett Harbor study area.

          Mercury concentrations in edible muscle tissue from Dungeness
          crabs  and  English  sole  from the  Everett Harbor  study area
          were  similar  to,  or  less  than,  mercury  levels  in organisms
          from the Port Susan reference area.

          Interpretation  of  PCB  data was   limited  by  low  analytical
          recoveries.   Measured  PCB  levels were generally higher in
                                    163

-------
          Dungeness crabs  and  English  sole from the Mukilteo area, the
          Snohomish River, and the East Waterway than in the Port  Susan
          reference area.   However,  the maximum theoretical concentra-
          tions of  PCBs  (after adjustment for surrogate recoveries) in
          crab and  fish  samples were  not elevated substantially  above
          the reference area levels  (i.e., maximum EAR of 3.7) and were
          low when compared to other urban embayments in Puget Sound.

     •    PCB  levels  measured  in. crabs  and  fish  in  this  study  were
          similar  to  levels measured   in  a  previous study  in  Everett
          Harbor.

SEDIMENT BIOASSAYS

     The results  of sediment toxicity  tests  using  the  amphipod Rhepoxvnius
abronius are  presented  in this  section (see Appendix D  for data  listing).
First, amphipod  bioassay results for  Port Susan are compared  with  results
from  other  reference  areas used  during  previous  studies.    The amphipod
mortality values  for each station  in the Everett  Harbor system 'are then
presented and  compared  statistically with the  Port Susan  values.   Finally,
results of the present study are compared with  those of previous studies on
the toxicity of Everett Harbor sediments to R. abronius.

Evaluation of the Reference Area

     Mean values of amphipod survival  and  their 95 percent confidence  limits
are  shown  in  Figure  38  for  individual  stations  in Port  Susan  and  other
reference areas  of Puget  Sound.   Data for the 1985 survey of  Port   Susan,
which were collected  as  part of the Elliott  Bay Toxics  Action  Program,  are
also  shown  in  the  figure.   Mean amphipod survival for several  of the Port
Susan observations  was   low  (<80 percent)  relative  to  data for most  other
reference areas.   Mean survival was also  low  (<75 percent) at one  station in
Carr  Inlet,  where  a  single replicate was an  extreme  outlier, and  at  one
station  in  Sequim  Bay.    The  relatively  low survival  at  some Port  Susan
stations cannot be  explained by  a  response of the amphipods to fine-grained
sediments.    The  product-moment  correlation  between mean  amphipod survival
                                    164

-------
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1986
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            Figure 38.  Amphipod bioassay data from Puget Sound reference areas.

-------
and percent fine-grained material at Port Susan stations was not significant
(r=0.38,  n=7,   P>0.05).    The  range  of  percent  fine-grained  material   in
samples collected during 1985-1986 in  Port Susan was 7.4-88 percent.  Only  a
single  sample   contained   more  than   24  percent  fine-grained  material.
Moreover,  mean  amphipod  survival for  that sample  (Station PS-01,  1985) was
relatively high  (87 percent).

     The 1986 data for amphipod  response to Port Susan sediments include one
station (PS-02) where mean survival  (71 percent) indicated that the sediment
was toxic based on a toxicity threshold value  (i.e., survival <76.4 percent)
derived in an  extensive  interlaboratory  comparison by Mearns et al.  (1986).
Consequently,  the  1986  data from this station were unacceptable for use as
reference data  and  were excluded from further analyses.   The 1986 data for
amphipod  response  to Port  Susan sediments  at  Stations  PS-03  and  PS-04 are
considered marginally adequate  for use as reference data.  The mean survival
of amphipods exposed  to sediments collected from  these  two stations during
1986  was  78  percent. "  Nevertheless,  Everett Harbor  sites  were compared
statistically  with  Port Susan  rather  than  the West  Beach (Whidbey  Island)
control site because the latter  is the natural  habitat of the amphipods used
in this study.   Use  of  a separate reference area  (Port Susan) minimizes the
possible  bias  due  simply to  removal of  amphipods  from their native  habitat
and placement  in a  non-native sediment.   Moreover, Port Susan appears to be
an adequate  reference area based on data for  other indicators (see  results
for sediment  chemistry,  bioaccumulation, benthic  infauna,  and fish  pathol-
ogy).    Contaminant  concentrations in  sediments at Stations  PS-03  and PS-04
were typically within the range of those  observed  at other  reference areas in
Puget  Sound  and were low  relative  to Puget Sound AET  (see above, Sediment
Chemistry).  Therefore,  the 1986  bioassay data  from Stations PS-03 and PS-04
were  used  for  statistical  comparisons with  data  from  sites  in  the  Everett
Harbor system.

General Patterns of Amohipod Mortality

     The mean amphipod mortality  and the range  of  station-specific means for
each  study  area within  the  Everett  Harbor  system and the  reference area
(1986) are shown in Figure 39.   The highest overall  mortalities were found
                                     166

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-------
in  the  East  Waterway  (mean  mortality  = 63  percent).    Total  mortality
(100 percent)  was  observed  at Stations EW-01 and  NG-04.   The range of mean
mortality at  stations within  the  East Waterway and  Nearshore Port Gardner
study  areas  (the  most  intensively  sampled  areas)  was  large,   indicating
considerable spatial  heterogeneity.  Some stations  within  each  area exhibited
mean mortality values  less than or equal to the  values for Stations PS-03 and
PS-04 in Port  Susan.

Comparison of  the  Everett Harbor System with Port  Susan

     Results of the  amphipod  bioassay tests for all stations sampled during
the  Everett  Harbor investigation  are summarized   in  Table  22.   Statistical
comparisons between  Everett Harbor sites  and  the  reference area (Port Susan
1986, Stations PS-03  and PS-04 pooled)  indicated  that mean mortalities for
four test sediments were significantly different from  the Port.Susan samples
(P<0.001).   Three  of  these  toxic  sediments were from the East Waterway; one
was  from Nearshore  Port Gardner  near  the defense  fuel  storage depot  at
Mukilteo (Figure 40).

     At three  of the seven stations that exhibited  a mean amphipod mortality
>40  percent,  mean  mortality  was  not  statistically different  from the mean
reference  value at  PO.001.    However,  these  stations  (EW-10,  NG-06,  and
OG-03)  did  exhibit  a  significant difference  from  the  reference  area  at
PO.05.  The  lack  of significance  at  PO.001  for mean mortality values over
40 percent at  some stations can be explained by  low statistical power, partly
due to the  relatively  high  mean mortality in  the  reference area.  Also, the
variance of  the bioassay test is  typically higher  at  intermediate mortality
values  (35-65  percent) compared with the extremes of the mortality range.
The variance of the mean was very  high [standard deviation >28, corresponding
to  a standard error >12]  at three  stations:   Stations  EW-10,  OG-03,  and
SR-07.  The relative influence  of  reference mortality  vs. variability on the
statistical  power of the  amphipod  bioassay   is   being  investigated  in   a
separate EPA project on  refinement of sediment  quality  values.
                                     168

-------
                 TABLE  22.   SUMMARY OF AMPHIPOD BIOASSAY RESULTS
Station
ES-01
ES-02
ES-03
EW-01
EW-04
EW-07
EW-10
EW-12
EW-14
NG-01
N6-02
NG-03
NG-04
NG-06
NG-10
NG-12
NG-13
NG-14
NG-15
Range of
Mortality
(percent)
0-20
5-25
0-25
100B
95-100
60-100
10-100
10-20
15-55
0-10
0-15
5-15
100B
25-55
0-10
0-10
0-10
0-10
0-5
Mean
Mortality3
(percent)
10(4.2)
12(3.7)
15(4.2)
100(0)*
99(1.0)*
75(8.4)*
55(19)
13(2.0)
37(7.2)
5(1-6)
6(2.4)
13(2.0)
100(0)*
43(5.6)
5(1.6)
2(2.0)
6(1.9)
5(2.2)
1(1.0)
     OG-03
15-90
58(12)
PS-02
PS-03
PS-04
SD-01
S'D-02
SR-01
SR-02
SR-04
SR-07
SR-08
SS-01
SS-03
Control0 A
Control B
Control C
Control 0
20-40
15-40
5-35
5-20 .
15-50
0-35
0-10
15-30
0-80
0-30
0-10
0-10
0-10
0-25
5-15
0-10
29(4.0)
24(4.6)
20(6.3)
15(3.2)
29(7.0)
12(6.0)
4(1.9)
21(2.9)
33(13)
15(5.7)
5(2.2)
6(2.4)
5(2.2)
10(4.2)
9(1.9)
4(1.9)

a Mean mortality  is  based on  five  replicate  samples per  station.   Standard  error
of each mean is given in parentheses.

° A mortality level  of 100  percent  was  observed  for each  of  the  five  replicates.

c Clean control sediments from the  amphipod collection site at West Beach,  Whidbey
Island.
*
  Asterisk denotes that  mean  mortality differed significantly (P<0.001)  from the
mean mortality  of pooled replicates from two Port Susan stations  (PS-03  and PS-
04).
                                   169

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          E W  EAST WATERWAY

          N G  NEARSHORE PORT GARDNER
Figure 40.  Significant (P < 0.001) amphipod bioassay mortalities
          compared to the Port Susan reference area.
 170

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Comparison with Recent Historical Data

     There are no R. abronius sediment bioassay test data for Everett  Harbor
in the  Puget Sound  Environmental  Atlas  (Evans-Hamilton  and D.  R. Systems
1987).    Amphipod  bioassay  data  from  previous  tests  of Everett   Harbor
sediments-were summarized  by Long (unpublished).   However,  these data were
obtained  from  tests that deviated substantially  from  PSEP protocols  (Tetra
Tech and  E.V.S. Consultants  1986).   Either the sediments were stored  frozen
before being tested  or,  in one  case  (i.e., Battelle Northwest 1986),  tested
without replication.

     The  results  of unreplicated  amphipod bioassays  must be   interpreted
cautiously.  However, it should  be  noted that  the Battelle Northwest  (1986)
data  support  the  results  of the present  study.   The  highest  toxicity was
recorded  in the East Waterway near  a station  where significant toxicity was
found  in  the  present  study.    No   historical  data are  available  for the
Mukilteo  area,  where significant toxicity was  found  in the  present  study
(i.e., Station NG-04).

     The  U.S.   Army COE   (1985)  tested  composite  samples from  the East
Waterway and found relatively high toxicity in these sediments.   Because the
sediments were composited,  the magnitude of toxicity at specific  stations is
unknown.
Summary
          Sediments  from 4  of  the  29  Everett Harbor  stations tested
          displayed  significant  toxicities  (P<0.001)  in  the amphipod
          bioassay  when  compared  with  the  Port  Susan  reference  area
          (Figure 40) (Table 22)

          Although  previous  data  are limited,  there was good agreement
          between the  present study  and  results of  previous amphipod
          bioassays in Everett Harbor
                                    171

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     •    The most toxic  area  in  Everett  Harbor was the East Waterway.
          Significant  toxicity  was  also   found  at  one  station  near
          Mukilteo (Station NG-04).

BENTHIC MACROINVERTEBRATES

     The purposes of this section are to describe the general characteristics
of benthic communities  in Everett Harbor  and the Port Susan reference area,
and to  identify areas  where  benthic communities may  be impacted.   Charac-
terization of the  benthic communities within Everett  Harbor is based on the
abundance  and  distribution  of  individual  taxa   and  the  major  infaunal
taxonomic groups (i.e.,  polychaetes, pelecypods,  gastropods and crustaceans).
Identification  of potentially  impacted  areas  is  based on comparisons  of
benthic  community  indices among  Port Susan and  Everett  Harbor  stations
including  major  taxa  abundance,  species   richness,  abundance of  dominant
taxa, pollution-tolerant or opportunistic  taxa,  and  similarity  of  species
distributions.

     The  following  discussion  is  organized  into  several  major  topics.
First,  the  adequacy of  the   reference  area  (Port   Susan)  is  evaluated.
Second,   the  general  characteristics  of infaunal  communities within  Everett
Harbor  and  in Port  Susan are  described,  and abundances of major taxonomic
groups  are  compared statistically  to identify  areas  of  impact.    Third,
species  level  data  are  used  to  characterize  each station and  refine  the
identification  of the  type  of  stress that may  be   impacting the  benthic
community.   Individual  stations or  areas within Everett Harbor  that appear
to be degraded and the degree of the apparent degradation are then discussed.
Finally, comparisons are  made with historical data.

Evaluation of the Reference Area

     The ideal reference  area for  any  investigation of anthropogenic effects
would be identical  to  the  potentially impacted  area,  but would  lack  all
anthropogenic influences.   This condition  is not  achievable because no two
areas are exactly  alike  naturally,  and  because   most  areas exhibit  some
evidence of human activities.   Nevertheless,  a reference area should possess
                                    172

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as many characteristics  in  common  with  the study area as possible, with the
exception of  anthropogenic  impacts,  to allow  unbiased  comparisons between
areas.  In this investigation, Port Susan was selected as the reference area
for benthic  communities  in Everett Harbor  based the following characteris-
tics:

     •    It  has   a  major  riverine  input  (i.e.  Stillaguamish  River)
          similar to that of the Snohomish River in Everett Harbor

     •    It  does  not have any major  sources  of  contamination  other
          than possible slight organic enrichment from the Stillaguamish
          River

     •    It  exhibits  a  range of sediment grain  sizes  similar to most
          stations sampled  in Everett Harbor

     •    It  is adjacent to the Everett Harbor study area and is likely
          to  share similar benthic fauna and physical influences  (e.g.
          currents, weather patterns). .

     Port Susan  is an extremely  productive estuary, indicating  that  ample
sources of nutrients are- available to support  the biota.  The Stillaguamish
River may potentially  be a source  of nutrient  enrichment  in  Port Susan,  as
much of the  river's watershed  is  agricultural.    However,  the sediment data
collected during both  the 1985 Elliott  Bay  investigation  (where  Port  Susan
was used  as  the  reference area)  and  this survey  do not  show evidence  of
organic enrichment in Port Susan.

     Grain-size characteristics  of the  sediments at  stations  in  Port  Susan
appear to have been  affected  slightly  by their distance  from  the  mouth  of
the Stillaguamish  River.   Station  PS-04 (furthest  from  the  river mouth)
consisted of  coarse  sandy sediments,  whereas Station PS-02 (closest to the
river mouth)  consisted  of fine  sandy  sediments  (see  Appendix  E).   Other
conventional  sediment variables (i.e., nitrogen, total organic carbon, total
solids)  also  exhibited slight gradients in relation to the distance from the
river (see Appendix E).
                                    173

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     Sediments  at stations  sampled  in  other  selected reference  areas  in
Puget Sound are also predominantly sandy (Table 23).  Mean concentrations  of
total organic carbon,  sulfides,  and  total  solids  at the Port Susan stations
were  similar  to  those documented  in the  other  reference  areas  listed  in
Table 23, and appear to be typical of unimpacted areas.

     Abundances  of the  major benthic  taxonomic  groups  at  the  Port Susan
stations were  also similar to  those in other  reference  areas  within Puget
Sound.  Mean total abundances and mean  abundances  of polychaetes, molluscs,
and  crustaceans  were  generally similar to  mean abundances  observed in Carr
Inlet,  Blakely  Harbor,  Central  Puget Sound  (15-22 m depths),   and  at Port
Susan stations sampled in 1985  (Figure 41).

     Comparisons  of mean total  abundances  and mean  abundances  of the major
benthic macroinvertebrate  taxa groups in  Port  Susan between 1985  and 1986
revealed differences between  years  (Figure  41).  Mean total  abundances were
significantly  (P<0.05)   lower  in samples  collected tn 1986 than  in  1985.
Mean  abundances  among  the   major  taxonomic  groups  were   lower  in  1986,
reflecting  the  decrease in  total  abundance,  but  the differences  between
years were  not  statistically significant   (P>0.05)  for any  major taxonomic
group.

     Examination  of  the  five most  abundant  taxa  at  each   station  in Port
Susan indicated  that species  composition was  fairly similar both within and
between years  (Table  24).   Two to  four  species  at each station  were also
among the  abundant taxa  at   the  other  stations in  Port  Susan.   This high
degree  of  similarity  documents  that structurally  similar assemblages  of
benthic macroinvertebrates were  sampled  at  all  three stations  in Port Susan
in  1986,   and  suggests   that  those assemblages   were  temporally  stable.
Comparisons of  the five most  abundant  species at  the 1985 and  1986 Port
Susan stations with those at  the Carr Inlet stations reveals little similar-
ity  between these two areas  (Table  24).   This is  not unexpected, however,
because Port Susan and Carr  Inlet are located in  different  regions of Puget
Sound  and  exhibit   different  habitat  characteristics   (e.g.,  exposure,
freshwater input).
                                    174

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                   TABLE  23.   SURFACE  SEDIMENT  CHARACTERISTICS  AT  BENTHIC
                        INFAUNA  STATIONS  IN  PORT  SUSAN  COMPARED WITH
                           OTHER  REFERENCE  AREAS IN  PUGET  SOUND
Reference Area
Port Susan (1985)b
Port Susan (1986,
this study)
Carr Inletd
Blakely Harbor6
Central Puget^
Sound (Seahurst)
Samish Bay9
Case Inlet9
Sequim Bay9
Sediment
Type3
sand-
clayey silts
sand
sand
sand
sand
silty sand/
clayey silt
" sandy silt
sandy silt
Mean TOC
0.78
0.34
0.41
1.65
1.51
1.65
2.2
2.35
Mean Sulfide
(mg/kg)
22.8
Uc
2.3
-15
--
--
--
--
Mean Total Depth
Solids (%) Range (•
66.4 10-12
77.4 11-12
70.4 2-26
67.8 10-18
15-22
10-30
21-41
19-26

a Sediment type designations after Shephard (1954).

b Data from PTI and Tetra Tech (1988).

c Undetected at a detection limit of 6 mg/kg dry weight.

d Data from Tetra Tech (1985a).

e Data from Tetra Tech (1986d).

f Data from Word et al. (1984).

9 Data from Battelle (1986).
                                         175

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-------
                    TABLE 24.   NUMERICALLY  DOMINANT TAXA AT  PORT  SUSAN
                         STATIONS SAMPLED IN 1985 AND 1986, AND AT
                            CARR INLET STATIONS SAMPLED IN 1984
                              Port Susan 1985    Port Susan 1986      Carr Inlet 1984

                            PS1  PS2  PS3  PS4    PS2  PS3  PS4    CR11   CR12   CR13  CR1<

Protomedia prudens
Psephidia lordi
Terebellldes stroemi
Euphilomedes producta
Lumbrineris spp.
Axlnopsida sern'cata              •    •    •      •                      •     •
Lumbrineris luti                  •    »
Euphilomedes carcharodonta             •    •      •    •    »            •
Ampharete acutifrons                        •
Clinocardium nuttali                               •
Leitoscoloplos pugetensis                          •
Pectinaria qranulata                                    •    •
Macoma baltica                                          •
Pista spp.                                                   •
Leptochelia dubia                                                   •
Phvllochaetopterus prolifica                                        •
Prionospio steenstrupi                                              •     •     •
Qdostomia spp.                                                      •           •
Platynereis bicanaliculata                                          •
Amphioda urtica                                                            •
Scalibreqoma inflatum                                                           •    •
Mitre11 a gauldi                                                                 •
Macoma nasuta                                                                        •
Caprellidae                                                                          •
Caprella mendax                                                                      •
Spiophanes berkelvorum                                                               •
                                         177

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     Opportunistic  and  pollution-tolerant taxa  (as defined  by Pearson and
Rosenberg  1978)  constituted  an average  28.2 percent  of the  fauna  at the
stations in Port Susan  (Table 25).   In Carr  Inlet 21.8 percent of the  fauna
was represented by  those same  taxa.   Prionospio steenstruoi.  Macoma nasuta
and Euphilomedes  carcharodonta  constituted   most  of the  opportunistic and
pollution-tolerant  organisms  in Carr  Inlet,  accounting  for  14.7  percent of
the total   population.    .Euphilomedes  carcharodonta and  E.   producta  were
abundant at stations  in Port  Susan,  and accounted  for  nearly all  of the
opportunistic  and  pollution-tolerant taxa at those stations.   Euphilomedes
spp. are known to  increase  in abundance in  areas  where  slight to moderate
organic enrichment  has occurred  (Word  et al. 1977).   Because Euphilomedes
spp. are common in  areas of only moderate enrichment, these taxa may not be
a strong indicator  of  benthic community stress.   Therefore if abundances of
Euphilomedes  spp.  are not considered  in  the foregoing  calculations,  oppor-
tunistic  and  pollution-tolerant  organisms  would  have  constituted  <12.0
percent of  the benthic macroinvertebrates at  all stations in Port Susan, and
19.3  percent  of   the   benthic macroinvertebrates  in  Carr   Inlet.    Thus,
abundances  of  opportunistic  and pollution-tolerant  taxa  in  Port  Susan were
low, and appeared to be  comparable to Carr. Inlet.

     Overall,  the  foregoing  comparisons of  conditions in  Port Susan in 1986
with conditions in  other  reference areas  in  Puget Sound, and with Port Susan
in  1985, affirm  the adequacy  of  Port  Susan  as a reference area for benthic
macroinvertebrate   communities  in   Everett   Harbor.    Sediment  grain-size
characteristics,  the values  of other  conventional  sediment  variables, and
abundances  of the  major taxonomic  groups  of benthic  invertebrates  at the
three  Port  Susan  stations were similar to  those  in other reference areas.
The similarity between  the  numerically dominant  taxa collected at the three
Port Susan  stations sampled  in  both  1985  and  1986 further indicates that the
structure of the benthic  assemblages in Port  Susan may be temporally stable.
Finally, abundances of opportunistic and pollution-tolerant  taxa were  found
to be  low,   and comparable to  the Carr  Inlet  reference area.
                                     178

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               TABLE 25.  RELATIVE ABUNDANCES (PERCENT TOTAL FAUNA) OF
              OPPORTUNISTIC AND POLLUTION-TOLERANT TAXAJ* AT STATIONS  IN
                              PORT SUSAN AND CARR INLETb

Stations
Taxon
Euphilomedes carcharodonta (Os)^
Euphilomedes producta (Os)
Glvcinde picta (Po)
Gon.iada brunnea/maculata (Po)
Leitoscoloplos puqettensis (Po)
Macoma balthlca (Pe)
Macoma nasuta (Pe)
Mediomastus spp. (Po)
Nephtvs cornuta franclscana (Po)
Paraprionospio pinnata (Po)
Pn'onosplo steenstrupi (Po)
Scololplos armiger (Po)
Others
(No. of taxa)
Total
PS-02
8.3
1.3
0.0
0.3
5.3
1.6
0.0
0.5
0.0
0.0
0.3
0.5
0.7
(6)
18.8
PS-03
17.6
6.0
0.2
0.6
3.4
6.0
0.0
<0.1
0.0
0.0
0.5
0.1
0.3
(3)
34.7
PS-04
16.7
10.5
0.0
0.7
0.9
0.0
1.0
<0.1
0.0
0.0
0.7
O.I
0.9
(7)
31.4
Carr Inletc
2.9
0.1
0.5
0.1
1.6
0.2
3.2
1.6
0.7
0.7
8.6
0.0
1.9
(6).
21.8

a As defined by Word et al.  (1977), Pearson and Rosenberg (1978), and Word (1980).
b Data from Tetra Tech (1985a).
c Mean value of four stations.
d Os=0stracoda, Po=Polychaeta, Pe=Pelecypoda.
                                         179

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Justification of Use of Pooled Port Susan Data

     In this  study,  impacts to the benthos  were inferred using statistical
criteria to identify changes in the abundances of the major taxonomic groups
of benthic invertebrates.  When comparing benthic communities in potentially
impacted  areas  with  those  in  reference  areas, it  is  often  advisable to
stratify  between-station  comparisons  by habitat characteristics.   Because
sediment  grain  size  is  an  important  determinant  of  benthic  community
structure (Sanders 1960; Johnson 1971; Gray  1974; Fresi et al. 1983), it can
be used to define the strata.

     Sediments  in  Everett  Harbor exhibited  a  wide  variety  of  textural
characteristics, that ranged from  clayey silts  to coarse sands  (Figure 42).
In many  areas of Everett  Harbor,  the  sediments  showed  evidence  of anthro-
pogenic inputs, and  can  no longer  be considered representative  of "natural"
conditions.    Typically,  these  sediments  smelled  of  hydrogen sulfide  or
petroleum,  or both.   Wood chips  were common  in  the grab  samples,  as was
scrap metal,  oil droplets, and other debris.  Field notes indicate that over
                                             *
half the  stations  sampled in E.verett  Harbor exhibited  evidence of sediment
modification  (e.g.,  hydrogen  sulfide,  petroleum, foreign objects).   Largely
because  of   these  anthropogenic  modifications,  the  entire  spectrum  of
sediment characteristics in Everett Harbor is not present in Port Susan.

     The  previous  evaluation  of  Port  Susan as a  reference  area  and  an  a
priori  examination  of  the sediment  characteristics  and benthic  community
structure in  Everett Harbor indicated that:

     •    Total abundances and abundances of the major taxonomic groups
          of  benthic invertebrates  in  Port  Susan  were  comparable  to
          abundances  in  other reference  areas  in  Puget  Sound,  despite
          differences in species composition

     •    Species composition  among  Port Susan  stations was temporally
          stable between 1985 and  1986
                                     180

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                                    CLAY
SAND
SILT
          Figure 42.  Sediment grain size characteristics at benthic infauna
                     stations in Everett Harbor and Port Susan (1986).
                                    181

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     •    Species  composition   of   dominant  taxa  among  Port  Susan
          stations was very similar

     •    Sediment characteristics  among  the three Port Susan stations
          were very similar

     •    The  sediments  in Everett Harbor are  highly  modified  in many-
          cases, and  many  sediment  characteristics cannot be "matched"
          in Port Susan.

For these reasons,  data on abundances of  the  major taxonomic groups at the
three stations  in Port  Susan  were not stratified by habitat characteristics
prior to statistical testing.  Stratification of between-station comparisons
by sediment grain size would be  inconsistent because grain-size characteris-
tics cannot be matched in many of the paired comparisons.  Instead,  the data
were pooled,  such  that mean values of variables  at each station in Everett
Harbor were compared with mean values of variables across all three stations
in Port Susan.  Pooling the Port Susan data increased the.number of replicate
reference values used in each statistical test from 5 to 15.

Comparisons of Benthic Communities in Everett Harbor and Port Susan

    . Nineteen  benthic  stations  were  sampled  as  part of the  Everett Harbor
study.   Three stations were  located  in  the Port  Susan  reference area,  six
stations were  located  along the  South Port  Gardner shoreline,  six  stations
were located within the East Waterway, and two stations each were located in
the  Snohomish  River  and  delta  areas.   Species-level  identifications were
available for all stations.

Infaunal Abundance--

     A  total  of  62,419 individuals  were  collected  among  the  19  stations
sampled in 1986.  Abundances varied among the different areas, but tended to
be higher in the  East  Waterway  and  in South Port Gardner.  Total abundances
at the station in Port Susan were very similar to each other  and  ranged from
3,950 to 4,418/m2  (x=4,249/m2)   (Figure 43).   In contrast,  total abundances
                                    182

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                       25,000 -r-
C»
LO
                  04
                    E  20,000 --
                   UJ
                   o

                   <  15,000
                   o
                   Z
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Z

UJ
                       10,000  --
                        5,000  --
           -PREFERENCES

                AREA
0
                                               \
                                                                                                                    /
                              PS-02      PS-04       NG-02      NG-04      NG 10      EW-04     EW-10      EW-14      SD-02      SR-08

                                   PS-03      NG-01      NG-03      NG-06      EW-01      EW-07      EW-12      SD-01      SR-07
                                                                        STATIONS
                                                    Note: Numbers at lop of bars indicate numbers of significant depressions delected
                                                         in major laxa abundances relative to the Port Susan reference area.
                   Figure 43.   Mean number of individuals/m2 at each benthic station in Everett Harbor and
                                 Port Susan.

-------
at stations  in Everett  Harbor ranged  from 300  to  20,676/m2  (x=7,005/m2).
Hence, total infaunal abundances at the stations  in Everett Harbor were more
variable than total abundances at the stations  in Port Susan.

     Abundances of  the  major taxonomic groups  were  also highly variable  in
Everett  Harbor,  compared  with  those  in  Port  Susan   (see   Appendix  F).
Polychaete  abundances  ranged  from  1,002  to  2,152/m2 among the  Port Susan
stations, and from  10 to  14,462/m2 among the Everett  Harbor stations.  Total
crustacean  abundances   ranged  from  650 to  1,344/m2 among  the  Port Susan
stations,  and  from 16  to  10,644/m2  among  the  Everett  Harbor  stations.
Abundances  of other major taxonomic  groups  (i.e.  gastropods, pelecypods,
amphipods,  other  crustaceans,  echinoderms  and  miscellaneous taxa)  also
-showed similar  high degrees of variability in  Everett  Harbor.   Polychaetes
followed  by  pelecypods,  total  crustaceans,   and   crustaceans other  than
amphipods  were the most  abundant  major  taxonomic  groups  in  Port Susan,
whereas  total  crustaceans  followed  by polychaetes,  other crustaceans,  and
pelecypods were the most abundant major taxonomic  groups among the  Everett
Harbor stations (see Appendix  F).' Gastropods and echinoderms were very minor
contributors  (i.e., <5.0  percent) to species  richness and abundance at most
stations.

     Statistical  analyses of infaunal abundances  were conducted during this
study  to determine whether  any  of  the  differences in  abundances (i.e.,
enhancements  or  depressions) between the  Port  Susan  reference stations and
stations  in  Everett Harbor were significant.   Results  of the t-tests are
summarized in Table 26.   The relative degree of impact  at each test  station
was  estimated by  ranking stations  according to  the number  of significant
depressions  in the abundances  of  the following  major  taxonomic   groups:
polychaetes, total crustaceans, pelecypods  and gastropods.  (For a discussion
of  the  statistical  rationale,  see   Indices  for Decision  Criteria  below).
Among the 64 paired comparisons that  were  performed  (i.e.,  16 stations times
4 major taxonomic groups), 28 comparisons were not statistically significant,
18 comparisons  indicated  enhanced  abundances,  and  18  indicated depressed
abundances (Table  26).   In comparisons with the reference area, polychaetes
and  pelecypods   in  Everett   Harbor  most frequently   exhibited  depressed
abundances, whereas total Crustacea  in  Everett Harbor  most often exhibited
                                     184

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                    TABLE 26.  RESULTS OF PAIRWISE COMPARISON FOR
                   ABUNDANCE OF MAJOR TAXA BETWEEN THE PORT  SUSAN
                             AND EVERETT  HARBOR STATIONS*

Station
NG-01
NG-02
NG-03
NG-04
NG-06
NG-10
EW-01
EW-04
EW-07
EW-10
EW-12
EW-14
SD-01 '
SD-02
SR-07
SR-08
Total
Abundance
NSf
_d
+e
NS
+
NS
NS
+
_
NS
NS
NS
—
NS •
_
NS
Polychaetesb
NS
-
-
-
NS
+
_
+
_
+
NS
NS
_
NS
_
NS
Pelecypods^
NS
NS
+
+
+
+
_
-
-
-
NS
-
_
NS
_
-
Gastropods
NS
NS
+
+
+
+
„
NS
-
NS
+
NS
NS
NS
NS
NS
Total
Crustaceans'*
NS
NS
+
+
+
+
NS
NS
NS
NS
+
NS
NS
+
_
NS

a Significance  level  for  a single comparison of either depressions  or  enhancements
P<0.001.

b Used as index for decision criteria.

c NS = Not significant at  P<0.001.

d - = Abundance significantly depressed.

e + = Abundance significantly enhanced.
                                        185

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elevated  abundances.   Two  stations in  the  East Waterway  (i.e.,  EW-01 and
EW-07), Station SD-01 near the mouth of Ebey  Slough,  and Station  SR-07  in the
Snohomish River  exhibited the greatest number  of  depressions  (two or  three
out of four)  in  abundances  of the major taxonomic groups.  Four stations  in
South  Port  Gardner  exhibited  significant  (P<0.001)  elevations  in  the
abundances of  three or  four  major taxonomic groups  (i.e.,  Stations NG-03,
NG-04, NG-06, and NG-10).

Numbers of Taxa--

     A total  of 403  taxa were  collected  among the 19  stations  sampled  in
Everett Harbor and  Port  Susan.   Mean numbers of taxa per 0.1-m^ grab sample
varied considerably among those stations  (Figure 44).   At  stations in Port
Susan, mean  numbers of species  per  grab  varied from 47 to  63, and averaged
55.6.  In  Everett Harbor, mean numbers  of  species  per station  varied from 4
to 96.   The highest mean numbers  of species occurred in South Port Gardner
at  Stations  NG-06  and  NG-10  (96  and 81,  respectively).  The  lowest  mean
numbers of  species occurred  in  the East  Waterway  at  Stations EW-01,  EW-04
and  EW-07  (4, 16  and  16, respectively),  at Station  SD-01  in  the Snohomish
River  Delta  (9)  and  in  the Snohomish   River  at SR-07  (16).   Two or three
significant  depressions   of  major taxa  abundance  occurred  at each of the
stations  that exhibited low  numbers  of species,  with the  exception  of
Station  EW-04 where  only the abundance  of  pelecypods was depressed.   The
remaining  nine  stations  in  Everett  Harbor  (i.e.,  Stations  NG-01,  NG-02,
NG-03, NG-04,  EW-10,  EW-12,  EW-14,  SD-02,  and  SR-08) exhibited mean numbers
of species that were similar to  those  observed  in Port Susan:  31-60 species
per  grab  sample (Figure  44).   One  or no significant  depressions in  major
taxa abundances occurred  at each of these  stations.

Numerically Abundant Taxa--

     Relative  and  absolute  abundances  of the five numerically dominant taxa
at each station are summarized in Appendix G. Among  the Port Susan stations,
abundances and relative  abundances  of  the dominant taxa were  fairly consis-
tent.  They  ranged from  2,130 to  3,002/m2 and  from 53.9 to 67.9 percent  of
the  fauna,  respectively.   Species composition  of  the  dominant  taxa  among
                                    186

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00
               X
               U_Z
               00

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LJJ
100



 90



 80



 70



 60



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 0
               REFERENCED

                 AREA
                           PS-02       PS-04      HG-Q2      NQ-04      NQ-10      EW-04      EW-10      EW-14      SD-02      SR-08

                                 PS-03      NG-01       NQ-03      NG-06       EW-01      EW-07       EW-12      SD-01       SR-07
                                                                     STATIONS
                                                 Nole: Numbers at top of bars indicate numbers of significant depressions delected
                                                      in major laxa abundances relative to the Port Susan reference area.
                  Figure 44.  Mean numbers of benthic taxa (no./0.1  m2,) at stations in Everett Harbor and
                               Port Susan (1996).

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these stations was also similar.  Each station had at least two, and as many
as four  taxa in common  with each of  the  other stations.   Moreover,  at no
station did  a  single taxon  dominate the community, to the exclusion or near
exclusion of other taxa.

     Among the  Everett  Harbor stations,  relative abundances of the dominant
taxa ranged from 44 to 99 percent of total  infaunal abundances.  At 8 of the
16 stations  (i.e., Stations  NG-01, NG-02, NG-03, EW-01, EW-04, EW-10, EW-12,
and SD-01) the five numerically dominant taxa represented over 70 percent of
the total  abundance  at each  station (Figure  45).   High relative abundances
of  dominant taxa  often  indicate stressed  conditions.   As  less  tolerant
species  are eliminated  from  the habitat,  opportunistic species  fill  the
vacant niches,  often  achieving high  abundances  (Pearson and Rosenberg 1978;
Gray 1982).

     Numerically dominant  taxa averaged  2,567 individuals/m^ among the Port
Susan stations.  Abundances  of the numerically dominant taxa at most Everett
Harbor stations  were greater"than this average,  and  abundances at Stations
NG-03, NG-06,-. NG-10,  EW-04-,  EW-10,  and .EW-12  greatly exceeded  this  value
(Figure  45).   These stations  also  exhibited significant  enhancements  for
total  infaunal  abundance  and  several  major   taxonomic groups  including
pelecypods,  gastropods,  and  total  crustaceans.   Abundances of amphipods (as
a subgroup of crustaceans) were also enhanced significantly.

     Abundances  of  the numerically  dominant taxa  were  greatly  depressed
below the corresponding Port  Susan value at Stations EW-01, EW-07, SD-01 and
SR-07.  Total abundance per  station ranged from 300 to  1,162 individuals/m2-
Greatly  depressed  abundances often indicate  excessively  enriched sediments
or  the  presence of  toxic contaminants  or  both  (see  Pearson  and Rosenberg
1978; Carriker  et  al. 1982;  Wolfe et  al.  1982;  Dillon 1984; Bilyard 1987).
These four  stations  exhibited the highest  number of significant depressions
among the  Everett  Harbor  stations, with  three or four depressions occurring
at each station.

     Swartz's Dominance Index  (SDI) can be used as one  indicator of stressed
conditions due to organic enrichment.  The index is defined as the number of
                                     188

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CO
Ui
<
z

<
HI
o
oc
HI
D.
100



 90



 80



 70



 60



 50




 40



 30



 20



 10



  0
                           REFERENCE*-1

                              AREA     I  „    1
                                        1%
                                         //
                                                          1     0

                                                              7
                                                                                             /,
 0

y/
          PS-02    '  PS-04       NG-02      NG-04      NG-10      ' EW 04      EW-10      EW-14       SD-02

               PS-03       NG-01      NG-03      NG-06      EW-01      EW-07      EW-12      SD-01
                                                                   STATIONS
                                              Note: Numbers al lop at bars indicate numbers ol significant depressions delected
                                                   in major taxa abundances relative to the Port Susan reference area.
                                                                                                                      SR-08
                  Figure  45.  Relative abundances of the five numerically dominant taxa (as percent of total
                               fauna) at stations in Everett  Harbor and Port Susan (1986).

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dominant  taxa  that account  for  75 percent of  the total abundance.   A  low
index value  results when  a  few  taxa contribute most  of the individuals  in
the assemblage.  A high index value results from a highly diverse population
wherein  a limited  number  of taxa  do not  dominate  the  assemblage.   SDI
appears  to  be  less  indicative  of  contamination  by  toxic substances  or
physically  stressed conditions  in  the benthic  environment.    Under those
conditions,  abundances  are  often  depressed,   but   the diversity   of  the
community  is  less  disrupted.     Under  conditions  of  physical  stress  or
contamination  of the  sediments  by toxic  substances,  both  common  and rare
species often  exhibit reduced abundances, a condition that tends to maintain
the  species  distribution to  a  greater degree  than  under conditions  of
organic  enrichment (see  Bilyard  1987).   Under these  conditions,  a higher
index value may  be calculated, even though the  community is  stressed.

     Values  of  SDI  ranged from 7.4  to 11.8  among the  Port Susan  stations
(x=10.1).   In Everett  Harbor,  index values suggested  that  moderate stress
may be occurring at Stations NG-01, NG-02,  NG-03,  EW-12,  and  SD-01  (SDI=5.5,
4.2,  3.0,  5.9,   and   4.4,  respective-ly).    Values  of  SDI  indicated  that
Stations  EW-01,  EW-04;  and EW-10 were highly stressed  (SDI=1.5,  1.3,' and 2.1
respectively).   However,  index  values did  not  reflect the greatly depressed
abundances that  occurred  at Stations EW-07, SD-01,  and SR-07,  and  that may
be  indicative of  toxic  contamination  or  great  physical  stress.    The SDI
values  for all  Everett  Harbor  and  Port  Susan stations are summarized  in
Figure 46.

     An  analysis  of  species  composition  at   each  of  the  Everett  Harbor
stations  provided  further information  regarding  impacted  areas.   Taxonomic
composition  of  the  dominant species  differed  considerably within   Everett
Harbor  (see  Appendix G).   For example, nematodes,  Capitella  capitata. and
the crustacean Nebalia  spp.  were  among the dominant taxa at the stations  in
East Waterway.   No other  station in Everett Harbor or  Port Susan exhibited  a
similar  group  of  numerically dominant  taxa.    Sub-surface  deposit-feeding
nematodes and  capitellid  polychaetes  are known  to reach  very high abundances
in  organically  enriched  sediments,   often  to   the  exclusion of  other taxa
(Nichols  1977; Pearson  and Rosenberg 1978;  Van  Es et  al. 1980).  Nebalia spp.
are not  considered classic  indicators of  organic pollution,  yet  they are
                                     190

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<
X
<
DC
LU
ffi
18


16



14


12


10


 8



 6


 4



 2 4-
           : REFERENCE*-
              AREA
                                                                                                 
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found at high abundances at many East Waterway stations.  Field observations
made during other  benthic  surveys  in central  Puget Sound found that Nebalia
spp. only achieves  high  abundances  where wood chips or fibers contribute  to
composition of  the sediment (Word,   J.Q., 8 April  1988, personal communica-
tion).  Field observations made during  this study confirmed the association
of Nebalia spp. with wood  chips.  Station SR-07 was dominated by Tharvx spp.
and several species of capitellid polychaetes  (Heteromastus filibranchus and
Barantolla americana).   Tharvx spp. is  a surface deposit-feeding polychaete
(Fauchald  and  Jumars  1979) that was numerically  dominant  in many  of the
benthic  communities in  contaminated areas  of Elliott  Bay  and Commencement
Bay,  and  may  be  indicative of stressed conditions  (Tetra Tech  1985a).   In
summary,  the  identities of  the dominant taxa and  the  low total abundances
observed  at Stations  EW-01, EW-07,   and  SR-07  suggest  that the sediments  at
these stations are  highly  organically enriched, contaminated with toxins,  or
both.

     Total abundance was also depressed  at Station  SD-01, but two crustaceans
contributed greatly to the  total abundance (i.e., Archaeomvsis grebnitzkii
and Grandifoxus qrandis).   It  is reasonable to assume that these two species
of  crustaceans  are pollution-sensitive.   Species closely related  to each,
are either known to be pollution-sensitive, or are used as test organisms  in
water and  sediment toxicity bioassays tests.  Thus,  species  composition  of
the numerically dominant  taxa  indicates  that  some effect other than organic
enrichment  or  toxic  contamination   contributed  to the  low  total  abundance
recorded  at  this  station.   Field   observations suggest  that  swift currents
may cause great physical stress at  this  station.

     Relative  abundances  of  opportunistic  and pollution-tolerant  taxa (as
defined by Word  et al. 1977;  Pearson and  Rosenberg 1978;  Word 1980)  at the
16 Everett Harbor stations  and  the  three Port Susan stations further support
the conclusion  that benthic infaunal communities  at many  East Waterway and
some  other Everett Harbor  stations are  stressed.    Among  the  Port  Susan
stations,  relative  abundances of opportunistic  and pollution-tolerant taxa
averaged  28.2   percent of the  total  fauna.    The ostracods  Euphilomedes
carcharodonta  and  E.  producta constituted the  largest proportions  of the
opportunistic and  pollution-tolerant taxa  at  these stations.   Euphilomedes
                                     192

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spp:  are known  to  increase in  abundance  in  areas  where only  slight  to
moderate  organic enrichment  of  the ecosystem  is  occurring  (Word  et  al.
1977).   Within  Everett  Harbor,  9  of  the  16  stations  exhibited  relative
abundances  of opportunistic  and  pollution-tolerant  taxa  that  were  higher
than  those  at any  of  the Port Susan stations  (Figure 47,  see  also  Appen-
dix H).  Relative abundances of those taxa within Everett Harbor ranged  from
40.8  to  98.2  percent of the total  fauna.   Stations EW-01,  EW-04,  and EW-10
exhibited the highest  relative  abundances of  opportunistic  and pollution-
tolerant  taxa,  ranging  from  88.9 to 98.2  percent.    Two of  these  stations
(i.e., Stations  EW-01  and  EW-07)  also exhibited the greatest number of  sig-
nificant  depressions  in  the  abundances  of  the  major taxonomic  groups.
Moreover, Capitella capitata contributed  the  largest  proportion  of  oppor-
tunistic and  pollution-tolerant taxa at  all  three stations.  C.  capitata  is
a known  indicator of organically  enriched  conditions,  and is often  the  only
species  found in highly  stressed, organically enriched areas.

      Relative abundances of  opportunistic  and pollution-tolerant species  at
Stations NG-03, NG-04,  NG-06, NG-10  in South Port Gardner,  EW-12 in  the  East
Waterway, SD-01  and SR-08 in the Snohomish  Delta and  River ranged from 9.4
to  33.0  percent,  and  did  not  exceed the relative  abundances  of those  taxa
observed  at  the  Port  Susan  stations.    The most  common  opportunistic  or
pollution-tolerant  species at these  stations was Euphilomedes carcharodonta.
which was also relatively abundant at the Port Susan stations.

Classification Analyses

      Similarities between  station pairs  and  groups  of  stations based on the
Bray-Curtis Similarity  Index and normal  classification analysis are  shown  in
Figure  48.    Station   groups  were  determined  by  selecting  a  35  percent
similarity  value.    This level  of   similarity  separated  the  stations  into
three interpretable  groups with two  outliers.

     Group 1  included all three Port Susan stations, five South Port Gardner
stations  (i.e.,  Stations  NG-01,  NG-02, NG-03,  NG-04  and  NG-06),  and one
Snohomish  River  Delta  station,  Station  SD-02.    Results  of  the  normal
classification  analysis indicated  a high  degree  of  similarity  among the
                                    193

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UD
                 UL


                 UL

                 O
UJ
o

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z
               100
                r~
PS-03


PS-04


PS-02


NG-01


SD-02


NG-06


NG-03


NG-04


NG-02


EW-12


SR-08


EW-14


NG-10


SR-07


EW-04


EW-10


EW-07


EW-01


SD-01
          -I
         - O
          -El
         - O
                  90
                  T
80
        70
SIMILARITY (Percent)


  60      50      40
                                      30
                                     nr
 20
—r~
                                                                                   10
                NOTE: Station groups delineated by a similarity level of 35 percent are enumerated. Outliers are designated as "O"
Figure 48.   Results of a Q-mode classification analysis (Bray-Curtis similarity index, group
             average clustering strategy) using log-transformed [log(x+1)] abundances of
             the benthic infauna at stations in Everett Harbor and Port Susan  (1986).

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three  Port  Susan  stations  (56 percent).   All  other members  of this group
clustered at  least  50  percent similarity.   Stations PS-03  and PS-04 were
very  similar  to  one  another,  probably  due to  the similar  abundances  of
Euphilomedes  carcharodonta.   Pseohidia  lordi.   E.  oroducta.  and Pectinaria
oranulata that occurred at each station.  These taxa  were also  among the five
most abundant species at Port Susan stations.  Euphilomedes carcharodonta and
£.  lordi  were  common  to  all  nine  stations  in Group  1,   and Axinoosida
serricata.  E.  producta.  and  £. oranulata  were common to seven,  four,  and
three of the stations, respectively.  Sediments at the Port Susan stations in
Group  I  ranged  from coarse  to fine  sands.   The five  South  Port  Gardner
stations  in Group  I  and Station  SD-02  exhibited a  similar  range  of grain
sizes as observed  at the Port Susan stations.   TOC content of the sediments
was  low. among the  Port  Susan stations,  ranging  from 0.26  to 0.40 percent.
Sediments at  the  remaining  stations  in  this  group  exhibited  TOC  contents
similar  to  those  at  the Port  Susan  stations  (i.e.,   0.18-0.54  percent).
Among  the  Everett  Harbor stations in  this group, all  exhibited  either  no
significant depressions  of  major   taxa  abundance,  or only  one significant
depression  in the  abundance of polychaetes  (see Table 26).-

     Group  2  included  Station NG-10 from South Port  Gardner,  Stations EW-12
EW-14 from  the  East Waterway, and  Station SR-08.   Between-station similari-
ties  ranged from  41  to  45  percent (based  on  the similarity coefficient).
Fewer  dominant  taxa than  Group  1 were  common   among  the  four  stations.
Alvania  spp.   and  Platvnereis  bicanaliculata  were  both  common  at  three
stations, and  Leptochelia dubla was common  at  two stations.   The sediments
at  Stations EW-12  and  SR-08 consisted  primarily of medium  to  fine  sands.
Stations  NG-10  and  EW-14 also exhibited  sandy substrate but  sediments  at
those stations  included 12 and 38  percent  gravel  or gravel  sized particles
(i.e.,  woodchips),  respectively.     Total   organic  carbon  content   of  the
sediments at  the  stations in  Group 2  ranged from 0.71 to 4.66 percent.  One
or  no depressions  in  the abundances  of  the  major taxonomic  groups  were
recorded at each  station  in  this  cluster.  Both of the two recorded depres-
sions were for pelecypods.

     Group 3  consisted  of Stations EW-01, EW-04,  EW-07  and EW-10.  All four
stations were numerically  dominated  by  Capitella capitata.  nematodes  and
                                    196

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Nebalia spp.   C.  capitata and nematodes were  the most abundant at Stations
EW-04  and  EW-10.    These  stations  clustered  together  with a  fairly  high
similarity  coefficient  (57  percent).   Results  of the  t-tests documented
significant  enhancements  in  abundances of polychaetes  at  both  stations.
These  same  taxa were  also  dominant  at Stations  EW-01  and  EW-07,  but abun-
dances  there were  very  low.    Abundances of  polychaetes,  pelecypods  and
gastropods  were  significantly  depressed  at  Stations  EW-01  and   EW-07.
Sediment  characteristics were  similar among  all  four stations.   Percent
fines  (silt  and clay)  ranged from 56  to 79 percent.   Most importantly,  TOC
content of the  sediments was  elevated at  all  four stations, and ranged  from
8.7 to 29.4 percent.  The highest TOC value occurred at Station  EW-04, which
also  exhibited  the highest  total   abundance   (i.e.,  20,676/m2)  among  the
Everett Harbor  and  Port Susan stations sampled in 1986.

     Stations  SD-01 and  SR-07  were  both outliers  in  the  classification
analysis.  Low  total  abundances were recorded  at  both stations,  and  both
exhibited  significant   depressions   in  the  abundances  of polychaetes  and
pelecypods1.   Total  crustacean  abundances were  also  depressed  at  Station
SR-07.   Archaeomvsis  qrebnitzkii  and Grandifoxus orandis  were the  most
common species  at Station SD-01.   Species composition at this station was the
least similar of all the Everett  Harbor stations.  The hydrographic regime at
this  station  (i.e.,  high  currents)  probably  contributed  to  this   unique
species composition.  Station SR-07 was  numerically  dominated by  Tharvx spp.,
Macoma nasuta. M. carlottensis.  and Heteromastus  filibranchus.  These species
are opportunistic  or pollution-tolerant, and  are often numerically dominant
in areas where  sediments are organically  enriched, or  where other stresses
favor  opportunistic species.   The   sediments  at  Station SD-01  were   coarse
sand with  some gravel.   Sediment  TOC content was  low  (i.e.,  0.24 percent)
and comparable  to  that in Port  Susan  and  at  other Everett Harbor stations.
The sediments at Station  SR-07 were  primarily  clayey  silts (percent fines =
95.4 percent).   This sediment  type was found  at no other station in Everett
Harbor.  Sediment  TOC  content  was  3.2 percent,  a value slightly higher  than
most sediments  throughout Puget Sound.
                                    197

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Comparison of .Species and Ma.ior Taxa Level Analyses

     Species-level  data  provided  detailed  information about  benthic com-
munities at each test station in Everett Harbor.  In most cases, the species
data identified  the same problem  areas as did  the statistical comparisons
using abundances of major taxonomic groups.   Pairwise statistical comparisons
of  the  abundances  of  major  taxonomic groups  identified  Stations   EW-01,
EW-07,  SD-01  and SR-07  as potential problem  areas.   Each  of these stations
exhibited three  or four depressions in  total  abundances or the abundances of
the four major taxonomic  groups (see Table 26).  However, examination  of the
species  composition  at  Station SD-01  suggested  that  this  station exhibited
depressed  abundances  due  to  effects  other  than  organic  enrichment  or
contamination of the sediments by toxic substances.  Although total abundance
at Station SD-01 was the  lowest observed in Everett Harbor, this station was
dominated  by  two crustaceans that belong  to families  that  are known  to be
highly sensitive to pollutants  (i.e.,  phoxocephalid  amphipods  and mysids).
Other  members of  these  two  families   are  used as experimental  animals  in
water  and  sediment toxicity  bioassays.  Field  observations  suggested that
this station  experiences swift currents that cause  extreme physical   stress
on the benthic.community.

     Further examination  of benthic community indices that use species-level
data indicated that in  addition  to Stations EW-01  and EW-07, Stations EW-04
and EW-10  in  the East Waterway  were also experiencing stress due to organic
enrichment.  The species  composition at these two stations were very similar
to  those at  Stations  EW-01  and   EW-07.   All  four of these  stations were
dominated  by  opportunistic   or  pollution-tolerant  taxa  (i.e.,  nematodes,
Capitella  caoitata. and  Nebalia spp.)   The  sediments  at Stations EW-04 and
EW-10  contained  the  highest  concentrations  of sulfides  and  total  organic
carbon measured  at  any  Everett Harbor  station.   The benthic communities at
these  stations exhibit  the classic response  to  high  organic enrichment [as
defined by Pearson and Rosenberg (1978)] wherein opportunistic species  become
very abundant and  dominate  the   benthic  community  (Figure  49).   Between
station  statistical  comparisons  of the  abundances  of  the  major taxonomic
groups  were unable  to detect a potential  problem  at these stations because
abundances of  the  numerically dominant taxa  were  extremely elevated.   Only
                                     198

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                                                        -~ — s
                   Increasing Organic Input
                   S = Species numbers
                   A = Total abundance
                   B = Total biomass
                   PO = Peak of opportunists
                   E = Ecotone point
                   TR = Transition zone
                                      Reference: Pearson & Rosenberg (1978).
Figure 49.  Generalized diagram of changes in species, abundance,
            and biomass along a gradient of organic enrichment.
                            199

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pelecypods exhibited  significant  depressions  in abundance at these stations
(see Table 26).

     In general,  crustaceans  as a group did  not  display the sensitivity to
pollutant  stress  that has  been observed  in  other Puget  Sound embayments.
Examination of the  species  data suggested  that this phenomena may have been
due (in part) to  the  abundance of a group of amphipods  (Aoroides spp.) that
appear to be tolerant of, or enhanced by, organic enrichment.  This group of
amphipods was present at 13 of  the 19 stations sampled in Everett Harbor and
Port Susan and  was  among the  dominant  taxa  at Stations  EW-04,  EW-07, EW-10
and EW-14.  These four stations were characterized by fine-grained sediments
(percent fines ranged from  32.3 to 77.1 percent),  elevated sediment sulfide
concentrations  (700-7,610  ppm) and elevated  sediment  TOC content (4.7-29.4
percent).  An  additional dampening effect to  the  responsiveness of crusta-
ceans to environmental contamination was created by  the presence Euphilomedes
spp.   Euphilomedes  carcharodonta  was  dominant  at 11  of  the  19  stations
sampled and was often the most  abundant taxon.

Indices for Decision Criteria

     Concentrations of toxic substances  in  the sediments  may cause reductions
in the abundances of  sensitive taxa (Wolfe et al.  1982;  Rygg 1985,  1986) or
all taxa  (Bilyard 1987).  An  extreme degree  of organic  enrichment  may also
result  in  the  loss  of   infaunal  species  (Pearson  and Rosenberg  1978).   In
this study,  the  locations and  magnitudes of  impacts  were determined by the
results of  the comparisons of major  taxa abundance  between  Port Susan and
Everett Harbor stations discussed earlier (see Table 26). Species level data
were used  to infer  whether the  presence  of organic materials,  toxic sub-
stances, or  possibly  other  effects were causing the observed depressions in
taxonomic abundance.

     The  relative degree of  impact at  each  test  station was  estimated by
ranking  stations  according  to  the  number   of  statistically  significant
depressions  in  the  abundances  of Polychaeta,  Crustacea,  Pelecypoda,  and
Gastropoda.  The major taxonomic groups comprise many different species with
varying degree  of sensitivities to organic enrichment  and toxic chemicals.
                                    200

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In general,  pelecypods  and  crustaceans  appear  to  be  fairly  sensitive to
stressed conditions,  and tend  to exhibit  reduced  abundances.   Because of
this sensitivity, they tend  to  be good indicators of stressed conditions at
the major  taxonomic level.    In contrast, polychaetes  tend  to have species
that are  both  sensitive and tolerant to  these  inputs.   Because  of this
variability, polychaetes often  provide less  useful  information at the major
taxonomic level.  Moreover,  total  infaunal  abundance  often mirrors polychaete
abundance  because  polychaetes  are  often  the most  abundant  group,  and  may
account for greater than 50 percent of the total  abundance.

     The aforementioned  pattern  of  sensitivity  among  the major  taxonomic
groups has been  observed in  several  Puget Sound  urban embayments,  including
Elliott  Bay (PTI  and Tetra Tech  1988)  and Commencement  Bay  (Tetra Tech
1985a).     However,  in  Everett  Harbor the major  taxonomic  groups  did  not
always exhibit  typical responses.   Hence,  analyses  of the abundances of the
major taxonomic  groups did   not  always provide  complete  indications  of  the
factors to which the benthic communities were responding.

     Using the  statistically-detected  differences in the  abundances  of  the
major taxonomic  groups,  Stations EW-01,  EW-07,  SD-01 and  SR-07  appeared to
be the  most impacted:   two  or three  depressions  were  recorded at  each  of
these stations  (Figure  50).   Abundances  of  all  major taxonomic  groups  at
these  four stations  were  depressed 70  to 100  percent when  compared with
abundances  at   Port  Susan.    East Waterway  Stations EW-01  and EW-07  were
dominated by nematodes and Caoitella capitata. both of which  are opportunis-
tic or pollution-tolerant taxa.   These stations  may be responding to extreme
organic enrichment, sediment contamination by toxic  substances  or  both.   It
is difficult to  attribute causality  to these  effects because high  levels of
organics in the sediments  and toxic substances can  cause large depressions
in infaunal abundances.  However,  examination of  the benthic communities at
nearby Stations EW-04 and EW-10 showed extremely elevated populations of the
same species.   Sediments at these four East  Waterway stations were charac-
terized by fine  grained  sediments  (percent fines  ranged from 56.4 to 78.8),
elevated levels of total  organic carbon (6.0 to 29.4 percent), and very high
concentrations of total  sulfides  (1,200 to 7,610  ppm).   Based on these data
it appears  that these four  stations  were responding to  organic enrichment
                                    201

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                                                                                — EW-041  I
                                                                                  EW-07
                                                                                  EW-10C~I
                                                                 I   IEW-12<

                                                             I  IEW-U
              NG-04f_J     •
• « JJ&sf*  'v— NG-06II
       NG-101   I
                                                             I   I  0 SIGNIFICANT DEPRESSIONS
                                                             I  I  1 SIGNIFICANT DEPRESSION
                                                                  2 SIGNIFICANT DEPRESSIONS
                                                                  3 SIGNIFICANT DEPRESSIONS
                                                                  4 SIGNIFICANT DEPRESSIONS
                                                 Figure 50.  Summary of spatial patterns of significant (P < 0.001)
                                                            benthic depressions among the Everett Harbor stations
                                                  202

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[as described by Pearson and Rosenberg (1978)].   Stations  EW-01  and  EW-07 may
have been beyond the  "peak  of opportunists,"  and therefore exhibited  highly
depressed abundances.   At  Stations  EW-04 and  EW-10,  opportunistic species
are still dominant but may  not  have gone past  the  "peak of opportunists."
Exclusive use  of the  abundances  of  the major taxonomic  groups was able to
detect only two  of the four stations in the East Waterway where communities
were stressed.

     Abundances  of the major taxonomic  groups  also identified Station SR-07
as a  potential  problem site.  Species  composition  at this station differed
greatly from that  at  most other  Everett Harbor stations.   Station  SR-07 was
also  characterized  by the  finest-grained  sediments  observed in Everett
Harbor  (fines  = 95.4 percent),   elevated  total  sulfides in the   sediments
(600 ppm),   and  a  slightly  elevated  concentration  of total  organic  carbon
(3.24 percent).  Species data indicated that  the community at this site was
dominated  by  two   capitellid polychaetes  (Heteromastus filibranchus  and
Barantolla americana), two species of the bivalve Macoma (M. carlottensis and
M. nasuta)   and the cirratu-lid polychaete Tharvx  spp.   Several of'these taxa
have been defined  as  pollution-tolerant or  opportunistic  (Word  et  -al..!977;
Pearson and  Rosenberg  1978; Word 1980)   which would  support  the interpreta-
tion that the benthic  community  at  this station  is experiencing some degree
of pollutant  stress.   However,  data are  insufficient (i.e.,  there  are no
other  nearby  benthic  stations)  to  interpret  whether  or not  the  observed
stresses are due to organic enrichment,   toxic substances,  or both.

     Station SD-01  also exhibited  a  high number  of depressions  in   the abun-
dances of the major taxonomic groups.   The  physical  characteristics of this
station consisted  of sandy  sediments (with 12 percent  gravel  present),  low
total  organic carbon  content,  low sulfide,  and  swift currents.   The species
composition   at  this  station was  the  least similar  to  all  other stations
sampled.   It was  dominated  by  the  mysid Archaeomvsis qrebnitzkii and  the
phoxocephalid  amphipod Grandifoxus  qrandis.    A few  pollution-tolerant or
opportunistic taxa were present  (16.7  percent).   These  data contradict the
identification  of   this  site  as  a  potential  problem  area.    As   discussed
earlier this community may be stressed  by physical factors.
                                    203

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     No other station in Everett Harbor was  identified as a potential problem
area using depressed abundances of the major taxonomic groups as the decision
criteria.   All  other stations  (i.e.,  Stations NG-01,  NG-02,  NG-03,  NG-04,
NG-06,  NG-10,   EW-12,   EW-14,  SD-02  and  SR-08)  exhibited  only  one or  no
depressions.  Sediment  characteristics (i.e.,  grain size,  TOO, sulfides)  at
the majority .of these  remaining stations  were very similar  to  Port Susan
sediments.   Species  composition at  each of  these stations  was  also  very
similar  to  Port Susan,  with Euphilomedes  carcharodonta.  Axinopsida serri-
cata. and Psephidia  lordi  being the dominant taxa at 50-80 percent of these
remaining stations.

Comparison with Recent  Historical Data

     Historical data collected  during  1984 and  1985 during the Navy Homeport
Study (Parametrix  1985;  U.S.  Army COE 1985)  were  reviewed and compared with
the  results of  this study.    In  1984,   nine  stations  were sampled  in  the
nearshore  areas of  Everett  Harbor,   the  East Waterway  and  the  Snohomish
River.   This study was  conducted in the summer of  1984, and the majority of
the stations were  located  in East Waterway.   The  1985 study occurred in the
winter and  sampled seven stations located adjacent  to the East Waterway,  and
in the  lower  Snohomish  River and delta.   The  laboratory processing methods
used  in  this  later study  were  not  comparable to standard  benthic  sample
processing techniques (e.g. use of 1.0-mm  screen)  and tended to underestimate
species  richness and abundance  of the  benthic assemblages.

     Historical data tended  to  identify problem areas similar to those found
in this  study.   Total  abundances at  the  historical stations sampled in the
East  Waterway   ranged  from  52   to  5,203  individuals per  station  and  mean
number  of  taxa  collected  there ranged  from  1.8  to  21.4.   The   benthic
community  was  dominated  by  Capitella  capitata.   nematodes,  and  Nebalia
puqettensis.  In some areas  within the East Waterway  in  1984,  these  species
accounted for  100  percent  of the organisms collected.   SDI calculated for
these stations  reflected  these highly dominated  assemblages:   most values
were  less  than  1.0.    Reference areas were not  sampled  as  part  of these
historical  studies so no  statistical  comparisons of the  abundances  of the
major taxonomic groups  could  be  made.    However,  examination of  the data
                                    204

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 showed  that molluscs, total Crustacea, and amphipods were  either absent, or
 occurred at very low abundances at many of these stations.

      Additional  historical stations  adjacent  to the mouth  of  East Waterway
 were also sampled during the  1984 and 1985 studies.   Mean numbers of taxa at
 those stations ranged from 31.6 to 69 per station.   Total abundance was also
 higher  at those  stations  than  at stations in the East  Waterway,  and ranged
 from 2,496 to 9,676  individuals/m2.   SDI  was  less than  5.0 at  all stations.
 Communities were dominated by many of the same taxa  as  in East  Waterway,  but
 included Euohilomedes carcharodonta.

      Values of various.benthic community  indices that were calculated  using
 historical data  from the  three  stations in  the -Snohomish River initially
 suggested a potential problem in  the  lower river where  the  channelization of
 the river mouth  begins.    Numbers of  taxa and total abundances were low at
 two stations (mean nos.  of taxa were 7 and 7; total  abundances were 265  and
 556),  and values of  SDI were low  (1.80 and 2.85).   However, the numerically
.dominant  taxa  at these  stations  were not  indicative  of  a high  degree  of
 stress  rel-ated to organic  enrichment  or  the presence of toxic  substances in
 the sediments.   Insufficient  data  are available to  determine whether  the
 benthic  community  in this area  was responding to some  type of  physical
 stress.

      Numbers  of  taxa  and total  abundances  recorded   at  three  historical
 stations sampled within  the river delta were  slightly higher than in samples
 from the  river  channel.    Mean numbers  of taxa ranged  from 13.8  to 20  per
 station,  and  total  abundance  ranged  from   374  to  1,299  individuals/m2.
 Values  of SDI ranged from  3.44 to 4.17.   In most cases,  these  values of  the
 SDI would suggest that the possibility of stresses  to the  benthic community
 be  explored.
 Summary
           Eighteen  significant (P<0.001)  depressions in abundances were
           detected   among   64   statistical  comparisons  of  four  major
           taxonomic groups  at 16 benthic  stations  in  Everett  Harbor.
                                     205

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Significantly enhanced  abundances  were detected in 18 eases,
and no significant differences were found in 28 comparisons.

Five stations  in Everett Harbor exhibited  no depressions in
the abundances  of the  four major taxa  selected  for problem
identification (polychaetes, pelecypods, gastropods and total
crustaceans).   Seven stations exhibited  one  depression,  one
station   exhibited   two  depressions,   and   three  stations
exhib-ited three depressions.

The most  impacted stations  in Everett  Harbor  were Stations
EW-01, EW-07  (East  Waterway),  SD-01  (Snohomish  River Delta),
and SR-07  (Snohomish River)  based  on  depressions  detected in
major  taxonomic  abundance.   Species  level  data also identi-
fied East Waterway  Stations EW-04  and EW-10 as  being greatly
impacted.

The lowest  number of taxa occurred at Stations  EW-01,  EW-04,
EW-07, SD-01,  and SR-07,  all  of which  exhibited  three  sig-
nificant  (P<0.001) depressions in the abundances of the major
taxonomic groups, with  the  exception  of Station SD-01,  where
polychaetes and pelecypods were depressed, and Station EW-04,
where  only  pelecypods were depressed.   Station EW-04 was also
characterized  by  the  highest  total   abundance   of  benthic
infauna observed  in  Everett Harbor in 1986.

Species compositions of the benthic  communities  at the East
Waterway  stations was  very  similar.    Several  dominant  taxa
were common to those stations.   This area had the greatest
number of  stations  that exhibited significant depressions in
abundances  of  the   major  taxonomic  groups.     Many of  the
numerically dominant taxa present at  the South Port Gardner
Stations  SD-02  and  SR-08  were also  numerically  dominant in
Port Susan.  Only one group or no groups exhibited depressed
abundances  at  Stations  SD-02,  SR-08,   or any  of the stations
in South Port Gardner.
                          206

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     •    Station groups that resulted from the classification analysis
          tended  to  confirm  the  identification  of  potential  problem
          areas  based  on  both  the  depressed  abundances of  the major
          taxonomic groups and on species composition.  Stations EW-01,
          EW-04,  EW-07,  and  EW-10  were  included  in one group, Stations
          EW-12,  EW-14,  NG-10,  and  SR-08  were  included  in  a  second
          group, Stations PS-02, PS-03,  PS-04, NG-01, NG-02, NG-03, NG-
          04,  NG-06,  and  SD-02 'were included  in  a third  group,  and
          Stations SR-07 and SD-01 were outliers.

FISH ECOLOGY

     This section  provides a description of  the  general  characteristics of
the demersal fish assemblages and English sole populations sampled at the 10
                                 *
transects  in  Everett  Harbor and  the  single  transect  in  Port Susan   (see
Figure 6).   Demersal  fish  assemblages  are compared  between  Everett Harbor
and Port  Susan with  respect to  species composition,  total  abundance, total
number of species, and  diversity.    English  sole populations  are compared
between the two areas with respect to abundance and relative abundance.

Demersal   Fish  Assemblages

Species Composition—

     A total of 6,373  fishes,  representing 17 families  and 38 species, was
sampled in  this  study  (Table 27).   Everett Harbor yielded 5,790 individuals
and 37 species, whereas  583  individuals and 21 species were captured  at  Port
Susan.   Much  of  the  observed difference  in  catches between  the  two study
areas  likely resulted  from  the  larger  sampling  effort  expended  in  Everett
Harbor,  but may  also  have been  partly  the result  of  increased   habitat
complexity  (e.g., pilings, rocks, debris) in Everett Harbor.

     The  most  abundant  family  of fishes sampled  in  both Everett Harbor and
Port Susan  was Pleuronectidae  (62.6  and  48.3 percent,  respectively).   The
                                    207

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TABLE 27.   RELATIVE  ABUNDANCES OF FISHES CAPTURED
        IN EVERETT HARBOR AND PORT  SUSAN
Fami 1 y
Squal idae
Chlmeridae
Clupeidae
Osmeridae
Batrachoididae
Gadidae
Zoarcidae
Gasterosteidae
Embiotocidae
Bathymasteridae
Stlchaeldae
Scorpaeni dae
Hexagramnidae
Cottldae
Agon idae
Both idae
Pleuronectidae

Relative Abundance (%)
Species
Saualus acanthi as
Hvdrolaaus colliei
Cluoea harengus oallasi
Hypomesus pretiosus
oretlosus
Porichthvs nota.tus
Gadus macrocephalus
Theraora chalcogramma
Microaadus proximus
Lvcodopsis pacifica
Aulorhvnchus flavidus
Cymatoqaster aqqreqata
Embiotoca lateral is
Rhacochi lus vacca
Ronauilus .iordani
Lumpenus saaitta
Sebastes caurinus
Hexaqrammos decaqraimus
Hexaqramnos stelleri
Oxvleblus oictus
Chitonotus puaetensis
Enophrvs bison
Leptocottus armatus
Mvoxocephalus
ool vacanthocephal us
Nautichthvs oculofasciatus
Rhamphocottus richardsoni
Scorpaeni chtnvs tnarmoratus
Aqonus acioenserinus
Citharichthvs sordidus
Citharichthvs stiqmaeus
Atheresthes stomias
Glvptocephalus zachirus
Hipppqlossoides elassodon
Lepidopsetta bi 1 i neata
Lvopsetta exi 1 is
Microstomus pacificus
Parophrvs vetulus
Platichthvs stellatus
Psettichthvs melanostictus

Common Name Everett Harbor Port Susan
spiny dogfish
ratfish
Pacific herring
surf smelt
plainfin midshipman
Pacific cod
walleye pollock
Pacific tomcod
blackball y eelpout
tube-snout
shiner perch
striped seaperch
pile perch
northern ronquil
snake prickleback
copper rockfish
kelp greenling"
whitespotted greenling
painted greenling
roughback sculpin
buffalo sculpin
Pacific staghorn sculpin
great sculpin
sailfin sculpin
grunt sculpin
cabezon
sturgeon poacher
Pacific sanddab
speckled sanddab
arrowtooth flounder
rex sole
flathead sole
rock sole
slender sole
Dover sole
English sole
starry flounder
sand sole
Total Catch

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most  abundant  pleuronectid  in  both areas  was English  sole  (52.1 and  37.9
percent, respectively).

Assemblage Characteristics--

     Demersal  fish assemblages  at individual  transects  in  Everett  Harbor
were  compared  qualitatively with the assemblage  at  Port Susan on the basis
of three major characteristics:   total  abundance,  total number of species,
and  diversity  (Table  28).   The  latter variable  was  estimated  using the
Shannon-Wiener  index (H1)  (Shannon  and Weaver  1949).

     Total abundance at  3 of the  10  Everett Harbor transects  (i.e.,  EW-91,
SD-92, SD-94) exceeded the value at Port  Susan  (i.e., 16.2  individuals/100 m)
by a  factor  of 2 or greater.  By contrast,  total abundances at four  Everett
Harbor  transects  (i.e.,  NG-91,  NG-92,  NG-93, NG-94)  were lower  than  the
value at Port Susan by a  factor of  2 or  greater.

     The  total  number   of  species  at  Everett  Harbor  transects   (i.e./
range = 11-24)  exceeded  the value observed  at  Port  Susan  (i.e.,  21) at one
transect  (i.e.,  EW-92)  and was lower than  that value at the remaining nine
transects. The diversity  at Everett Harbor transects (i.e.,  range = 1.06-2.12)
exceeded  the  value observ-ed  at  Port  Susan  (i.e.,  1.98) at  one transect
(i.e., EW-92)  and  was lower  than that value  at  the remaining transects.

      In summary,  the total  abundance of fish  assemblages  was  substantially
reduced along most  of the southern  shoreline of Port Gardner relative to the
observed  abundance in  Port Susan.   By  contrast,  total  abundance  of fish
assemblages  was  much higher in  the East Waterway and throughout most of the
Snohomish Delta than  the observed  value  in  Port  Susan.  Throughout  most of
the  Everett  Harbor study area, both the number of species and diversity of
fish assemblages were lower  than the observed  value  in  Port Susan.  The only
exception  to this  pattern was  found  at the  transect  outside of  the  East
Waterway (i.e.,  EW-92).   Although these  comparisons  are  largely descriptive,
the  general  pattern  of  reduced  numbers  of  species  and  diversity  values
throughout most of the  Everett  Harbor study  area  suggest that fish  assem-
blages may be  negatively  affected relative to  the assemblage in Port Susan.
                                    209

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TABLE 28.  COMPARISONS OF MAJOR CHARACTERISTICS
     OF FISH ASSEMBLAGES IN EVERETT HARBOR
                 AND  PORT SUSAN

Transect
Port Susan
PS-91
Everett Harbor
NG-93
NG-92
NG-91
NG-94
EW-92
EW-91
SR-92
SD-91
SD-94
SD-92
Total
Abundance
(per 100 m)

16.2

6.3
5.6
5.4
2.0
15.5
34.0
12.6
20.2
39.8
67.9
Number
of Species

21

17
11
11
15
24
20
17
18
13
17
Diversity
(H1)

1.98

1.77
1.20
1.43
1.40
2.12
1.59
1.06
1.43
1.06
1.75
                 210

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However,  the  reasons  for these  potential  negative  effects  are  uncertain.
They could  be  related to chemical  contamination  or to other variables  such
as  low  salinity,  low  habitat  complexity,  or  reduced  densities  of  prey
organisms.

English Sole Populations

     The  abundance of English sole at 3  of  the  10 Everett Harbor transects
(i.e.,  EW-91,  SD-91, SD-92)  exceeded that  at  Port  Susan  (i.e.,  6.1 indi-
viduals/100 m) "by a  factor  of 2 or  greater (Table  29).   By contrast,  the
abundance  of  English  sole  at three  transects   (NG-91,  NG-93,  NG-94)  was
lower than  the value  in  Port Susan  by a  factor  of 2  or  greater.   The
relative  abundance  of  English  sole  at  Everett  Harbor transects   (i.e.,
range = 25.8-63.5 percent) exceeded the  value  observed at Port Susan  (i.e.,
37.9 percent)  at all transects except Transect SD-94.

Summary

     •    The most abundant fami.ly  of fishes in both  Everett Harbor and,
          Port Susan was  Pleuronectidae

     •    The  most  abundant  pleuronectid  in   both  study  areas  was
          English sole

     •    The  abundances  of   demersal  fishes  at  four  Everett Harbor
          transects  were  substantially lower (i.e.,  <50 percent) than
          the abundance at Port Susan

     •    The total  numbers  of species and  diversities  of fish assem-
          blages  at  most transects in  Everett Harbor were  lower than
          the respective  values at  Port Susan.

FISH HISTOPATHOLOGY

     This   section   presents   the  results  of  histopathological  analyses
conducted on the  livers  of English sole  collected at 10 trawl transects  in
                                    211

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TABLE 29.  COMPARISONS OF ABUNDANCE AND RELATIVE
   ABUNDANCE  OF  ENGLISH SOLE  IN EVERETT HARBOR
                 AND PORT SUSAN

Transect
Port Susan
PS-91
Everett Harbor
NG-93
NG-92
NG-91
NG-94
EW-92
EW-91
SR-92
SD-91
SD-94
SD-92
Abundance
(per 100 m)

6.1

3.0
3.5
3.0
1.3
6.6
20.1
8.3
12.8
10.3
27.3
Relative
Abundance
(percent)

37.7

47.6
62.5
55.6
65.0
42.6
59.1
65.9
63.4
25.9
40.2
                 212

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Everett  Harbor  and  at  one  transect  in  a  reference  area  in  Port  Susan
(see  Figure  6).   Three  major kinds  of lesion were  evaluated:    neoplasms,
foci of cellular alteration, and megalocytic  hepatosis (see  Methods section).
Before  the  lesions  are  considered,  the age and  sex  characteristics of  the
English sole sample from each Everett Harbor transect are compared with  the
respective  characteristics  of  the  sample from  Port Susan.    The  overall
prevalences  of the  lesions  in  Everett Harbor and at Port Susan are then
presented, and  the  relationships between the  prevalence  of each  lesion  and
fish  sex  and .age are  determined.    Next,  comparisons of lesion prevalences
between  each Everett  Harbor transect  and Port  Susan are made.   Finally,
results of the present study  are compared with historical information on  the
prevalence of hepatic  lesions in English sole  from Everett Harbor.

Age and Sex Characteristics of Fish  Populations

     Ages  of English  sole at  three transects  in  Everett  Harbor differed
significantly  (P<0.05) from ages of  fish captured in  Port Susan (Table 30).
In two  cases  (i.e.,  Transects NG-91  and NG-92),  median fish age was  greater
than  that  observed  in Port Susan.   At. Transect  SR-92,  median  fish age  was
less  than  that  observed  in Port Susan.   Male  proportion of English sole at
two  transects  in Everett  Harbor  (i.e.,  Transects  NG-93  and  EW-92)   was
significantly (P<0.05) greater than  the proportion in Port Susan (Table 30).

General Patterns  of Lesion  Prevalences

     A  total of  71  of  the  594 (12.0  percent)  English  sole   (age  >3  yr)
sampled  from Everett  Harbor  and Port  Susan  had one or more of  the  three
kinds  of hepatic  lesions  considered  in this  study   (Table 31).    Of this
total,  56  (9.4  percent)  had  only a  single kind  of lesion,  13 (2.2 percent)
had two kinds of  lesions, and 2 (0.3  percent)  had  all  three  kinds of lesions.

     The prevalence  of each  kind of hepatic  lesion  evaluated  in  this  study
was greater in Everett Harbor than in Port Susan  (Table 31).  In most cases,
the differences between  these two  areas were substantial.  Foci of cellular
alteration was  the  lesion found most frequently  in  Everett Harbor and Port
                                    213

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        TABLE 30.  COMPARISONS OF AGE AND MALE
         PROPORTION BETWEEN ENGLISH SOLE FROM
             EVERETT HARBOR AND PORT SUSAN

Transect
Port Susan
PS-91
Everett Harbor
NG-93
NG-92
NG-91
NG-94
EW-92
EW-91
SR-92
SD-91
SD-94
SD-92
Sample
Size3

56

56
60
58
57
55
49
41
58
51
53
Median
Age (yr)b

4.0

4.4 ns
5.6***
5^7***
4.6 ns
3.6 ns
3.3 ns
3.0*
3.8 ns
3.8 ns
3.1 ns
Male
Proportion0

0.18

0.45*
0.08 ns
0.10 ns
0.18 ns
0.47*
0.41 ns
0.44 ns
0.28 ns
0.20 ns
0.17 ns

a All fish were >3 years old.

b Comparisons were made  using  the Mann-Whitney U-test.
* = P<0.05; *** = P<0.001; ns = P>0.05.

c Comparisons were made using the G-test of independence.
* = P<0.05; ns = P>0.05.
                    214

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            TABLE 31.  PREVALENCES OF HEPATIC LESIONS
               IN ENGLISH SOLE FROM EVERETT HARBOR
                         AND  PORT  SUSAN

Hepatic Lesion
Neoplasms
Liver cell adenoma
Hepatocellular carcinoma
One or more kinds of neoplasm^
Foci of celluar alteration
Eosinophilic foci
Basophilic foci
Clear cell foci
One or more kinds of foci of
cellular alteration"
Megalocytic hepatosis
One or more of the three major
kinds of hepatic lesion"
Everett Harbor
(n=538a)

1.9
0.7
2.4

7.6
3.0
2.2
10.8
2.4 •
12.5
Port Susan
(n=56a)

0
0
0

5.4
0
1.8
7.1
0
7.1

a All fish were >3 years old.

b Some fish had more than one kind of hepatic lesion.
                        215

-------
Susan  (10.8  and  7.1  percent,  respectively).    Neoplasms  and megalocytic
hepatosis were not found  in  Port Susan.

     Within  Everett  Harbor,  prevalences  of neoplasms  and  foci of cellular
alteration  were  correlated positively  (P<0.05) with  increasing age of  fish
(Figure 51).  These patterns  are consistent with the results of past studies
(Malins et  al.  1982;  McCain  et  al.  1982;  Becker  et al. 1987;   Rhodes et  al.
1987;  PTI   and  Tetra  Tech  1988).    Prevalence  of  neoplasms  increased  from
0 percent in  fish aged 2-5 yr  old  to 15.6 percent in  fish  aged  >9 yr  old.
Prevalence  of foci of  cellular alteration increased from 0 percent in 2-yr-
old  fish to 40.6  percent in fish aged >9 yr old.   Prevalence of megalocytic
hepatosis was  not linearly  correlated  with fish age  (PX1.05)  (Figure  51),
which  is consistent with  results of  past  studies  (Becker et al. 1987;. Rhodes
et al.  1987;  PTI and Tetra  Tech  1988).  However, the prevalence of megalo-
cytic  hepatosis  peaked  at  an age of 6 yr, which  corresponds  to  the trend
found  by Tetra Tech (1985a)  and  PTI  and Tetra Tech  (1988).

     The  prevalence   of  megalocytic  hepatosis   exhibited  a  significant
difference  (P<0.05) between  sexes, whereas  prevalences  of neoplasms and  foci
of cellular alteration did  not  differ  significantly  (P>0.05)  between sexes
(Table 32).  Past studies of  English  sole populations have reported the  lack
of a difference  in  the  prevalence  of  megalocytic hepatosis  between  sexes
(McCain et  al.  1982;  Malins  et al.  1982;  Krahn et al.  1986;  Becker et  al.
1987;  Rhodes et al. 1987).

Comparisons of Lesion Prevalences Between Study Areas

     Because  prevalences of  neoplasms  and  foci  of cellular  alteration  in
Everett Harbor  correlated with  fish age (Figure 51),  age distributions  at
those  transects   that  differed  from Port  Susan  with  respect  to  fish  age
(i.e., NG-91, NG-92,  and SR-92; Table  30)  were adjusted before comparisons
with the  reference  area  were made.   Adjustments  were made by sequentially
removing the youngest  fish  from  Transect SR-92  and   the  oldest  fish  from
Transects NG-91  and  NG-92  until  each  remaining  age  distribution  did  not
differ significantly  (P>0.05) from the age distribution  at Port Susan.   In
making these  adjustments,  4,  12,  and  15  fish were  removed from  Transects
                                     216

-------
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 Figure 51.  Comparisons of prevalences of hepatic lesions
           with age of English sole from Everett Harbor using
           Spearman's coefficient of rank correlation (rs).
	**P<0.01, ns = P>0.05.	
                          217

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        TABLE 32.  COMPARISONS OF LESION PREVALENCES BETWEEN MALE
               AND FEMALE ENGLISH SOLE FROM EVERETT HARBOR

Percent having Each
Kind of Lesion3
Hepatic Lesion
Neoplasms
Foci of cellular alteration
Megalocytic hepatosis
Males
(n=145)
2.8
11.0
5.5
Females
(n=393)
2.3
10.7
1.3
Significance15
ns
ns
**

All fish were >3 years old.

Comparisons were made using the G-test of independence.
** = P<0.01; ns = P>0.05.
                                  218

-------
SR-92, NG-91,  and  NG-92,  respectively.  A  graphical  comparison between  the
age  distribution  at  each   Everett  Harbor  transect  (including  the  three
adjusted distributions) and  the  age  distribution  at Port Susan is presented
in Figure 52.

     Although  prevalence  of  megalocytic hepatosis differed  between  sexes
(Table 32), the sex distributions at those transects that differed from Port
Susan with  respect  to male proportion were  not  adjusted before comparisons
with  the reference  area  were made.   Adjustments  were not  made primarily
because  the relationship  observed  in this  study  is  not  consistent with
results  of  past studies of  hepatic  lesions in English  sole (McCain et  al.
1982; Mai ins  et al.  1982; Becker  et  al.  1987; Rhodes et  al.  1987).   Thus,
the  relationship observed  in  this study  does not appear to  be  a  general
pattern.

      In  most  cases,  prevalences  of   each  kind  of hepatic lesion  at each
transect in  Everett  Harbor  exceeded  the  corresponding value from Port  Susan
(Table 33).  Concordance  among the prevalences of the three kinds of  lesion
across all   11  transects was not significant  (W=0.45, P>0.05).

      Prevalence of neoplasms at  the  10 Everett Harbor transects ranged from
0  to  8.8 percent,  with the  highest  value observed at Transect NG-94.   The
prevalence  of  neoplasms at  each  transect  in  Everett  Harbor did  not differ
significantly  (P>0.001)  from the  prevalence  of  0  percent  observed  at Port
Susan.

      Prevalence  of  foci of cellular alteration at  Everett Harbor transects
ranged from 0  to 21.1 percent, with the  highest  value observed at  Transect
NG-94.  The prevalence of this lesion  at each  transect in Everett Harbor  did
not  differ  significantly  (P>0.001)   from  the  prevalence  of 7.1   percent
observed at Port Susan.

     Prevalence of megalocytic hepatosis  at Everett Harbor transects  ranged
from  0 to  14.3 percent, with the  highest  value  observed at Transect  EW-91.
The prevalence of megalocytic  hepatosis at  each  transect  in Everett  Harbor
                                    219

-------
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                             FISH AGE (yr)
Figure 52.  Comparisons of age distributions between  Everett Harbor
            (solid lines) and Port Susan  (dashed lines) transects.
                              22.0

-------
             TABLE 33.   COMPARISONS OF PREVALENCES OF HEPATIC LESIONS
                IN ENGLISH SOLE FROM EVERETT HARBOR AND PORT SUSAN

Prevalence (%)b
Transect
Port Susan
PS-91
Everett Harbor
NG-93
NG-92
NG-91
NG-94
EW-92
EW-91
SR-92
SD-91
SD-94
SD-92
Sample
Size3

56

56
45
46
57
55
49
37
58
51
53
Neoplasms

0

5.4 ns
0 ns
2.2 ns
8.8*
0 ns
2.0 ns
0 ns
1.7 ns
0 ns
1.9 ns
Foci of
Cellular
Alteration

7.1

17.9 ns
8.9 ns
10.9 ns
21.1*
0 ns
10.2 ns
8.1 ns
3.5 ns
13.7 ns
5.7 ns
Megalocytic
Hepatosis

0

5.4 ns
0 ns
0 ns
0 ns
1.8 ns
14.3**
2.7 ns
0 ns
0 ns
1.9 ns
One or
More
Lesions

7.1

21.4*
8.9 ns
13.0 ns
21.1*
1.8 ns
16.3 ns
8.1 ns
5.2 ns
13.7 ns
7.6 ns

a All  fish were  >3 years  old,  and  the  age distribution  at  each transect from
Everett Harbor  does not differ significantly  (P>0.05)  from the age  distribution
at Port Susan.  Age distributions  at Stations NG-91, NG-92, and SR-92 were adjusted
before statistical  comparisons (see  text).
  Comparisons were made using the G-test of  independence.
  * = pn.ns.
                                    221

-------
did  not  differ  significantly  (PXJ.001)  from the  prevalence of  0 percent
observed at Port Susan.

     Prevalence  of one  or more  of  the three  kinds  of  hepatic  lesions at
Eyerett Harbor  transects ranged from  1.8  to  21.4 percent,  with the highest
value  observed  at  Transect  NG-93.   The prevalence of  one or more  of the
three lesions at each transect in Everett Harbor did not differ significantly
(P>0.001) from the  prevalence of  7.1 percent  observed at  Port Susan.

     The  spatial  distributions  of the  three kinds  of hepatic  lesions are
presented in  Figures  53-55.   The  highest  prevalences  of  both neoplasms and
foci of  cellular  alteration  were found  off  Pigeon Creek  and  the Mukilteo
Ferry Terminal.  The  highest prevalences of megalocytic hepatosis were found
in  the East  Waterway and  off the  Mukilteo  Ferry  Terminal.   The spatial
distributions  of  the three  kinds  of  hepatic   lesion  indicate   that  most
abnormalities  were found  near the  Mukilteo  Ferry  Terminal  and  along the
shoreline in and near the  East  Waterway.
                           *
Comparison with Recent Historical  Data-

     Results  of the  present study  were  compared  with   those  from surveys
conducted  throughout  Everett  Harbor  between 1979  and 1983  (Maiins,  D.C.,
21 November   1984,   personal   communication;   Mai ins  et   al.  1984,   1985,
unpublished).   Comparisons were  limited to descriptive evaluations because
different age distributions, of  English  sole were  examined in the two studies
and  because,  in some cases, fish  were collected at different locations and
during  different  seasons.    In  making these comparisons,  prevalences were
averaged  (if necessary)  within  five  areas:    the  East  Waterway   (Transect
EW-91), the Everett Waterfront (Transects EW-92 and  NG-94),  the Mukilteo area
(Transect NG-93),  the Snohomish River  Delta (Transects SR-92 and SD-91), and
Port Susan (Transect  PS-91).

     In general, the  relative spatial  patterns of lesion prevalences  in the
present study  were similar  to  those  found in  earlier studies (Figure  56).
In most  cases, the prevalences  of  all three kinds of  hepatic lesion were
                                     222

-------
                   LEGEND

                  I    I   0%

                         1 - 5%
Figure 53.  Spatial patterns of the prevalences of neoplasms in
          Everett Harbor.
 Z23

-------
Figure 54.  Spatial patterns of the prevalences of foci of cellular
           alterations in Everett Harbor.
 224

-------
ZZ5

-------
                                    PRESENTSTUDY




                                    MALINSETAL (1984)
Neoplasms
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LOCATION
NOTE: Sample sizes are shown in parentheses below location names.
Figure 56. Comparison of prevalences of hepatic lesions in English
sole sampled in the present study (stippled bars) and in
Malins et al. (1984) (open bars).
                  226

-------
higher along  the shoreline between  the  East Waterway  and  Mukilteo than on
the Snohomish River Delta or in Port Susan.

     The absolute  prevalences  of neoplasms and  foci  of cellular alteration
found  in  the  present  study were  also  similar  to  those  found  in earlier
studies.     However,  the  absolute  prevalences  of  megalocytic  hepatosis
observed in the  present  study  were  considerably  lower than  the values found
by the earlier studies.  Rhodes et al.  (1987) found that prevalences of this
lesion exhibited  significant  interannual variation  at  eight  sampling sites
throughout Puget  Sound.   By contrast,  prevalences of  neoplasms  and foci of
cellular  alteration  did  not   exhibit   significant  interannual  variation.
Rhodes et  al.  (1987)  suggested  that the increased  temporal  variability of
megalocytic  hepatosis   indicates  that  it may  have  different patterns  of
pathogenesis and progression than neoplasms and foci  of cellular alteration.

     The similarity  in  the relative spatial  patterns  of  lesion  prevalences
between the present study  and  the  studies  conducted  3-7 yr  earlier indicate
that these patterns are  real (i.e.,  they are  not artifacts  of the design of
the various  studies),  and that  they are relatively  stable over  time.   The
temporal  stability of these patterns suggests that the causes  of the lesions
are localized  primarily along  the  shoreline  between the East Waterway  and
Mukilteo,  and  that the  causes  have  not  been reduced  substantially between
1979 and 1986.
Summary
          Three kinds of hepatic  lesion were  considered  in this study:
          neoplasms,  foci   of  cellular  alteration,  and  megalocytic
          hepatosis.

          Prevalences of neoplasms and foci of cellular alteration were
          correlated positively (P<0.05)  with fish age.

          Prevalence of  megalocytic  hepatosis  was higher  (P<0.05)  in
          males than in females.
                                    227

-------
Prevalences of  all  three  lesions  at  many of the  10  Everett
Harbor transects  were  substantially  elevated above reference
values, but these differences were not statistically signifi-
cant at PO.001.

The  spatial  distributions  of  the  three  kinds  of  hepatic
lesions indicate that most abnormalities were confined to the
shoreline between the East Waterway and Mukilteo.

Results  of  the present  study were compared  with  historical
data  collected  3-7 yr  earlier.   The  relative  magnitudes  of
lesion prevalences  among areas  were  similar between studies.
The  absolute  magnitudes  of  lesion prevalences were  similar
between studies for neoplasms and  foci  of cellular alteration.
However,  prevalences  of megalocytic  hepatosis were consider-
ably  lower  in the present study than  the values found in the
earlier studies.
                           228

-------
        CONTAMINANT', TOXICITY, AND BIOLOGICAL EFFECTS RELATIONSHIPS
     Quantitative   relationships   among  the   contaminant,   toxicity,   and
biological  effects  variables  used  in the Everett  Harbor  investigation are
examined in this section.  The objectives of this section are to:

     •    Determine potential  correlations  between  sediment contamina-
          tion and benthic infauna depressions or toxicity to amphipods

     •    Compare  amphipod  bioassay  mortality  with  effects on  major
          taxa of benthic  infauna.

The  Everett  Harbor  database,  includes  sediment  chemistry and  biological
information at sites displaying a wide range of sediment contaminant levels.
Therefore,  the  data were evaluated to detect  correlations  that  may reflect
potentiaT cause-effect relationships.   In  this study,  it  was  assumed that
contaminants whose distributions were associated with biological effects had
a higher  potential  for being  causative  agents than contaminants displaying
no discernible relationships.  However, demonstration of actual  cause-effect
relationships would require  confirmation by laboratory toxicity experiments.
Such studies were beyond  the present  scope,  but may prove useful to support
identification of toxic contamination problems  in the future.

     In a  later section,  the  Puget  Sound AET  (Tetra Tech  1986c,  1987) are
used  to identify  problem stations  based  on  sediment  chemistry  data from
previous studies where appropriate biological  effects data were unavailable
(see  Prioritization  of  Problem  Areas  and  Contaminants).    As  part  of  an
ongoing EPA project,   the  contaminant-effects  data from  the Everett Harbor
investigation  will  be incorporated  into  the  SEDQUAL  database  to derive
updated AET.
                                    229

-------
RELATIONSHIPS AMONG CONTAMINANTS, TOXICITY, AND BENTHIC EFFECTS

     This section  examines  the correspondence between the physical-chemical
characteristics  of sediments  and  their  toxicity  to  amphipods  or observed
impacts on indigenous benthic  infaunal taxa.

General Correlation of Indicators

     Significant amphipod mortality  relative  to  reference was found at four
of the 29 test  sites  in  the Everett  Harbor system (P<0.001; see Figure 40).
Significant benthic effects were observed at 11 of  the 16 stations sampled
for benthic infauna (see Figure 50).   In  these analyses, benthic effects were
defined as a  statistically  significant  (P<0.001)  depression  in at  least one
of four major taxa (Polychaeta,  Pelecypoda,  Gastropoda, Crustacea) relative
to conditions at the Port Susan reference area.

     Significant  bioeffects were  measured in  at  least  one  of  the  site-
specific biological tests at all four, stations where EAR exceeded  1,000 for
at least  one  problem chemical  in  sediments  (Stations  EW-04,  EW-07,  EW-10,
and EW-14 in  Table 20).   In other  sediments where there were no significant
toxic responses and benthic  effects  (i.e.,  Stations NG-06, NG-10, and SD-02),
concentrations  of  organic  compounds classified as  problem  chemicals  were
generally  low  (EAR<30),  but  sometimes  exceeded  AET.    For example,  the
concentration of 4-methylphenol  was  1,800 ug/kg DW  (EAR=140),  or 1.5 times
the  HAET,  at  Station  NG-10.   EAR  for  problem  metals at  stations without
significant biological effects ranged up to only about three times  reference
conditions (zinc at Station SD-02)  and were always less than AET.

     Examples  of  relations-hips  between  biological   variables  and physical/
chemical  variables are shown in  Figures  57-62.   These figures were selected
from a complete set of scatterplots developed for the following variables:

          Chemicals:   LPAH,  HPAH,  naphthalene,  phenol, 4-methylphenol,
          pentachlorophenol,   2,4,6-trichlorophenol.  3,4,5-trichloro-
          guaiacol, abietic  acid, dehydroabietic acid, 12-chlorodehydro-
                                    230

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                         234

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and LPAH (n.g/kg dry weight), 4-methyl phenol (^g/kg dry weight), retene
(p.g/kg dry weight), sulfides (mg/kg dry weight), and TOC (percent dry
weight) in sediments.
236

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          abietic  acid,  benzoic acid,  retene,   a  cymene  isomer,  and
          sulfides

     •    Benthic  taxa:   Capitella caoitata (Polychaeta), Euohilomedes
          spp.  (Crustacea),  Psephidia  lordi  (Pelecypoda),  Ax1 PODSida
          serricata  (Pelecypoda),  Crustacea, Gastropoda,   Pelecypoda,
          and Polychaeta

     •    Amphipod bioassay mortality.

The chemicals listed  above  were  selected for this analysis mainly because of
their- high  detection  frequency,  high  concentration,   potential  toxicity,
potential  value as  tracers  of  pollutant  sources,  or   some  combination  of
these  attributes.    Concentrations  of most  of  the  selected  chemicals were
greatly  elevated   above  corresponding  reference  values.     Conventional
sediment  variables "[sulfides,   TOC,  and grain  size  (percent  fine-grained
material)] were also entered in the  analysis.   Relationships of biological
variables to metals in  sediments were not examined because metals concentra-
tions  were  not substantially  elevated in  the  study   area.   The  benthic
species  listed  above were  selected because  they  were widely  distributed in
the  project  area  and  they represented the dominant  species within  their
respective major  taxa at selected stations.  C.  capitata was also selected
because  it is well known as a pollution-tolerant  species. The examples shown
in  Figures  57-62 were  chosen because they  illustrate  some of  the clearest
relationships   between  physical/chemical  and   biological  variables.    The
results  for Polychaeta  and  Pelecypoda were selected because among major taxa
they exhibited  the most depressions in abundance relative to Port Susan (see
Benthic  Macroinvertebrates  in Results section).  Relationships of biological
variables  to conventional  variables  (e.g.,  sulfides,  percent  fine-grained
material)  are   shown  to provide  perspective in  interpreting relationships
between  biological variables  and toxic chemicals.

     A common   feature  of  the  relationship  between sediment  chemistry and
biological variables  is the wide scatter in the sediment toxicity and taxa
abundances at  lower chemical concentrations  (Figures  57-60  and  62).   This
scatter  is  expected  when  relating  a  single chemical   (or  related  group of
                                    237

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chemicals) to  a  biological  variable because at  lower  concentrations of the
chemical  the  biological variable  could be  more strongly  influenced  by an
unrelated chemical  or other factors.   For the  selected  chemical variables
(LPAH,  4-methylphenol,  retene,  and sulfides  in  Figures 57-60  and 62), the
primary  trend  observed  was the  consistent  occurrence of high  values of
sediment  toxicity  and  low  values of benthic  taxa  abundances  at  higher
concentrations of  the chemicals evaluated.  Aside  from £.  capitata and its
respective higher  taxon  (Polychaeta),  all  of the taxa  analyzed were consis-
tently  low in abundance at stations with higher concentrations of chemicals,
including some  of  the  other chemicals analyzed but not shown  here (e.g.,
HPAH, phenol).   C.  capitata  was extremely  abundant  at  Station EW-04 despite
high  concentrations  of  many chemicals  at  that station.   TOC  content in
sediments at Station  EW-04 was 29 percent,  the highest value observed in the
study and among  the highest values found  in  polluted  areas of Puget Sound.
High  abundance  of  C.  capitata  is  typically  an   indicator  of  disturbed
conditions,  especially organically-enriched habitats.

     Most taxa exhibited consistently  low abundances  at  higher concentrations
of sulfides, except C.  capitata and Pol-ychaeta," which  displayed an apparent
linear  increase with  sulfide concentration (Figure 60;  r=0.98, n=19, PO.001
and r=0.94,  n=19,  PO.001, respectively).   These apparently linear relation-
ships were each driven by two points (see Figure 60) and therefore should be
considered tentative.   Nevertheless,   a clear  positive  relationship between
the  abundance  of  C.  capitella  and sulfide  concentration  in  sediments was
found in a recent  study of Elliott  Bay (r=0.70, n=18, P<0.05) (PTI and Tetra
Tech 1988).

     Sediment toxicity as measured  by mortality  in the amphipod bioassay was
generally high at  higher concentrations of 4-methy1 phenol,  retene, sulfides,
and TOC (see  Figure 62).   No clear relationship was found between amphipod
mortality and LPAH  or HPAH.  The amphipod bioassay has previously been  shown
to be  insensitive to a wide range  of  PAH  concentrations  in the environment
(e.g.,  Tetra Tech  1986d).  The  data for the other chemical  variables used in
this analysis  were too limited to  evaluate  their relationships to amphipod
mortality.
                                    238

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     Because  fine-grained sediments were  found  mainly  in  the East Waterway
where  chemical  concentrations  were  also  highly  elevated  (see  Sediment
Chemistry in  Results  section), the  cgvariance of chemical variables (includ-
ing  sulfides)  with  sediment grain   size probably  explains  the  observed
relationships  between several benthic taxa and percent fine-gained material
(see Figure 61).  To  minimize the importance of  chemical factors relative to
physical  structure of  the  sediments,  the relationship of  benthic infauna
abundance to  grain  size was examined using only reference area data.  Based
on  data from  seven stations  in  Port  Susan (1985 and  1986  data combined),
there  was no  apparent  relationship  between  the  abundances  of Pelecypoda,
Axinopsida serricata.  and Psephidia lordi  and percent fine-grained material.
Although  pelecypods were  relatively  less  abundant at the station  with the
largest  fraction of  fine-grained material  (Station  PS-01,  1985,  88 percent
fine-grained   material),   their  relationship  to  sediment   grain   size  was
clearly  nonlinear,  with  maximum abundances achieved  at  stations with about
24  percent  fine-grained  material.   At the Port  Susan  stations,  Gastropoda
showed  no clear relationship  to  grain  size.    The greatest  abundance of
gastropods was found  at Station  PS-01 in  1985,  with 88-percent fine-grained
material.   Euphilomedes  spp.  showed a  trend  toward  increased abundances'in
coarse-grained sediments based on the  Port Susan stations, but the variation
with  grain  size  (on  the  order of  2-4 times)  cannot account  for  tire large
differences in abundance between some  stations in  Figure 61.

     A  positive linear correlation  was found between amphipod mortality and
percent  fine-grained  material in sediments,  although the relationship  does
not  explain  much  of  the  variance   in   amphipod  response   (r=0.57,  n=32,
P<0.001).  Only 33 percent  of the  variance is  explained by a regression of
percent  mortality  against   percent   fine-grained material   [Y=0.641X+13.4
(standard error of  slope=±0.168;  standard error of intercept = 5.68)].  The
relationship   between  amphipod   mortality  and   fine-grained  material  in
Figure  62 is  confounded by high chemical  contamination at some  stations  with
very fine-grained sediments.   Using only  the data  for seven  sediment samples
from Port Susan  (1985 and  1986 reference area data combined),  no relationship
between the amphipod  response and sediment grain  size was found.
                                     239

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     DeWitt  et  al.   (1988)   developed  a  relationship  between  Rhepoxvnius
abronius mortality and percent fine-grained material in  sediments  from  eight
reference  areas  of  Puget  Sound.   Using the method  of DeWitt et  al.  (1988)
to  correct for the  effects of  sediment  grain size,  all  samples  with mean
mortality  values  identified as  significantly  different (P<0.05 or  PO.001)
from reference in the  present study would still be classified as  toxic (see
Sediment Bioassays in  Results section).   The regression equation  derived by
DeWitt et  al.  (1988)  explained  approximately  29  percent of the variance in
the  relationship  between  amphipod  mortality  and  percent  fine-grained
material.   Although  DeWitt  et  al.  (1988) were  able to demonstrate experi-
mentally  that  very  fine  sediments  in  the  silt-clay  size  range  decreased
amphipod survival relative to survival  in coarser sediments, they concluded
that particle  size could not account for all  of the background mortality in
reference  area sediments.   Moreover,  they concluded  that  particle  size  is
probably just  a  variable that is strongly  correlated  with the actual cause
of mortality.  In any  case,  the high amphipod mortalities found for several
stations in the present  study cannot be explained by the effects of sediment
grain size alone.

Relationships  Between Chemical and Biological Variables  in the East Waterway

     Because the most severe chemical  contamination  and associated  biological
effects were found in  the East Waterway,  relationships between chemical and
biological variables were examined  further for this area  (Figure  63).  Six
stations along a nearshore transect formed the main basis for this analysis:
Stations EW-01, EW-04, EW-07, EW-10, EW-12, and EW-14  in order from north to
south.  Two additional stations  (Stations NG-01 and NG-02) from the adjacent
area immediately  south  of  the  East Waterway were  also included to provide
perspective  based  on   relatively  uncontaminated  conditions.    Chemicals
selected for  this  analysis  included  LPAH,  4-methy1 phenol, 2,4,6-trichloro-
phenol,  dehydroabietic acid, and sulfides.  All of these chemicals exhibited
elevated  concentrations   in  the  East  Waterway  and  are  representative  of
important compound classes in that area.  LPAH represents a group  of six PAH
compounds,  with  naphthalene as  a  predominant  component  in  East Waterway
sediments.  Relationships  between biological variables and HPAH were similar
to those shown for LPAH.   4-Methylphenol, an alkyl-substituted phenol, was  a
                                    240

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          20
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                                                             LEGEND
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                                                           NUMBER OF TAXA
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                                                      —*— -  OEHYOROABIETIC ACID

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            NORTH -
                    STATIONS
                               -SOUTH
Figure 63.   Relationships between selected biological  and chemical
              variables in the East Waterway and adjacent areas.
                               241

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problem  chemical   that  occurred  at  substantially  elevated  concentrations
throughout  much  of  the study  area,  but  especially in the  East Waterway.
Dehydroabietic acid,  a  resin acid,  occurred at  very high  concentrations  in
the East Waterway  and had  the highest EAR values among resin acids.  2,4,6-
Trichloropheriol occurred at  less  elevated concentrations than the compounds
above,  but  was selected  to  represent  the  covarying class  of chlorinated
phenolic  compounds  (chlorinated  phenols  and  chlorinated  guaiacols)  often
reported in bleached pulp effluents.  Sulfides were  included in the analysis
because of  their known  association  with  pulp mill  discharges and because of
their extreme concentrations  in the East Waterway.

     The  data  shown  in  Figure 63  indicate  a maximum  biological  impact at
Station EW-01 and  a gradient  of generally decreasing effects toward Stations
NG-01  and  NG-02.    Station   EW-14  exhibited slightly  increased  biological
effects relative to adjacent stations.   Amphipod  mortality  was 100 percent
at Station  EW-01 and generally decreased from north to south toward Stations
NG-01 and NG-02 (Figure 63).   A moderate increase in mortality was observed
at  Station  EW-14  compared  with  adjacent stations.    The 'total  number of
benthic  infaunal   taxa  and   the  abundances  of  Gastropoda  arid  Pelecypoda
increased from Station  EW-01  to  Station  EW-12.   The number of taxa remained
generally high along the remainder of the transect, decreasing slightly from
Station EW-14 to Station NG-02.  Gastropoda abundance decreased consistently
and  Pelecypoda  abundance  fluctuated  from Station  EW-12 to  Station  NG-02.
The abundance  of  total  Mollusca  generally increased from Station  EW-01 to
Station  NG-01,  with a  decrease  at  Station  EW-14 relative  to  adjacent
stations.   The  total abundance  of  benthic  infauna  fluctuated  greatly  from
Station  EW-01  to   Station  EW-10 and decreased  thereafter toward  Station
NG-02.   The high   abundances  of  the  polychaete  C.  capitata.  the crustacean
Nebalia spp., and  nematode worms at Stations EW-04 and EW-10 account for the
peaks  in  total  infauna  abundance at these  sites.   The high  abundances of
these opportunistic taxa and the relatively low  number of total taxa indicate
severely disturbed conditions in the benthic  assemblages  at these sites.  The
crustacean Leptochelia spp. accounted  for the high  abundance of total infauna
at Station  EW-12.   The  presence of this  taxon  and the  relative increase  in
total  number of taxa  indicate less  disturbed conditions compared with other
sites in the East Waterway.
                                    242

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     The  general   pattern of  chemical  contamination  among  these  stations
corresponded to the biological effects pattern (see Figure  63).  However, the
distribution  of  chemical  concentrations  among  stations  differed  among
specific  chemicals.   The  clearest  gradient  relationships  between  single
chemicals  and  biological  variables  were  found  for  sulfides  and  2,4,6-
trichlorophenol.    Concentrations   of  sulfides   and  2,4,6-trichlorophenol
generally decreased from  the head of the East Waterway to Stations NG-01 and
NG-02.   Other  chemicals  that  displayed maximum  concentrations  at Station
EW-01  included  sandaracopimaric  acid,  2,4-dichlorophenol,  2,3,4,6-tetra-
chlorophenol,  3,4,5-trichloroguaiacol,  4,5,6-trichloroguaiacol,  and  tetra-
chloroguaiacol. •  In contrast to the distribution  pattern  shown by sulfides
and  2,4,6-trichlorophenol,  the concentrations of  LPAH,  4-methy1 phenol,  and
dehydroabietic  acid at  Station EW-01 appeared  relatively  low compared to
Stations  EW-04 and EW-07.   Dehydroabietic  acid  concentrations maximized at
Station  EW-04  and 4-methy1 phenol  concentrations  maximized  at Station EW-07.
Finally, concentrations of LPAH, 4-methy1 phenol, and sulfides were higher at
Station  EW-14  relative to those at  Stations  EW-12 and NG-01,  corresponding
to'the  increased  biological  effects  at-that  site.  It should  be emphasized-
that the general  pattern  of decreasing chemical contamination and decreasing
biological effects  from north  to south in  the East Waterway  (see Figure 63)
may  not  represent the actual fine-scale pattern  of chemical and biological
conditions.  Chemical  concentrations at additional stations in the waterway
where biological  variables were not measured suggest a complex  pattern of
contamination  at  nearshore  stations  (see Sediment  Chemistry  in  Results
section).    Most  notably,  Station   EW-13,  which  was  not  tested  for  site-
specific  biological effects,  had  very  elevated  concentrations  of certain
chemicals related to the  pulp industry (e.g., the highest concentrations of
abietic acid,  neoabietic  acid,  and isopimaric acid in the  study).

     Two  potential patterns  of  chemical   distribution  and  effects may be
invoked to explain  the apparent decrease in biological effects  from the  head
of the  East Waterway  to  stations  along the  southern  shore of Port Gardner
(see Figure  63).   First,  a gradient  in concentrations of  a  chemical or  of  a
group of chemicals may correspond to the observed trend in  biological impacts
(e.g., sulfides,  chlorinated phenols).  Second,  a  pattern  of transition  from
                                    243

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one dominant  chemical  to another  in  a complex mixture  may account for  the
gradient  in  observed   biological  effects  (e.g.,  transition  from maximum
sulfides at the  head of the East Waterway to maximum dehydroabietic acid at
Station  EW-04  to maximum  4-methylphenol  at  Station  EW-07).   Although  the
specific chemical  or suite of chemicals  responsible  for biological effects
probably varies  among  stations,  the  major  biological   impacts  observed at
Stations EW-01,  EW-04,  and  EW-07 are likely related to pulp mill discharges.
The contributions of variations  in percent  fine-grained  material and TOC to
the observed  pattern of biological  effects is  probably  minor,  as discussed
previously.    The  extreme  depressions  of  benthic  infauna and  the  high
bioassay mortalities observed  at selected  stations in the East  Waterway
cannot  be  accounted for by  variations  in physical  structure  and organic
carbon content of the sediments.

Comparison of Contamination and Significant Biological Effects

     Both  sediment, toxicity  and  the  number of significant benthic effects
were  generally  high at the  most contaminated  stations.   Among the  23
priority  (Tier  II).  problem stations  identified  in  the next  chapter  (see
Prioritization of Problem Areas and Contaminants), HAET were exceeded for at
least one  chemical  at 21 stations.  Of these  21 stations, sediment toxicity
to  amphipods,  benthic  infauna  abundances,  or both  were  evaluated at  12
stations.   Eight of these  12 stations (=67  percent) displayed significant
toxicity  to  amphipods,  depressions  in   the  abundances  of  major  taxa  of
benthic  infauna,  or both (PO.001).   At  the four  problem stations without
significant biological  effects  (Stations  ES-03,  EW-12,   NG-10,  and NG-14),
concentrations of problem chemicals were  not  substantially higher than HAET
(1-3  times HAET,  with   a  mean  of  1.9  times  HAET).    Seven  of the  eight
stations with  significant  effects exhibited  severe  biological  effects that
were  sufficient  for  problem  area  definition  (i.e.,  >40  percent  amphipod
mortality or >80 percent depression of at least one major taxa of infauna).
Three stations that exhibited  severe  effects  for  both the amphipod bioassay
and indigenous benthic  assemblages were among the highly contaminated sites
in the Everett Harbor system.  These three stations are  listed below:
                                    244

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     •    Station   EW-01,   located   in  the   East  Waterway,  exhibited
          exceedances  of HAET  for  phenol and  4-methylphenol  in sedi-
          ments.   Maximum  concentrations in the study  area were also
          observed   for  sandaracopimaric   acid,   2,4-dichlorophenol,
          2,4,6-trichlorophenol,   2,3,4,6-tetrachlorophenol,   3,4,5-
          trichloroguaiacol,  4,5,6-trichloroguaiacol,  and tetrachloro-
          guaiacol  (AET  are  not  available for these compounds).

     •    Station  EW-04,  located in  the  East Waterway,  displayed HAET
          exceedances  for LPAH,  4-methy1 phenol, phenol, 2-methy1 phenol,
          2,4-dimethylphenol, benzyl alcohol, PCBs, 1,2-dichlorobenzene,
          and  TOC.    The  dehydroabietic acid  concentration  at  this
          station  exceeded   an  EAR  of 1,000  (no  AET  is  available  for
          DMA).    Many  other  compounds   (e.g.,  all  chlorinated  resin
          acids,  PCP,  2-chlorophenol,   and  most  TIO compounds)  had
          maximum concentrations  at  this  station.

     •    Station  EW-07,  located in  the  East Waterway,  exhibited HAET
          exceedances  for  LPAH,  4-methy1 phenol,  2-methy1 phenol,  and
          2,4-dimethylphenol.

Concordance between the biological and chemical  results at these stations and
others that exhibited  significant biological effects was generally reflected
in similar priority rankings based on chemical vs. biological variables (see
Prioritization of Problem Areas  and  Contaminants).

     Although  either  severe sediment toxicity or effects on benthic infauna
were usually  observed at highly contaminated sites,  one exception  to this
trend  is  notable.   Significant,  but not  severe,  biological  effects were
found  at  Station  EW-14 which  had   highly contaminated  sediments exceeding
HAET for  the  following  chemicals:    LPAH,  phenol,  4-methylphenol,  dibenzo-
furan,   benzoic  acid,  copper,  and  zinc.   Among  stations  in  the  Tier  II
problem areas with  a full complement  of biological indicators, Station EW-14
was  the  only  station  that  exhibited a  difference  of at  least  30 percent
between the  separate  priority  scores based  on  chemistry and  biology (see
below,   Prioritization of  Problem Areas  and Contaminants).   Nevertheless,
                                    245

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increased  biological  effects  were  apparent  at  Station  EW-14  relative to
adjacent  sites   (see  Figure  63).    Also,  the  abundance  of  pelecypods was
significantly  reduced at  Station  EW-14  compared  to Port  Susan reference
conditions (PO.001).

     Severe biological effects observed in this study were rarely associated
with  low chemical contamination  (i.e.,  concentrations below  AET).   Severe
biological effects were  sufficient  for  definition of a problem area at only
one station  (Station  SD-01)  where chemical  contamination  was relatively low
(i.e., where LAET were not exceeded for any chemical).  Several benthic taxa
displayed >80 percent depression  at Station  SD-01.   However, swift currents
within  the  delta channel  where  this station  was located  (as  indicated by
bathymetry and coarseness  of the  sediments)  may be responsible for disturb-
ance  of the benthic  community.    The  concentration of sulfides  at  Station
SR-07 was  600  mg/kg  DW,  which is  in the range of  amphipod  and benthic AET
(540-630 ug/kg DW)  currently being developed under  a  separate EPA project.
Severe  depressions  in abundances  of gastropods, pelecypods,  and polychaetes
were  observed  at Station  SR-07.   The low abundances  of  benthic  infauna at
this site may be caused partly by the extreme sediment texture  (95.5 percent
fine-grained material) or  periodic hypoxia due to  poor flushing  within the
marina.  Also,  TBT was detected in  a sediment sample from Station SR-07.

      In  conclusion,  significant  (P<0.001)  biological  -effects as measured by
the  amphipod  toxicity  bioassay  and reductions  in  abundances  of  benthic
infauna  taxa were generally  associated  with  high  concentrations of contami-
nants  in  sediments.    At  the  four  problem  stations without  significant
biological effects (Stations ES-03, EW-12, NG-10,  and NG-14), concentrations
of problem chemicals were  not substantially higher than HAET.

COMPARISON OF BIOASSAY RESPONSES WITH BENTHIC INVERTEBRATE ASSEMBLAGES

     This section  examines the degree of  consistency between bioassays and
benthic  infauna  as  indicators  of  environmental  contamination.  The amphipod
bioassay  represented  the  acute  (10-day)  response of  an  individual  species
(Rhepoxvnius abronius) to  sediment  removed from its natural  setting, whereas
benthic  infauna represented  the in  situ, acute  and chronic (weeks to months)
                                    246

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responses of groups  of  organisms (i.e.,  major taxa).   The objectives of the
following sections  are  to determine whether  the  two  indicators were corre-
lated or displayed similar patterns of statistically significant differences
from  reference  conditions.    Because  the  two indicators measure somewhat
independent biological  responses,  complete concordance between bioassay and
benthic infauna  results  is  not expected.   Comparisons of bioassay responses
with abundances  of benthic infauna taxa were  based on the 16 stations in the
Everett Harbor  system  and  the  three stations  in Port Susan  at  which  both
indicators were  evaluated.

Correlation of Indicators

     The  abundances  of Amphipoda and Gastropoda  were  each  consistently low
at stations that exhibited a mean mortality greater than about 50 percent in
the amphipod  bioassay (Figure 64).  Thus,  the relationship  between percent
mortality in the bioassay and the abundance of amphipods was characterized by
a response  region  (i.e.,  area of consistently  low  mortality)  rather than a
simple  linear  function  (Figure 64).     The  abundances  of  Polychaeta  and
Pelecypoda were  not  clearly related to amphipod mortality.

     PTI  and Tetra  Tech (1988) found  distinct response regions in the rela-
tionships  between  amphipod  mortality  and abundances  of several  infaunal
taxa.   For  example, the  abundances  of  Euphilomedes.  JP. lordi.  and  total
crustaceans  were  consistently  low  at  mean  amphipod  mortalities  above
50 percent.   The amphipod  mortality  bioassay  was  a good predictor  of the
response  of these taxa  at >50 percent  amphipod mortality.  Below 50 percent
mortality in  the bioassay, the  response  of  all  benthic  taxa  evaluated was
variable.

     Tetra Tech  (1985a)  reported a  lack  of linear relationships between the
amphipod bioassay response and the abundances of  the following major taxa in
the Commencement Bay system:   Polychaeta,  Mollusca,  Crustacea,  Echinodermata,
and total  taxa.   Similarly,  PTI and  Tetra Tech  (1988)  did  not find simple
linear  relationships  between  amphipod  mortality   and  the   abundances  of
Euphilomedes spp.,  Pseohidia  lordi.  Qdostomia spp.,  Pelecypoda,  and Crus-
tacea.   As  noted  in  the latter  report, the  wide range of  abundances of
                                    247

-------
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 42.5    127.5    212.5    297.5
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                                             200     600     1000     1400
                                           0     400     800    1200

                                                     Polychaeta
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                                             35     105     175     245
                                          0     70     140     210

                                                   Gastropoda
Figure 64.  Relationships between abundances of selected benthic
            taxa (no./0.1 m2) and amphipod bioassay response
            (percent mortality).
                            248

-------
infaunal taxa at  lower mortality levels in the amphipod bioassay (Figure 64)
may be explained  by the potentially higher sensitivity of indigenous benthic
assemblages  to  toxic  chemicals.   This  higher  relative sensitivity  of the
infaunal assemblages  could result  from chronic  exposure (compared to short-
term  exposure in  the bioassay)  or exposure of sensitive  juvenile  stages
(compared with exposure of adult organisms in the bioassay).

Comparison of Bioassav Responses with  Benthic Groupings

     Values  of  amphipod  mortality were  compared  with  the groupings  of
stations  determined  by   classification  analysis  of  benthic  invertebrate
assemblages  (see  above, Benthic Macroinvertebrates  in Results section).  The
results  of  this   comparison  show  that  the mean  level  of amphipod mortality
differed among groups  of  stations  that differed  in  benthic infaunal  charac-
teristics  (Figure 65).   The mean  bioassay mortality  among  benthic infaunal
Group I  stations  displayed a large range (5-100  percent mortality) relative
to other benthic  infaunal  groups.  Most  stations in  Group  I displayed mean
amphipod mortalities  of.   less  than 35  percent.   Amphipod  mortalities  at
stations in  benthic infaunal  Group  II ranged from 5 to 37  percent,  with a
mean of  18  percent.  The  stations  in  Groups  I and  II  each  exhibited one or
no significant depressions (P<0.001)  of the  four major  taxa used to define
problem  areas (i.e.,  Polychaeta,  Pelecypoda,  Gastropoda,  and  Crustacea).
At Group I  Station NG-04,  only the abundance of polychaetes was significantly
lower than reference conditions (P
-------






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FlK
1
- EW-07

- EW-10

- NG-06

L SD-02/PS-02

- PS-03
- PS-04
1

- NG-03
- NG-02
NG-01
- EW-14




k
- SR-08
- EW-12
- NG-10
I II
I IE Bf
                                                                          LEGEND
                                                                       STATION MEAN

                                                                       MEAN AMONG STATIONS
                      STATION  GROUP
Figure 65.  Amphipod bioassay responses in relation to station groupings based on
           classification analysis of benthic assemblages.

-------
     In co.nclusion,  stations  that  exhibited  the most severe benthic effects
also  displayed  the  highest  toxicity  levels  found  in  the  study.   These
stations were all located in  the East Waterway.  Mean amphipod mortality was
generally  less  than  50 percent at  stations with  little  or no  effects  on
benthic infauna.   A similar  finding was  reported  by Tetra Tech (1985a)  and
PTI and Tetra Tech (1988).

Comparison of Significant Responses

     The  relationship  of significant mortality  in  the  amphipod bioassay to
the occurrence  of at  least  one significant  depression  of a major taxa of
benthic infauna  is  presented in Table  34.   Overall, the concordance in the
responses  of  the bioassay and  infauna  was 56  percent (i.e.,  the percentage
of stations showing  consistent  responses  was about 56 percent).  Because of
the small  sample size  (n=16  stations), concordance for  the study area as a
whole was  not substantially better than that expected by chance alone (i.e.,
50  percent).    Concordance between  the bioassay  and benthos  was  found at
highly  contaminated  sites,   especially  in  the East  Waterway  (see above,
General  Correlation  of  Indicators  in  Relationships   among   Contaminants,
Toxicity,  and Benthic  Effects section).   The lack  of study-wide concordance
between  significant  responses  in  the  amphipod  bioassay  and  in benthic
infauna despite strong  concordance  within  geographically  distinct problem
areas was  also  reported by Tetra Tech (1985a)  and  PTI and Tetra Tech (1988)-
for Commencement Bay and Elliott Bay, respectively.
SUMMARY
          Biological  effects  as  measured  by  the  amphipod  toxicity
          bioassay  and  significant reductions in abundances of benthic
          infauna taxa were generally associated with higher concentra-
          tions of  contaminants  in sediments.

          The  relationship between  sediment  contamination  and  abund-
          ances of  several selected benthic  taxa was  characterized  by  a
          response  region where abundances  were   consistently  low at
          high concentrations of contaminants.  An  apparent threshold in
                                     251

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       TABLE 34.   CORRESPONDENCE BETWEEN STATIONS HAVING
            SIGNIFICANT  (PO.001) BIOASSAY RESPONSES
           AND STATIONS HAVING SIGNIFICANT (P<0.001)
                      BENTHIC DEPRESSIONS
                                      Benthic Depression

       Bioassay Response                Yes         No

              Yes                       25%         0%

               No                        44%         31%
NOTE:   Total  no.  stations = 16.
                        252

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the biological  response was found  for  AxiHODSida serricata.
Euohilomedes spp., Pseohidia lordi.  Pelecypoda, and Gastropoda
in  relation  to  specific  concentrations  of  each  of  the
following chemicals:  LPAH,  HPAH, naphthalene, 4-methylphenol,
retene, phenol, and sulfides. For the other organic compounds
evaluated,  the  number  of  stations  with  detected  values  was
too small  or the distribution of the data  was too skewed to
show a strong association with biological variables.

The abundance  of the pollution-tolerant polychaete Capitella
caoitata  displayed  a  roughly  linear  increase with  sulfide
concentration  in  sediments  and  no  apparent relationship with
concentrations of other chemicals or grain size.

Amphipod mortality was generally high at  higher concentrations
of  4-methylphenol,  retene,  TOC,  chlorinated  phenols,  resin
acids, and sulfides, but was not clearly related to the other
chemical  variables  evaluated.   The  high amphipod mortalities
found  at  several  stations  were not fully explained  by  the
potential  relationship between  sediment toxicity  and  grain
size.

Biological   effects   generally   decreased  along  a  spatial
gradient from the head of the East Waterway  (Station EW-01) to
stations  southwest  of the historical Weyerhaeuser kraft mill
site.  The concentrations of sulfides and chlorinated phenols/
guaiacols followed a similar trend  at selected stations where
biological  variables  were measured.  Concentrations  of some
resin  acids,  4-methy1 phenol,  and LPAH were relatively low at
the head  of  the  East Waterway compared  with the next station
to  the  south   (Station  EW-04),  but otherwise  corresponded
generally  to  the  biological  effects   data.   Although  the
specific  chemical  or  suite  of chemicals  responsible  for
biological  effects  probably varies  among stations, the major
biological  impacts  observed  at Stations  EW-01,  EW-04,  and
EW-07  are  likely  related   to  pulp  mill  discharges.   The
                          253

-------
     observed spatial  gradient is probably  not  representative of
     fine-scale spatial  patterns,  since chemical contamination is
     more complex along a similar  transect when data from chemistry
     only stations are considered.

•    Both  severe  (>40  percent)   amphipod   mortality  and  severe
     (>80 percent)  depression  of at   least  one  major  taxon  of
     infauna  were observed  at the following  highly  contaminated
     sites:   Stations  EW-01,  EW-04,  and EW-07.   Severe biological
     effects  were found  at  only one  station  (i.e., depressions of
     three major taxa at Stations  SD-01) where chemical contamina-
     tion was relatively low (i.e.,  all concentrations were below
     LAET).   Sediment structure  and  physical disturbance  due to
     current  scour  probably  accounts  for benthic  depressions at
     Station SD-01.

•    The  abundances  of  both indigenous amphipods  and gastropods
     were consistently  low at  stations with  >50 percent amphipod
     mortality  in the toxicity bioassay.  The abundances  of. both
     polychaetes  and  pelecypods   were  not  clearly  related  to
     amphipod mortality.

•    Concordance between statistically significant  responses in the
     toxicity bioassay  and  depressions  of  infaunal taxa  was not
     substantially  greater  than  that  expected  by chance  alone.
     This  is  not surprising  given the wide range and  levels of
     contaminants in  the Everett   Harbor  system  and the  different
     endpoints  measured  by  these  two  indicators  (i.e.,  acute
     mortality  of adults of a  single species  in the  bioassay and
     chronic effects on all  life stages  of an  assemblage of species
     in  the  benthic   infaunal  indices).    Moreover,  concordance
     between the bioassay and  benthos was found  at highly contami-
     nated sites, especially in the East Waterway.
                               254

-------
              PRIORITIZATION  OF  PROBLEM AREAS AND CONTAMINANTS
     In this section,  the  selected  data  for  indicators  of sediment  contami-
nation, toxicity,  and biological effects  are integrated to  evaluate  toxic
contamination problems  in  the Everett Harbor system.  The approach  for  the
ranking of problem areas was described earlier (see Decision-Making Framework
in Methods section) and is summarized in  Figure 3.  Based on the significance
and  magnitude  of  EAR  compiled  in  the  Action  Assessment  Matrix  format,
analysis  of  problem areas  and  their priority ranking was performed  in  the
following phases:

     •    Tier  I Problem Definition—Identification of broad  areas that
          exceeded  action-level  guidelines (see  Table 3)  for combined
          significant  elevations  of sediment  chemistry,  fish pathology
          and bioaccumulation

     •    Tier   II   Problem  Definition—Identification  of   problem
          stations  that  triggered  action-level   guidelines  based  on
          significant  EAR  and  exceedance  of a)  the 90th  percentile
          concentration  or  HAET  of  chemicals  in   sediments,  b)  80
          percent  depression of  any  one  of four major  benthic  taxa
          (Polychaeta,  Crustacea,  Pelecypoda,  or  Gastropoda),  c)  40
          percent  mortality  in  the  amphipod  bioassay,  or  d)  any
          combination of the preceding.

Grouping  of  problem  stations into  multi-station problem  areas  was  based on
chemical  distributions  (including data from recent historical studies),  the
nature  and  proximity of potential  sources,  and  geographic and hydrographic
boundaries.

     •    Ranking   of  Problem   Sites—Scoring  of   problem  stations
          following the criteria  in  Table 4, and ranking of each multi-
          station  problem  area  based on the average  of  the  scores for
          individual stations within  the area.
                                    255

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A characterization  of  each Tier II problem  area  based on the distributions
of potential  problem chemicals that  exceeded  AET is  also provided in this
section.

IDENTIFICATION OF PROBLEM AREAS

     Broad areas of the nearshore Everett Harbor system displayed concentra-
tions  of  chemical   contaminants  in  sediments  above  the maximum  values for
Puget  Sound   reference  areas.   Nevertheless,   chemical  "elevations  at most
stations outside the East  Waterway  were  not  highly elevated above reference
values.   Because  neither  bioaccumulation nor pathological  variables were
significantly elevated in the study  area  (P>0.001), Tier I problem evaluation
did  not  result in definition  of  large-scale problem  areas.    Areas  of
potential concern were defined  based  on  exceedance of LAET for at least one
chemical in sediments.  As shown below, these areas of potential  concern are
largely contiguous with the problem areas defined in the Tier II  analysis.

     Information on the  significance of  EAR  for all  indicators,  at each
station was compiled in an Action Assessment Matrix.  Stations identified as
Tier  II problem  sites  (Figure 66)  were  considered  for  further  priority
ranking.   A  matrix  of priority scores  for Tier  II  problem areas  and the
indicators that exceeded action levels  for  severe contamination  and effects
is presented  in Appendix I.

     The following  problem areas containing multiple stations were identified
(Figure 66):

     •    EW  (the East Waterway)

     •    NG  (near  the Mukilteo  sewage  discharge, ferry  terminal  and
          defense fuel storage depot).

In  addition,  the  following  single  stations  were identified as  localized
problem areas:  ES-03, 06-01, SD-01,  SD-03,  SR-05, SR-07 (Figure 66).
                                    256

-------
• NG-09
• NG-10
• NG-11
O
LABELED STATIONS WITHIN
SOLID LINES EXCEEDED HAET
OH TIER II BIOLOGICAL CRITERIA
                                                                  LABELED STATIONS WITHIN
                                                                  DASHED LINES EXCEEDED LAET
                                                                  OR 90TH PERCENTILE CONCEN-
                                                                  TRATIONS FOR CHLORINATED
                                                                  PHENOLSOUAIACOLS AND/OR
                                                                  RESIN ACIDS
                                                                  SMI Titles 07. 38 and Appendix J
                                                                  lot infoimalion on which cftgmicaM
                                                                  eicaeded AET al (he stations shown
                                                                  aoove and a hotoncal alalions.
                                           Figure 66.  Everett  Harbor problem areas.
                                            257

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RANKING OF PROBLEM AREAS

     Ranking of problem areas within the Everett Harbor system was performed
using the Action Assessment Matrix.  Arithmetic mean EAR values compiled for
each data  type and each multi-station  problem area (Tier  II)  are shown in
Table 35.   Reference  values are shown  on  the  right-hand  side of the table.
For  each  indicator,  mean-  reference values  across  all  stations  within the
reference area are shown for comparison. The original value for an indicator
can  be  obtained  by multiplying the EAR reported  in  the table by the appro-
priate reference value.  Only the original  data for the prevalences of  liver
neoplasms  and  megalocytic  hepatosis  are  shown  because the  reference area
prevalences were zero,  resulting  in infinite elevations.at the study sites.
Note that  benthic infauna  EAR are calculated as  the  inverse of the  ratio
used for other  indicators  (i.e.,  as the ratio  of the reference value to the
study site value) because a toxic effect is expected to produce a depression
in  abundance.   Refer to Appendix  I for information on each  station  in the
multi-station problem areas.

     For  perspective  in  interpreting. Table  35,   each  of  the  following
represent  a  severe effect  that is sufficient  for definition of a  problem
area:

     •    >40 percent amphipod  mortality,  which   corresponds  to  an EAR
          of >1.8

     •    >80  percent  depression in  abundance  of one  or  more benthic
          taxa, which corresponds to an EAR of >5

     •    Exceedance of  the HAET or the 90th  percentile  (for selected
          chemicals without AET) for sediment chemistry

     •    Significant elevation of  any  three indicators.

At least one of the four primary conditions just listed are met by each area
shown in Table  35.   Significant EAR  for sediment  chemistry and exceedances
of HAET were found in all o.f the Tier II problem areas  except Station SD-01,

                                    258

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                        TABLE 35.   ACTION ASSESSMENT MATRIX OF SEDIMENT  CONTAMINATION,
                                   TOXICITY, AND BIOLOGICAL EFFECT INDICES
                                       FOR EVERETT HARBOR PROBLEM AREAS
                                                   Problem Area Elevations3
Variable
Sediment Chemistry
LPAH
HPAH
4-methyl phenol
Phenol
2-methyl phenol
2, 4-di methyl phenol
Benzoic acid
Dehydroabietic acid
Benzyl alcohol
PCBs
p.p -DDT
1 , 2-di chl orobenzene
Copper
Zinc
East
Waterway

310
89
1,900
40
40
14
14
430
17
180

20
26
43
Area
NG

31
36
200
24

LJLU
1 120 1

11
2.8
3.0
ES-03

4.4
3.6
110
36

E3T]



3.8
3.6
OG-01

21
8.4
98
14





5.4
4.4
SD-01 SD-03

1.1 9.8
0.70 3.6
0.20 57
3.9

0.50
3.2
f 273"]

2.9 8.2
2.7 4.8
SR-05

21
22
150
3.6

6.9
56
4.2



9.0
5.5
SR-07

12
17
17
ITX

1.4



15
8.1
Reference
Val ueb

<41 ppb
<79 ppb
<13 ppb
<33 ppb
U 7 ppb
U 7 ppb
<150 ppb
<63 ppb
U 10 ppb
<6 ppb
U 10 ppb
U 3.5 ppb
6.37 ppb
19 ppb
Sediment Taxicity

   Amphipod mortality

Infauna"

   Polychaetes
   Gastropods
   Pelecypods
   Crustaceans

Fish Pathology

   Neoplasms'"
   Foci
   Megalocyt'ic hepatosisc

Bioacc mutation
                                        0.68
                                   0.68
                                                   1.5
   PCBs
   PCBs
English sole
Dungeness crab
                      3.5
                      1
                      0.71
3.2
2.1
         2.7
         1.9
         2.7
3.8
2.8
                                     1.7
                                     0.49
                                     0
2.8
0.70
                       22%
                                                                  1,570/mi:
                                                                     50/n£
                                                                  i.seo/m^
                                                                  1,000/m2
                      7.1%
                        0%
8.3 ppb
5.0 ppb
a Boxed  numbers  represent elevations  of chemical  concentrations that exceed all Puget Sound  reference area
values,  and  statistically  significant  (P<0.001)  toxicity and  biological  effects  at one  or  more  stations
compared with reference conditions in Port Susan.  Significance tests were  not performed on the bioaccumulation
data (see Results).   Chemicals shown in  the table had  concentrations exceeding  HAET  or ^EAR >1,000.   The  "U"
qualifier indicates the chemical was undetected and the detection limit  is shown.  The "<" qualifier indicates
the chemical  was  undetected  at one  or  more  stations.    The  detection  limit is  used in  the  calculations.
Infauna EAR are based on the elevation  in biological  effects represented by reductions in  infaunal  abundances
relative to reference conditions.  EAR for all  other variables reflect an increase in the value of the variable
at  Everett Harbor compared with  reference conditions.   Blank spaces in  sediment chemistry columns  indicate
that the chemical was undetected throughout the problem area.

b EAR values shown for  each area are based on Carr Inlet  reference values for sediment chemistry and on  Port
Susan (1986)  reference values  for biological variables.

c Prevalences of  neoplasms  and megalocytic hepatosis at each problem area  are shown  in  table  instead of  EAR
because the reference values were 0%.
                                                  259

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which  exhibited  severe  depressions  in  .the abundances  of  major  taxa of
benthic infauna, but not  significant (P<0.001) amphipod mortality.  Chemicals
that  exceeded  AET  at  each station are  discussed in the  next  section  (see
Chemical Characterization of Problem Areas).

     Total  scores  for  sediment  chemistry  and  biological  effects  were
determined separately  for  each station.  The ranking  criteria  presented in
Table  4 were  applied  to the  Action  Assessment Matrix  for single stations
(Appendix  I).   The score for  each  multi-station  area  was calculated as the
average of the scores  for  individual  stations within the area (for details,
see  Decision-Making Framework  in  Methods section).   Normalized  scores for
the Tier II problem areas and  single stations are presented in Figure 67.

     Of  the  two  multi-station problem  areas,  the  East Waterway  ranked
highest, with  average  scores of 58 percent  for  chemistry and 21 percent for
biology.   The multi-station  problem  area  near  Mukilteo  received  average
scores  of  34  percent  for chemistry and  20  percent for  biology.   Biological
scores  varied  greatly- among stations  within both of these areas.   Sediment
chemistry scores were heterogeneous within the East Waterway, but not within
the NG problem area near Mukilteo.

     Ten stations  scored >50 percent  based  on  either  sediment  chemistry or
biological effects  (Figures 67 and 68).   Of  the  10 highest priority stations,
three scored >50 percent for both sediment chemistry  and biological effects:

     •    Station EW-01

     •    Station EW-04

     •    Station EW-07.

Stations  EW-10,   EW-13,  and  EW-14 scored  >50  percent  based  on  chemical
variables alone.  Stations NG-09, NG-11, SD-01,  and SR-07 scored >50 percent
based on  biological variables  alone.   Station  SD-01 received  a  high score
for  biology  because  benthic  infauna  were  apparently  impacted.   However,
swift currents within  the  delta channel where  this  station was located (as

                                    260

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                    EW-14
                    EW-04
                      -13
                    EW-01
                    EW-07
                      -10
NG-04   NG-10  ES-03  EW-11
  -05     -11  SR-05    -12
  -09     -U           -15


       NG-07  SR-07  OG-01
         -08  SD-03
                    SD-01
                                      100^
                                       80-
                                       60-
                                      40-
                                      20-
                                       0-"
EW-01   NG-09   SD-01
  -04     -11   SR-07
  -07
EW-10  NG-04

NG-10
                                                          EW-14
EW-11  ES-03  NG-05   SD-03
                                                            -12
                                                            -13
                                                            -15
                -07
                -08
                -14
                     CHEMISTRY            BIOLOGY

                          AVERAGE RANK SCORE

                                      LEGEND
                              NG   Nearshore Port Gardner
                              OG   Offshore Port Gardner
                              EW   East Waterway
                              S 0   Snohomish River Delta
                              S R   Snohomish River
                              E S   Ebey Slough


         NOTE:  Limited biological data were available for most stations (see Appendix I).
         Figure 67.  Ranking of single stations classified as problem sites.
                                      261

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                                                                                             EW-04 (C,8)

                                                                                             EW-07 (C.B)
                                                                                             EW-10(C)
                                                                                             EW-13(C)
                                                                                             EW-14(C)
NG-09(8)
NG-11  (B)
                                                                  NOTE:  Problem Stations - HAET or Tier II biological criteria exceeded
                                                                          Problem Areas • Contain several problem stations.  Lines
                                                                          delineating problem areas are estimated boundaries based on
                                                                          available data (including Historical data Irom stations shown
                                                                          in Figures 3 1 -32) and are not highly precise. Stations not
                                                                          exceeding the criteria may exist within problem areas.  See
                                                                          Tables 37. 38, and Apoendix J lor information on AET
                                                                          exceedances at each station.
                                                                         Problem area EW and the single stations wim labels sxmb.ted
                                                                         scores 2 50% for chemistry (C), biology (8), or both (C. 8).
                                                                         Identification of station SD-01 as a problem site is tentative
                                                                         (see text).
                                                  26Z

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indicated  by  bathymetry  and coarseness of the sediments) may be responsible
for  disturbance of the  benthic  community.    Because  bioassay mortality was
low  (15  percent)   at  Station  SD-01,   and  because  species  composition  of
benthic  infauna  indicated  an  absence of   impacts  attributable  to  toxic
chemicals,  the designation  of  Station  SD-01 as  a problem  area  should  be
considered tentative.  Sediment texture, hypoxia,  or high sulfides concentra-
tions at Station SR-07 may  have  contributed to the  severe depressions  in the
abundances  of  infaunal  taxa  at  that site.   Station  EW-14  received the
maximum possible score of  100  percent  for chemistry, but scored very  low  (6
percent) for  biology.  Despite the lack of statistical significance  in  some
EAR  for  biological  variables,  increased toxicity  of sediments  to amphipods
and  effects  on  benthic   infauna  at  Station  EW-14  were apparent  based  on.
comparisons with adjacent stations (see Figure 63).

CHEMICAL CHARACTERIZATION OF PROBLEM AREAS

     In  this  section,   the  Tier  II   multiple-station  and  single-station
problem areas listed above are  characterized with regard to the distributions
of selected problem chemicals  (Table 36) and  other chemicals of-concern.  To
facilitate  analysis by  the Everett  Harbor  Work  Group,  a  description  is
provided  of  the  chemicals  at  notable stations within  each problem  area.
Detailed tables of  AET  exceedances (including the  factor by  which  AET were
exceeded)  are included  in  Appendix J,  and  more  detailed  descriptions  of
chemical distributions are  presented  in the  Results section.  The  following
points  should be  considered  regarding the application  of  AET  to  chemical
data in this  study:

     •    AET  values  have  not  been   established  for  all  chemicals
          measured  in the  present study (most notably,  resin  acids  and
          chlorinated  phenols/guaiacols).     For  this  reason,  another
          criterion  (EAR  >1,000)  was  used   in  addition  to  AET  to
          establish problem chemicals.   Also,  90th percentile concentra-
          tions of  chlorinated phenols/guaiacols  and  resin  acids  were
          used to designate lower priority problem stations.
                                    263

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           TABLE 36.  EVERETT HARBOR PROBLEM CHEMICALS
     LPAHa                           HPAHc'd
     2-methylnaphthalene             butyl benzyl phthalated
     dibenzofuran                    N-nitrosodiphenylamined
     dibenzothiophene                arsenicd
     4-methylphenol                  cadmiunr
     phenol                          lead"
     2-methylphenol                  mercuryd
     2,4-dimethylphenol
     benzoic acid
     dehydroabietic acid"
     benzyl alcohol
     PCBs
     p.p'-ODT
     1,2-dichlorobenzene
     copper
     zinc
a The term  LPAH  represents  the  following  chemicals:   naphthalene,
acenaphthylene,-acenaphthene, fluorene, phenanthrene, and anthracene.

b Established as a problem  chemical  based  upon -EAR>1,000.   No AET
is available for dehydroabietic acid.

c The term HPAH represents the following chemicals:  fluoranthene,
pyrene,   benzo(a)anthracene,  chrysene,  total  benzofluoranthenes,
benzo(a)pyrene,   indeno(l,2,3-c,d)pyrene,   dibenzo(a,h)anthracene,
and benzo(g,h,i)perylene.

d This chemical  exceeded the LAET but not the HAET.  Other chemicals
in this table exceeded the HAET at least one time (except dehydro-
abietic acid, footnote b).
                              264

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     •     AET  for antimony,  chromium,  nickel,  beryllium, and  thallium
           were  not used  to determine problem  stations  in this  study.
           The  AET for  antimony  and chromium were  not  used because  of
           the  likelihood that analytical  methods  used to generate  AET
           for  these  chemicals  are  not  directly  comparable  to  the
           methods  used  in  the  present  study  (see Chemistry,  Quality
           Assurance/Quality Control Results  in  Methods  section).   The
           AET  for  nickel   was  not  used  because  the range  of  nickel
           concentrations  in  the  database  used  to  generate  existing
           Puget  Sound   AET  is  relatively   limited.     Beryllium  and
           thallium  were excluded for similar reasons; the exclusion  of
           these  two chemicals applies only to historical data,  as they
           were not  measured in the  present study.

East Waterway Problem Area

     Sediment  contamination   in  this  depositional  area  is   extreme and
complex.,  and  appears strongly  related  to pulp  industry  discharges.    Addi-
tional  sources  (e.g.,  CSOs  and storm  drains)  may  be   important  for some
chemicals.   The East  Waterway  problem area  contained the  highest sediment
concentration of virtually  every chemical  measured in this study, including
phenolic  compounds  (e.g.,  alkyl-substituted phenols, chlorinated phenols,
chlorinated  guaiacols), resin  acids (both  chlorinated  and  unchlorinated),
PAH,  PCBs, and  most metals.    The  most  severe contamination  was observed
along the  east  shore  of the waterway (near potential sources),  although the
area  near the west shore  of  the  waterway was  less  well  characterized for
certain organic  compounds.

     Although  many chemicals exceeded  HAET in  the East Waterway  problem
area, 4-methylphenol  and LPAH concentrations  exceeded HAET  most frequently
(Table 37) and were important in defining  problem area boundaries.  4-Methyl-
phenol  concentrations   maximized    at  Station   EW-07   (98,000  ug/kg  DW;
EAR=7,500).  Concentrations decreased  along  the  east shore  moving away from
Station EW-07,  but nonetheless exceeded an  EAR  of 1,000  at Stations EW-04,
EW-10,  EW-13,   and   EW-14  (concentrations  ranged  between   15,000  and
35,000 ug/kg  DW  at  these   stations).    LPAH  concentrations   in  the  East

                                     265

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                                                                    TABLE 37.  EAST WATERWAY PROBLEM AREA3
Station
EW-01


BPS30e
E-04f
EW-04


EW-07
PS059
BPS296
PS069
EW-10
EW-11
EW-12
BPS28e
EDS-4h
A41
EW-13

EW-14
EW-15
HAET Exceedances _
LPAH HPAH 4MEPHNL PHNL 2MEPHNL 2,4-MEPHNL BNZACID BNZOH PCBS 1,201 CLBNZ
X X


X X
X X
X XXX X XXX


XX XX
X X
X
X
X X
X
X
X
X

X X

XXX X
X X

CU ZN TOC DHAC TOTXYLENE LAET Exceedancesd
BUTBNZPH, NNP [24CLPHNL, 245CLPHNL,
246CLPHNL, 2346CLPHNL, 345TCG,
456TCG, TETCG, SANDARACO]
PCBS, ZN
HPAH, PCBS, ZN
X X HPAH [2CLPHNL, 24CLPHNL, 2346CLPHNL
PCP, ABIET1C, ISOPIMARIC. SANDARACO
12CLDHA, 14CLDHA]
PHNL [ISOPIMARIC, 12CLDHA]
X ZN
HPAH, PCBS
HPAH
LPAH, HPAH, HG
BNZOH, PHNL

HPAH, PCBS
X PCBS
X
X X PHNL, ZN, HPAH [24CLPHNL. ABIETIC,
ISOPIMARIC]
X X HPAH, AS, CD, PB, HG

a Chemical  codes used in this table:

  LPAH - Signifies AET exceedances  for  the  sum of naphthalene,  acenaphthylene,  acenaphthene,  fluorene,  phenanthrene,  and anthracene,  or any of  these compounds  individually.
         To simplify  the  presentation of AET  exceedances  in this table, exceedances of AET  for 2-methylnaphthalene, dibenzofuran, and dibenzothiophene are included under
         LPAH.   These compounds covaried with LPAH but are not included in LPAH  sums.

  HPAH - Signifies AET  exceedances for  the sum  of  fluoranthene,  pyrene,  benzo(a)anthracene,  chrysene, total  benzofluoranthenes, benzo(a)pyrene, indeno(l,2,3-cd)pyrene,
         dibenzo(a,h)anthracene, and benzo(g,h,iJperylene,  or of any of these compounds  individually.
                    4MERHNL - 4-methyl phenol
                    PHNL - phenol
                    2MEPHNL - 2-methyl phenol
                    2,4-MEPHNL - 2,4-dimethyl phenol
                    BNZACID - benzoic acid
                    BNZOH - benzyl alcohol
                    PCBS - polychlorinated biphenyls
2CLPHNL - 2-chlorophenol
24CLPHNL - 2.4-dichlorophenol
245CLPHNL - 2,4,5-trichlorophenol
246CLPHNL - 2,4,6-trichlorophenol
2346CLPHNL - 2,3,4.6-tetrachlorophenol
PCP - pentachlorophenol
345TCG - 3,4,5-trichlo_roguaiacol

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"FABLE 37.   (Continued)
                    1.2DICLBNZ - 1.2-dichlorobenzene               4561CG  - 4.5,6-trichloroguaiacol
                    CD - copper                                    TETC6 -  tetrachlorogua-iacol
                    ZN - zinc                                      ABIETIC  - abietic acid
                    TOC - total organic carbon                     1SOP1MAR1C  -  isopimaric acid
                    DHA - dehydroabietic acid                      SANDARACO - sandaracopimaric acid
                    TOTXYLENE  - total xylene                       12CLDHA  - 12-chlorodehydroabietic  acid
                                                                   14CLDHA  - 14-chlorodehydroabietic  acid
                                                                   BUTBNZPH -  butyl benzyl phthalate
                                                                   NNP - N-nitrosodiphenylamine
                                                                   H6 - mercury
                                                                   AS - arsenic
                                                                   CO - cadmium
                                                                   PB - lead

   Chemicals exceeding HAET for Puget Sound.   More detailed  information on  exceedances  is presented  in Appendix  J.

 c DHA has no established AET, but was considered a problem  chemical  because concentrations exceeded EAR  of  1,000.   Stations  with EAR >1,000 are noted in this table.

   Chemicals exceeding LAET  for Puget Sound.  More detailed information on exceedances is presented in Appendix J.  Chemicals shown in brackets exceeded 90th-percentile concentra-
 tions for chlorinated phenols/guaiacols and/or resin acids.

 e Crecelius et al. (1984).

 f Battelle (1986).

 9 Storer and Arsenault (1987).

 h U.S. Army COE  (1985).

 1 Anderson and Crecelius (1985).

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Waterway problem area were  somewhat patchy overall,  but the highest  concen-
trations occurred near Stations EW-04 and  EW-07  (LPAH concentrations  in  this
area ranged from 17,000  to  100,000 ug/kg DW, including historical  stations)
and at Stations EW-13  and  EW-14.   Naphthalene was typically the predominant
PAH in the  East Waterway and,  like 4-methylphenol,  occurred at its  maximum
concentration at Station EW-07  (17,000 ug/kg DW; EAR=3,000).

     Many compounds  strongly  related to the pulp  industry were observed at
elevated  concentrations  in  the East Waterway  problem area,  especially at
Station  EW-01   (at  the  head  of the waterway),  Station EW-04,  and  Station
EW-13.   Relationships  between  certain observed  chemicals  and  pulp industry
activities  are  discussed  in the Results section.   Stations EW-04 and EW-13
had the  highest observed concentrations of DMA and  abietic  acid,  the most
prevalent resin acids in the study  (the highest concentrations of both resin
acids were  between  80,000  and  100,000 ug/kg  DW).   Distribution patterns of
resin acids suggested that contamination at Stations EW-04 and EW-13  derived
from  distinct  sources of  a similar nature;  however,  chlorinated  compounds
were  more prevalent at  Station EW-04 than" at Station EW-13.   Chlorinated
resin acid concentrations maximized at Station EW-04, as did 2-chlorophenol,
pentachlorophenol,   2-methylphenol, 2,4-dimethylphenol,  most TIO  compounds
(including compounds potentially related to resin  acids,  such  as retene and
a diterpenoid hydrocarbon), and a  number of other compounds (see Table 17).
Chlorinated  phenols  (dichloro-   through   tetrachloro-)   and   chlorinated
guaiacols had pronounced  concentration  maxima at the head of  the waterway,
at Stations  EW-01  and  EW-02.    Stations  EW-02 and  EW-03  (at the head of the
waterway)  and   EW-05 are  not   strictly  included in  the  problem  area  (see
Figure 66), but are  lower  priority problem  stations  based upon the  exceed-
ances of 90th percentile concentrations for various chlorinated phenols.

     The  contaminant assemblage at Station EW-14 was unique  in the  problem
area,  as  HAET were  exceeded for copper  (1,010  mg/kg DW),  zinc (5,910 mg/kg
DW),  and  benzoic acid  (5,900 ug/kg DW), as well  as  other problem chemicals
that were relatively widespread in  the  problem area (e.g.,  LPAH  and 4-methyl-
phenol).    Copper and  zinc concentrations  were  over an  order  of magnitude
lower at other East Waterway stations.
                                    268

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     Distributions  of conventional sediment  variables  were consistent with
distributions- of organic  compounds that  are likely  related to  pulp mill
activities.   For  example,  TOC  content was  elevated  in  the  East Waterway
overall, but particularly at Stations EW-04 and EW-13 (from 20 to  30  percent
TOC).   Sulfides were  highly  concentrated  (>7,000 mg/kg  DW)  at  the  head  of
the waterway and at Station EW-04.

Problem Area NG

     Problem  Area  NG  was  most extensively contaminated  with  polar  organic
compounds  (i.e.,  4-methy1 phenol,   benzoic  acid,   and  to a  lesser  extent,
phenol),  although  relatively  high concentrations  of   PAH  and  PCBs were
observed in localized  areas (Table  38).  Overall, distributions of  different
contaminants  were  not consistent  in  this  problem  area.   Of  the  problem
chemicals  in  this  area,  4-methylphenol  most  often exceeded  HAET  [Table 38;
Stations  NG-04,  NG-05,  NG-09,   NG-10,  NG-11,  and  NG-14  (intertidal)].
Station  NG-05  had  the  highest  4-methylphenol  concentration  in  this area
(9,700  ug/kg  DW),  with  concentrations  between 1,600 and 2,400  ug/kg DW  at'
the  other  stations mentioned  above.   Concentration gradients  of  4-methyl-
phenol  were  not apparent and  the   stations with  the  highest  concentrations
were not  all  contiguous.   For example, Stations NG-05  and  NG-09  (2,400  to
9,700  ug/kg  DW)  were separated  by a  transect  of  four stations  all  with
concentrations  <1,000  ug/kg  DW.    However,  4-methylphenol  distributions
between the  East  Waterway and this problem  area  suggest a local  source (or
sources)  rather  than  transport  from  the  more  highly contaminated  East
Waterway.

     An area  near the Mukilteo  wastewater  treatment plant and west  of the
Mukilteo fuel  depot had relatively high concentrations  of several contami-
nants in addition to 4-methylphenol (particularly Station NG-09 and histori-
cal  Station  MUK-B).     PAH  concentrations  were  particularly  elevated   at
historical Station  MUK-B (LPAH=11,000 ug/kg  DW;  HPAH=15,000  ug/kg DW).  PAH
concentrations  at  Station NG-09  and  NG-11 were  within  a factor  of  2-3   of
these values, whereas  PAH concentrations at  NG stations  east  of NG-09 were
over 30 times lower.  The PCS  concentration at  Station NG-09 (5,500  ug/kg DW)

                                    269

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                   TABLE  38.   NEARSHORE PORT GARDNER (NG)  PROBLEM AREA3

Station
NG-14
NG-04
NG-05
NG-07
NG-08
NG-09
MUK-Bd
NG-10
NG-11
HAET Exceedances^
LPAH HPAH 4MEPHNL PHNL BNZACID
X
X
X X
X
X
X X
X
X
X

PCBS LAET Exceedances
PHNL



4MEPHNL
X LPAH
HPAH, PCBS
PHNL
PHNL, LPAH

a Chemical codes used in this table:

  LPAH -    Signifies AET exceedances for the sum of  naphthalene,  acenaphthylene, acenaph-
            thene,  fluorene,  phenanthrene,  and  anthracene,  or  any of  these compounds
            individually.  To simplify the presentation of AET exceedances  in  this table,
            exceedances  of  AET for  2-methylnaphthalene are  included under  LPAH.   This
            compound covaried with LPAH but  is not included in LPAH  sums.

  HPAH -    Signifies AET  exceedances for  the sum  of  fluoranthene, pyrene,  benzo(a)an-
            thracene, chrysene,  total benzofluoranthenes,  benzo(a)pyrene,  indeno(l,2,3-
            cd)pyrene,  dibenzo(a,h)anthracene,  and  benzo(g,h,i)perylene,  or  of  any  of
            these compounds individually.

  4MEPHNL - 4-methylphenol.

  PHNL -    Phenol.

  BNZACID - Benzoic acid.

  PCBS -    Polychorinated biphenyls.

b Chemicals exceeding HAET  for  Puget Sound.   More detailed information on  exceedances is
presented in Appendix J.

c Chemicals exceeding LAET  for  Puget Sound.   More detailed information on  exceedances is
presented in Appendix J.

d Mai ins et al. (1985).
                                         270

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exceeded  the HAET,  although nearby stations  had concentrations (or detection
limits)  that  were  over 25  times  lower.    The HAET  for  phenol  was  also
exceeded   at  Station  NG-09  (2,100  ug/kg  DW).    Station  NG-09  was  also
somewhat  enriched in TOC relative to other  NG  stations  (3.8 percent TOC vs.
<0.8 percent at  other  NG stations).

     Benzoic acid concentrations  exceeded  HAET  at  three stations  offshore
from  the  Mukilteo  fuel  depot  (Station  NG-05,  NG-07,  and  NG-08;  1,300  to
.2,100  ug/kg DW).   A transect of  stations was  sampled in this  area [moving
away from  shore:  Station NG-15 (intertidal),  Station NG-06,  Station NG-07,
and  Station NG-08].    Notably,  benzoic  acid  concentrations  nearer  shore (10
to  80  ug/kg DW) were  considerably  lower than  at  Stations  NG-07  and  NG-08
farther offshore.

Problem Area QG-Q1

     The   sole  problem  chemical   at   Station  OG-01  was   4-methylphenol
(1,300 ug/kg  DW)»     Most  other  OG  stations  had  similar  4-methylphenol
concentrations  that   were  slightly  below  the  HAET  but  above  the  LAET
(Stations  OG-02  to OG-06;  720  to  1,200  ug/kg  DW).   Overall,  this  area was
characterized by very consistent  concentrations of  a  number of  chemicals,
including  4-methy1 phenol,  PAH  (dominated  by  naphthalene,  as  in  the  East
Waterway),  resin acids (unchlorinated and chlorinated),  and  a  cymene isomer.
These  chemicals  have  varying degrees of  association  with  the pulp  industry
(e.g.,  of  this  group,  resin acids  are  most  strongly  associated with  this
industry).    Although  such  chemicals could  have been transported from the
East Waterway, several  lines of evidence suggest that contamination  derives
from  the  OG  area  itself   (e.g.,  from  the pulp  industry  discharge  near
Station OG-03):   (1) concentrations  are consistent in the OG  area,  and do not
clearly  decrease with  distance  from the  East  Waterway;  (2) examination  of
chemical contamination along a  transect from Station EW-15  (at  the  mouth  of
the  East  Waterway)  to Station  NG-01 (near  Station  EW-15) to Station  OG-01
(further   from  Station  EW-15)  reveals  that  concentrations  of   several
diagnostic   compounds  (4-methylphenol,   naphthalene,  a  cymene  isomer, the
diterpenoid hydrocarbon TIO) decrease from  Station  EW-15  to NG-01  and  then
increase   at  Station  OG-01  (note  that   resin  acids  were  not  tested  at

                                     271

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Stations NG-01  and  OG-01);  and  (3)  contamination  patterns, within the  East
Waterway (i.e., prominent  concentration maxima for  certain  chemicals)  do not
suggest the presence of strong advection processes.

Problem Area SR-05

     Station  SR-05  was  located  on  the Snohomish  River near  a kraft  mill
facility.   Benzoic acid  and 4-methylphenol  exceeded HAET  at  this  station
(1,000  and  2,000  ug/kg DW, respectively).   The 4-methylphenol  concentration
at  adjacent Station SR-04 exceeded  the LAET  (980  ug/kg DW).   A number  of
resin  acids were  detected at Station SR-05,  including DHA and  abietic  acid
(3,500  and  2,300  ug/kg DW).  Concentrations  of  these resin  acids decreased
moving  upriver from  Station SR-05  to  SR-03, and  were  roughly five times
lower  at  Station  SR-04 than at  Station SR-05  (although these two stations
had similar  sediment  texture).   A chlorinated resin acid  (12-chlorodehydro-
abietic acid)  was detected  below nominal  detection limits at  Station SR-04
(63 ug/kg DW).

Problem Area SO-03

     Station SD-03, located on the Snohomish River delta  near  the  East  Water-
way,  had  concentrations  of  three chemicals  exceeding HAET:   benzoic  acid
(770  ug/kg  DW),  benzyl alcohol  (99  ug/kg  DW),  and p,p'-DDT (23 ug/kg  DW).
The 4-methylphenol concentration  at this station exceeded  LAET  (760 ug/kg  DW).

Problem Area ES-Q3

     Benzoic  acid  and 4-methylphenol  exceeded  HAET at this  Ebey   Slough
station  (760 and  1,400  ug/kg DW, respectively).   The  LAET  for phenol   was
also  exceeded  at  Station   ES-03  (1,200  ug/kg  DW,  blank-corrected).   Concen-
trations of benzoic acid  and 4-methylphenol at Station ES-02 (upriver)  were
at  least 30 times lower than at  Station ES-03.
                                     272

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Problem flr.ea SD-01
     Station SD-01  on  the Snohomish River delta  did  not have any chemicals
exceeding  AET;  it  was  designated as  a problem  station  based  upon benthic
effects  that  exceeded  action-level  guidelines.   EAR  for  Everett Harbor
problem  chemicals  did  not  exceed four  at  this station.   Sediment  at this
station was predominantly coarse-grained (<5 percent fine-grained material).

Problem Area SR-07

     Station SR-07,  located  near  the Everett  marina on the Snohomish River,
was also designated as  a problem  station  based upon benthic  effects that
exceeded  action-level   guidelines;  no  AET  were  exceeded at  this   station.
However,  TBT was   reported  at  0.093   mg/kg  DW  at this  station,   and  the
sediment was very fine-grained  (96  percent  fine-grained  material)  and had a
high sulfide concentration (600 mg/kg DW) .

SUMMARY

Identification of Problem Areas

     •    Broad  areas  of   nearshore   Everett  Harbor  and  the  lower
          Snohomish  River  displayed  low elevations  of chemical  concen-
          trations   in  sediments  relative  to   Puget  Sound  reference
          areas.  Because the area-wide indicators related to bioaccumu-
          lation   and   pathology   were  not   significantly   elevated
          (P>0.001),  large-scale  problem  areas  were  not  identified
          throughout most of the study  area.

     •    Specific  prpblem areas  were  defined on  a  finer spatial  scale
          (Tier II).  Twenty-three stations were designated as problems.
          Seventeen  of  these stations  were grouped into  the  following
          multi-station problem areas:   East Waterway, and the nearshore
          area from  Elliott  Point in Mukilteo east to Powder-mill Gulch.
                                    273

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Ranking of Problem Areas

     •    Ranking  of  Tier  II  problem  areas   showed   that   the  East
          Waterway  was  a  higher  priority  than   the   Nearshore  Port
          Gardner problem area.

     •    Ten stations  were identified as  the  highest  priority sites.
          Of these, Stations EW-01, EW-04, and EW-07 scored >50 percent
          for both chemical and biological variables.

Characterization of Problem Areas

East Waterway Problem Area--

     •    Sediment contamination  in this depositional  area  is extreme
          and complex,  and appears  strongly related to pulp industry
          discharges, although  additional  sources  may be important for
          some chemicals.  The East Waterway problem area contained the
          maximum  sediment  concentration  of virtually  every chemical
          measured  in  this study,  although maximum  concentrations  of
          different chemicals  occurred  at different stations:  Station
          EW-01  (chlorinated   guaiacols  and  dichloro-   through  tetra-
          chlorophenols);   Station   EW-04   (certain  chlorinated   and
          unchlorinated   resin   acids,   some  alkyl-substituted    and
          chlorinated  phenols,  most  TIO  compounds,   and  PCBs;  this
          station  had  the  largest  number  of  exceedances of  HAET and
          90th percentile concentrations  in the study);  Station EW-07
          (4-methylphenol  and  naphthalene);  Station  EW-13  (certain
          unchlorinated  resin  acids);  and  Station  EW-14   (most  PAH,
          benzoic acid, zinc,  copper, arsenic, and other metals).

     •    The  relationship   between  pulp   industry   activities   and
          sediment  contamination was  suggested  by  several   lines  of
          chemical  evidence,   including  distributions   of  distinctive
          geochemical  tracers   (e.g.,   chlorinated  resin   acids  and
          chlorinated guaiacols)  and  related compounds  (e.g., unchlor-
                                    274

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          inated  resin  acids,  chlorinated phenols, retene, diterpenoid
          hydrocarbons),  as  well  as  distributions of  other compounds
          potentially related to the pulp industry  [e.g., 4-methylphenol
          and naphthalene; refer to Tetra Tech (1985a) for a discussion
          of  the  problem  area at  the mouth  of  St.  Paul  Waterway in
          Commencement  Bay,   WA,   where  these  chemicals  were  also
          associated with  a  pulp mill discharge]  and -TOC and sulfides
          distributions.

     •    Significant depressions in the abundances of benthic infaunal
          taxa  were found  at  all  six  stations   sampled  in  the  East
          Waterway  (P<0.001).   Abundances  of three  of  the  four major
          taxa  analyzed were  significantly reduced  at  Stations EW-01
          and EW-07.    Significant  sediment toxicity to amphipods  was
          found  at  three  of  the  six  stations  sampled  in the  East
          Waterway  (Stations  EW-01, EW-04,  and  EW-07;   P<0.001).   The
          mean  amphipod mortality  for all  six stations was  2.9 times
          the mean mortality at the Port.Susan stations.

Nearshore Port Gardner  Problem Area--

     •    The   Nearshore   Port  Gardner   problem   area   was  primarily
          contaminated  with  polar  organic  compounds  (i.e.,  4-methyl-
          phenol,   benzoic  acid,   and  to  a   lesser  extent,  phenol),
          although  relatively  high  concentrations  of  PAH and PCBs  were
          observed  in  localized  areas.   Overall,  distributions  of
          different problem chemicals were not consistent in this area.
          Of  the  problem chemicals  in this  area,  4-methylphenol  most
          often  exceeded  HAET.    Based   upon observed  distributions,
          4-methylphenol  contamination in  this  area  probably  derived
          from undetermined local  sources rather than  transport from the
          East Waterway.

     •    In  the  Nearshore  Port  Gardner problem  area,  a  significant
          depression in the abundance of benthic taxa  was found only at
          Station  NG-04 (Polychaeta;  P<0.001).  Mean mortality  in  the

                                    275

-------
amphipod bioassay was 100 percent at Station NG-04 (P<0.001).
For Problem Area  NG as a whole,  the  mean  amphipod mortality
was approximately 1.7 times the reference value.
                          276

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