United States
Department of
Commerce
             National Oceanic af>d
             Atmosoheric Administranon
             Seattre WA98115
United States
Environmental Protection
Agency
             Office of Environmental
             Engineering and Technology
             Washington DC 20460
EPA-600/7-82-004
February 1982
Research and Development
                             -AGE
A Synthesis of
Biological Data from the
Strait of Juan de Fuca
and
Northern  Puget Sound

Interagency
Energy/Environment
R&D Program
Report
                          Prose::/ Oi
                       Environmental Proia
                        Library
                           ? 1383
                        12CO ijix'.n Ave

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    -M
     ooH
           A SYNTHESIS  OF  BIOLOGICAL DATA
           FROM THE STRAIT OF JUAN DE FUC|
              AND NORTHERN PUGET  SOUND

                        by
                                                        Repository Material
                                                      « 611)13118111
               Editor:   Edward  R.  Long
Pacific Office, Office  of Marine Pollution Assessment
   National Oceanic and Atmospheric Administration

                    Contributors:
                  Alice B.  Benedict
            Western Washington  University

                  Robert D.  Everitt                ^
            Washington  Department  of  Game          9^
                                                                      Q-

                                                             rO(Q V> o *£• Q-
                                                                     co >> «•
                                                                     SSI-
                                                   to "5'
                                                    O ^
                                                                        3
 Co
fr*-
                            Bruce  S. Miller
                       University  of Washington

                            Carl F. Nyblade
                       University  of Washington

                         Charles A. Simenstad
                       University  of Washington

                           Steven  M. Speich                     ^   °
                        Burlington, Washington

                            Terence R. Wahl
                        Bellingham, Washington

                           Herbert H. Webber
                     Western Washington  University

Prepared for the MESA (Marine Ecosystems Analysis) Puget  Sound Project
             Seattle, Washington in partial fulfillment of

             EPA Interagency Agreement No. D6-E693-EN
                     Program Element No.  EHE625-A

                This study was conducted as part of  the
    Interagency Energy/Environment Research and Development Program

                             Prepared for

        OFFICE OF ENVIRONMENTAL ENGINEERING AND TECHNOLOGY
                OFFICE OF RESEARCH AND DEVELOPMENT
                 U.S. ENVIRONMENTAL PROTECTION AGENCY
                        WASHINGTON, D.C.  20460

                            February, 1983
                                                                    RX000037683

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                    Completed as a research task of:
               PUGET SOUND ENERGY-RELATED RESEARCH PROJECT
                   MARINE ECOSYSTEMS ANALYSIS PROGRAM
                  OFFICE OF MARINE POLLUTION ASSESSMENT
             NATIONAL OCEANIC AND ATMOSPHERIC ADMINISTRATION
                                   by
              NOAA - Office of Marine Pollution Assessment
                             Pacific Office
                         7600 Sand Point Way N.E.
                        Seattle, Washington  98115
                               DISCLAIMER


     This work is the result of research sponsored by the Environmental
Protection Agency and administered by the National Oceanic and Atmospheric
Administration.

     The National Oceanic and Atmospheric Administration  (NOAA) does not
approve, recommend, or endorse any proprietary product or proprietary
material mentioned in this publication.  No reference shall be made to NOAA
or to this publication furnished by NOAA in any  advertising or sales
promotion which endorses any proprietary product or proprietary material
mentioned herein, or which has as its purpose an intent to cause directly or
indirectly the advertised product to be used or  purchased because of this
publication.
                                     11

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                                  FOREWORD
     Increased petroleum  transfer and  refining  activities  are expected  in
northern Puget Sound  and  the Strait of Juan de Fuca in the future which will
increase the chances of oil spills into the marine  environment.   A five-year
multidisciplinary  research project, titled  "An Environmental  Assessment  of
Northern Puget Sound and the Strait  of Juan de Fuca," was  initiated  in 1975
to provide  information usable in solving  environmental  questions pertaining
to increased petroleum-related activities.   This project  was funded by  the
U.S.    Environmental   Protection   Agency  and  administered   by  the   Marine
Ecosystems  Analysis   (MESA)  Puget  Sound  Project,  a  part   of  the  National
Oceanic   and   Atmospheric  Administration.    This   report   summarizes  the
biological data collected in this research project as well as those collected
in a  similar  program  conducted  by the  Washington  Department of  Ecology,
titled "North  Puget  Sound  Baseline  Study."  The  report  was prepared by  the
principal investigators who originally collected the biological data.
                                     iii

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                                  ABSTRACT
     This report summarizes the biological  data  collected  during  a five-year
research project, titled "An Environmental Assessment of Northern Puget Sound
and  the Strait  of  Juan de  Fuca."   This  Project was  funded by the  U.S.
Environmental Protection Agency and administered by the U.S. National Oceanic
and  Atmospheric  Administration.   This  report  also  incorporates  biological
data collected during a similar program conducted  by the  Washington Depart-
ment of Ecology, titled "North Puget Sound Baseline Study."

     The report provides an overview of  the geography, geology, oceanography,
and  habitat  characteristics of  the study  area.   Summarized  information  on
food webs,  biological  communities,  migrations,  reproductive  processes,  and
natural stresses is provided.  Major habitat types  are defined and character-
ized by  physical and  biological parameters.   Descriptions are  provided for
the  structures of biological communities associated  with  each major habitat
type;  major  trophic  interactions;  trends  in  organism  density,  community
biomass and species richness; the occurrence of migrants; and the sources and
magnitudes  in community  variability.    Factors important  in  evaluating the
relative significance  of sites  having  certain habitat  characteristics  are
presented.   The  known and  potential  interactions  of biological communities
and  perturbations   are discussed  on  a  habitat  type  basis.   Finally,  an
evaluation  of  the  data  base  is  given  along   with  recommendations  for
strengthening it.
                                     iv

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                                   CONTENTS
Foreword	
Abstract	     iv
Figures	   viii
Tables	      x
Appendix Figures	     xi
Appendix Tables	 .    xii
Acknowledgments   	     xv
Summary and Conclusions 	    xvi

    I.  Introduction	    1

   II.  Characteristics of the Study Area	    3
        A.  Scope	    3
        B.  Geologic History  .....  	    3
        C.  Geologic Setting	;	    6
        D.  Physical Oceanography 	    7
        E.  Biological Oceanography 	   10
        F.  Biogeography	   12

  III.  Biological Community Organization and  Major
        Ecological Processes: An Introduction  	   14
        A.  Concept of Biological Communities  	   14
        B.  Food Web Structure	   15
        C.  Trophic Levels	   15
        D.  Community Stability 	   18
        E.  Reproduction and Dispersal  	   18
        F.  Migrations and Movements	   20
        G.  Natural Stresses	   24

   IV.  Biological Characterization of Major Habitat Types
        of Northern Puget Sound and the Strait of Juan de Fuca  	   26
        A.  Intertidal/Subtidal . . .	   26
            1.   Habitat Definitions 	   26
            2.   Spatial Extent	   30
            3.   Major Biological Assemblages  	   30
                a.  Dominant and characteristic  species of
                    intertidal/shallow subtidal  benthic habitats  ....   30
                b.  Trophic organization  	   42
                c.  Species richness, abundance  and biomass 	   51
                d.  Migrants	   67
                e.  Variability between and within habitat types  ....   70
        B.  Nearshore Waters  	   80
            1.   Habitat Definitions 	   80
            2.   Spatial Extent	   80

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         3.  Biological Associations  	   80
             a.  Community composition	   80
             b.  Trophic organization	   87
             c.  Density, biomass, species richness	   90
             d.  Migrants	   92
             e.  Variability	   96
     C.  Offshore Waters	   97
         1.  Habitat Definitions  	   97
         2.  Spatial Extent	101
         3.  Biological Associations  per Habitat Type  	  101
             a.  Community description  	  101
             b.  Trophic organization	108
             c.  Density, biomass species richness 	  110
             d.  Migrants	113
             e.  Variability	  116

 V.  Identification of Areas  of Biological Importance	  117
     A.  The Need for Identifying Areas of Importance	117
     B.  Importance Factors and Description of Examples  	  117
         1.  Rationale for Approach	117
         2.  Description of Importance Factors and Criteria  	  119
         3.  Factors Important in Evaluating Each Habitat Type ....  123
     C.  Ecological Relationships  	  136
         1.  Habitat-to-Habitat Relationships  	  136
         2.  Importance of Each Habitat to Total System	137
         3.  Importance of Study Area to NE Pacific	138
         4.  Unique Features	139

VI.  Potential Interactions of Habitat Types and Known
     or Proposed Types of Perturbations  	  142
     A.  Summary of Present Pollution Status 	  142
         1.  Oil Spills and Other Industrial Accidents	143
         2.  Oil Refineries and Transshipment Facilities	143
         3.  Habitat Modification  	  144
         4.  Upland Modification	144
         5.  Forest Products	144
         6.  Domestic Wastes	144
         7.  Commercial and Sports Fisheries 	  145
         8.  Mariculture	145
         9.  Recreation, Educational  Activities,
             Scientific Collection 	  145
     B.  General Perturbation Effects on Biological
         Communities	146
     C.  Perturbation Types and Their Possible Effects 	  147
         1.  Oil Spills and Other Industrial Accidents ........  147
         2.  Petroleum Refining, Transshipment and
             Utilization	157
         3.  Habitat Modifications 	  158
         4.  Upland Modification  	  158
         5.  Forest Products	159
         6.  Domestic Wastes	159
         7.  Commercial and Sports Fisheries 	  160
                                   vi

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            8.  Mariculture	160
            9.  Recreation, Educational Activities,
                Scientific Collection ....  	  161
           10.  Miscellaneous	161
        D.  Potential for Cumulative and Long-term
            Subtle Effects  	  162

  VII.  Data Evaluation, Data Gaps, Recommendations 	  166
        A.  Evaluation of the MESA/ WDOE Data Set	166
        B.  Data Gaps	167
        C.  Recommendations for Further Research  	  168

References    	170
Appendix I - Availability and Accessibility of Data Sets	179
        II - Dominant Species per Intertidal/Subtidal Habitat
             Type and Representative Data from Specific
             Sampling Sites 	  199
       III - Percent Occurrence, Mean Density and Standard
             Deviation for Common Bird Species in Intertidal/
             Subtidal, Nearshore and Offshore Habitat Types 	  251
                                      vii

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                                   FIGURES


Number                                                                Page

   1   Primary study area 	   2

   2   General characteristics of an exposed unconsolidated
         beach	   4

   3   Profile view of net circulation at mid-channel in  summer
         between the Pacific Ocean and the head of Puget  Sound   ....   9

   4   Simplified example of a detritus-based shallow subtidal
         food web	17

   5   Examples of exposed and protected unconsolidated intertidal/
         subtidal habitat categories  	   28

   6   Examples of intertidal rock and cobble habitat categories   ...   29

   7   Estimated spatial extent of major intertidal/subtidal
         habitat types in the study area	31

   8   Characterization of rock/cobble intertidal/subtidal
         habitat food web	44

   9   Characterization of exposed unconsolidated intertidal/
         subtidal habitat food web	47

  10   Characterization of protected unconsolidated intertidal/
         subtidal habitat food web	49

  11   Numbers of species of intertidal/subtidal fish and birds
         in the winter at (a) protected habitats, (b) exposed
         habitats,  and (c) rock and cobble habitats	.•  .  .   54

  12   Numbers of species of intertidal/subtidal fish and birds
         in the spring at (a) protected habitats, (b) exposed
         habitats,  and (c) rock and cobble habitats	55

  13   Numbers of species of intertidal/subtidal fish and birds
         in the summer at (a) protected habitats, (b) exposed
         habitats,  and (c) rock and cobble habitats	56

  14   Numbers of species of intertidal/subtidal fish and birds
         in the fall at (a)  protected habitats, (b) exposed
         habitats,  and (c) rock and cobble habitats	57

  15   Abundance of intertidal invertebrates, subtidal inver-
         tebrates,  fish and birds in the winter at (a) protected,
         (b)  exposed,  and (c) rock and cobble habitats	    58

                                    viii

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Number

  16   Abundance of intertidal invertebrates, subtidal inver-
         tebrates, fish and birds in the spring at (a) protected,
         (b) exposed, and (c) rock and cobble habitats	   59

  17   Abundance of intertidal invertebrates, subtidal inver-
         tebrates, fish and birds in the summer at (a) protected,
         (b) exposed, and (c) rock and cobble habitats	   60

  18   Abundance of intertidal invertebrates, subti'dal inver-
         tebrates, fish and birds in the fall at (a) protected,
         (b) exposed, and (c) rock and cobble habitats	   61

  19   Biomass of intertidal invertebrates, subtida'l inverte-
         brates, fish and birds in the winter at (a) protected,
         (b) exposed, and (c) rock and cobble habitats	   63

  20   Biomass of intertidal invertebrates, subtidal inverte-
         brates, fish and birds in the spring at (a) protected,
         (b) exposed, and (c) rock and cobble habitats .	   64

  21   Biomass of intertidal invertebrates, subtidal inverte-
         brates, fish and birds in the summer at (a) protected,
         (b) exposed, and (c) rock and cobble habitats	   65

  22   Biomass of intertidal invertebrates, subtidal inverte-
         brates, fish and birds in the fall at  (a)protected,
         (b) exposed, and (c) rock and cobble habitats	   66

  23   Characterization of nearshore habitat food web  	   89

  24   Mean species richness per pair of hauls  for fish caught
         in tow nets	   91

  25   Mean fish density  (No./n3) per pair of hauls for fish
         caught in tow-nets	   93

  26   Mean fish biomass  (grams/in3) per pair of hauls  for  fish
         caught in tow-nets	   94

  27   Number of species  of  fish caught per  season at  nine near-
         shore sites along the Stait of Juan de Fuca,  1976-1979   ...   98

  28   Density (No./m3) of fish caught per season at nine  near-
         shore sites along the Strait of Juan de Fuca,  1976-1979 ...   99

  29   Biomass (grams/m3) of fish caught per season at nine near-
         shore sites along the Strait of Juan de Fuca,  1976-1979 .  .  .   100

  30   Characterization of offshore habitat  food web  	   109

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                                   TABLES

Number                                                                 Page

   1       Intertidal/subtidal, nearshore and offshore study
             sites per habitat type	.32

   2       Major haul-out areas of pinnipeds in the study area  ....  35

   3       Number of feeding groups  and mean annual standing crop
             in marine habitats of northern Puget Sound and the
             Strait of Juan de Fuca	52

   4       Examples of mean abundance  and coefficients of
             variation for selected  invertebrate species at
             several intertidal sites  in summer  	  75

   5       Extent of nearshore and offshore waters within the
             study area	81

   6       Predominant distribution  of commonly  occurring bird
             species feeding within  nearshore  and offshore water
             columns	83

   7       The 10 most common neritic  fishes of  northern Puget
             Sound and the Strait of Juan de Fuca ranked accord-
             ing to occurrence, abundance and  biomass,  1974-1976   ...  85

   8       Percentage of estimated total winter  populations  of
             major marine birds by species  or  species groups for
             selected offshore regions and  total densities per
             region, 1978-1979   	  	  103

   9       Percentage of selected major wintering bird species
             occurring in offshore waters in  the study area	104

   10       Importance factor/habitat matrix and  sites exemplifying
             each habitat  type	118

   11       Major perturbation  types  and  their  possible effects  in
             the study area	148

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                               APPENDIX FIGURES


Number

 I-A        Locations of plankton-collection sites (1-9)
              and intertidal/subtidal/nearshore sampling
              sites for benthos and fish (1-56)	191

 I-B        Location of marine bird survey transects	192

 I-C        Location of marine bird shore census sites  	  193

 I-D        Location of marine mammal survey sites and
              transects .	194
                                      xi

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                                APPENDIX TABLES
Number                                                                  Page

  I-A   Publications resulting from NOAA/MESA and WDOE
          biological studies 	  183

  I-B   Biological synthesis report: data sets 	  187

  I-C   NODC file type formats for biological data  collected
          in MESA studies	189

  I-D   Sampling site names for Appendix Figure I-A	190

 II-A   Dominant species of marine mammals 	  196

 II-B   Dominant species of marine birds 	  197

 II-C   Dominant species of fish	203

 II-D   Dominant species of intertidal benthos 	  209

III-A   Percent occurrence, mean density and standard
          deviation for common bird species in intertidal/
          subtidal rock (exposed rock) habitat ... 	  248

III-B   Percent occurrence, mean density and standard
          deviation for common bird species in intertidal/
          subtidal rock (protected rock) habitat 	  250

III-C   Percent occurrence, mean density and standard
          deviation for common bird species in intertidal/
          subtidal rock (cobble) habitat 	  	  252

III-D   Percent occurrence, mean density and standard
          deviation for common bird species in intertidal/
          subtidal exposed unconsolidated (mixed coarse)
          habitat	254

III-E   Percent occurrence, mean density and standard
          deviation for common bird species in intertidal/
          subtidal exposed unconsolidated (sand) habitat 	  256

III-F   Percent occurrence, mean density and standard
          deviation for common bird species in intertidal/
          subtidal protected soft  (mud-gravel, mixed fine)
          habitat	258
                                      xii

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Number                                                                  Page

III-G   Percent occurrence, mean density and standard
          deviation for common bird species in intertidal/
          subtidal protected soft (mud-sand, mixed fine)
          habitat	260

III-H   Percent occurrence, mean density and standard
          deviation for common bird species in intertidal/
          subtidal protected soft (mud) habitat 	   262

III-I   Percent occurrence, mean density and standard
          deviation for common bird species in nearshore waters,
          less than 20 m exposed unconsolidated (mixed coarse)
          habitat	264

III-J   Percent occurrence, mean density and standard
          deviation for common bird species in nearshore waters,
          less than 20 m exposed unconsolidated (sand) habitat  ....   266

III-K   Percent occurrence, mean density and standard
          deviation for common bird species in nearshore waters,
          less than 20 m protected soft (mud-gravel, mixed fine)
          habitat	268

III-L   Percent occurrence, mean density and standard
          deviation for common bird species in nearshore waters,
          less than 20 m protected soft (mud-sand, mixed fine)
          habitat	    270

III-M   Percent occurrence, mean density and standard
          deviation for common bird species in nearshore waters,
          less than 20 m protected soft (mud) habitat	    272

III-N   Percent occurrence, mean density and standard
          deviation for common bird species in nearshore waters,
          less than 20 m rock (exposed rock) habitat	    274

III-O   Percent occurrence, mean density and standard
          deviation for common bird species in nearshore waters,
          less than 20 m rock (protected rock) habitat	    276

III-P   Percent occurrence, mean density and standard
          deviation for common bird species in nearshore waters,
          less than 20 m rock (cobble) habitat	278

III-Q   Number of species, total density and total biomass for
          birds occurring in nearshore habitats in spring 1978
          and 1979, combined	280

III-R   Number of species, total density and total biomass for
          birds occurring in nearshore habitats in summer 1978
          and 1979, combined	281
                                     xiii

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Numb er                                                                 PaSe

III-S   Number of species, total density and total biomass for
          birds occurring in nearshore habitats in fall 1978
          and 1979, combined	282

III-T   Number of species, total density and total biomass for
          birds occurring in nearshore habitats in winter 1978
          and 1979, combined	283

III-U   Percent occurrence, mean density and standard
          deviation of common birds in offshore waters, greater
          than 20 m (bays)	  284

III-V   Percent occurrence, mean density and standard
          deviation of common birds in offshore waters, greater
          than 20 m (passages, narrow)	286

III-W   Percent occurrence, mean density and standard
          deviation of common birds in offshore waters, greater
          than 20 m (passages, broad)	  288

III-X   Percent occurrence, mean density and standard
          deviation .of common birds in offshore waters, greater
          than 20 m (open waters)	290

III-Y   Number of species, total density and total biomass
          for birds occurring in offshore habitats in  spring
          1978 and 1979, combined	292

III-Z   Number of species, total density and total biomass
          for birds occurring in offshore habitats in  summer
          1978 and 1979, combined	293

III-AA  Number of species, total density and total biomass
          for birds occurring in offshore habitats in  fall
          1978 and 1979, combined	294

III-BB  Number of species, total density and total biomass
          for birds occurring in offshore habitats in  winter
          1978 and 1979, combined	295
                                      xiv

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                               ACKNOWLEDGMENTS
     The  U.S.  Environmental  Protection  Agency  provided funding  for  the
Environmental Assessment of  the Strait  of Juan de  Fuca and  Northern  Puget
Sound.   Dr.  Howard  S.  Harris, Project  Manager, provided  encouragement  and
prodding to complete this synthesis document.

     Advice,  input,   and   guidance  were  provided  by   Mr.   Fred  Gardner
(Washington  Department  of  Ecology),  Dr.  Rick  D.   Cardwell  (Washington
Department of Fisheries, now with Envirosphere Co.),  Mr. John Sainsbury (U.S.
Environmental Protection Agency),   and  Dr.  Alan J.  Mearns  (U.S.  N.O.A.A.,
Office  of  Marine  Pollution  Assessment).   Mr.  Ronald  P.  Kopenski  (U.S.
N.O.A.A.,  Office  of Marine  Pollution Assessment) provided a  discussion  on
physical  oceanography  and  Dr. Robert  E.  Burns  (U.S.  N.O.A.A.,  Office  of
Marine Pollution Assessment) provided a discussion on  geologic history.  Ms.
Joy Godfrey  and Ms. Ginny  May (U.S. N.O.A.A.,  Pacific Marine Environmental
Laboratory)  prepared  the illustrations  and  Ms. Sharon  Giese prepared  and
edited  the manuscript.   Mr. Sidney  Stillwaugh  (U.S.  N.O.A.A., Environmental
Data  and  Information  Service)  and  Mr.   Michael   Crane  (U.S.  N.O.A.A.,
Environmental  Data and  Information  Service)  provided  discussions on data
management.
                                     XV

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                           SUMMARY AND CONCLUSIONS
     An  extensive qualitative and quantitative data base  has  been collected
for  the  study area.   The data  emphasize  the  algae,  invertebrates,  fish,
birds, and mammals of the  intertidal/subtidal and nearshore habitats.  Though
some topical and  geographic gaps in  the data base exist, a relatively compre-
hensive  understanding of the biology of the area has been developed.

     The study area  lies within the  U.S. portion of  the inland marine waters
of  the  Strait of Juan  de  Fuca and northern Puget Sound  (San Juan Islands and
southern Strait  of Georgia).   Water circulation in  the area  is  driven pri-
marily by freshwater runoff,  causing estuarine flow of surface waters out to
the Pacific  Ocean and deep water replacement  by  highly saline  ocean water.
This  circulation  pattern  is modified by  winds,  storms,  tides,  and  local
topography.

     The characteristics  of the biological  communities are highly dependent
upon the nature of the habitats the  communities are  associated with.  In the
intertidal/shallow subtidal  zones  the habitats are  primarily  defined by the
geomorphology  of  the shoreline.   Certain communities often  associate with
individual  shoreline types  in a  more  or less predictable  fashion.  Major
habitat  types  include:   rock (including  cobble),  protected  unconsolidated
(including  mud-gravel),  and  exposed  unconsolidated  (including  sand  and
gravel).  Several more  narrowly-defined habitat categories exist  under each
major type.  Habitat types are usually not  discrete but, rather, grade into
each other.  About 50% of the shoreline is occupied by exposed unconsolidated
substrates,  about  40%  by rock  and  cobble,  and  about  10% by  protected
unconsolidated substrates.

     The  study  area is   part  of   a  large temperate biotic  province that
includes much of  the West Coast of North America.  None of the biota found in
these studies  are endemic to the  area,  though many are restricted in geo-
graphic distribution to the temperate province of the  West Coast.  Some biota
(especially birds and  mammals)  are migrants and,  thus, spend part of their
life cycles in the study area and part elsewhere.

     The  21 species  of  marine mammals found in the  study  area did not appear
to have distinct  habitat preferences.  Harbor seals,  the most  common species,
haul  out  on  all  intertidal  habitat  types  where  protection  from  human
disturbance and access  to prey are afforded.

     Some  of   the species of marine  birds found  in  the study  area showed
distinct  habitat  preferences,  while others did not.   Bird species  richness,
abundance, and biomass were generally highest in protected areas, including
                                     XVI

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those with muddy intertidal habitats.   Abundance was generally highest in the
fall and winter and lowest in summer.

     Many of the adult and juvenile nearshore fishes encountered in the study
occupy several similar habitat types.   Their habitat preferences often change
during their life cycle.  Species richness and abundance of fish were highest
at protected mud-gravel habitats, such as found at Beckett Point in Discovery
Bay.  Biomass  was highest  at protected rocky reef  and protected mud-gravel
sites.

     Intertidal benthic organisms, those occurring between the +2 m and -10 m
tidal levels, were most abundant at protected unconsolidated  rock and cobble
sites.  Since  many  of the species in protected  unconsolidated habitats were
small (e.g.,  oligochaetes) and  those  in rock  habitats were  large  and  had
shells,  biomass was  highest at rock sites and lower tidal zone cobble sites.
Species  richness  of  benthos was  highest  among  rock/cobble  sites  in  the
intertidal  zone,  intermediate at protected unconsolidated  sites, and lowest
at  exposed unconsolidated  sites.   Eelgrass meadows   are  likely  important
sources of  primary  production.   Exposed unconsolidated beaches were the most
impoverished habitats because of the abrasive action of the constantly moving
beach material.

     Migrants  may be very  important  to the biology of some  habitat types.
For example, protected unconsolidated habitats were found to be important for
migratory seabirds.  Pacific herring were common  (in the  spring)  at specific
sites with coarse gravel or cobble intertidal habitats.  Juvenile salmon were
found at exposed unconsolidated habitats.  Two species of migratory sea lions
occupied certain rocky sites.

     Rock/cobble intertidal habitats have highly complex and diverse food web
structures.  Herbivorous  and  suspension-feeding invertebrates were common at
most sites.  High standing stocks of predators  such  as seastars, gastropods,
and  fish were common, preying upon herbivores  and suspension-feeders.  Food
webs  at  exposed unconsolidated habitats are based  upon detritus transported
from  adjacent  kelp  beds,  eelgrass beds, and saltmarshes.  Detritus-consuming
invertebrates were most common in  this  biologically  impoverished habitat and
are  often preyed upon  by carnivorous  invertebrates,  birds,  and fish.  Food
webs  are  highly diverse in protected  unconsolidated habitats  and  are based
upon  detritus  generated   from  macroalgae,  eelgrass,  and  saltmarsh plants
growing  in  the  habitat   and elsewhere.   Deposit-feeding  polychaetes  and
bivalves  and  suspension-feeding  bivalves   are  preyed  upon  by carnivorous
seastars,  fish, and birds,   Epibenthic  zooplankton are  also  very important
prey  items for nearshore  fishes  in this habitat  type,

      The sources of variability  in biological characteristics  of  each habitat
type  differed  among the biotic  groups.  Some variability was  due to  sampling
and data interpretation procedures; other sources were  related to the natural
seasonal,  annual,  geographic, and cyclical processes  that occur  among marine
biota.

      Nearshore  habitats,  defined here as the water  column from the high tide
line  to the 20 m depth contour,  supported numerous birds, fish, and mammals.
                                      xv n

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Food  webs  are primarily  based upon  phytoplankton  production.   Herbivorous
(suspension-feeding)  zooplankton are preyed upon  by  carnivorous zc^plankton
and  fish, which,  in  turn,  are  prey for birds and mammals.  Bird density a.iid
biomass  in summer appeared to be highest  in nearshore waters at exposed mixed
coarse and protected  rock  sites.   In the  winter nearshore waters at protected
rock  and protected mud-gravel had  highest bird density and biomass.

      Nearshore fish  density, biomass, and species richness varied widely due
to  episodic  catches  of  schooling  fish.   Species richness  was  highest  in
spring at  most sites and in the  protected regions of  the eastern Strait of
Juan  de  Fuca.  Densities were highest at  rock and  cobble  sites  in the spring
and  summer and along the  Strait.   Density values  generally followed those of
species  richness.   Harbor seals  occurred in  all nearshore habitats  year-
round.  Some  cetaceans  (whales and  porpoises)  frequented these areas while
foraging, and  sea lions were found there  in winter months, especially in the
Strait.

      The offshore  waters,  defined  here as greater than 20 m deep,  occur in
the  outer parts of bays,  in narrow passages, in  broad passages, and in open
regions  (e.g., western Strait).  About 88% of the  water surface in the study
area  covers depths greater than 20 m.

      The offshore  food webs are similar  to  those of  the nearshore waters;
they  are based upon  phytoplankton  production  and successive consumption by
zooplankton, fishes,  birds, and mammals.  Diatoms contribute to much of the
phytoplankton  biomass.   Large   quantities of copepods,  juvenile  fish,  fish
eggs,  and invertebrate larvae occurred among  the  zooplankton.  Offshore bird
populations were  composed of large numbers   of  a  relatively  few species when
compared to nearshore habitats.   Loons,   grebes,  murres, cormorants, ducks,
and  gulls were common.   The majority of many  of these species wintered in
offshore waters.  Small populations of minke  and killer whales  and sea lions
were  important  top  carnivores  in  offshore  waters.   Western  Grebes  were
abundant in offshore  bay waters;  Brandt's Cormorant,  Bonaparte's  Gulls,  and
Arctic Loons were abundant  in  narrow passages;  Common Murres and Rhinoceros
Auklets  were common in broad passages and open waters.

     The factors  which are important  in evaluating the  relative biological
significance  of a  site  vary  according   to  the  habitat type.   A  list  of
"Importance  Factors" was  generated  and  described and  examples were given.
Though some sites with definable  habitat  characteristics may be found to be
highly important  to  marine  biota,  ail sites  and all habitats are parts of an
overall  system and, as such, are not necessarily  expendable.  The importance
of some  sites with  certain habitat types goes  beyond the study area.   For
example, migratory salmon,  seabirds,  and  marine  mammals enter the  area yearly
from  other North American areas  or other continents.   Many populations of
invertebrates  are important as  brood stock  for  colonization  of  adjacent
areas.   At least  12  subregions  are identified  as  unique in  terms  of the
abundance and/or type of biota  found there.

     The   study   area  is   generally   free  of  pollution  and  other  human
perturbations, though the  effects  of  some human  activities  have  been docu-
mented.   The actual  and potential  effects of perturbations  vary according to
the type of stress.  The habitats  most susceptible to stress  also vary

                                     xvili

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accordingly.  However, protected bays  and  unconsolidated intertidal/subtidal
habitats appear  to  be most sensitive, especially to the effects of oil.  The
consequences of  oil spills and other  perturbations  may be  either immediate
and  acute  or  long-term and  subtle;  and  they  may be  either  magnified or
partially mitigated by sc.as other stress.

     While the data set collected during the Washington Department of Ecology
(WDOE) and Marine  Ecosystems  Analysis (MESA) studies  is  extensive,  a number
of data  gaps became  apparent during the studies and  during this synthesis.
Nearby geographic areas where no similar comprehensive data set was collected
include  the  Saratoga Passage/Skagit Bay area, outer  coast,  Admiralty Inlet,
the central and southern basins of Puget Sound, and Hood Canal.  Topical gaps
include characterizations of:  meiofauna; saltmarshes; offshore deep benthos;
nearshore plankton;  offshore  fish;  nearshore/rocky kelp bed  fish;  and ceta-
ceans.   Additional  data  are  also  needed  to  understand  the  ecological
relationships of the  biological  communities  in the study area  and the rates
and  limiting factors in processes,  such as  primary,  consumer, and detritus
production.
                                     XIX

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                              I.   INTRODUCTION
     An extensive biological  data  base has been developed  in the Strait  of
Juan de Fuca and northern Puget Sound area (Figure 1) under research programs
sponsored by the U.S. Environmental Protection Agency  (EPA),  administered  by
U.S.  National   Oceanic  and  Atmospheric  Administration   (NOAA)   and  the
Washington Department of Ecology (WDOE).  Data were collected during numerous
separate  studies  conducted  from  1974  through  1979.   These  studies  were
initiated in response  to  anticipated increases  in the use  of  the  area for
transport and/or processing of crude oil.  The objectives of the studies were
to characterize the major components of the marine biota of  the area and,  if
possible, to establish a quantitative baseline  against which changes caused
by any significant petroleum-related perturbation could be measured.

     The majority of data-collecting activities were terminated by the end of
1979, though some monitoring activities will likely  continue into the 1980s.
Research was  conducted to  characterize  the  algae, macroinvertebrates,  fish,
birds, marine mammals,  and plankton.  The results have  been published  in a
series  of  technical documents  (Appendix Table  I-A)  and  two summary reports
(Gardner,  1978; Long,  1980)  available  through  the respective  sponsoring
agencies.   However,   since  each   technical  document  only  deals  with  a
restricted biologic  group, their  utility individually in  shoreline manage-
ment,  project  planning,   and habitat  protection  decisions is  restricted.
Also, the utility of all  the documents together is  limited,  since the indi-
vidual  studies  were  not always conducted  in  the same areas, during the same
times,  or using  comparable  or  compatible  methods.  Finally,  some of the
observations made and conclusions  formed by the  individual investigators were
not necessarily reported in any of the technical documents,  and  thus are not
readily available to users.

     The overall objective of this document is  to provide a compilation and
synthesis of the major results of the biological  studies performed under the
sponsorship of  EPA/NOAA and WDOE,  such  that  the results can be  more easily
used  in  decisions  and policies  regarding  shoreline management,  resource
utilization  planning,   research  project  planning,  and   habitat  protection.
Though  these data were collected with  the primary intent of  applying them to
estimates of  potential and actual biological  changes caused by petroleum-
related  activities,  they  can also  be  used  in assessing other  types  of
projected perturbations.

     This document was  planned, assembled, and written by a multidisciplinary
team, composed  of the original principal  investigators  of  the  EPA/NOAA and
WDOE sponsored biological  studies.  The  expertise  of  the  team included marine
mammalogy, ornithology, fish  ecology,  benthic  ecology, and trophic  dynamics.

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 Each team member was responsible for providing his  or her expertise to the
 team, as well as analyses and interpretations of other data sets.
                   STRAIT
                        OF
                   '••L GEORGIA
VANCOUVER
   VANCOUVER
         ISLAND
              CANADA
            Blame
            ERRY PT.
             JKV. Bellingham
                                       3    DJW
                          VICTORIA"V  vr»t^^>«®yRMACORTES
                                      AWest Beac
                                     Partridge Pt.
                   PORT ANGE
                                 Admiralty Inlet
                                    Puget Sound
Figure 1.  Primary study area (shaded)

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                      II.  CHARACTERISTICS OF THE STUDY AREA
II. A. Scope

     This document  focuses  upon  the U.S. waters and shorelines of the Strait
of Juan de Fuca, San Juan Islands, and southern Strait of Georgia (Figure 1).
This  area extends  from Cape  Flattery  east  to Point  Wilson, north  to  the
Canadian border.  The area includes the marine waters between Bellingham and
Anacortes, but  excludes  the areas east of Whidbey Island.  The relationships
of  the study  area  to  Puget  Sound,  Admiralty  Inlet,   Pacific  Ocean,  and
Canadian portions of the Strait of Juan de Fuca and Strait of Georgia will be
expressed where data are available.

     Emphasis wirJ.- be placed  upon the intertidal/shallow  subtidal  (+2 m to
-10 m) benthos and  tidepool  fish;  nearshore (0 to -20 m)  fish,  marine birds
and marine mammals;  and  open water  ( > 20  m)  birds and mammals of the region
(Figure 2).   Some  open water plankton, pelagic fish,  and  deep  benthos data
will  be  included,  but not  emphasized.   Since the majority of the  data were
collected  in  nearshore  and  intertidal  habitats,  those  areas   will  be
emphasized.

     Quantitative data collected as components of the NOAA  and WDOE sponsored
projects will be used as the primary information sources,  supported by other
data  sets that  are  applicable   to the  area  and  the  objectives  of  this
synthesis.   Most  quantitative  data were  archived in  standardized computer
formats by investigators supported by the NOAA/MESA Puget Sound Project.

     Additional NOAA sponsored research  concerning the  oceanography  of the
Strait of Juan de Fuca, the behavior of surface drifters, the  existing levels
of  petroleum   hydrocarbons,   the  processes  that  influence  the  fate  of
hydrocarbons, and   the  effects of crude  oil  upon  recovery of  intertidal
communities  has been conducted.   These research projects have been reported
elsewhere and will not be included  in this synthesis, though some conclusions
from  these  projects will  be utilized in  discussions of the oceanography of
the area  and of the consequences  of  oil  spills.   Reports  of  these projects
are available through the NOAA/MESA Puget Sound Project Office.

II. B. Geologic History

     The geologic history of the study area has involved three basic kinds of
processes.  The basic structure is  the result of regional tectonic processes,
where  the movements of  the earth's  crustal plates  have resulted in stresses
upon  and  upheavals  of  the surface.   The  major landforms  and shape  of  the
surface are the result of glaciation during the Pleistocene Epoch.  The shape

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                     Intertidal
                        Subtidal
                                Nearshore
            -I-2m
           tide level
                0 tide level
Offshore
                                             -20m'depth  •'••"•'•"
Figure 2.   General  characteristics of an exposed unconsolidated
           beach.

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of beaches and shorelines has been further modified by post-glacial sea-level
changes and the action of riverine and marine shoreline erosion.

     The  structural  development  of  the western  ranges  of North  America,
including the  Cascades  and Olympics  of Washington and  the Insular Mountains
of  Vancouver  Island,  took  place during  the Cordilleran mountain-building
process.  During  a period  beginning  about  200  mybp  (million years  before
present), interactions  between western North America and the oceanic area of
the Pacific  took  place  in a zone of  crustal convergence marking  the  inter-
section of  two crustal  plates.   This convergent interaction gave  rise  to a
sequence of events which resulted in a westward building (accretion) of North
America's western boundary as new crust was added to the continent.

     However,  several anomalous features do not clearly  fit into  a general
description  of the major structures,  principally  the transverse (east-west)
trend of the Strait of Juan de Fuca and the extreme age of  some  of the rocks
found  in  the  San  Juan  Islands.   These local structural trends  appear to be
related to differences in rates and type of convergent plate processes caused
by  interaction of  the  Juan de Fuca  plate  and  the western margin of North
America.  At  any  rate,  the fundamental  structural  framework was established
by 50-25 mybp with  the development of the Olympic Mountains.

     Pleistocene glaciation had a major effect on shaping  the surface form of
the study area.   On a global scale, the Pleistocene was marked by four major
advances  of  glacial ice  moving  across  northern North  America  and Europe.
Locally, this epoch was marked by persistent glaciation by alpine glaciers in
the Cascades,  Olympics,  and Insular Mountains, but  the  dominant invasion of
the  region  was  by the Cordilleran  Ice Sheet.   This center  of glaciation
occurred  during  the same period  of  time as the major  continental glaciers
that  moved  over   central  and  eastern  North  America.   However,  it  was
independent in origin, resulting from accumulation of glacial ice originating
in  the  mountains  of  British  Columbia  and  on  Vancouver  Island.   This
accumulation of ice filled the Georgia Depression and, impeded by the Insular
Mountains of Vancouver  Island,  moved out  of the  Georgia Depression around
Vancouver Island.   The  southward moving ice  overran the  San  Juan Islands,
scouring  even  the  highest hills,  and  moved  to the eastern end of  the Strait
of Juan de Fuca.  Here its progress was  stopped by  the Olympic Mountains  and
the ice  split  into two lobes.  One,  moving south into the Puget Lowland, is
termed  the Puget  Lobe and played  a  dominant role in the  formation of Puget
Sound.   The  other,  the  Juan de  Fuca  Lobe,  moved seaward out  through  the
Strait of Juan de Fuca.

     The effects of this glacial  activity are very evident  in the study area.
The smoothing  and  rounding of the San Juan Islands,  erosional  deepening of
Haro  Strait,  East  Sound,  and Rosario  Strait,  and  glacial grooving in many
places  are evidence of  the  erosive power  of the  ice which covered the  San
Juans  to  a  depth of more  than  700 meters.   Depositional  processes  left much
of the eastern and  southern  portion of the Puget Lowland buried under a great
thickness of glacial deposits.   To a  lesser degree,  the deposits from  the
Juan  de  Fuca  Lobe are found  along  the  shoreline  of the  Strait  in  many
localities.   Many  of  today's shoreline  features  and marginal  deposits along

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Whidbey  Island,  near  Dungeness Spit,  on northern  Quimper Peninsula,  and
elsewhere show clear evidence of their glacial origin.

     Following  the final  retreat  of the  Cordilleran Ice Sheet, recent  and
on-going wave action, worldwide  sea-level changes, and deposition of riverine
sediments  modified  the   shorelines  to  today's conditions.   The  relative
importance of the  processes varies  geographically.  Vigorous wave action  has
eroded  rocky  headlands  and formed  wave-cut benches in  the western  Strait of
Juan de Fuca.   Recent increases  in  sea level have resulted in  submergence of
some shoreline  features.   Deposition of riverine sediments has created broad
tidal  flats  in  some areas, particularly  in  the Bellingham Bay/Padilla  Bay
area.

II. C. Geologic Setting

     The  coastline  of  the  study  area  consists of  distinct   forms:   rocky
shores, sand,  gravel and  cobble beaches;  gravel and  sandspits; mudflats  and
mixed  mud beaches  in protected bays and  harbors.  The recent material that
formed the shorelines has  come from three main sources:   (a) erosion of rocky
headlands  (e.g.,  the  San Juan Islands  and  much of  the Strait of  Juan de
Fuca);  (b)  redistribution of  unconsolidated material  deposited by  glacial
action  (e.g.,  Whidbey  Island); and  (c)  deposition of  riverine  sediments
(e.g., Padilla  Bay).

     Rocky headlands erode slowly  relative to unconsolidated  shorelines  and
bluffs.   The  rate  of  erosion, however,  is   increased by  abrasion  from
waterborne  materials   such  as  logs,  sand  particles  and  flotsam;  waves;
repeated freezing  and thawing of water in  the cracks  of rocks; and the boring
activities of animals  such as  urchins and molluscs.  Tides and storms also
greatly increase the  rate  of wave  erosion.  The large waves driven by storm
winds  during   periods  of high tides  most  likely  carry  the maximum  of
waterborne materials.   In  some areas, such as  the western part of the Strait
where  large  waves are  common,  wave-cut  terraces  occur commonly on rocky
shores.

     Waves,  winds,  and repeat  freezing  and  thawing  also  cause erosion of
glacial deposits,  usually  found  in  the area as bluffs.   Where wave action and
littoral  drift  (long-shore  currents)  are adequate  to suspend the eroded
material,  transport  and   redistribution   take   place.  Littoral  drift  is
produced  by  the  energy  of waves striking  the shore  at  an  angle,  tidal
currents, winds,  and net  estuarine flow.   Transport  of  these materials will
occur  as  long  as  sufficient   turbulence exists  to  keep  them suspended.
Deposition often occurs in areas of low turbulence,  such as in the lee of a
sand spit or  in a protected embayment.   This deposition may  lead to further
growth of a  sand spit, such as at Dungeness Spit.   Resuspension  may occur
during  episodes  of  strong  winds,   waves,  or currents.   The  finest, lowest
density particles  remain suspended  the longest.

     The beach  is  not well-developed in areas with active erosion.  A wavecut
terrace is usually the  dominant feature of the  intertidal zone  at erosional
beaches.  The beach  proper is  generally  a narrow belt near  or at the high
tide line.  There is no  backshore development.   At beaches  where there is

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neither  active  erosion nor  accretion  of  material,  but  where  longshore
transport  is  present,  the foreshore  is  relatively  steep,  no  offshore  bar
forms, and the backshore is not well-developed.  In areas of active accretion
of  sediments,  beaches  show  their  greatest  development:   the  foreshore  is
well-developed and  relatively wide,  offshore bars may  be present,  and  the
backshore is characterized by berms and sand dunes (Figure 2).

     Riverine particles consisting of glacial deposits, sediments eroded from
uplands, and organic debris arrive at the estuaries in greatest volume during
periods of high  flow.   Where these particles  are  exposed to  adequate  long-
shore currents and energy, they remain suspended for a considerable time,  are
transported for many kilometers, and may be eventually deposited  in  a bay or
harbor or  some  other area where currents  are weaker.  However, where river-
borne sediments enter a protected estuary, they are rapidly  deposited in  the
mixing zone where  freshwater  and saltwater meet.  Marshes and/or deltas with
shallow offshore flats may then be produced.   Eelgrass and marsh plants tend
to accelerate sedimentation by reducing wave energy and long-shore currents.

     Due to the forces of erosion and accretion,  the  coastline is constantly
changing with  time.  In  some areas  the change is  rapid.  Actively eroding
cliffs and sand  or gravel spits may  increase or decrease up  to  a meter  per
year.  Other  areas  such  as rocky  shorelines erode  slowly.   Gravel or sand
beaches  acting  primarily in  sediment transport  may  accrete  or  erode only
millimeters per year.

II. D. Physical Oceanography

     The  study area  is  decidedly  marine  in character with  water  salinity
approaching that of  the Pacific  Ocean (29 to  31  parts per thousand  °  /oo  )•
Salinity  is  often  lowest  in the  eastern and northern  portions  due to  the
influence  of  the  Fraser  River  and   other  freshwater  sources.   Surface
temperatures  range  between 8 °C and  11° C; the west portion  of the Strait  of
Juan  de Fuca  is  warmest  due  to  the  influence  of  Pacific  Ocean water.
Temperature and salinity are often relatively  uniform from the surface  to the
bottom  in  the deep  channels  during  the winter.  During  the  summer a weak
pycnocline  (density layer)  often  forms  at  50-100  meters,  and  surface-to-
bottom temperature differences approximate 4^ and salinity differs  by about
3°/oo .   This water column  structure  appears  to  be  influenced mainly  by
salinity and  is  easily disrupted by  fall and winter storms,  at which time
considerable vertical mixing  is possible.  Small-scale  horizontal variations
in  water characteristics  can be  influenced  by   tributaries,  tidal eddies,
upwelling,  downwelling,  local  winds,  tidal   fronts,  bathymetry, and  embay-
ments.

      The  Strait of  Juan  de  Fuca  is  a weakly  stratified,  partially mixed
estuary with a surface-to-bottom salinity  difference  of  2-3%o ,  a 3-4  meters
spring  tide  height,  and strong tidal  currents of 77-154  cm/sec  (1^-3  knots)
(Herlinveaux and  Tully, 1961; Rattray,  1967).  The  estuarine circulation  in
the  Strait  consists of a well-developed two-layer pattern, with  near-surface
velocities  directed westward  at   20-40 cm/sec  and  deep  layer velocities
directed  eastward  at   10  cm/sec.   Over  time  scales  of 4-6  hours,  tidal
currents dominate the flow  regime.  Currents  of 200-250  cm/sec (4-5 knots)

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are common in the more restricted passageways of the San  Juan  Islands  and in
Admiralty  Inlet.   The  along-strait  mean  flow  is  characterized  by  the
classical estuarine circulation with westward transport near the  surface and
eastward transport near the bottom  (Figure 3).

     The circulation  of  the southern Strait of Georgia and  San Juan Islands
area  is poorly  documented.   However, the  influence  of  the Fraser River is
very evident and adds to the net southward transport of surface water through
Haro  and Rosario  Straits  and,  to a lesser  degree,   through  the  San Juan
Archipelago.

     Nearshore  currents (or  littoral drift) are  poorly  known in  the study
area.   However, a few  generalizations   can be  formed  from existing data.
Eastward  transport of  suspended  sediments  and  floating  materials  along the
southern shore  of  the strait is indicative of the  eastward drift there.  Ediz
Hook  and Dungeness  Spit have formed by deposition of material  originating
from the west.   Littoral drift in  the southern Strait of Georgia and San Juan
Island  area is  highly variable, but net  transport  is southward.

     Water currents  in  the area are  caused  by  freshwater runoff,  tides, and
winds.   The circulation in the deep channels  is maintained  by  river water
which enters  and sets up  a  longitudinal sea-surface slope directed seaward.
The near-surface flow  is  driven primarily  by  this slope,  while the deeper
flow  is driven by  the longitudinal density  gradient.   These  two driving
forces  are balanced by the internal and  bottom frictional forces generated by
the strong tidal mixing.   Freshwater  input is primarily from the Fraser River
through the Strait  of  Georgia and tributaries  to  the main basin of Puget
Sound.  The Fraser River accounts for approximately  70-75% of  the freshwater
discharging into the Strait  of Juan  de Fuca (Herlinveaux'and Tully,  1961).
Most of the  riverine drainage  areas  are high  mountain  regions,  and  winter
snow storage  plays  a major role  in establishing the  runoff  which normally
commences with  spring thaws in March  and attains maximum discharge in July.
Prior to  entering  the  eastern basin of the Strait of  Juan  de  Fuca, these
diluted  freshwater sources are tidally  mixed in  the passages leading through
the San Juan  Archipelago  and across  Admiralty  Inlet.   This  tidal mixing,
therefore, has  a moderating effect on the seasonal salinity fluctuations in
the strait.

     Tidal  currents  dominate  the  flow  regime   in  the  study area.   They
constitute navigational hazards and  tend to disperse floating and  dissolved
constiuents  away from shorelines and  to  concentrate  them in nearshore eddies
and fronts.   Both the diurnal and semidiurnal tides enter the strait from the
Pacific  Ocean  as  a  progressive  wave   and  propagate  eastward where their
interactions lead  to semidiurnal mixed  tidal currents  in the  eastern basin.
As each wave  propagates  through   the  topographically  complicated  San Juan
Archipelago, it  produces  complex current patterns in this region with strong
tidal  currents in Haro and Rosario  Straits and Admiralty  Inlet.

     The predominant winds along the  Washington coast are southwesterly  (from
the southwest)  in the  winter and  northwesterly  in summer paralleling the
general  coastline.    In  the Strait of Juan de  Fuca the winds are strongly
influenced by orographic (mountain) effects  and tend to be directed along the

                                      8

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                   OCEAN
                 ENTRANCE
                      0
 E
.x
X0.5 -
0.
Ld
Jl
   .0
               DISTANCE
          100        200
                      J_
NLAND (km)
     300
 STRAIT OF
JUAN DE FUCA
                                                                    400
                                               MAIN BASIN
                               GREEN POINT-
                               VICTORIA SiLL
      Figure 3.  Profile view of net circulation at mid-channel  in
                summer between the Pacific Ocean and  the  head  of
                Puget Sound (from Ebbesmeyer et al.,  1979).
                Notation:  dashed line equals depth of  no-net-
                motion (approximately 50 m).

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axis of the Strait.  During summer, the northwest coastal winds  are  funneled
up-strait  (eastward)  and  generally  decrease  in  strength  with  distance
eastward.  Over 75% of all winds at Port Angeles during summer  are  from the
western quadrant.   Winds over the  San Juan Island/southern Strait of Georgia
area are  generally from the  south  or southwest, except  in the winter  when
northerly winds occur over Haro  Strait and west of it.

     Winds  play  only a weak   role  in  modifying  near-surface  circulation
(Holbrook et al.,  1980).  However,  results from surface drift sheet and drift
card studies (Ebbesmeyer et al.,  1979) suggest surface winds are an important
small-scale  factor  in  the  dispersion  and  transport  of  surface  trapped
contaminants.   By contrast,  strong  southwesterly  winds  associated  with
episodic  storms  dramatically  affect near-surface circulation  (Holbrook and
Halpern,  1977;  Holbrook et al.,  1980).   The effect  of  these storms  in the
Strait  of Juan de  Fuca is  that  the  usual  seaward estuarine flow  in the
surface layer is  reversed, causing  eastward  intrusions of warmer ocean water
and retention  of surface water  within  the  system.   The  intrusions have been
observed for periods  of  up to 10 days with maximum speeds of 20 cm/sec as far.
east as  Dungeness Spit  and they occurred during 35%  of the time observations
were made.   Satellite  infrared  imagery  indicate the  intrusions may  reach
eastward  as  far  as  Whidbey Island.   Although intrusions of  coastal water
generated by coastal  southwesterly  winds  are  common  during  winter, they have
been observed year-round.

     The   complex  oceanographic   processes  outlined  above   are   further
complicated in  numerous  local areas by upwelling, downwelling, tidal fronts,
eddies,  and  other  features.   In  the  event of  an  oil  spill  these  highly
unpredictable features could play a significant role  in the transport of oil.

II. E. Biological  Oceanography

     All  the  biological communities and processes  to be  discussed  in this
report  are  directly  or indirectly influenced  by  numerous  oceanographic
processes.   Some  of  the  physical oceanographic  processes  were discussed
above.  Unfortunately, very little  is known  of  the biological oceanography of
the study  area,  though  data exist  for  the adjacent waters  of the Puget Sound
central basin and  the Strait of  Georgia.

     The factors  that control phytoplankton production  are numerous and the
relative importance of each varies geographically.   Stockner  et  al.  (1979)
ranked grazing, nitrates, and light in  decreasing order of  importance for the
Strait of  Georgia.   Winter  et  al.  (1975)  found  that  nitrates  control and
stimulate primary productivity and  rarely, and  only briefly, become exhausted
and limiting  following  intense  blooms  in  the  Puget  Sound  central  basin.
Certainly, all  these factors and others  work in combination to regulate the
timing and rates  of primary productivity.   Stabilization and  stratification
of the water column  and increased sunlight are  necessary in the spring to
stimulate phytoplankton  blooms.  Replenishment  of  depleted  nutrient  levels
during the fall and winter months must occur  so that  elevated nutrient levels
exist when the  sunlight and water  column conditions are optimal.  Nutrient
replenishment occurs primarily as a result of advection and mixing of oceanic


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water  (Winter  et  al.,  1975) or, in  the  vicinity of major rivers such as the
Eraser, as a result of runoff (Stockner et al.,  1979).

     Water  column stratification is  most distinct  in the deeper  areas and
rarely occurs in  the narrow and shallow channels and passages separating land
masses.   Stockner et  al.  (1979)  found  that a distinct halocline existed
during the winter throughout  the Strait of Georgia,  except  in the  turbulent
passages of  the San Juan Islands and Canadian Gulf Islands.  They found that
nutrient  levels  were  highest  in  these  well-mixed  areas.   Turbulence  and
mixing in these passages is a result of strong tidally-induced currents.

     Phytoplankton blooms  in  the area seem to begin most often  in  April or
May  (Stockner  et  al.,  1979;  Winter  et  al.,  1975)  though  a major bloom was
noted in June of  1976 and none was observed during  bimonthly surveys in 1977
(Chester  et al.,  1980).   Stockner et al.  (1979)  estimated  that mean annual
production varied from 150 g C/m2 in the Fraser  River  plume to over  500 g C/m2
in  sheltered waters  of  inlets and  averaged 345  g  C/m2 for  the  Strait of
Georgia, but, later, estimated  annual production at 250-350  g C/m2  (Stockner
et  al.,  1980).   Parsons  et al.  (1970)  estimated  annual productivity to be
about  120 g  C/m2 and,  later,  argued  that  the  estimates  of  Stockner and
associates  were  incorrect  (Parsons  et  al.,  1980).   Winter et  al.  (1975)
estimated  annual productivity  for  Puget  Sound  to be about  465 g  C/m2 and
attributed  the  high  rate  to   persistent  upwelling of  nutrients and viable
algal cells.

     Diatoms  appeared to be  the major  component  of  Strait  of Juan de Fuca
phytoplankton  communities during  the mid-spring  and  early  summer; whereas
microflagellates  were dominant  in  late  fall and  winter months (Chester et
al., 1980).  Diatoms appeared to be  dominant  in  the Strait of Georgia  during
the spring  and  fall, while dinoflagellates were  common in August (Stockner et
al.,  1979).   Drastic changes in phytoplankton  composition and density  occur
spatially and  over short  (two week)  periods,  as  many  species  seem to occur in
patches.

     While  water temperatures,  nutrient levels,  and  salinities  generally are
uniform  throughout the  study area,  local  phenomena such as the  influence of
rivers,  upwelling in  turbulent passages,  sewage outfalls,  and  tidal  fronts
may  cause considerable variations in  these  parameters  in  small areas.  The
productivity and  composition of biological communities often  vary in response
to  these local situations.  For example,  nutrients and  prey  are brought to
the  surface by turbulence in narrow channels and over sills,  and thus  create
attractive  feeding areas for marine birds.   Productivity is also often high
in  protected embayments where  nutrients  and  organic matter are  delivered by
rivers or sewage  inputs  or  produced  by in situ degradation or organic debris.
Water  temperatures are often relatively  high in protected embayments  due to
warming  by  the  sun  and  negligible  flushing, possibly  increasing  microbial
degradation rates.

     Production of macroalgae  which occur over much  of the  hard-substrate
intertidal,  subtidal, and nearshore zones,  although  limited in  areal  extent
to  the lighted depths, may actually match or surpass  that of  phytoplankton.
The  contribution of  attached plants  to total  carbon production is greatest in

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shallow bays where  eelgrass (Zostera marina) thrives, along rocky  or cobble
shores and over shallow rocky reefs where macroalgae are abundant.

     Webber  (1981)  summarized  the small  amount  of plant productivity  data
available for the study area.  Most marine plants are annuals.   Growth begins
in  early  spring,  is maximum in  spring  and summer,  and declines to  a minimum
in winter.  Timing of growth and productivity varies from species to species.
A  production rate  of  up to  100  g wet weight biomass per day  per  plant was
measured  in May  for  Laminaria  saccharina  in  experiments  conducted  near
Anacortes.   In  the  same studies, a rate  of 250 g wet weight biomass per day
per plant was measured in August and September for Nereocystis luetkeana.

     The eelgrass Zostera marina is estimated to cove'r about 9% of  the bottom
of  Puget  Sound or  some 4.5  x  10 m2  (Phillips,  1974).   He calculated  that
eelgrass  beds  fixed  1.5  g C/m2/growing  season  day,  resulting  in  an annual
production of 187-1078 g/m2.

     While much of  the plant material  produced  in  the marine  environment is
consumed by grazers, 35-40% of the gross production may be liberated into the
sea  as dissolved organic  matter.  Perhaps  the most important contributions
that marine plants make to  the  ecosystem are as  a  source of detritus and as
shelter and a substrate for attachment  for  a wide variety of organisms.

II. F. Biogeography

     The  study  area  is  part  of  a  large  temperate biotic   province  that
includes much  of the  West Coast  of  North  America.   There is  considerable
disagreement concerning the  boundaries and name of  the province.   The  area
lies  roughly  in the middle of  the  Temperate  Northwest  American  faunal
province  which extends  from  the Aleutian Islands,  Alaska  south   to  Point
Conception, California  (Sverdrup et al.,  1942).   Several authors suggest the
area  is  included in  either an  Aleutian,  Oregonian,  Temperate, or Oregonic
province that variously extends from as far north as  the northern end of the
Gulf of Alaska  south to Cape Flattery  or thereabouts (Hedgpeth, 1957).   The
most inclusive boundaries  may be particularly  reasonable  for  mobile animals
such  as  some fishes,  birds, and marine mammals since they  are the groups
least  restricted  in  geographic  range.    The  habitats  of  the study  area
apparently  support  very   few  or  no  endemic   species;  but  many  of  the
invertebrate and fish  species found there  occur  only in protected  marine or
estuarine waters.   The study area represents  one of the largest expanses of
protected, relatively shallow water of  an estuarine character  found along the
West Coast of North America.  Therefore, it is of  considerable importance to
marine biota that require a protected environment.   All occur extensively in
the temperate latitudes  of the West Coast  of North America and in some cases
beyond to other continents.

     The study area may represent the  end  of the  southern or northern range
of some species.  Except for migratory  animals, the biological communities in
the study  area are very dissimilar to those found in the tropics, but  some
species found in the area also occur in the colder  boreal latitudes.
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      The  phytoplankton and zo op lank ton of the study area are not endemic, but
 represent a varying mixture  of species which are  typically  associated with
 open-ocean,   protected  marine  and  estuarine  environments.   Many  of  the
 attached  flora are  endemic  to  the West  Coast  of  North America  (Abbot  and
 Hollenberg,   1976).   The  kelps are  notable in this  respect,  although many
 genera have representative species elsewhere.  The seagrasses (e.g., Zostera
 marina) are not endemic (Kikuchi and Peres,  1977).

      Among fishes in coastal  North  America,  the  order  Scorpaeniformes  is
 particularly   well-represented.    The  families  Scorpaenidae,   Cottidae,
 Agonidae, and Liparidae all have many endemic West Coast species.  The family
 Embiotocidae is endemic to  the North Pacific, and nearly all of its species
 are found  in North American waters  (Ekman,  1953).   Several  other groups,
 including salmonids, osmerids, and clupeids, also have characteristic species
 in this region.

      Among marine  mammals  there  is  also  a reasonably  distinct  northeast
 Pacific fauna.  Many of the  species that are present in other parts  of  the
 world are  represented  in this  area  by  distinct  subspecies.  Some  of  the
 species undertake long  migrations  from breeding  areas  to  richer  northern
 feeding  areas,  and  their  contribution  to the  species  assemblage  of  a
 particular location  is highly  seasonal.   Gray whales, for  example, migrate
 annually  between Alaska  and Mexico (Everitt  et al., 1980).

     Marine  birds  are even more  mobile than fishes or most mammals,  and  do
 not fit as well into  the biogeographical  boundaries that are useful for other
 groups.   Almost all  species  found  in Puget  Sound migrate seasonally to some
 extent.   The  most  prevalent  pattern  is migration n orth and south along the
 North  American coasts, dispersing  inland  in early summer to  nest  in boreal
 and  arctic  North America.   Nearly  all  species  which  breed  in the  area,
 including various  alcids,  cormorants,  and the Glaucous-winged  Gull,  nest  on
 relatively  small coastal  islands.  A few species, such  as  the Lesser Snow
 Goose  and Common Pintail,  have populations that  migrate to eastern Siberia to
 nest and  winter in coastal North America  (Palmer,  1976).

     Although  this   high  degree  of  mobility  complicates  efforts   to
 characterize  bird  species assemblages, several  points  emerge.   First, very
 few species   that  winter  here are restricted  to  the West  Coast  of  North
America,  and none are unique  to Puget  Sound.   Second,  most of the species
found  along  the  North  American  coasts  are  primarily  found  in  relatively
shallow,  protected  waters.   Concentrations  of  food in  estuaries  and  along
 tidal  fronts  may  also  constitute preferred  habitats,  and  allow  increased
species richness and abundance over  open water  habitat.  Finally, the timing
of migration  creates  assemblages of  species which vary  substantially  over
time  and  space, but  which are nevertheless  reasonably  predictable  over  an
annual cycle.
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                 III.  BIOLOGICAL COMMUNITY ORGANIZATION AND MAJOR

                       ECOLOGICAL PROCESSES:  AN INTRODUCTION
III. A.  Concept of Biological Communities

     A suite or group of  closely  ecologically  associated organisms compose a
biological community.  Ecologically closely  associated  communities,  in turn,
form  the  biological component  of an ecosystem.   The biota  composing these
communities, in  interaction with  the physical  processes,  are  described  in
composite  as  an  ecosystem.    This   sytem   is   characterized  by  a  trophic
structure  (food  web),   energy flow  through  that   structure,  cycling  and
recycling  of  minerals,  diversity  patterns  in   time  and  space,  community
control processes  (e.g.,  predation,   reproduction,  competition), succession,
and internal control processes.   The  primary focus of  this  synthesis  is the
biological  components  of the  marine  ecosystems  of  the study area, and the
following discussions will focus  upon distinguishable biological communities
which have been identified and characterized.

     Since   functional   processes,   rather  than   geographical   boundaries,
characterize biological communities,  we have attempted to view communities on
the basis of organization and trophic relationships.  Thus, those biota which
illustrate   similar   community   structure   and   function,   although   often
physically  separated  in  the  region, will  be considered  as  representing a
common biological  community.   Thus,  any  single community  may  be  found  at
numerous locations.

     Biological communities  will  be  categorized primarily  according  to the
dominant  physical  conditions.   That  is,  a  number  of  diverse  habitats
represented  on a  relatively  large regional  scale will  be  used to illustrate
differences  in biological   communities.   For   example,  intertidal/subtidal
communities  will  be  categorized  according  to  sediment  type and exposure.
Where  the  habitat is  characterized  by a single, visibly  prominent feature
(e.g., kelp beds and eelgrass meadows),  these terms will be used to delineate
the biological communities or modify  the  category.

     The use of physical habitats to  delineate communities is justified since
many  species  show distinct  preferences  for certain  physical conditions.
Comunity  structure and  trophic  structure  can be  fairly  similar  at  widely
separated  places   when  physical  conditions  are  similar.    Therefore,  each
habitat  type can  support  distinct groups  of organisms  although boundaries
between  these  communities  usually are   not  clear-cut.  Habitats  typically
grade  one  into  the  other;  and, therefore,  the  communities  do  as  well.
Biological  communities  described  in  this report are thus  representative  of

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the continuum  of habitat,  community  structure, and  function  throughout  the
study area.

III. B.  Food Web Structure

     Organic matter  and  energy  are  transferred  and  changed  in  biological
communities primarily  by feeding  or  "trophic" interactions among producer,
decomposer, and consumer organisms.  The pattern of material and  energy flow
from  the production  and decomposition  levels  through the various  consumer
levels  is  commonly referred  to  as a "food web."  Food  webs  are  typically
complex.   Most predators  consume many  species  of  prey,  often at  several
trophic  levels.   Any single  prey species  may  be eaten  by many  predators.
Lateral linkages, where one species consumes another of an equivalent trophic
level,  or  feedback linkages,  where prey-predator relationships  are  reversed
during  certain life  history stages,  may occur.   The  early concept of a food
chain,  with single  species  prey-predator  linkages,  is   now  considered  an
oversimplification, as such a food chain is relatively uncommon in nature.

III. C.  Trophic Levels

     Food  web  structure  is  characterized by  organisms  which  synthesize,
decompose,  or  consume organic matter.   The synthesizers  (or  producers)  and
decomposers  each constitute a "trophic  level," while several  trophic levels
may occur among the consumers.

     Primary  producers,  plants which fix  carbon by  means of photosynthetic
processes,  compose the "lowest" trophic  level.  The process of photosynthesis
involves  conversion  of  carbon  dioxide  and water,  using  light  as an energy
source   in  the  presence  of  chlorophyll,   into  organic  matter,   with  a
corresponding  release of molecular oxygen.  The  principal primary producers
found  in the  study  area include  bacteria, phytoplankton, benthic  diatoms,
various macroalgae (including the large kelps  and foliose red,  brown,  and
blue-green  algae), and  vascular  flowering  plants  such as marsh  plants  and
seagrasses.   Since photosynthesis is light-dependent, primary production in
the study area is  greatest in spring  and summer and lowest in  the winter.

     Decomposers  occupy  a trophic  level  parallel  to that  of  the primary
producers.  Decomposers  (or reducers)  are microorganisms,  usually bacteria or
fungi,  which  break down complex  organic material into the simpler compounds
necessary  for primary  producers;  this  process  may be either aerobic (with
oxygen) or anaerobic (without oxygen).   Decomposition may be facilitated by
physical abrasion  and grinding.

      Consumer  organisms  can be categorized  by  the types and number of trophic
linkages occurring between them and a source of primary production.  Animals
consuming  primary  producers  directly are  considered  primary  consumers,  also
termed grazers or  herbivores.  Further categorization  may be made based  upon
the  organisms'  feeding  strategies   and   the  size  of  the  food particles
consumed.   Suspension feeders remove  suspended phytoplankton  and  other  food
particles  from the  water, while  true grazers directly  ingest  particles of
attached microalgae,  macroalgae,  or vascular plants.   Thus, primary consumers
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can include  organisms from  the smallest  pelagic  copepods which  "graze"  on
phytoplankton to geese which feed on seagrasses.

     Secondary  and  higher level consumers are  animals which prey  upon other
animals  and are  referred  to   as  carnivores.   Primary  carnivores  feed  on
primary  consumers,  secondary  carnivores  feed  on  primary  carnivores,  and  so
on.  The animals which occupy  the top of  this  network of  trophic  levels are
termed the top  carnivores and  are not consumed  by other carnivores.  In short
food webs,  the  top carnivores may  constitute only secondary  consumers but
typically are tertiary carnivores.

     Dead organic matter  and the bacteria  which break it down provide  a food
base  for a  series  of trophic levels similar to those based  upon primary
production.   A  variety  of  feeding strategies are known for  detritivores
(detritus consumers).   Some species can directly  graze on organic particles,
some on  the bacteria, and some can prey upon  other detritivorous animals.

     The "classical"  marine food web was  historically considered to be based
upon  autotrophic  production  of  carbon   by  phytoplankton;  consumption  of
phytoplankton  by  herbivorous  zooplankters  with  subsequent consumption  by
carnivorous zooplankters; and  so on up the food web.  This classical food web
was based  upon  offshore  research and  appears to  be  correct for  open water
pelagic  systems.   This  early  concept  has  changed with  the recent  shift  in
research emphasis  from oceanic ecosystems to  emphasis  on shallow nearshore
ecosystems.  It  appears now that shallow  water marine food webs are largely
based  upon   the  heterotrophic  processing   of   detritus  produced  by  the
senescence of marine algae and estuarine  and  saltmarsh vascular plants.  The
contribution  of  eelgrass  to the  pool  of   detritus  has been  especially
implicated as a major source of organic carbon to  nearshore food webs  in the
temperate waters of the North Pacific Ocean  (McRoy, 1970;  Kikuchi and Peres,
1977; McConnaughey  and McRoy,  1979a,b).   Although  grazing  herbivores such as
sea urchins,  isopods, and  brachyuran crabs  directly  consume  macroalgae and
vascular plant  vegetation  in   the nearshore  environs,  most  of the primary
level consumers appear to  be  detritivores  (Simenstad et  al.,  1979).   Thus,
while some  algal organic matter is  directly  transferred to  upper trophic
levels via  these grazers, most of it reaches maturity,  becomes detached, and
ends up  decomposing  on .the  beaches  and in  shallow  subtidal  zones.   It
eventually forms a pool of suspended  and dissolved organic carbon available
for colonization by microflora.  Not all  detritus is  directly  utilizable by
marine detritivores because most marine  invertebrates lack adequate enzymes
to  digest  it.   Thus,   structural- and   nutritional  decomposition  of  the
particles by  marine bacteria  and fungi appears to be a critical process in
conditioning the detritus for  use by  detritivorous fauna.  In fact,  recent
studies have suggested  that the associated microflora may be the  actual food
source of the detritivores  (Mann, 1972a,b;  Brown and Sibert, 1977; Mclntyre,
1969;  Seki, 1966).

     A   simplified   example   of  a   shallow   subtidal   marine   food  web
characteristic  of  Puget  Sound, with an  energy flow  based principally upon
detritus, is illustrated  in Figure 4.
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           Detritus
           Par Ii c I e
Figure 4.   Simplified example of a detritus-based shallow subtidal  food web.

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III. D.  Community Stability

     A persistent  question  has been the existence of  a  relationship  between
the  complexity  of biological communities  or  their food  webs  and  their
"stability"—i.e.,  their  resistance to  collapse into a different,  usually
less diverse,  structure  in the event of a perturbation involving the  removal
of  prey-predator linkages.   Complex food webs are usually those  having many
species  and many  prey-predator  linkages.   Another question is  whether food
webs are actually "unstructured," in which  case consumers randomly  utilize
energy from the pool of available,  catchable  prey species in  trophic levels
above that  of  primary production  (Isaacs, 1972,  1973).

     Considerable  disagreement continues between those scientists who accept
the established  theory  of  increasing   stability with  increasing  food  web
diversity  and  those  who  believe that  randomly connected systems  tend  to
become less stable as the connectance  (number  of linkages) increases.  There
are very few  empirical  data derived from laboratory  or field  studies where
the relationship  of  food  web structure and perturbations has  been  tested.
The closest  example  of experiments directed toward  these ends is  that  of
Paine's  (1966)  manipulation  of   rocky  shore   communities  of  Washington's
exposed  coast  in which removal   of certain  community  dominants  and  their
associated  food web  linkages  was found to  result  in  dramatic  alterations
(changed diversity and connectance)  of the community and food web structure.

     Thus,  relatively complex  food webs  cannot be  considered any more stable
than  less  diverse food webs  if   removal  of ecologically important  taxa  or
trophic  groups can have  an  identical   restructuring  effect.   (Ecologically
important species  are those that  are critical  in maintaining the structure of
a   community.)   Those  species   which   are   ecologically  important  either:
(1) provide the majority of the energy sources for consumer organisms at some
time;  (2)  provide  unique  processes  of  converting  or  transferring  organic
matter  to  states  or trophic levels   in  which  it  is available to  other
consumers;  or  (3)  are "keystones" in the composition  of  the  community and in
the direction  and rate of food web  energy flow, typically through selective
predation or grazing.  In all  cases, these organisms  are responsible  for what
might be  considered "critical linkages" in  the  unperturbed food web,  and the
structure of the community is predicated  upon  their  presence  in sufficient
numbers to  exert a keystone effect.

III. E.  Reproduction and Dispersal

     Reproduction  and dispersal  patterns  of  individual species can  have an
important influence upon the  structure  of  biological communities.  Factors
such as  fecundity  (number  of offspring produced  per individual), timing of
reproduction,  availabilty  of  breeding  areas,   and  ability  and  tendency  of
young to disperse themselves can be as  important as  trophic relationships in
determining  the ways that communities  respond to disturbances.   Reproductive
and dispersal patterns differ  among  biotic groups.
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III. £.  1.  Marine  Mammals.   Of the  nine marine  mammal  species considered
common in the study  area,  only three species  (river otter,  harbor  seal,  and
killer whale) have  been observed breeding here, although two other cetaceans
may  (harbor  porpoise and minke whale).  River  otters  and harbor seals  give
birth to  their  pups primarily on land, while killer whales give birth in the
water.  Pupping occurs  annually  in the spring and early  summer  for  river
otters and mid-summer for harbor seals.  A female killer whale may give birth
only once every  three  to  four years.   Pupping in river  otters and  harbor
seals is  limited to specific sites, generally  on  undisturbed small islands,
making their regional reproductive success vulnerable to perturbation.

     The  dispersal  ability of marine mammals  as adults  is excellent because
of their  tremendous mobility.  Many of the species  found here occur along the
entire coast of North America; some have a worldwide distribution.

III.  E.   2.   Marine  Birds.   Twelve  species   of  marine  birds  out  of  the
approximately  80  species  regularly  reported breed  in  this  region.   All
breeding  species  nest  every year  in  the  spring.  Generally,  nesting  is
localized, site-specific,  and on small islands or  other remote areas free of
human and other mammal disturbance.  Ninety-four percent of the approximately
30,000 regional breeding  pairs nest on a group of islands  off Lopez Island
and on Smith/Minor, Protection, and Tatoosh Islands.

     The  dispersal ability  of marine birds in  most  cases is superb because of
their flying ability.  The  young birds of the  year  may wander far from their
hatching  site.   The  instigation  of breeding  is  usually  delayed for two or
more years,  varying  among the species.  From  what  little  is actually known,
site attachment varies from very strong to weak among both experienced adults
and birds returning  to their natal colony to breed  for the first  time.

III. E.  3.  Marine Fish.   Most marine fish of this region disperse eggs  into
the  water during spawning.   Some   species  spawn  on  intertidal beaches or
deposit   eggs  among  marine  vegetation.    Some   members   of  the  family
Embiotocidae  (sea perches) and a few  other  species develop eggs  internally
and  release  their young as fry.  Eggs of most species remain near  the bottom
with the  major  exception of members  of the family Pleuronectidae  (flounders),
in  which  the eggs  drift near the surface.  Larvae of virtually all species
are  small and  planktonic.   Except for  members  of  the genus  Hexagrammos
(greenlings)  in  which  larvae  drift  near   the  surface,  fish larvae  are
distributed  throughout the water column.

     Marine  fish here reproduce generally once a year in  the late  winter and
early  spring.  Spawning  and  egg brooding  in  species which guard  eggs  are
often  localized  and habitat  specific.   Herring  spawning,   for example, is
restricted  to   intertidal  cobble   beaches.    Reproduction  success  varies
tremendously  from  year  to year among  those  commercial  species studied by
fisheries biologists.

     Unlike  marine  mammals  and birds  which disperse only as  adults, or
young-of-the-year,  marine  fish  have  excellent  dispersal  ability  both as
adults and larvae.   Eggs  and  larvae may  drift considerable  distances before
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metamorphosis  and maturation  take place.  All  species  have strong swimming
capabilities and wide geographic ranges.

III.  E.  4.  Marine Benthos.  Among  the benthic plants  and animals  of this
region, the method  of reproduction varies across the entire spectrum known to
biologists:  asexual,  sexual,  haploid/diploid phases, direct development, or
complex life histories with  several larval phases.

      Benthic organisms  reproduce at least once each year and reproduction in
most  is  strongly seasonal, usually peaking  in late winter  to  early  spring.
In  general,  reproduction occurs where he adults are found, not in different,
specialized  breeding   areas.    Reproduction  success  among   some  benthic
organisms  in this  region is known to  occur in multi-year  cycles and, thus,
can be highly  unpredictable.

      While planktonic invertebrates have a  high  dispersal  ability as larvae
and adults,  virtually all  adult benthic organisms  have  very limited  or no
dispersal  ability.  For many  of them  reproduction involving  a planktonic
larval stage is  critical for dispersal and recruitment to new areas.  Despite
the importance of planktonic larvae for dispersal, a planktonic larval stage
is  not  universal among benthic  organisms.   Many produce eggs  which  develop
into  benthic  or epibenthic  larval or  juvenile forms.   Nonplanktonic life
cycles  are  almost  universal  among  small  benthic  crustaceans,  nematodes,
flatworms,  and  oligochaetes.   They  are very common among polychaetes  and
occur even among  some bivalves,  gastropods,  sea stars, and sea cucumbers.

III.  F.  Migrations and  Movements

      In normal use, the  word migration simply  means  to move  from one place to
another.   When applied to animals, it has a special meaning:  a migration is
a   repeated  movement  with  the   seasons,    and   implies   a  "once-a-year"
periodicity.   The  most  obvious  examples of migrants are provided by birds.
Birds  have  been  classified  and  reclassified   as   to   types  of  migratory
movement.  Unfortunately, many  of these schemes  are too  rigid  to apply to
mammals and fish.   Small fish may be carried  passively  hundreds  of miles by
oceanic currents  and what may be no more than  a dispersal could then have all
the appearance  of  a  true migration.   The   relative  importance  of  active
migration versus  passive transport has been  difficult to  assess among fish.

     The definition of migration as a class  of movement which impels migrants
to  return  to  the region from  which they have  migrated is used here.  Note
that no distinction is made between active  and passive migrations.  The word
"impel" is used  in the  sense  of biological necessity.   The more  spectacular
migrations are usually  for  feeding or  spawning purposes,  although  another
reason might be to  secure more suitable  climatic  conditions.

III.  F.  1.  Marine Mammals.  The term migration  as it applies  to marine
mammals  (and many  terrestrial  mammals  as  well),   refers   to  long distance
movements of a specific  population or major segments  of a specific  population
(often differentiated  by age-class or sex), usually in   response to specific
biological or  environmental  factors.   Availability  of   food  resources and,
secondarily,   breeding   areas,  appear   to  be major  factors  which   induce


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migrations  (e.g.,  gray whales).  Shorter, "local" movements  of animals from
one feeding area to another nearby or from nonbreeding  to  breeding areas are
generally  not considered  migrations (e.g., killer  whales in  Puget  Sound).
Both of  these generalized movements have been  documented  in the  study area
for certain species of marine mammals.

     Cetaceans  (whales,  porpoises,  and  dolphins)  are  observed in northern
Puget  Sound most  frequently  in the  spring  and summer  months.  The reduced
frequency  of observations  in  fall  and  winter months suggests   there  are
seasonal movements  to  and from the  area.  The  extent of these movements and
the numbers of animals  involved are poorly known.    It  would  be premature at
this time  to consider  most cetaceans  as being migratory  through the study
area.   The  biases within the existing  data  (generally  greatly  reduced
censusing  effort  in  winter months) make  it   difficult  to know  what these
movements represent (Everitt et al., 1980).

     The  migratory behavior   of  the  gray  whale,  which  passes  through
Washington coastal waters, are well-known.  Essentially the entire  population
of  11,000-15,000 animals  passes through Washington  coastal waters  southbound
to  breeding  areas in  Baja  California,  Mexico  in  November and December and
northbound  to feeding  areas in the  Bering  and  Chukchi Seas from February to
April.   Occasionally, individuals or small groups of animals  wander into the
Strait of Juan de Fuca and Puget Sound during these  migration periods. ;.

     The natural history  of the pinnipeds  (seals  and sea lions) frequenting
the study  area  is better understood  than that  of  cetaceans.   Thus, seasonal
movements are easier to detect.  The most abundant marine mammal in the study
area,  the  Pacific harbor seal, is  essentially  nonmigratory.   The  California
sea lion and  northern sea lion  are seasonal migrants with individuals of both
species appearing in the study  area  in the fall  following the breeding season
and  leaving  the  area  by  late spring.   Two other  pinnipeds,  the northern
elephant  seal and  northern  fur seal, occur rarely  in the study area during
offshore movements  in the spring and fall.

     It  is presumed that  the  greatest  species diversity  of  marine mammals
occurs in spring-summer with greatest abundance  in mid- to  late summer.  This
influx  of  animals  most  probably is in  response to  increasing abundance and
diversity of  suitable prey throughout the study  area.

III. F.  2.   Marine Birds.  The  term migration in reference to marine  birds
generally  means  the movement of birds  over large geographical areas, i.e.,
the  North American continent,  the  Western  Hemisphere,  the Pacific Coast of
North  America,   or the North   Pacific  Ocean.    Migration  is  a twice-annual
event,  with  one movement  in  the  spring  from wintering  areas  to breeding
grounds, and the other in the  fall, when birds move  from  breeding areas to
wintering  areas.   In  some species  there is essentially  no  migration, with
adults and  young staying relatively close  to  the  nesting area, but  this is
not common.

     The  rate at  which  migration occurs  is variable between  species,  and
varies  in date  from  year  to  year.  Adults  in some  species  migrate before
young  birds  are ready to leave nest areas.   Some  species  move slowly, with

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one or more  stop-over areas In which  they forage  or  may even molt,  before
continuing  on  the  migration.    Other  species  fly nonstop  for  tremendous
distances, often without feeding  or stopping.

     Large-scale migrations  occur in the  study area, though actual migratory
movements  are  not  often  readily  apparent  but  are   chiefly  evidenced  by
presence/absence  patterns  which  may  change overnight  or within a few days.
Imbedded  within these  large-scale  movements are  other movements, often  of
major  local  proportions,  i.e.,  movements  from one feeding area  to another,
movements from  night  roosting to  daytime  foraging areas.

     Many  of  the birds  that breed  in the study  area appear  to  spend the
winter in the area.   Dispersal  by young birds from a breeding  colony  may be
rapid  and  extensive,  while  adults may  move  more  slowly  and  for  short
distances;  e.g.,  many  immature  Glaucous-winged  Gulls   appear  to   leave the
area,  while  locally-nesting adults  may  not.   Perhaps because of  the mild
winter in the study  area and adequate food supplies most individuals  of most
breeding  species  appear to  remain in the inland marine waters.   However, the
vast majority of  the  Rhinoceros Auklets leave the area  for the  winter,  as do
the Tufted Puffins.

     The  Puget Sound region  (and  the study  area in particular)  is  very
important  as a wintering  area and  stop-over area for many  birds migrating
along  the  Pacific Coast.  There  are  many species  that stop here,  with many
individuals  remaining for the  winter  while  others continue  south.   This is
the case with the Black Brant, with some  staying here in a few  locations all
winter while most of the  population  continues  south to winter  in California
and Mexico.

     There are  only a few  species (e.g.,  a number  of shorebirds) that appear
here only as migrants on their  twice-annual passages through the area.  These
species  are  generally  long-distance migrants,  some breeding  on  the  Arctic
slope and wintering  in  southern South America.

     There are  no species  which have populations wintering exclusively within
the study area. , However,  there may  be currently unrecognized  subpopulations
that  do  reside here exclusively during  the  winter.    There is  evidence of
individually marked  birds  (leg-  or  neck-banded  waterfowl) or  birds  of rare
species (presumably  the same individuals) wintering at  the same location over
several years.   It is also  probable  that individual long-lived marine birds
or populations  retrace  their migration  routes quite closely each year.

III. F. 3.  Marine^ Fish.   The research  conducted  in the study  area indicates
that fish migrations  can usually  be  reduced to  a  simple triangular  pattern:
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                          Adult Feeding  Ground
                                                     recruitment
                                                           B
           Spawning           Eggs,  larvae          Nursery
             area           (passive drift)       area-juveniles
     A -» B is with the water currents

     B-» C, and C -»• A are against the currents

     A-» C is with the currents
Some biologists  theorize  that  the most abundant fishes  (which are generally
the commercially important fishes) are nearly always migratory fishes because
of  the  evolutionary necessity  of separating  the  three  major life  history
stages (eggs/larvae, juveniles, adults) to provide maximum numbers.

     There are many kinds of migrations  and movements of marine  fish in the
study area which must  be taken into  account  when  considering the importance
of various habitats.  Three examples will be given to support this statement.

     Juvenile  pink and  chum salmon,  migrating  from freshwater  streams and
rivers to the ocean, spend much of the first six months  of  the year  (usually
the spring and summer)  along the beaches and shorelines feeding on epibenthic
organisms.  Although these  are "transient  species,"  they are  present every
year at approximately the same time.

     Pacific herring spawn  in  the same marine areas  year after year and on
similar dates.   Some of  these areas,  such  as  some of the ones classified as
cobble  and gravel  habitats of  low  productivity, obviously present  ideal
conditions for  both egg  and early larval  survival;  there  is little dispute
among the scientists studying the early life history of  fish  that  the key to
larval survival  is  an  abundant availability of the right kinds and densities
of food.

     Lingcod make annual spawning migrations from deep water  to the nearshore
waters of the rocky reef habitat.  This migration  occurs from about December
through May and  although the female  spends little time  in the shallow water
once her eggs are deposited, the male guards one or more  nests  and may spend
many  weeks  in the  upper subtidal rocky habitat.  Removal  or abandonment of
nests  by  male  lingcod,   for whatever  reason,  will  usually  result  in  the
destruction of these nests.

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III. G.  Natural  Stresses.  As described in the section on Biogeography, the
flora and  fauna  of the study area  are similar to that  of the larger  North
Eastern Pacific  province.   However, as one proceeds into the study area from
the mouth  of  the Strait of  Juan de  Fuca,  species richness decreases  among
benthic invertebrates.   There are a number of natural stresses in the study
area that may, in part, explain the decrease in species richness  in the study
area  compared to  the  open  coast.   These  natural  stresses also  affect  how
marine biological communities respond  to human-caused perturbations.  In some
cases they may cause biological changes that  exceed  in  magnitude those that
may be  caused by  pollutants or  other perturbations.  Species richness  for
fish and birds increases due  to increased protection and habitat  diversity.

     As one proceeds eastward through  the Strait of Juan de Fuca  and into the
San Juan  Islands,  the mean wave  energy decreases.   Those  species adapted to
more exposed  conditions, particularly  those  living  in the  intertidal  zone,
are not always  replaced by  species more adapted  to  quiet water; therefore,
species richness is decreased.

     Exposure  of  intertidal  habitats during  tidal cycles  has   a profound
effect  on  the  distribution of  organisms.   In  all  habitats   the  strata
submerged  only during  high tides are  virtually barren of organisms.  Species
richness,  total  abundance and  biomass usually  increase  in the  lower  tidal
strata.   Regional differences  in  the  extent of  stress from  tidal exposure
occur.  The time of lowest tide in spring  and summer near the Pacific Coast
is  in  the  early  morning,  while  in fall and winter  the lowest tides  are in
midday. More  easterly  in  the study area  (i.e.,  the San  Juan Islands),  the
timing  of  maximum exposure is reversed.   Spring  and summer lowest tides are
in midday  or  early afternoon,  and  winter  time  lowest tides are  during the
night.  This  means that the  intertidal area  in summer is  exposed to maximum
insolation and exposure stress and  in  winter  is exposed to  lowest temperature
and the greatest risk of  freezing.   The  effect of intense summer insolation
is evident in the "summer burn  off"  of algae.  In  rock and  cobble habitats
relatively  rich growths of  brown  and green algae  that can be found  in the
lower intertidal in March  and April are very much  reduced  in July and August.

     Although  estuaries  are  rich and productive areas in their own right, the
reduced salinity caused by  fiver  flow is a  stress  to  many organisms  and
species richness  can be relatively low.  Small localized  estuaries are found
throughout the study area  (i.e., Pysht River,  Elwha  River).  The Fraser River
discharges  the greatest amount of  freshwater  to  the study area.  Depressed
salinity in the  freshwater/seawater.mixing zone is  a stress to  many species
adapted to more saline  conditions.  Smaller scale  lower-salinity  stresses may
occur where groundwater  seepage,  springs,  small  creeks, and storm  drains
occur.  As  a  result of  reduced  salinity,  some species normally occurring in
the area may be  missing from communities located  near the source.  They may
or may not be  replaced  by  other species more  tolerant of low salinity.

     Uprooted  trees and cut  logs commonly occur in the  study area and can be
a stress  to intertidal biota.  Particularly  during storms,  logs scour the
intertidal areas  and  may  cause extensive  damage,  particularly,  to rock and
cobble  habitats.   This "natural" stress is even  more pronounced on the open
coast and has been documented by Dayton (1971).  Log scouring may  create new

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space  for  colonization by  removal  of existing biota.   It  also may increase
the  diversity  of habitat  types  by  modifying  the  substrate  type.   The
magnitude of effects varies with the amount of wave action.
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              IV.  BIOLOGICAL CHARACTERIZATION OF MAJOR HABITAT

                   TYPES OF NORTHERN PUGET SOUND AND THE

                   STRAIT OF JUAN DE FUCA
IV. A.  Intertidal/Subtidal

IV. A.  1.   Habitat definitions.   In  designing  a sampling program for marine
communities, with the exception of mammals and  to  some  extent  birds, it  is
not possible to sample the entire biota of a region.  An alternative approach
is  to  use a  habitat-by-habitat  sampling  design.   Therefore,  using  this
design, the range of habitats within the study area was first determined and
then  typical  areas representative of each  type were selected  for  sampling.
The bird  and mammal  censuses were conducted areawide and  the  habitat types
noted  for each  standard  subregion.   A  number  of  classifications  of  the
nearshore  habitat  of this  region have  been developed recently by  various
state and federal agencies.   In reviewing these and the data gathered to date
on  the biological communities  of  the region,  the range  of  habitats  was
divided  into  three  major  types  labeled  according  to  sediment  type  and
exposure to wave  action and  tidal  currents.  These are:

      (1)  exposed unconsolidated sediments  (coarse sand and gravel),

      (2)  protected unconsolidated sediments  (mud and mud mixtures), and

      (3)  rock (including  cobble).

Several  points  must  be  kept in mind with regard  to intertidal/subtidal
habitat designations.  First, both exposure  and  sediment types are physical
characters with  continuous gradients, not  a  series  of  discrete states.   The
communities  characteristic   of  each  habitat   type  are  also  present  in
continuous gradients, not  in discrete states  implied by  these treatments in a
classification scheme.   Another  important point to keep  in mind is that the
habitat found  in the intertidal zone at  a given site may not be the same as
that  in the subtidal zone.   Generally,  sampling  or direct observation  is
necessary to determine the subtidal habitat type.

IV. A. 1.  a.  Exposed unconsolidated sediments.  This habitat type  (Figure 5)
is defined  by its  exposure  to moderate-to-severe  wave and/or tidal current
action.   This  severity  of  exposure  precludes  the  accumulation  of  fine
sediments, so  the substrate ranges from sand  to gravel  to  small cobble.  The
sediments are  not stable.   They are  either in constant motion  or  in motion
during  severe wave or  current  conditions.   This  motion is  sufficient  to
preclude  the  development  of  a surface  community  of  attached macroscopic

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organisms.   This  absence  of live  organisms  and more  generally  even  the
absence  of  evidence of  organisms  such as  tubes,   casts,  or  shells  is  a
diagnostic surface feature.  The beach gradient or slope is steep; therefore,
the beach  is narrow.  The backshore is  usually  limited  in development.   The
beach geomorphology  is erosional,  often associated with  feeder bluffs  and
longshore sediment movements.

     Within this general habitat type two subcategories are recognized,  based
largely  on  sediment type.  The  first  is  defined  by exposed  mixed  coarse
sediment,  primarily  gravel and  small  cobble with  little or  no sand.   The
sediment  is  in  constant motion  but the large  between-grain pore  size  may
provide  refuge space for  some  small organisms,  including meiofauna.   This
sediment motion also functions as a grinding mill, reducing the particle size
of  trapped   detritus.   The  other  subcategory  of  exposed  unconsolidated
sediments  is  exposed  sand, primarily  medium to coarse.   This  sediment is
somewhat more stable than that described above and the slope less steep.   The
pore or  interstitial space is  much more restricted, and it usually occurs in
areas slightly less  exposed than those with mixed coarse.

IV.  A.    1.   b.     Protected   unconsolidated   sediments.    The  overriding
characteristic of this habitat type  (Figure 5) is the  protection from strong
wave and/or  tidal  current  action.   This  is the  habitat of the  bays  and
harbors of this region.  Protection from waves allows for the accumulation of
fine sediment, mud,  and  silt,  often mixed with some sand  and gravel.   The
beach surface and  sediments are stable.  The diagnostic surface feature of
this habitat type is  the presence of abundant  live organisms, their holes,
casts,  and tubes.

     The  beach  gradient is  low  and  the  width is  relatively  great.   The
backshore  is  often  very  well-developed  and occasionally   associated  with
marshes.   The geomorphology of  these beaches  is accretional; the sources of
fine sediment are rivers, streams, or erosional bluffs.

     Within   this  major  habitat  category  the   subcategories  of  protected
gravel/mud,  sand/mud,  and mud  may be  recognized by  their  dominant sediment
type,  reflecting  the  influence  of  increasing percent  mud.   Pore   size
decreases,   retention  of   organic   debris   increases,   and   the  degree  of
protection increases as grain size decrea'ses  from gravel/mud  to mud.

IV.  A.   1.  c.  Rock.   The  exception  to  continuous  gradients  of  sediment
substrata  discussed  above is the discrete substrate of rock.  The diagnostic
feature  of this  habitat type (Figure 6) is  the  presence of  the solid  rock
surface.   This surface provides  a  stable  substrate for organisms which can
attach to  it (epifauna and epiflora) regardless  of  the  severity of exposure
to  tidal current and  wave action.  Therefore,  exposure  in  the habitat  type
covers the range  from  protected  to extremely exposed.   The  beach  slope of
rock  habitats varies   from  medium  to  steep,  although   some  areas  are
characterized by a fairly broad wave-cut terrace.

     Three subcategories of this major habitat are recognized.  The first two
are characterized by the presence of solid rock  and  represent  the extremes of
the  wave  exposure   gradient:   protected rock and  exposed rock.   The  third

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       a. Rock habitat

       b.  Cobble habitat
Figure 6.  Examples of intertidal  rock  and  cobble habitat categories.




                                      28

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          Exposed unconsolidated habitat
       b.  Protected unconsolidated habitat
Figure 5.  Examples of exposed and protected unconsolidatad intertidal/subtidal
           habitat categories.
                                     :

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subcategory is more complex:   the  cobble habitat (Figure 6).  This habitat is
characteristic of erosional beaches where  the  eroded  material  contains large
cobbles, resistant to movement by  wave or  tidal action, that cover a wave-cut
terrace and allow the accumulation of finer  sediments  under  the  rocks.  This
subcategory   is   a  hybrid  between  the  rock  habitat  and  the  protected
unconsolidated habitat  in that it  supports both an  infaunal  and  an epifaunal
biotic  component.   Because  of the  heterogeneous  character  of  the  cobble
habitat, it is considered by many  to be  a  unique  and  distinguishable habitat
category.  However,  in this report it will  be considered as a subcategory of
"rock," reflecting the  strong  influence of the epibiota in the composition of
the  community associated  with  it.

IV.  A. 2.  Spatial extent.  Rough  estimates  of the  distribution  of the three
major habitat types  are  shown in  Figure 7.   These  estimates were based upon
shoreline  type designations provided in  the  Washington Coastal Zone Atlases.

     Exposed  unconsolidated habitats occupy  about 50% of the shoreline.  This
habitat  type  is  common along the eastern  portion of  the  Strait;  the  west
coast of Whidbey  Island; around  parts of Lopez, Guemes, and  Lummi Islands;
and  along  parts of the  shore extending between Sandy Point and Boundary Bay.

     Rock  (and  cobble)  occupy about 40%  of  the  shoreline.   Major rock areas
occur along the western portion  of the Strait and around many parts of Orcas,
San  Juan,  Shaw, and Stuart Islands.

     The   remaining   shoreline   (about    10%)  is   occupied  by   protected
unconsolidated sediments.  This  habitat  type is restricted to embayments such
as Discovery, Dungeness,  Padilla, Samish,  Birch Bays,  and Drayton Harbor.
Very little protected unconsolidated habitat occurs  along  the Strait  and in
the  San Juan  Islands.

IV.  A.  3.  Major  biological  assemblages.  Study sites at  which intertidal/
subtidal data were collected  are  listed  in Table  1  along with  the habitat
type  that  each site   represented.   The  locations  of  these  sites and  the
geographic extent of the  data  base are shown in Appendix Figures I-A through
I-D.   The  following discussions  were derived from syntheses of data collected
at these sites.  Individual data sets were archived in technical reports  and
on magnetic   tapes  (Appendix  Table I-A).  The  tape formats are  listed in
Appendix Table I-B.

IV. A. 3. a.  Dominant  and characteristic  species of  intertidal/shallow
              subtidal  benthic habitats.

IV. A. 3. a.  (1)  Rock/cobble  habitat.

     Marine mammals;  Harbor seals were the  most  important  marine mammals to
use  this  habitat type,  followed  by the  sea lions  (northern and California)
(Appendix  Table  II-A).   This  habitat was  very  important   at  low  tide  for
haul out, resting, breeding, and pupping for harbor seals.  All the important
rock haul-out sites were located on  islands  (Table 2),  thereby affording
these animals some protection  and  isolation  from human disturbance.  The rock
habitat  was used by 68% of the local harbor  seal population during the period

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                                                                                           Boundory Bay
49°-
              Exposed unconsolidated  sediments: mixed  coarse,
                                          sand
              Protected unconsolidated sediments: mud-gravel,
                                           mud-sand, mud
        """""m Rock: exposed rock, protected  rock, cobble
  Figure 7.
Estimated spatial extent of major  intertidal/subtidal  habitat  types  in  the  study  area.

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          Table  1.   Intertidal/subtidal,  nearshore and offshore study sites per habitat type.
                                                   Benthos
                               Fish
Birds*  Marine Mammals
         Habitat/Site
                      Intertidal/
Intertidal  Subtidal   Subtidal    Nearshore
CO
ro
A. Intertidal/subtidal
1. Exposed unconsolidated
a. Mixed coarse
Legoe Bay
Guemes Island South
Ebey's Landing
Twin Rivers
Dungeness Spit
South Beach
Deadman Bay
b. Sand
Eagle Cove
West Beach
North Beach
Kydaka Beach
Alexander's Beach
2. Protected unconsolidated
a. Mud-gravel
Webb Camp
Beckett Point
b . Mud-sand
Birch Bay
Jamestown/Port Williams
c. Mud
Westcott Bay
Drayton Harbor
Padilla Bay
Fidalgo Bay


X
X
X
X
X
X
X

X
X
X
X



X
X

X
X

X
X
X
X




X
X
X
X
X

X
X

X



X
X

X
X

X


X


X
X

X
X
X
X

X
X
X
X
X



X

X
X

X
X
X
X


A

X
A
X
X
A

A
s
A
A



B
X

S
X

B
S
X
S





A
A



A


A




A

A
A


A
A
A
         Continued

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          Table 1.  (Contd.)
co
CO
Benthos Fish Birds* Marine Mammals

Habitat/Site
3. Rock/cobble
a. Exposed rock
Neah Bay
Slip Point
Pillar Point
Tongue Point
Observatory Point
b. Protected rock
Migley Point
Fidalgo Head
Cantilever Pier
Barnes Island
Point George
Allan Island
c. Cobble
Cherry Point
Shannon Point
Partridge Point
North Beach
Morse Creek
B. Nearshore (Neritic)
1. Exposed
Kydaka Beach
Twin Rivers
Pillar Point
Morse Creek
Dungeness Spit
Intertidal/
Intertidal Subtidal Subtidal


X
X
X X
XX X
X

X
X X
X
X
X X
X

XXX
X
X X
XXX
XXX








Nearshore


X
A
A
A
A

A
X

X

B

X
X
X
A
X


X A
X A
X A
X A
X X




A
A
A
A
A

A
A

A

A

A

A

A


A
A
A
A
A
          Continued

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          Table 1.  (Contd.)
CO




Habitat/Site
B.




















C.




1. Exposed (Contd.)
Jamestown/Port Williams
Beckett Point
West Beach
Alexander's Beach
South Beach
Deadman Bay
Eagle Cove
Burrows Island
2. Protected
Birch Bay
Cherry Point
Lummi Bay
Migley Point
Legoe Bay
Guemes Island East
Padilla Bay
Guemes Island South
Shannon Point
Point George
	 Westcott Bay 	
Offshore
1 . Bays
2. Broad Passages
3. Narrow Passages
4. Open Waters
Benthos Fish
Intertidal/
Intertidal Subtidal Subtidal Nearshore

X
X
X
X
X
X
X
X

X
X
X
X
X
X
X
X
X
X
X





Birds*



X
X
X

X
A
A
B

S
X
S
A
A
B
X

X

B

X
X
X
X
Marine Mammals



A
A
A




A


A

A
A

A
A
A



A

A
A
          *X indicates sites where multiple bird censusing methods were used; A indicates aerial censuses only;
           B indicates boat surveys only;  S indicates shore censuses only.

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Table 2.  Major haul-out areas of pinnipeds in the study area
     Site
General Location
  Habitat  Type
Harbor seals
Sentinel Island
Ripple Island
Cactus Island
White Rock
Skipjack Island
Bare Island
Sucia Island
Matia Island
Puffin Island
Peapod Rock
Bird Rock
Buck Island
Barnes Island
' Dinner Island
Smith-Minor Islands
Protection Island
Dungeness Spit
Dungeness Bay

San Juan Islands
San Juan Islands
San Juan Islands
San Juan Islands
San Juan Islands
San Juan Islands
San Juan Islands
San Juan Islands
San Juan Islands
San Juan Islands
San Juan Islands
San Juan Islands
San Juan Islands
San Juan Islands
Eastern Strait
Eastern Strait
Eastern Strait
Eastern Strait

Rock
Rock
Rock
Rock
Rock
Rock
Rock
Rock
Rock
Rock
Rock
Rock
Rock
Rock
Cobble,
Cobble,
Exposed















gravel
gravel
unconsolidated
Protected unconsolidated
  Race Rocks
  Chain Islets
  Becher Bay
  Padilla Bay
  Samish Bay
  Bellingham Bay

Sea Lions

  Race Rocks
  Sombrio Point
  Port Gardner*
  Tatoosh Island
Eastern Strait
Eastern Strait
Eastern Strait
North  Sound
North  Sound
North  Sound
Eastern  Strait
Eastern  Strait
Eastern  Strait
Western  Strait
Rock
Rock
Rock
Protected unconsolidated
Protected unconsolidated
Protected unconsolidated
Rock
Rock
Protected unconsolidated
Rock
 *0utside main  study area,  sea  lions haul out on grounded barge.
                                    35

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of peak abundance (August) and by all sea lions.  Race Rocks and Sucia Island
were highly  important  rock sites for harbor seals.   Race  Rocks  was also the
most important rock site for sea lions.  River otters are known  to  forage in
rocky intertidal/shallow subtidal areas.

     Birds;  The most  common groups of  birds  observed at  rock/cobble  sites
were  gulls,  shorebirds, and  ducks  (Appendix Table  II-B).  Many  species are
migrants or winter visitors.  Glaucous-winged Gulls were observed in  100% of
the  surveys  (Appendix  Tables   III-A-C).   Surf  scoters  were  very  common,
especially in the winter, occurring  in up to 100% of  the surveys.   The  other
common  species  were  Bonaparte's   Gull,  Harlequin  Duck,  Bufflehead,  and
White-winged Scoter (Appendix Table  II-B).

     While a number of birds (e.g., cormorants and gulls)  are known to  roost
on rocks above normal  tidal levels, very few species  forage  directly in the
solid   rock   intertidal  and  shallow   subtidal  habitats   themselves.    The
ubiquitous Glaucous-winged Gull  accounts for  much  of  roosting usage,  and
Great  Blue Herons, Harlequin  Ducks, and  scavenging Bald  Eagles along with
small numbers  of a few  rock-foraging shorebird species represent almost all
the foraging usage.

     In general,  the  density  of birds  in rock/cobble habitats was  usually
much  lower than in other habitats.   Density  and  biomass  varied greatly in
locations  where seasonal  herring  spawning attracted  large numbers of  some
birds,  particularly Surf  Scoters  and  other  diving  ducks.'   Relatively few
wading  birds appear to use this  habitat.   This  apparently is  one of  few
habitats supporting nonbreeding  populations of  diving birds in summer.

     Fish:   About  18  species  of  fish were  found  in this  habitat  type,
including  sea  perch,   sculpin,  and  juvenile  forms  of   various  rockfish,
flatfish, and cod.  Some species were commonly  found only in the tidepools of
the  rock/cobble habitat  (high  cockscomb, calico  sculpin,  mosshead sculpin,
northern clingfish,  and black  prickleback)  (Appendix  Table  II-C).   Another
species  (the tidepool  sculpin)  was found commonly both in tidepools  and at
other habitats.  Where Nereocystis  luetkeana kelp  beds were present in the
shallow  subtidal area,  a  group of fishes  (including sea perch,  rockfish,
greenling, lingcod,  sculpins,  and gobies) was  commonly  found that  was not
found at other habitats.

     Intertidal benthos;  The dominant  benthic  species  found  at  the rock and
cobble habitats are listed  in Appendix  Table II-D.   Some 83 taxa of  algae and
macroinvertebrates  were dominant  at the rock  habitat, while about  81 were
dominant at  the cobble habitat.   The  primary producers  include macro- and
microalgae.  The dominant  macroalgae were distributed primarily  in the mid-
to low-tide  zones  (and were usually more extensive in the shallow subtidal
area).  They included species of 53  Alaria, Fucus,  Microcladia. and Gigartina
in the  intertidal  elevations and species of Desmarestia, Plocamium. Pterygo-
phora,  and  Costaria in subtidal  zones.  Macroalgae were  characterized by
relatively large standing  stock  biomass and  were  not extensively  used by
herbivores.  Microalgae (mostly benthic diatoms) were common in the mid- to
high-tide areas.
                                     36

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     When  dominant,  macroalgae   were  an  important  factor  in  community
structure  and  relative  abundance  of  other  species  at  the  rock/cobble
habitats.  Macroalgae can  provide a three-dimensional component to the basic
two-dimensional  rocky  surfaces.   Similar  to  the  trees  of  a  forest,  some
macroalgae,  such as  Laminaria,  Egregia,  and Alaria,  may be  considered  as
canopy species.  The "shading" created by the  canopy  species  dissipates some
of  the energy  of waves  and  thus provides  some  relief  from  exposure  and
encourages the  growth of  red algae species  that  find lower  light intensity
conditions optimal for  growth.   Where algae species such as Alaria, Iridaea,
and  Polysiphonia  were  important,   tube   building  amphipods,   such  as
Ampithoe sp. were  also  found.   Algae such  as Corallina  Vancouveriensis  or
Endocladia muricata can support large numbers  of  small  mussels, small worms,
and other wormlike species.

     If  barnacles  predominate,   species  inhabiting  crevices,   such  as
Typosyllis  adamantea and   the  nemertean  Emplectonema gracile  may  be more
abundant.  Amphipod species, such as Hyale sp., which can nestle in crevices,
are  also more  abundant.    Thus,  dominance  has  a  functional  as  well as a
descriptive aspect in these habitats.

     The  three-dimensional  effect  of  macroalgae in  the  rock/cobble habitat
was found  to be most well-developed  at  sites in  the  western  areas  of  the
Strait.  At cobble sites, the extent of the  three-dimensional effect of algae
was  also  related to  cobble size;  cobbles  must  be  large  enough  to  remain
stationary.

     A  group of  herbivorous urchins  (Strongylocentrotus  franciscanus and
S_. droebachiensis), snails  (Littorina sitkana, I,,  scutulata, and  Collisella
pelta), and  chitons  (Katharina tunicata  and  Cyanoplax  dentiens) were  common
intertidal animals but  were not  found as dominant  species  in subtidal  areas.
Although some herbivores (i.e., chitons)  may eat macroalgae, most apparently
rely  upon the  microalgae  and sporlings  of macroalgae as  food.  Herbivores
were  distributed  throughout the  intertidal  zone  and were  the  most  commonly
encountered large animals in the  mid-  to  high-tide  zones.

     Predators   common   to   the   rock/cobble  habitats   include  anemones,
flat-worms,  polychaetes, nemerteans,   snails,  and  seastars.   Four predators
that were not frequently sampled  (because of  patchiness and mobility) have  an
important  impact on community  structure of  the rock/cobble habitat.  These
are   the  snails  (e.g.,  Fusitriton   oregonensis,  Nucella lamellosa,  and
N. emarginata)  and  the  seastars  (e.g.,  Pisaster  ochraceus, Dermasterias
imbricata,  Solaster stimpsoni,   and  Leptasterias  hexactis.)   Under  optimal
conditions,  these snails can remove all of  the juvenile barnacles  and mussels
that  attach  as  larvae in any given year.   The seastars may also dramatically
affect  community structure  by preying  upon  barnacles, mussels,  and snails.

      Suspension feeders  include barnacles, mussels,  bivalves,  and spirorbid
polychaetes.   Where  large  mussels were common  (primarily in  the western
Strait),  a  three-dimensional effect  (similar  to  that of  the macroalgae) was
found.   Where  fine sediments were  trapped  in mussel  beds,  suspension feeders
(bivalves)  and  deposit/suspension feeders  (polychaetes,   crustaceans) were
found.
                                       37

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     At cobble  sites,  the spaces between the cobbles and the finer sediments
that  collect  between and  below the cobbles provided habitat  for  suspension
and  deposit feeders.   In general, more  species  of suspension and  detritus
feeders were found at cobble  sites  compared with rock sites, possibly because
of the greater  habitat  diversity.

      Subtidal benthos:   At most  sites  where  rock or cobble were  sampled in
the  intertidal  zone, some  different substrate was found in the subtidal area.
Thus,  the  data  base for subtidal benthos associated with rock and cobble is
relatively  weak.   About  92 taxa were  dominant  in subtidal rock  and  cobble
habitats (Appendix Table  II-D).   The shallow subtidal area of the rock/cobble
habitat, in general, has  similar functional characteristics to the intertidal
area.  However, the species are different and there are often more  of them.
Intertidal  algae,  such  as Fucus,  Enteromorpha,  and  Porphyra,   were  often
replaced  in  the  shallow  subtidal  zone  by  Laminaria,  Nereocystis.  and
Costaria.   Red  algae were  more  common,  often dominant, in subtidal areas than
in intertidal areas.  At  exposed sites  the eelgrass Phyllospadix scouleri was
a dominant  plant in the  shallow subtidal.   At  some  cobble  sites,  patches of
the  eelgrass  Zostera marina  species were  common.  However,  this  species was
much more common  in  the protected unconsolidated habitats.

      Herbivores at  shallow  subtidal  areas were  not  as  common  as  in  the
intertidal  zone.   On the  other  hand,  suspension  and deposit feeders (mostly
bivalves and polychaetes)  were  more common at subtidal areas than intertidal.

IV.  A. 3. a.  (2)  Exposed  unconsolidated habitat.

     Marine mammals:    A  number  of  small  isolated  areas,  specifically
Smith-Minor Islands,  Protection Island, and Dungeness Spit, were  found to be
very important  haul-out and pupping areas for harbor seals  (Table 2, Appendix
Table  II-A).   The largest  single counts of harbor  seals were made  at these
sites.   Protection  Island and  Minor  Island account  for  nearly   20%  of the
observed harbor seal population during  the period  of peak abundance  (August).

     Bird_s;  The  groups of birds using this habitat type included the gulls,
terns, ducks,  alcids,  and shorebirds  (Appendix  Table  II-B).   Surf Scoters,
White-winged Scoters,  and Glaucous-winged Gulls were the most widespread and
abundant species, followed by the Bufflehead, Mew Gull,  and  Bonaparte's Gull.
Densities were  higher in  mixed  coarse  subtidal sites than  in unconsolidated
sand locations, and greatest  seasonal use occurred in winter (Appendix Tables
III-D and  III-E).  Censuses  over these habitats  also recorded high seasonal
densities  of  several  gulls.   However,  gulls  often  used  locations  like
Dungeness Spit  and West Beach as daytime  roosts adjacent  to  offshore foraging
areas; thus,  these  figures may  not  reflect biological  productivity  of the
intertidal/subtidal  habitats  themselves.   There  was  relatively   low  use of
these habitats by shoreline foragers like shorebirds, probably reflecting low
densities of prey species.

     Fish:   This habitat appears to support  fewer  fish  species than  any other
habitat.    About  36  dominant   species were  found,   including   sea  perch,
sculpins,  flounders,  gunnels,  greenlings,  and  juveniles  of  the Pacific
tomcod, cabezon, and English  sole  (Appendix  Table  II-C).  Although there were


                                       38

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relatively  few  demersal  species  found  in  the  shallow  subtidal  and  the
intertidal  zones,  the  habitat  appears  to  be  important  to  some  neritic
species.  Gravel  and  sand beaches in the shallow subtidal  zone are known to
be used by some species  for spawning (i.e.,  Pacific herring).

     Few species occurred  at exposed sand beaches and exposed gravel beaches;
the least occurred at sandy sites.  Where an  exposed  unconsolidated  site was
adjacent  to  another  habitat  type,  the  species  composition of  fish  was
affected.   For example,  the  Twin Rivers site  was  gravel  and  sand in  the
shallow subtidal,  but cobble and rock substrates border the beach seine site
and the fish species were  characteristic of these other habitats.

     Sites with intertidal exposed unconsolidated habitat often had different
sediments  in  the  shallow  subtidal  area.   Most  of  the  shallow  subtidal
substrate  at  exposed unconsolidated sites  had large  cobbles  with attached
epiflora and  fauna (i.e., Ebey's Landing,  Guemes Island South,  Legoe  Bay).
Many more  fish species were often found  at such sites.  Many species of sea
perch,  gunnels,  sculpins, poachers,  and flatfish  were  dominant (including
juveniles  of  Pacific tomcod, walleye pollock,  copper rockfish, cabezon, and
English sole).   It is of interest to note that  the  fish fauna found at-these
exposed  mixed  coarse  sites was  very  similar  to  the fish  fauna of  the
protected unconsolidated habitat.

     Intertidal  benthos;  Compared  to  other habitats,  the intertidal flora
and fauna  at the exposed  unconsolidated  habitat was  impoverished.   Only 21
taxa were  dominant at  this  habitat  (Appendix Table  II-D).  Except for diatom
films  (not measured)  and occasional bands  of  the green  algae   (Monostroma
or Ulva)  that may  be  found on  patches of  cobble  in the low intertidal, no
attached  plants were  dominant  at  this  habitat.  Only  two herbivores—the
amphipod  Anisogamtnarus  pugettensis  and  the  snail  Lacuna  variegata—were
dominants.    Most  remaining  species   were   deposit   feeders—polychaetes,
amphipods,  isopods,  nematodes,  oligochaetes,  and  bivalves.   These species
probably  feed on detritus imported  from other  habitats.   Compared to other
habitats,  polychaetes were poorly  represented due to  sediment  instability and
the relative lack of  fine material  in the  sediment.   Nemerteans were often
the top  carnivore found in this  community.

     There is generally a higher  spatial  variability  in  dominant forms at
this  habitat  than  in  the others.   Conditions  of  desiccation and  substrate
instability  are  often  extreme.    Colonization  is   usually   difficult  and
patchiness  of distribution is  correspondingly large.

     Although the general benthic biomass  of  this habitat  was  low, notable
exceptions  have been   observed.   Amphipods of  the   genus  Paraphoxus  and
Paramoera  were seasonally very numerous.   For example,  up  to  40,000 Paramoera
mohri  per  square  meter  were   consistently  found in  the summer  at  Ebey's
Landing.

     Subtidal  benthos:   Only   three  sites  with   exposed   unconsolidated
sediments  in the shallow subtidal  area were sampled:   Dungeness Spit,  Twin
Rivers,  and West Beach (Appendix  Table II-D).   The substrate in  the subtidal
zone of  the study area was  more often cobble with high substrate  stability.


                                      19

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Fine sediments often occurred between and under the cobbles.  Ebey's  Landing
and Legoe Bay exemplified this habitat type and are discussed  above.

     At  the  sites  with  exposed  unconsolidated   substrate  in  the  shallow
subtidal area,  the  benthos  often illustrate a pattern similar to that of the
intertidal zone.  That is, relatively few species  were found as  dominants.   A
total  of only  14  species were  dominant at Dungeness  Spit  and West  Beach.
None were primary producers.  Deposit and suspension feeders were often  less
common  than  at other  habitats,  although  there   were  more  species  in  the
subtidal areas  than in the intertidal  areas  (probably  related  to  increased
protection  and  finer  sediments   in  the  subtidal substratum).   The  small
bivalves Mysella tumida and Psephidia lordi were common as were sand dollars,
Dendraster  excentricus.   More deposit feeding polychaetes were  found  in the
subtidal compared  to the intertidal  zones.   However,  polychaetes were  more
numerous  in  the  protected  unconsolidated  and   rock/cobble  habitats.    It
appears  that  substrate  instability  may  prevent  the  occurrence   of  tube
building polychaetes in the exposed unconsolidated habitat.

IV. A. 3. a.  (3)  Protected unconsolidated habitat.

     Marine  mamma 1 s:  Mud  and  sandflats  are  used for  haul-out  by  harbor
seals, and apparently no other species  (Appendix Table II-A).   Sites observed
to be important for haul-out included Padilla Bay, Samish Bay, Dungeness  Bay,
and Jamestown (Table 2).  Some of  these  areas, for example Padilla  Bay,  were
used  for haul-out only at low tide when the mudflats were exposed.   Drainage
channels are  often  used for escape from disturbance.   Though sea lions  were
observed in a muddy area of Port Gardner, they were hauled out on a  barge.

     Birds:   Gulls,  terns, ducks,  geese, sandpipers, and grebes were found to
be the  dominant groups of birds  in  this habitat   type  (Appendix Table II-B).
This habitat  supported some of the highest seasonal densities and biomass  of
marine birds  within  the study area (Appendix Tables III-F-H).   In addition to
high  numbers  of  the widely  occurring diving   ducks,   eelgrass-associated
species  like Black Brant  and wigeon  formed very  large components  of the
populations  in  winter  and  during migrations.  Gulls  also foraged  in large
numbers in these areas at low tidal stages.

     The tables in Appendix III,  representing the  10 most-frequently observed
species in each season, do not reflect  the great relative  importance of these
habitats to shorebird populations  or  the fact  that seasonal species richness
in these habitats was greater than other subtidal/intertidal habitat types.

     Most usage of these habitats was by winter resident and migrant species.
Breeding species  generally  do not nest  adjacent to these  habitats (except at
Padilla Bay,  Jamestown,  and Drayton  Harbor);  i.e., nest sites  are  generally
not  available,  so  summer  usage  is   relatively low.   However,   resident
Glaucous-winged Gulls  often  forage  in  large  numbers on  exposed  intertidal
flats during  the summer.
     •
     These  protected   unconsolidated   habitats   are  also  heavily  used,
particularly  in summer,  by Great  Blue Herons.  Several nesting  colonies were
located  adjacent  to protected  embayments in  the study  area.   The  data  in


                                      40

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Appendix III represent averages from  censuses  taken  at" all tidal stages and,
since herons were not present  at  all during  high  tides, densities  of this
species were understated for areas near  nesting colonies.   For  example,  at
Padilla Bay or  Samish Bay 300± birds were observed  foraging  at  low tides in
summer.

     Fish;   Twenty-eight species  were dominant  at  sites  representing this
habitattype:    sculpins,  the  tube-snout,  various  sea  perch  and juvenile
Pacific tomcod, English  sole, and  starry founders (Appendix Table II-C).  The
common  fish fauna  at this habitat was  similar  to  that of  sites  where the
shallow  subtidal sediment  was  exposed mixed  coarse.   Beckett Point samples
often had  the  most species, greatest  density,  and greatest biomass of  any of
the  sites  that  were studied.

     Intertidal  benthos;    The   intertidal   benthos   of   the  protected
unconsolidated    habitat   was   generally  more    species-rich    than  the
unconsolidated  exposed  habitat, and  less species rich than  the rock/cobble
habitat.   Some  75  dominant  taxa of  benthos were found  at  this habitat
 (Appendix  Table II-D).

     Most  primary  production was  from  eelgrass meadows  of  Zostera marina,
 although  eelgrass meadows had their maximum abundance  in the shallow subtidal
 depths.   Eelgrass  in the intertidal  zone  was  restricted to  the  +3 foot tide
 height  or lower.   Where eelgrass meadows  were  found, a  three-dimensional
 structure was  added  to the  community  and  epifaunal   species  (particularly
 amphipods) were  commonly found.   Eelgrass  appeared to  be  a very important
 habitat for epibenthic zooplankton.

      Benthic  herbivores were  not  common  in the  intertidal  zone  at  this
 habitat.   Platynereis bicanaliculata  (a polychaete)  was found in the infauna.
 Other herbivores  (i.e., Littorina  spp.  and  Lacuna sp.)  were found  only  at
 those sites having a cobble-like  substrate at higher  tidal  elevations or  on
 eelgrass.

      Polychaetes were  very well-represented  at  the protected unconsolidated
 habitat.  Some  30 dominant  taxa were  found in  the intertidal  areas.  Most were
 deposit  feeders, with  some  predators and a  few  suspension feeders.  Bivalve
 molluscs  were  also  well-represented at  this  habitat._   Some  11  dominant
 species  (primarily suspension  feeders) were common  at  this habitat.

      In  protected  habitats,  predominant  species can  be divided  into those
 which  are numerically  abundant,  but  which,  because  of their  small size, have
 low biomass;  and  those  which  are not  particularly  numerous,   but whxch
 contribute  a  major  portion  of   the standing  crop.    The  former category
 includes  such  groups as oligochaetes, small polychaetes,  and amphipods; while
 large  bivalves  such as Ma coma   nasuta,   Clinocardium  nuttallii,  Protothaca
 staminea. and Mya arenaria, and the mud  shrimp,  Upogebia pugettensis fall
 into  the latter category.  A  few species were  found  to be  important  in both
 senses in some locations.   These  included the polychaetes Abarenicola  sp. and
 Owenia fusiformis.  The relative  functional importance of species  having high
 density   but  low  collective  biomass versus  species   having high  collective
                                        41

-------
biomass but  low density is not  clear,  especially since  information  on rates
of reproduction is lacking.

     The upper tidal elevations  of the protected unconsolidated habitat had a
variable  flora  and  fauna that were  related  to  site  specific  substrate
variations.   Some  sites (i.e., Birch Bay, Padilla Bay)  had sandy or gravelly
sediment in  the upper intertidal zone and were found to have almost  no flora
or  fauna.    Other  sites  (Fidalgo  Bay,  Drayton  Harbor)  had cobble  or rocky
surfaces at  higher intertidal elevations  and had typical  rock/cobble flora
and  fauna.   At these sites, dominant epiflora and  epifauna species  included
algae  (Enteromorpha and Fucus),  herbivorous  snails  (Littorina)  and barnacles
(Balanus glandula).   At yet other sites  (e.g.,  Westcott Bay)  with protected
unconsolidated habitat, marsh  vegetation  (not measured) was  found  beyond the
upper  intertidal elevations.   At this  site,  bivalves  (Mya  arenaria, Macoma
balthica),  polychaetes  (Abarenicola sp.),  amphipods   (Corophium  spp.,  and
tanaeids  (Leptochelia  dubia)  were  all  commonly  found  at  the +5  feet and
+6 feet  tidal elevations.   Species  richness  and total  abundance  at  these
tidal  elevations were greater at the high intertidal  than  at  any other site
in any habitat.  At Westcott Bay, marsh vegetation continued from the +7 feet
to  +9 feet  tide heights  and  beyond.   Oligochaetes, nematodes,  and dipteran
larvae were  found  in  this  vegetation.

      Subtidal benthos:  Most taxa found in subtidal benthos were burrowing or
tube-dwelling organisms.   Few  attached biota were found.  Fewer dominant taxa
of benthos  (48) were found at the  subtidal protected  unconsolidated habitat
compared to  the intertidal (75  species).  This trend  is  a reverse  of  that
observed at  most exposed  unconsolidated  and  cobble habitats.   Brown and red
algae  were occasionally found at this habitat,  although  the bulk  of primary
productivity occurred within eelgrass meadows.

     Polychaete species were well-represented in  the  subtidal area  of  this
habitat  (24  dominant species)  as well  as in  the intertidal  zone (30 dominant
species).  Although most  species in the  subtidal area were deposit feeders
(as   in  the  intertidal   zone), species  composition  differed between the
subtidal  and  intertidal  zones.   Bivalve  molluscs  (suspension-feeders and
carnivores)  were common along  with gammarid  amphipods.  Crabs seeking shelter
among  algal  fronds  and  other debris  were  common.

IV. A. 3. b.   Trophic organization.

IV. A. 3. b.  (1)   General  background.

     Trophic or food web  structure  of  the biotic communities   characterizing
each broad habitat type have  been  described previously in  Simenstad  et al.
(1979), where the relative importance  of linkages between  nodes (elements of
the various  trophic levels) were subjectively  weighted by the occurrence of
food  items in the diet of the consumer.   At  that  time  no attempt was made to
weight the relative  importance of the producer  or consumer in   the community.
A thorough evaluation  of  the  organization and  flow of  organic  matter  through
a  food  web,  however,   must  consider   the  proportional  production  and
utilization  of organic carbon by the  various  components  of  the community.
The availability of production and consumption rate information for  organisms
                                      42

-------
in this region is unfortunately  too  sparse  and inconsistent to permit such a
food web synthesis.  As an alternative, though less than optimal, approach we
have utilized the standing stock (the quantity of living material present per
unit area at a selected point in time) of organisms in representative feeding
categories to illustrate their relative role in the community.

     While  comparisons within  trophic levels  are feasible,  standing  stock
estimates in different trophic levels should not be considered comparable nor
used  to  imply  energy  flow due  to  the  usually dramatic  differences  in
production  rates.   That  is, orders  of magnitude  differences  exist  in the
generation  times  of  phytoplankton  versus herbivorous  zooplankton  versus
zooplanktivorous fishes  and  birds.  These differences are  best illustrated by
the  production/biomass  (P/B)  ratio  which  has been  shown by Petipa  et al.
(1970)  to range in  the  Black Sea from 63 for primary  producers,  to 65 for
herbivores,  to 47  for primary  carnivores,  to 6  for  secondary  and  tertiary
carnivores  in  one epibenthic community.  The  implication from  these data is
the  plants,  because of  their  high turnover rate,  produce much more organic
matter  than members of the higher  trophic  levels.

      Even the  standing stock data are incomplete in this  region,  especially
for  the lower  trophic levels.    Standing stock data for  primary  producers  are
the  most limited.  Macroalgae,  sea  grass,  and saltmarsh  plant  standing  crop
values  were obtained  from averaging  data from the WDOE and MESA  intertidal/
subtidal data sets  over  a  year's sampling  period.   Although detritus was  a
food source of  obvious  importance,  estimates of the  proportional  sources,
rate of accumulation and standing stock of detrital carbon are nonexistent.

      All other data on the  standing  stock  of  macroalgae,  grazing  herbivores,
carnivores and other  predators, omnivores and parasites  originated  directly
 from  the  WDOE  and  MESA  intertidal/subtidal  data   sets,  both  published
 (Nyblade, 1977,  1978,  1979a/b;  Smith and Webber,  1978; Webber, 1980;  Smith,
 1979;  Everitt  et  al. ,  1979/1980;   Manuwal  et   al.,   1979;  Miller  et  al. ,
 1978/1980; Simenstad et al., 1977/1979/1980; Cross et al.,  1978),  and through
 further  synthesis  of  these  existing data.  The  taxonomic groups  and species
 considered important below  in the trophic organization  of intertidal/subtidal
 habitats may  not always agree  with those considered important above  in the
 community  organization.   The  prey  found  in  stomach   content  analyses  were
 often  dissimilar to  the  organisms  found  in benthos samples taken at the same
 sites.

 IV. A.  3. b.  (2)  Rock-cobble habitats.

      These habitats were characterized  by high  complexity and diversity  in
 food web structures compared to other habitat types,   including the offshore
 and  nearshore neritic habitats.  Detritus  was found  to be  the  most prominent
 source of  organic carbon,   based simply upon  the number of food web linkages
 (Figure  8).   Quantitative  comparison of  the  standing  stock of  the four
 sources   of  organic  detritus,   inicroalgae,   macroalgae,   eelgrass,  and
 phytoplankton, were not  possible because  the  data only  exist  for two sources,
 the  macroalgae  and  eelgrass.  The macroalgae  community  was  extremely diverse,
 including  24  prominent" taxa   in  the intertidal zone  and  31 taxa  in the
 subtidal.  Microalgae (mostly  benthic diatoms) were  most common in  the upper
                                        43

-------
     MOO «/
         ,213)
                     INTERTIDAL/SUBTIDAL- ROCK /COBBLE
                                                                     PISCIVOROUS
                                                                     MARINE
                                                                     MAMMALS
o
 o
  o~
  o-
                                                                                 o
                                                                                8ENTH1VOSOUS
                                                                                BIRDS
                                                                                (0.51)
   O '^5
   O o.i-
                                           DECOSIT DEIBITI-/HEBBI-
                                           FEEDINC VOHOUS /VOROUS
                                                AMPHI-
                                                PODS
                                                (10.931
                                                                                                                SUSPENSION
                                                                                                                FEEDING
                                                                                                                TANAIDS
                                                                                                                15.79)
                                                                                                  EELSRASS
                                                                                                  (296.91)
                                                I f I
Figure 8.   Characterization of  rock/cobble intertidal/subtidal habitat  food web.
             of major taxa  represented  in parentheses(grams/m2 or  grams/m3).
                                                                                           Average biomass

-------
tidal zones where they were grazed upon by herbivorous amphipods, gastropods,
and polychaetes.

     Benthic  infauna  associated with sediments  under  and around cobbles and
epibenthic primary• consumers utilize  three food  sources (suspended matter,
detritus,  and attached  plants)  to some  extent, with the suspension feeders
illustrating  the highest  standing  stock.   Despite  the  high  exposure  and
well-flushed  habitat,  detritus  feeders  are often numerous  and suggest that
the high relief of the substrate, with  cracks,  crevices  and algae holdfasts,
is  conducive  to the  retention of large  detritus particles  in the sediments
associated  with   cobbles.    Polychaetes  (including  most   often  Polydora
pygidialis and Thelepus  crispus) and decapods  (Pagurus spp.) were found to be
the  prevalent detritivores,  with  gammarid  amphipods  and  insect  (dipteran)
larvae being secondary in importance among the  10 detritivore-fceding groups.
Gastropods, chitons, and echinoderms made up  about  90%  of the standing crop
of  herbivores  feeding  upon macroalgae  and  microalgal scums.   Barnacles
(Balanus spp.) and bivalves  (including Mytilus  spp.,  Saxidomus giganteus, and
Clinocardium spp.) dominated  the suspension  feeders,  composing 68% and  28% of
the total standing crop  of  that  group,  respectively.

     Omnivorous  decapods   (Hemigrapsus   spp.)   utilized  both   detrital  and
macroalgal food sources.

     The high standing stock of sessile  suspension feeders was reflected in
the secondary consumer level, which was characterized  by high  standing  stocks
of  their predators, including echinoderms  and  gastropods.  These two  groups
together comprised 89% of the total  estimated  standing stock at that trophic
level.   Polychaetes   (Pholoe minuta),  decapods  (Cancer  oregonensis),  and
nemerteans composed the  remainder  of  the  secondary consumers.

     Among  the tertiary  consumers  the demersal benthivorous  fishes composed
the highest proportion of the standing stock,  primarily  because  they included
two  of  the  largest  predators  in  the habitats'  fish  community,  the kelp
greenling  (Hexagrammos  decagrammus)  and  the  lingcod  (Ophiodon  elongatus).
Epibenthic  planktivorous fishes,  though  composing a more diverse element of
the  community, accounted for less  than one-half of the standing stock  of the
demersal  fishes;  yellowtail  rockfish  (Sebastes  flavidus),  black rockfish
(S. melanops) and  copper rockfish  (_S.  caurinus) were the prominent species in
this group.

     The  added dimension  of the  intertidal and  shallow subtidal  substrate
also contributed to a greater  diversity  of birds foraging in these  habitats.
The  benthivorous species,  primarily the  Surf  Scoter,  White-winged Scoters,
and  Glaucous-winged Gull,  completely dominated  this group.

     The most important  marine  mammals to utilize prey resources within these
habitats  included  the  killer  whale  and Pacific harbor seal,  though  they
likely   forage   primarily  in  nearshore   and   offshore   waters.    Both  are
opportunistic fish-eaters.

     In  general,  this  food  web  is  broadly based upon  a variety of  carbon
sources  including  detritus, although  a greater  proportion of the detritus


                                     45

-------
generated  by  the  extensive  macroalgae  production  in these  habitats  is
probably exported into other, more protected habitats.  The major transfer of
trophic  energy,  at  least  in  terms  of  maintenance of  standing  stock  of
consumer organisms, however, is through  macroalgae  herbivores  and suspension
feeders.

IV. A. 3. b.  (3)  Exposed  unconsolidated habitats.

     The  high exposure  to waves and  the  unconsolidated  character of coarse
sediments typifying these  habitats generally do  not allow benthic vegetation
to  attach or  persist to any degree.  Thus, the majority of  the autotrophic
production  from within the  habitats  is  from phytoplankton production.   The
food web,  however,  is characteristically based  upon detritus (Figure 9).  It
appears  that spits, pocket beaches, and  headlands  exposed to heavy current
and wave transport  receive a relatively high biomass of detached macroalgae
and  other organic  detritus from  adjacent habitats.   In these  high-energy
systems  the large  detritus particles are  quickly  broken down  into smaller
particles  by  the  grinding  action  of  the  coarse  sediments  and  are  made
available  to the assortment of detritivores which  are able to persist in the
unconsolidated sediments.   Among these detritus  and general  deposit feeders,
the  gammarid  amphipods  (especially  Paramoera   mohri  and Paraphoxus  spp.)
comprised  the highest  proportion  (83%)  of  the   standing stock;  echinoderms
(Dendraster  excentricus),  polychaetes (especially  Scoloplos  pugettensis) and
oligochaetes constituted most of the remaining standing stock.

     Comparing  standing    stock,   however,    suspension-feeding   bivalves
(including Mysella  tumida and Psephidia  lordi)  were the more predominant of
the primary  consumers at  this trophic level.  Because the weight of bivalves
included  that  of  their  shells  and  these  animals  are long-lived,  their
dominance  may  have been  overestimated  when calculated   from  standing  stock
data.   Despite  a  relatively  high  average  standing  stock  of  macroalgae,
herbivores that consume attached plants were sparse and limited to gastropods
and amphipods.

     Epibenthic  omnivorous  crustaceans  (the mysids Ac an thornysis  sculpta,
A. nephrophthalma,  and Neomysis mercedis) and an omnivorous fish (the buffalo
sculpin, Enophrys bison) filled the position intermediate between the primary
and secondary  consumers in their ability to  utilize both living  and detrital
food sources.

     Secondary consumers in the food web representing exposed unconsolidated
intertidal/subtidal habitats were more  diverse  and abundant  than in any of
the food webs  discussed previously.   Carnivorous nemerteans  and polychaetes
(primarily  Onuphis  sp.)   and  epibenthic  planktivorous  fishes   (12  common
species,  including  redtail  surfperch,  Amphistichus   rhodoterus;  juvenile
English  sole,  Parophrys  vetulus;  and  juvenile Pacific  tomcod,  Microgadus
proximus) prey upon the diverse array  of  epibenthic animals,  the majority of
which are  detritivores.   Carnivorous  gastropods  (including Natica clausa and
Nucella sp.)   and   demersal  benthos-eating   fishes  (8  species,   including
juvenile   starry    flounder,  Platichthys   stellatus;  juvenile   sand  sole,
Psettichthys   melanostictus;  and   Pacific  staghorn  sculpin,   Leptocottus
armatus) were  somewhat less important.
                                      46

-------
    INTERTIDAL/SUBTIDAL-EXPOSED UNCONSOLIDATED
                                 PISCIVOROUS
                                 BIRDS
                                 KO.OI)
                                           PISCIVOROUS
                                           MARINE
                                           MAMMALS
                                                  BENTHIVOROUS
                                                  BIROS
                                                  (0.00
               EPIBENTHIC
               PLANKTIVOROUS
               FISHES
               (4.01)
                            CARNIVOROUS
                            POLYCHAETES
                            (4.81)
                                 CARNIVOROUS
                                 GASTROPODS
                                  1.90)  '
                              DEMERSAL
                              BENTHIVOROUS
                              FISHES
                              (1.50)
                                                     OMNIVOROUS
                                                     FISH
                                                     (0.11)
                                                                OMNIVOROUS
                                                                MYSIDS
                                                                0.03)
                                                                  HERBI-
                                                                  VOROUS
                                                                  GASTRO-
                                                                  PODS
                                                                  (0.15)
DETRITI-
VOROUS
OLIGO-
CHAETES
(2.67)
DETRITI-  DETRIT1-
VOROUS   VOROUS
        HARPAC-
        TICOID
DEPOSIT
FEEDING
POLY-
CHAETES
(3.63
DETRITI-  DETRITI-
VOROUS   VOROUS
        CUMACEANS
HERBI-
VOROUS
AMPHI-
PODS
(0.02)
SUSPENSION
FEEDING
TANAIDS
(0.74)
SUSPENSION
FEEDING
BIVALVES
(156.73)
AMPHI-
PODS
(56.71)
OSTRA-
CODS
KO.OI)
                      ^COPEPODS
                       (0.01)
                                                         MACROALGAE
                                                         (81.19)
                                                                            PHYTOPLANKTON
   BENTHIC
   MICROALGAE
DEPOSIT
FEEDING
ECHINO-
DERMS
(S.30)
Figure 9.   Characterization of exposed unconsolidated intertidal/subtidal
              habitat  food  web.   Average1biomass of major  taxa  represented
              in parentheses(grans/m2 or grams/m3).
                                           47

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     Benthos-eating birds,  including  the  Glaucous-winged Gull  (71% of  the
standing stock), Surf Scoter (9%), and the  California Gull (7%)  dominated the
standing stock  of  tertiary consumers, which also included fish-eating  birds
(i.e., Great Blue Heron) and marine mammals (the harbor seal).

     The standing  stock  of primary  producers was  relatively  low  in  these
habitats.   However,  the food  web was  also  highly  dependent  upon  detritus
processing.  It  included many  secondary consumers.   It also included a high
biomass  of  suspension  feeding  bivalves.   Biomass data  for  bivalves may  be
overestimated because  they  include  the dense shells.   Nevertheless,  these
bivalves represent an interesting  carbon sink  in this food web in  that they
are  not preyed  upon  by very  many species.   Thus,  standing  stock  of  these
molluscs,   though   comparatively   high,   is   generally   not   effectively
incorporated into  the community's food web at higher consumer levels and may
have been disproportionally  allocated to respiration.  Accordingly, most  of
the  turnover  of trophic energy within these habitats must be assumed  to be
regulated and limited by the import  of detritus and by the rate  of physical
and microbial processing of the detritus particles.  We  have no  information
on these various processes and  their  rates.   They  would  appear  to be very
seasonal in nature due to  the seasonal growth and die-off of algae and  other
plant  material, the  magnitude  of  wave  action which  controls  mechanical
disintegration,   and  the   temperature  and  nutrient  regimes  which  regulate
microbial decomposition of the detritus.

IV. A. 3. b. (4)  Protected unconsolidated habitat.

     The influence of  topographic protection  from  winds  and  currents  was
evident  in the food webs  characterizing  protected  habitats  and can  be
directly related  to  the  structure  and  stability  of  the  sediments  which
accumulate  there.   The most   notable effect  of  protection was   a  marked
increase  in  the  overall  diversity   (number  of  nodes)  of  the  food  web
(Figure 10).  High diversity was due to the biomass  of benthic infauna,  which
are  restricted   in their  ability  to  populate  the  exposed  unconsolidated
sediment habitats, and the greater  in-situ  production  of  plants and  the
accumulation and retention of detritus  produced elsewhere.

     While  the  apparent  input  of  detritus  particles  in  other  habitats
originates   from outside sources,  it would  appear  that  the  protected-soft/
intertidal-subtidal habitats generate high standing  stocks of macroalgae and
plant material  which,  if  not consumed  by  herbivores, eventually  contributes
to the  detritus pool  within the habitat.  Macroalgae common to  the habitat
included Enteromorpha spp., Rhizoclonium  sp.,  and  Fucus distichus in  the
intertidal  zone and Laminaria  saccharina  and  Gracilariopsis  sjoestedtii in
the  subtidal  zone;  eelgrass  was  predominantly  Zostera marina;   saltmarsh
plants  included a diverse  assortment  of vascular plants, represented by
Scirpus (sedges).

     Detritus   was  consumed   or  processed   primarily  by  deposit-feeding
polychaetes  (primarily  Lumbrineris   sp.,  Owenia   fusiformis   and   Tharyx
multifilis)  and bivalves (primarily Macoma nasuta),  which together  formed 94%
of the  estimated  total  standing stock of detritivores.  By  contrast, true
suspension-feeders  were dominated by a diverse  group of bivalves,  including
                                     48

-------
                    INTERTI DAL/SUBTIDAL- PROTECTED SOFT
                                                                          O
                                                                        BENTHIVOROUS
                                                                        BIROS
                                                                        (0,22)
           CARNIVOROUS  CARNIVOROUS
           NEMERTEAN   DECAPOD
           (3.81) _•*.    (0.46)
                                                                                                                  O
                                                                                                                 HERBI-
                                                                                                                 VOROUS
                                                                                                                 BIRDS
                                                                                                                 (O.06)
                                                                                                       EELGRASS   /BALTMARSH
                                                                                                       (2036.51) /VASCULAR
                                                                                                               PLANTS
                                                                                                               (5225.3)
Figure 10.   Characterization of  protected unoonsolidated intertidal/subtidal habitat  food web,
              Average biomass of major  taxa represented in parentheses(grams/m2 or grams/m3).

-------
Protothaca   staminea,   Transennella  tantilia,   Tresus   spp.,   Clinoeardium
nuttallii. Tapes japonica, Mytilus edulis, and Psephidia lordi.

     Of the  consumers  forming the second trophic  level  in  the  food web, 88%
were carnivorous polychaetes such as Dorvillea spp., Eteone  sp.,  and Exogone
sp. which prey principally upon other polychaetes and meiofaunal crustaceans.
Gastropods  (primarily Nassarius  mendicus  and  Aglaja  diomedea)  were  also
conspicuous   predators  upon   the   high  biomass  of   deposit-feeding  and
suspension-feeding bivalves.

     Epibenthic  plankton-eating fishes  (primarily shiner perch, Cymatogaster
aggregata,  tidepool sculpin,  Oligocottus  maculosus,  juvenile  English  sole,
Parophrys yetulus, and rock sole, Lej>idopsetta bilineata) composed a standing
stock   of  higher   carnivores  more  than   twice  that  of   the   demersal
benthos-eating   fishes   (primarily  Pacific   staghorn  sculpin  and  starry
flounder).   Benthos-eating  birds  (Glaucous-winged Gull)  preyed  upon  the
abundant bivalves in the  first consumer level.
                                             *
     The prominence  of eelgrass had  the  functional effect of magnifying both
the  diversity and standing stock of the food web.  Although the diversity of
epibenthic  zooplankton did not appear to  increase within the eelgrass beds,
the  density  and standing crop  of  these  organisms,  especially harpacticoid
copepods, were orders  of  magnitude higher  than in the areas of these habitats
which  did not have any  eelgrass  (Simenstad et  al.,  1980).  And,  while the
nearshore fish sampling conducted in this  region was not designed to separate
such  microhabitat-associated  fish  assemblages,   there were  indications that
certain  species  of nearshore fishes,  including  bay  pipefish  (Syngnathus
griseolineatus),  shiner perch  (Cymatogaster aggregata),  silverspotted sculpin
(Blepsias cirrhosus),  penpoint gunnel  (Apodichthys flavidus), crescent gunnel
(Pholis  laeta),  and  padded  sculpin  (Artedius   fenestralis),  were  uniquely
associated  with  the  eelgrass.   Thus,  46%  of  the epibenthic-feeding  fish
species in  the secondary consumer level of  the  food web could be attributed
directly to  the presence  of the eelgrass.  At  this point,  however,  we cannot
verify  whether this association  was a  function  of trophic linkages to the
epibenthic prey organisms associated with  the  eelgrass beds  or  of the struc-
tural aspects of the eelgrass  beds as hiding places from predators.

     Eelgrass also acts to enhance the accumulation of detritus particles by
creating low energy zones where suspended matter can  settle.   Although there
is little information  on the  effect of  eelgrass upon the  rates  of detritus
accumulation  and decomposition, we  can validly assume  that the majority of
the  processing  of the detritus particles  in these habitats is biochemical
rather  than  physical  and that entrapment and  retention is conducive to the
microbial breakdown  of the detritus  particles into a form utilized as food by
detritivores.  The  association between  detritivorous epibenthic crustaceans
and  eelgrass  also   suggests   that these  animals  are  probably  playing  an
important role  in processing  the detritus entrained  by the eelgrass plants
and whose populations  are consequently enhanced.   The  fact  that the majority
of detritus  processing is  a  function of  biochemical  activity suggests that
the  rate  of detritus  production available  for  detritivores would  be much
slower  in these  habitats  than in  physically-controlled  habitats  but also
spread out over a longer  time  period, e.g., prone to less seasonal variation.
                                     50

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     The third role  of  eelgrass is obvious,  for it seasonally supports high
densities of  herbivorous birds,  specifically the  Black Brant  and  American
Wigeon,  which  forage directly upon  the intertidal plants  during  winter and
spring in these habitats.

IV. A. 3. b.  (5)   Summary.

     Although the dramatic differences  in productivity at different levels of
the food web  practically negated  our ability to  compare the characteristic
food webs from differing habitats,  the  comparison of the food web diversity,
in terms of  the  number  of  feeding groups and standing  stock within feeding
groups  deserves  some  attention.   Table  3   illustrates  the  proportions  of
biomass among the trophic groups in the  five  habitat  types  represented in the
study  area.    In terms  of  standing  stock  of   organisms,  the rock-cobble
intertidal/subtidal habitats had the highest  biomass  at all  levels except the
deposit-feeder/detritivores.      Suspension-feeders    in     the    exposed
unconsolidated/intertidal-subtidal habitats  had  a higher standing stock than
those  in the  protected  soft/intertidal-subtidal  habitats,  reflecting  the
influence  of  dense-shelled  bivalves,   particularly   in  subtidal  Guemes
Island-south area.

     From this synthesis it is apparent  that  diverse  communities of organisms
have  evolved  to  utilize the  divergent   sources  of  plant-produced carbon and
detritus available  in the  region's marine  habitats.  The  rate of  flow and
distribution of  this trophic  energy through the  food web also varies between
communities and  appears  to  be a function of  1)  amount and  rate  of utilizable
carbon   (detritus,   macroalgae,  phytoplankton)   entering   the  habitat  or
generated within it;  2)  the  stability  and spatial  heterogeneity  of the
habitat, and  3)  the effect  of  upper trophic  level predators in  structuring
the lower trophic levels of the  communities.

IV. A. 3. c.  Species richness,  abundance  and biomass.

      Summaries  of  the  quantitative data  collected for  each  category of
organisms are presented  in  this  section.  Average values  have been calculated
for  each of  the eight  habitat types   (each habitat  usually represented by
several  specific sampling  sites) on a  seasonal  basis.   These data were used
to  identify  major  differences between  habitats  on a seasonal basis.   Plants
were  not included due to the  difficulties  involved in quantifying  them.

IV. A.  3. c.  (1)  Species richness.

      Our  present   understanding  of  the  distribution  of   marine   mammals
precludes any attempts to relate their  occurrence to any particular  subtidal/
intertidal  habitat  type.   However, a few  general statements  based  upon
presumed or  known  behaviors  of  some species can be  made.   Harbor seals were
most  often  observed hauled out  on protected rock  and exposed unconsolidated
habitats.    Sea  lions   generally  hauled  out   on  protected  rock.    These
occurrences only reflected  resting behavior and, in the  case of harbor seals,
pupping  and  nursing activities  as well.   Foraging  activities,  a  critical
portion  of the time budget  of these species, were  generally conducted  in the
nearshore habitats  (harbor  seals)  and offshore habitats  (sea lions).
                                       51

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ro
    Table 3.   Number of feeding groups (in parentheses)  and mean annual  standing  crop  (g/m2 or  g/m3)'
              in marine habitats of northern Puget Sound and the Strait  of  Juan de  Fuca.
Habitat Types
Protected
Unconsolidated
Intertidal/
Subtidal
Exposed Uncon-
solidated
Intertidal/
Subtidal
Rock-Cobble
Intertidal/
Subtidal
Nearshore
Neritic
Offshore
Neritic
Primary Deposit-feeders
Producers and detritivores

(4)
7635.49

(3)
81.19
(4)
7842.87
(1)
0.40
(1)
< 0.10

(10)
451.36

(8)
68.35
(10)
160.45
(0)
< 0.01
(0)
< 0.01
Micro- and
Macroalgae
Herbivores

(3)
13.43

(2)
0.18
(5)
741.40
(0)
0.00
(0)
0.00
Suspension-
feeders

(5)
72.12

(2)
160.48
(5)
647.57
(1)
- 0.20
(1)
- 0.50
Carnivores

(8)
25.42

(7)
15.53
(10)
118.35
(6)
0.27
(6)
0.09
Omnivores

(2)
1.76

(2)
0.14
(1)
42.81
(1)
< 0.01?
(0)
< 0.01?
    "Standing crop is expressed as g/m2 in intertidal/subtidal habitats; g/m3 in
     offshore and nearshore habitats.

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Depending upon  the occurrence  of sea lions  (two  species),  harbor seals,  or
river otters, species richness for marine mammals  rarely  exceeded  two  at any
site.

     The mean total species  richness values  for the  other biotic  groups are
shown in Figures  11-14 for each  season.   The values reflect the averages of
many observations made throughout the study area.

     The  largest  number  of  bird  species,  either  annually  or  seasonally,
occurred at the protected mud habitat.  These data illustrate the importance
of  areas  like Padilla  Bay,  a protected muddy  site,  to marine birds.   Other
habitats having a relatively large number of  species  throughout the year were
the protected mud-sand and mud-gravel habitats  along with the exposed mixed
coarse habitat.  In the  fall  and winter the  cobble  habitat also supported a
large  number  of  bird  species.   Year-round,  the lowest  numbers generally
occurred at  exposed  and protected rock sites.   Clearly the lowest number of
bird species  at  nearly all of  the intertidal/subtidal  habitats were found in
the summer.

     On  an  annual  or  seasonal  basis,  the  number   of  species of  fish was
highest  at  the  protected  mud  gravel  habitat; but  otherwise the  number of
species  was  fairly  similar   (note that  the  rock/cobble  collections are
incomplete).  Generally,  the lowest numbers  occurred  at  protected rock and
exposed  sand sites.   Seasonally, the tendency  was  for the lowest number of
species in the winter and  spring, and  the  most in  the summer and fall.

     No  seasonal summations of intertidal/subtidal  species richness data are
available for invertebrates due to unresolvable problems with the data  sets.
However, species richness was  generally highest at  exposed rock sites  (e.g.,
Pillar  Point, Tongue  Point),  followed by cobble and  protected rock  sites.
For example, mean  annual species  richness  for rock and cobble sites along  the
Strait varied from 38  to 169  at the  +3 foot tidal  elevation; whereas that  for
other  habitats  was typically  lower  (1.5 to  45.3).   Species  richness was
usually  lowest at  exposed  sand  and  exposed mixed coarse sites.

IV.  A. 3. c.  (2)   Abundance of  organisms.

     No  habitat-related trends  in abundance  are apparent  for  marine mammals.
Though  Table 2 above  shows  that many of  the major harbor seal haul-out areas
are rock,  their  popularity is probably mainly related to isolation from human
disturbance  rather than the type of substrate.

     Total  mean abundance of  the  other biotic groups per  habitat  type  is
shown  in Figures 15-18 per season.   The reader should note that the abundance
of invertebrates is about 10* times greater  than that of  fish or  birds  as  is
indicated  on the vertical  axis label of Figures  15-18.   Also,  the abundance
values  for  tidepool fishes at rock and cobble habitats have not been included
because  they  were  not obtained in a comparable manner  to  other  nearshore
 fishes.

      Bird   abundance  was  quite  seasonal  but one habitat,  the  protected
mud-sand habitat  such as  found  at  Jamestown,  had  relatively high  numbers


                                       53

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                   EXPOSED
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                                    EXPOSED
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                                                COBBLE
       PROTECTED       EXPOSED
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Figure 11.  Numbers of species of intertidal/subtidal fish(shaded bars) and
         birds(hatchad bars) in the winter at (a) protected habitats,
         (b)exposed habitats, and (c) rock and cobble habitats.
                          54

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 40-
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                   EXPOSED
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  Figure 12.  Numbers of species ot intertidal/subtidal fisMshaded bars) anc
           birds(hatched bars) in the spring at  (a) protected habitats,
           (b) exposed habitats, and (c) rock and cobble habitats.
                          55

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  Figure 13.  Numbers of species of intertidal/subtidal fish(shaded bars) and
           fish(hatched bars) in the summer at  (a) protected habitats,
           (b) exposed habitats, and (c) rock and cobble habitats.

                          56

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  Figure 14,  Numbers of species of intertidal/subtidal fish(shaded bars) and
           birds(hatched bars) in the fall at (a) protected habitats,
           (b) exposed habitats, and (c) rock and cobble habitats.

                           57

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       Figure 15.  Abundance of  intertidal invertebrates(open bars)  subtidal inverte-
                bratesdined  bars), fish(shaded bars) and birds(hatched bars) in
                the winter at (a)  protected, (b) exposed and (c) rock and cobbl<

                habitats,
                                58

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Figure 16, Abundance of intertidal invertebrates(open bars), subtidal inverte-
         bratesdined bars), fish(shaded bars) and birds (hatched bars) In
         the spring at  (a) protected, (b) exposed and (c) rock and cobble
         habitats.         59

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throughout the year.  In the winter, relatively high abundances of birds were
also found  at the  other protected habitats.  Very high numbers  occurred in
the spring at the cobble habitat associated with herring spawning, and in the
fall fairly high numbers were found at the exposed sand habitat.

     Fish abundance was  characterized by  consistently  high numbers  of fish
throughout  the year  at the  protected mud-gravel habitat  such as  found at
Beckett Point.  Other habitats where numbers of fish were relatively high on
a  seasonal basis were  the protected  mud and  exposed  sand habitats  in the
winter, the protected mud/mud-sand and exposed  sand/mixed coarse  habitats in
the summer,  and  the protected mud-sand and  exposed mixed coarse  habitats in
the fall.

     Invertebrates, both in intertidal and subtidal zones,  stand out as being
particularly abundant at the cobble habitat  throughout the year, illustrating
the  dense biota  at  sites  like  Cherry  Point  and Morse Creek.   Intertidal
invertebrates  were also  abundant  throughout  the  year at the  other  rock
habitats  (protected and exposed) and  the protected unconsolidated habitats.
With the exception of some exposed mixed  coarse habitat sites  in  the summer,
intertidal  invertebrate  abundance was  lowest  at  the  exposed  unconsolidated
sites.   Subtidal  invertebrates  appeared   to be most  abundant at  protected
mud-sand sites.

IV. A. 3. c.  (3)  Biomass of organisms.

     Our understanding of the role of marine mammals in the aquatic ecosystem
is not clear enough to allow for an accurate assessment of  biomass  by season
by habitat  type.   The fact that harbor seals  may haul out on protected rock
habitats in greatest numbers in the fall  does not  necessarily  imply that the
sum of their biomass is of any special importance  to that habitat.  As marine
mammals relate to the ecosystem, their biomass  plays  a significant  role only
in the nearshore  and offshore habitats.   A minimum estimate of the number of
harbor  seals  in  the  study  area  is  1,900  (Everitt et  al.,  1980),  and
individual animals may reach 110 kg.  Sea lions occur in smaller numbers with
California sea lions numbering to 300 individuals  (primarily males  which can
weigh up to 275 kg) and northern sea lions numbering to 260 individuals  (with
potential weights to 1,000 kg).

     The reader should note  that the biomass values  of invertebrates are on
the order of  102  times  larger than for fish,  and 10   times larger than for
birds—as indicated  in  the vertical  axis of  Figures  19-22.   Also, biomass
values for tidepool fishes at rock and cobble habitats have not been included
because  they  were  not  obtained  in a comparable  manner to  other nearshore
fishes.

     Bird biomass  was consistently high  at the  protected mud-sand habitat
throughout the year.  On a  seasonal basis,  relatively  high biomass was seen
at the  protected  mud/mud-gravel habitats  in  the  winter  and  at  the cobble
habitat in the spring.

     Fish biomass,  besides being very  high at  the protected rock habitat
throughout the year,  was also  relatively high at the  protected mud-gravel


                                     62

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                  EXPOSED
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     Figure 21
        Biomass of intertidal invertebrates(open bars),  subtidal inverte-
        brates(lined bars), fish(shaded bars) and birds(hatched bars)  in
        the summer  at  (a) protected,  (b)exposed and (c) rock and cobble
                *Does not include tidepool fishes.

                        65
              habitats.

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     Figure 22.
              PROTECTED        EXPOSED           COBBLE*
                 ROCK*             ROCK
              Biomass of intertidal invertebrates(open bars), subtidal inverte-
              brates(lined bars), fish(shaded bars) and birds(hatched bars) in
              the fall at (a) protected, (b) exposed mud and (c) rock and cobble
              habitats.    *Does not include tidepool fishes.

                              66

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habitat throughout  the year.   Seasonal  highs  for fish biomass were  seen at
the protected mud and exposed sand habitats in the summer and  at  the  exposed
mixed coarse habitat in the fall.

     The most obvious feature of the graphed biomass data is that biomass for
most groups was  highest  at either protected unconsolidated  habitats  or rock
habitats.    Both  invertebrates   and  fishes  had  very  high  values  at  the
protected  rock  habitat  during  all  seasons.   The high  biomass values  for
invertebrates were  due to  the occurrence of many  large and/or dense-shelled
invertebrates.  Because of these same biotic groups, invertebrate biomass was
also  relatively high  during all  seasons  in   the  cobble habitat.   In  the
spring, the subtidal  invertebrate biomass  was  high  in  the exposed  mixed
coarse habitat.

IV. A. 3.  d.  Migrants.

IV. A. 3.  d. (1)  Rock/cobble.

     Marine mammals:   Sea lions  are  the only  migratory  marine  mammals that
utilize rock habitats  primarily for resting.   Sea lions  move  into  the study
area from  breeding  grounds further north and  south  and are most abundant in
the winter.   Total  combined  counts  of over  300 animals have been recorded
during winter  surveys.  Neither  the  seals nor  the  sea lions apparently use
the cobble habitat in  the study area for hauling out.

     Birds;   Census data did not  permit  differentiation  between exposed and
protected  rock  types.  The seabird censuses were  not focused closely  enough
on  shoreline intertidal/subtidal habitat  types  to  include  only  migratory
species associated  directly  with  rock substrate.   The censuses at  Fidalgo
Head, for example, included diving ducks foraging  off nearby Shannon Point (a
different  substrate);  thus,   the data  in  Appendix  Table  III-B  do  not
characterize  Fidalgo  Head itself.  Of the  very large numbers  of  migratory
birds  which may  be observed nearby,  only a  very  few  use  rock  substrate
habitats for foraging.

     Yearly peak  numbers  of  migratory birds were much lower than those in
other  habitats,  but migrants occurred in fall  through  spring.  They included
Harlequin  Ducks  and  small   numbers   of  "rock"   shorebird  species:   Black
Turnstones, Surfbirds, a few  Rock  Sandpipers, Ruddy Turnstones, and Wandering
Tattlers.   Gulls  included resident  Glaucous-winged Gulls,  but  also migrant
and  wintering  species  like  California,  Mew,  Bonaparte's,  and  Heermann's
Gulls.  Migrant  gulls  were observed  foraging  in rocky intertidal  areas, but
often  used rocks above  tidal  influence for  resting  and waiting for feeding
opportunities in tidal fronts offshore.   Black  Oystercatchers are  a resident
species,  but form  flocks  in winter (up to  40  birds)  which appeared to move
about  among rock habitats  of  the study area.

     Seabird  data for cobble substrates were  obtained at  the  Cherry Point
area.   Populations  there  were characterized  by  great  seasonal variations.
The  lowest numbers were  found  during the summer months.   Large  numbers of
migratory  diving ducks often appear  in  the fall and spend  the  winter along
this  shoreline.   The  density of  birds  and the  seasonal range in abundance
                                      67

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were  usually  lower in  cobble habitats where  Pacific herring  do  not spawn.
The  most abundant  species  (Appendix  Table  II-B)  included  Greater  Scaup,
Common Goldeneye, Bufflehead,  Harlequin Duck,  White-winged and Surf Scoters.
In addition to resident Glaucous-winged Gulls, wintering Mew Gulls and spring
and fall migrant Bonaparte's Gulls used the cobble habitat.  Along the Strait
of Juan  de  Fuca,  Heermann's Gull was  a common migrant and  summer resident.
Shorebirds  did  not occur  in appreciable numbers in  cobble  habitats,  though
some  species  like  Black  Turnstones  may  forage  there  on  occasion  during
migration.  The presence  of Sanderlings on  Appendix Table  II-B  represents
occurrence in an adjacent habitat, not in cobble itself.

     Fish;  The single most  obvious  seasonal  feature of  the cobble habitat
type  involving  migratory  fish  is  the  Pacific  herring   spawn  in  late
winter-spring.  Along  the eastern Georgia  Strait  this phenomenon represents
the end result of a large migration of this species in nearshore waters, with
herring eggs deposited on intertidal/subtidal vegetation, rocks, and pilings.
The cobble areas and adjacent exposed unconsolidated habitats are  one  of the
most  important  marine  spawning  habitats  in  the study  area.   The  herring
spawning activity,  in  turn,  attracts  very  large numbers of  birds described
above.   In eastern  Georgia  Strait,  it  takes  place  when marine  birds are
moving northward in the spring; and for some  populations  this phenomenon may
represent an important staging/feeding concentration during migration.

IV. A. 3. d.  (2)  Exposed unconsolidated.

     Marine mammals;  The only species of marine mammal utilizing the exposed
unconsolidated  habitat  to  any significant degree is  the nonmigratory  harbor
seal.  The  migratory sea  lions  apparently  do  not use this  habitat type for
hauling out, though they may forage in the subtidal zones.

     Birds;   Birds  of the two exposed  unconsolidated habitats—mixed coarse
and  sand—had similar  species and seasonal characteristics  (Appendix Tables
III-D  and  III-E).  Patterns  of  migration involved  essentially a passage of
several gull  species  and Common Terns through  the  area during  the  fall;  an
influx of  large numbers  of  diving  ducks in the fall for the overwintering;
and a subsequent emigration of these ducks in the spring.

     Bald  Eagles,  found  in small  numbers  on  most  shorelines  of  the study
area, were  observed more  frequently  along the shorelines of  the  San  Juan
Islands.    They  migrated  into  the  area  during  the winter.   As  in other
shoreline habitats,  a large  proportion of  the fall  gull  populations  were
using the shorelines for resting between foraging flights offshore.

     Exposed  unconsolidated  habitats  generally   support  few  shorebirds,
although these  are characteristic  habitats  for  Sanderlings.   This species,
while common on the outer  coast  of  Washington, occurs in  small numbers as a
spring and fall migrant and as a winter visitor in the study area.

     Fish;  Important movements of a number of  fish species are known to take
place  in or  adjacent  to  exposed  unconsolidated  habitats.   These include
juveniles of  important  commercial species,  especially pink  and chum salmon,
and including Chinook  and coho salmon.  Pacific herring accounted for 76% of


                                    68

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total numbers  of  fish and  75% ^of  total  biomass  in  samples  taken  in  our
studies.   Long-finned smelt and sand lance were also taken, though in smaller
numbers.   Maxima in species richness and standing stocks in summer and minima
in winter apparently reflect large migrations of herring.

IV. A.  3. d.  (3)  Protected unconsolidated.

     Marine mammals;  Similar to what was  observed  at  exposed unconsolidated
habitats, migratory marine mammals apparently do not use this habitat type to
haul out, though they may forage in subtidal zones.

     Birds;   Seasonal migration  patterns for  the  three  types  of protected
soft habitats  were  found  to be  similar  and magnitudes  of movements  were
large.    Very  large  numbers  of  diving ducks  (Appendix  Tables III-F-H) moved
into the protected  unconsolidated  areas  in  the fall  and  remained through
spring.  Where  eelgrass was  present,  species  like Black  Brant  and American
Wigeon also  occurred in  large  flocks.   The  Black  Brant  had   a  somewhat
atypical  migration   pattern,  with  very  large  numbers  occurring  in  most
habitats only  during  northward spring migration.   Only  a small number of
protected  eelgrass  emabyments  had  wintering brant populations,  though  the
species  was widespread from March into  May.   The  significant migrations of
the  two  primary eelgrass-associated species in and out  of  most bays were not
duplicated in Westcott Bay, where neither  species was recorded in  1978-1979.

     Sizable migrations  of dabbling ducks and  several  species of gulls  also
took place to and  from protected unconsolidated  habitats.   A number of these
species  also  wintered  in  the area,  from  about  September  through  April.
Because  these habitats supported many species  during  the  year  and Appendix
Table  II-B gives  only the 10 most  frequently  occurring species, there  were
many other species that occurred in sizable  numbers  that  were  omitted  from
the  tables.

     Protected habitats were  the most  important  areas  for Great  Blue  Heronsj
with  highest  populations  in  summer  and  early  fall,  and with  most birds
apparently moving  out of the area  during  the  winter.   These were  also the
primary  habitats  for shorebirds,  such  as  Killdeer,   Sanderling, and Black
Turnstone.  These  habitats have been reduced  by human activities  in  the study
area,  but still  support  considerable  migrant populations  of  species  like
Semipalmated  Plover, Whimbrel,  Greater Yellowlegs,  Short-billed Dowitcher,
and  Western  Sandpiper.  Dunlins arrived  in late fall and  winter  in  the study
area in  large numbers, and flocks of Black-bellied  Plovers wintered  locally.

     Fish:  Pacific  herring  often spawn  in protected soft  habitats in  eastern
Georgia  Strait, through  this migration/spawning is  of a much  lesser scale
than nearby  exposed  cobble and unconsolidated  habitats.   There  appears to be
movement of  Pacific  herring  larvae into  protected  habitats after  hatching.
Frequently, there  are also movements of  salmonids,  particularly  juvenile  chum
salmon,  in and  out of these  areas.
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IV. A. 3. e.  Variability between and within habitat types.

IV. A. 3. e.  (1)  Introduction.

     The  division of the  nearshore region  into  physically  defined  habitat
types  rests  upon  the  assumption  that biological  communities  are  closely
related  to  general  substrate profiles  and exposure.  Within  habitat types,
similarity  in  species  richness, biomass,  and abundance might  be expected.
Reasonably   similar  distribution   of   species  with   season   and,   where
appropriate, with tidal elevation might also occur.

     Thus far,  mean abundances  of species per  unit  area have been presented
without  particular   comment  on  the variation  associated with  those means.
Variation  in species abundance  has  been reported  in  various  ways by  the
individual  investigators.   For benthos and  dominant bird species, means and
standard deviations  were  available.  Webber  (1980)  reported  the  percent of
species  whose  coefficients  of  variation,  as  s/X x 100, were  greater than
100%.  Miller et  al. (1980) calculated the  power of the test  for detecting
hypothetical  decreases  in  fish numbers or biomass.  Variability in fish prey
spectra  was  described  by  calculating  an  Index  of  Affinity,   which  is  a
pairwise coefficient of similarity for Index of Relative Importance (I.R.I.)
values.   For marine mammals,  probable  factors  in  observed variation  in
numbers  were  discussed  in  the   text,  but  no  statistical  analyses  were
performed  (Everitt   et  al.,  1980).   In  general,  the variation  observed
probably  arises from several  interacting  factors;  and under  the sampling
programs used it is usually not  possible to  tell  which factors  had  major
effects.

     The first section of this discussion focuses  on sources of variation in
sample means  which   can be  demonstrated in  the data,  and the second section
describes briefly  the  overall  magnitude  of  variation  in the major  habitat
types.  In some cases it is possible to postulate  causes for major variation,
but most  of  the  variation could  be due  to  a number  of different  and  not
necessarily mutually exclusive causes.

IV. A. 3. e. (2)  Sources of variation.

     Main sources of variation in sample means for MESA/WDOE  survey data can
be divided into variation arising from sampling design,  and  that arising from
natural unpredictability of population abundance within  habitats.

     Aspects  of sampling  design  that  affect  measures  of  variation  are:
1) habitat  definition,  2) control  of  variable  factors  within  habitats,
3) reasonable  levels  of  replication  and   appropriate  sample  area,  and
4) quality  control.   In  all  surveys,  efforts  were  made  to  ensure  that
reasonable confidence could  be placed in  the  results,  given the  constraints
of  available time  and funding.   However,  the  efficacy of  the designs in
estimating species richness and abundance was not thoroughly investigated.

     Some elements  of habitat  definition for all  the  surveys were substrate
type and  extent of  the defined habitat  type.   For  fish and  bird surveys,
water  depth formed  another element of  habitat  type.   Substrate type  was
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consistently described,  although standard grain size  analyses with adequate
replication were not  always  performed.   For mobile  species,  such  as  birds,
mammals, and fishes, considerable movements over boundaries of substrate type
were qualitatively described.  Individual bird census tracks could not always
be broken down by substrate type, nor was it considered appropriate to do so.
The benthic survey  sites were chosen based partly on  substrate specificity,
but the definition of  substrate type was  largely descriptive,  rather than
quantitative.    As  a  result, habitats  defined  as  equivalent exhibit  some
degree  of  difference  in  patterns  of   species occurrence  and  abundance.
Exposed mixed  coarse  sites  are  a case  in point.   Mean  water depth  was  at
least estimated  for fish and bird habitats.   Especially  strong increases  of
bird species  richness and abundance in  shallow water  versus deeper water
supports the use of water depth in defining habitat for these  censuses.

     The  effect  of  habitat  extent  on   the  abundance,  occurrence,  and
preditability  of species holds  promise  for future study  for  all the animal
groups, but was  not specifically investigated in  the  baseline program.  One
example  of  the  effect was described by Miller  et al.  (1980).  Fish species
are more numerous at  the pocket gravel beaches on  San  Juan Island   (Eagle
Cove, Deadman  Bay)  than at gravel beaches  with  longer extent, such as South
Beach and Dungeness.  This trend occurred because  demersal fish species from
nearby  rock,   kelp,  or  eelgrass habitats  probably  regularly  forage  in the
gravel  area.  Local levels of abundance of birds and also  of benthic species
could be influenced by  habitat  extent as well.   For  instance, Osman  (1978)
showed  that species richness of benthic  species colonizing submerged plates
increased  as  the  area   of  the  plate  increased.   A relative  increase  in
immigration was  hypothesized to  account for this  increase.  This effect may
only  be  seen  where  the habitats  are  substantially  heterogeneous, since
species immigration in habitats of large extent might be reduced.

     Variation  in  physical factors  within  habitat  types  probably influences
both mobile and  sessile species.  Some of these  factors  are at least  related
to   season,   elevation  above  Mean Low  Low  Water  (MLLW),  hydrographic
conditions,  weather,   tide   stage,   and  both  chronic   and  catastrophic
disturbance.

     For benthos, variables that were consistently present were thought to be
the most important.   Seasonal and elevation differences were  investigated at
each habitat,  and  fairly undisturbed  sampling  sites  were chosen.  Subtidal
sampling  took  place at the same  tide  stage in  each season, to minimize this
possible source  of variation.  Local weather and hydrographic  conditions were
not  recorded  continuously,  so  observed  year-to-year variation  in  benthic
species abundance is  difficult to relate  to these  variables.   A massive die
off  of  limpets  has  been reported during  the  simultaneous occurrence of low
tides  and hot weather  in California  (Wolcott,  1973).   In the  study area,
mortality caused by depressed salinity  during heavy runoff could  also  occur.
Differences in the  magnitude of salinity  and  temperature  fluctuations could
make  the  difference  between normal  mortality or  catastrophic mortality,
especially if  juvenile  forms suffered high mortality  in  one year but not in
another.   In  the  MESA/WDOE  baseline  surveys,  distinctions between year
classes were  not routinely  attempted.   Even when massive recruitments were
seen,  it was  impossible to tell whether  physical  conditions were a major


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     One major contributor to this variation is the nonrandom distribution of
individuals  within  a  treatment  group.   A  treatment  group   consists,  for
instance,  of samples from one  elevation in one season, or  from one type of
sampling  gear in  one season.  None  of the surveys  included  designs  which
tested  for nonrandom spatial distribution.   Nevertheless,  nonrandomness was
obviously  common.   It is easiest  to  see this  in  mobile species  which form
flocks  or  schools, but benthic species may exhibit aggregation as well.  The
high  variation in tow  net  catches  probably  was  largely  due  to schooling
species,  such as  Pacific herring.   Often, Cither a  large  number was caught
when  schools were encountered, or none  (or  few)  were present.   For benthic
species,  the degree  of aggregation or patch size was not  measured for even
the most abundant  species, as it was  outside the scope of basic survey work.
It is,  therefore,  impossible  to tell  if variation was due to patchiness or to
low   replicate  number.   For some   abundant   species,  the  coefficient  of
variation  was less for individual  strata than  for all strata combined.  This
trend could  be  taken as an  indication that within  homogeneous conditions,
variance is  lowered.  Interpretations should be made cautiously, however.

      Another factor,  especially in  the estimation  of year-to-year variation,
is  the breeding  or recruitment success  of  the species  under consideration.
In  the benthic data  there are  indications  that in some years,  some species
had  much  better reproductive success than  in  other years.   This observation
was not consistent for  all species  in the same  year.

      Table 4 shows  several  examples  of  mean  abundance and  variability for
selected benthic species  as measured  by  the  coefficient  of  variation (CV) at
the   -1 foot level  in  summer.   These  examples  illustrate  the kinds  of
variation  to  be   expected  in benthic baseline data.   In  example  1,  mean
numbers of  the barnacles,  Balanus glandula/crenatus,  are  shown for several
rock  and cobble habitats.  Summer  samples taken at -1 foot  MLLW are used to
aid  in comparison.   Data  are missing  for several  of  the sites,  but 1976
appeared to  be a particularly successful year  for  barnacles  at .Cherry Point.
While  at  Tongue Point,  an exposed rock habitat,  barnacle  numbers were much
greater in 1977 than in  1976.   Barnacle numbers  at Cherry Point  were much
lower  in  1978 and 1979  than  in 1976, indicating  that 1976  was an unusually
good year at  this  site.   At  Cantilever Pier,  a protected  rock habitat, many
more  barnacles  were present  in 1977  than  in 1978; and  the CV was smaller in
1977  than  in  1978.   Cherry   Point  had  lower  numbers  and  a  higher CV for
barnacles  in  1978 than  in   1979,  indicating  that  conditions  for barnacle
survival were poorer in 1978 at this  site as well.  Partridge Point, which is
another cobble beach, had very  few barnacles  in  any of the summer sampling
periods.  Note  also  that the CV decreases  as  the means increase  within all
the sites,  which  is  a  weak  indication that barnacles are  not aggregated in
spatial distribution.

     Example  2 shows that for Fidalgo Head, a protected  rock habitat, Balanus
cariosus  was  quite  abundant  and  was  less  patchy  than   Balanus glandula.
JL* glandula was rare at this site in  the summer of 1976.

     Example  3  shows  that the polychaete Cirratulus  cirratus  had comparable
abundance and CV in 1978 and 1979.   The species was less numerous at
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        Table 4.  Examples of mean abundance and coefficients of variation for selected invertebrate
                  species at several  intertidal sites in summer.  Means normalized to 0.25 m2.
on

Species
Example 1
Balanus glandula/crenatus




Site

Partridge Point
Cherry Point
Cantilever Pier
Tongue Point
1976 1977
Elev. X CV "X CV

-I1 0
-I1 21210.0 0.3
-1' 976.0 0.9
0' 22.0 4197.5
1978 1979
X CV X CV

0.3 1.2 10.0 0.9
6715.0 0.6 0.2
1.8 1.6

        Example 2

        Balanus glandula

        Balanus cariosus

        Example 3

        Cirratulus cirratus



        Example 4

        Scoloplos sp.

        Oligochaeta
Fidalgo Head      -1'

Fidalgo Head      -I1



Partridge Point   -1'

Cherry Point      -I1



Fidalgo Bay       +1.5'

Fidalgo Bay       +1.5'
   4.0  1.3

1293.0  0.7
                            48.0   0.7   13.8  1.8

                           178.5   0.5  113.5  0.5



                           190.0   0.3   45.5  0.6

                          3760.0   0.4    9.0  0.9

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Partridge Point than at  Cherry Point in both years, and was more variable in
numbers in 1979 than in 1978.

     Example  4 shows  that  strong year-to-year  variations also  occurred in
homogeneous habitat types.  At Fidalgo Bay at the +1.5'  elevation in summer,
the polychaete Scoloplos  sp.  showed a mean count in 1978 that was four times
higher  than  in 1979.  The  CV in  1978 was  half as large  as that  in 1979.
Oligochaetes were about 400 times more abundant in 1978 relative to 1979, but
the CV was only about half as large in 1978 as in 1979.

     Published information on variations in species abundances indicates that
differential settlement as well as differences in successional stage occur in
a  range  of   habitat   types.    Eagle  (1975)  observed  patchy  but  stable
communities having different dominant species in  subtidal  soft substrates in
Liverpool  Bay.   He  hypothesized  that  these  arose  from  the  timing  of
catastrophic storms. Species more abundant  at the time of  a  storm as larval
forms   differentially   colonized  patches   disturbed   at   different  times.
Differences in successional stage, as described by Lubchenko and Menge (1978)
for rocky intertidal habitats, may  also contribute  to  high  variation about
estimated mean abundances when random sampling design is used.

     Variation in  the  abundances of  benthic  species  might be  expected to
result  in  variation of  prey spectra  of  opportunistic  bottom-feeding fish.
Miller  et  al. (1980)  showed that  the percent  prey overlap,  as  measured by
Sanders' Index of  Affinity on I.R.I,  values,  is not  particularly  high for
several  benthivorous  species.   For  example,  at  Port Williams   in summer,
tidepool sculpins apparently switched from gammarid amphipods as a major prey
item  in 1977 to harpacticoid  copepods in  1978.   The  abundance  of prey and
their rates of production are  unknown for this  time period,  and preferences
for different prey items in tidepool sculpin  are  unknown.

     Variations in fish species importance in the Strait sites were presented
in several different ways by Miller et al.  (1980). The rank order of species
abundance,  biomass, and frequency  of  occurrence  of  the  10  most  common
intertidal  fish  species  show that  changes   in  rank order occurred  for all
three  parameters.   These  changes were  due  to  the  occasional   capture  of
schooling species, such as smelt or herring,  and  also to the capture of large
individuals  of  such  species  as  spiny  dogfish  and  pink  salmon.   Yearly
variation in  exposed sand sites  may also be  partly due to  a large year class
of speckled sanddab in the Strait of 1978.  Some  regional variation was noted
as well.  The Strait sites had significant  numbers of sand sole and redtail
surfperch  which  were  absent  from  collections  in  northern  Puget  Sound.
Schooling species  generally  ranked  higher in.tow net collections  in northern
Puget Sound than in the Strait.

     The variation  of  site data was presented by calculating  the  probability
that specified decreases  in population density  or  biomass would actually be
detected.  The probability  of  detecting a 50% decrease in  numbers  or biomass
in beach seine samples was rather low in general, but  was  reasonably high at
Twin Rivers and Morse Creek for some seasons.  The probability of  detecting  a
75% decrease in numbers  or  biomass  was generally high, except in spring.   A
90% decrease  in  biomass  could usually be detected with a probability of over


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90%,  except at Jamestown in the  spring, where  the probability was still less
than  50%.   The probability  for  detecting  such  a decrease  in numbers  was
somewhat  higher at this site,  however.   For tow-net data, even a 90% decrease
in biomass or numbers could not necessarily be detected with a probability of
50%  or  more.    Even  a  95%   decrease  in  numbers  still  resulted  in  low
probabilities of detection in some cases.

     These data indicate  a rather high  degree of variation  in  all samples.
The ability to predict decrease in populations is also apparently not as good
as one would hope for.  One of the assumptions of the power analysis is that
the variance  in the  reduced   population  would be  the same  as  that in  the
original  population.   The variance  of  baseline  data  is increased  in  large
part  by the schooling species, and also by  the presence of aggregated larvae
and juveniles.  A decline  in  population would  likely  decrease the variance,
since the degree of aggregation would not be the same.

     For  bird  species,  the coefficients  of variation ranged  from about  0.5
to 4.   Values  for  the most abundant  species commonly  were  in a  range of  1
to 2.   Problems inherent  in habitat  definition and sampling  design no  doubt
played a  part  in  the  observed  variation.   For  the  currently  defined
intertidal/subtidal habitat types,  coefficients  of variation were generally
lower in  the protected mixed  fine  category  than in  other  habitats.   These
areas also harbored the largest  mean numbers of individuals.   In the case, of
birds,  it is important not to discount the validity of data simply because of
high  variances.  Migrations of large numbers  of  individuals  over relatively
short time spans is  one of the major features  of shallow water areas.   Data
should be  examined  for patterns which account for the  observed variation.
This  is also true when examining data on the other taxa.

     Since mammal species were not censused using a habitat approach, little
can be said  about  variation in  habitat  usage.  However, habitat  types were
noted at  major hauling out  sites for  pinnipeds.  There  does seem  to be  a
clear preference for  rocky islands  or  gravel beaches  as  haul-out areas,  but
this   trend  may  relate  more  to factors  of  disturbance  and proximity  to
abundant  prey  than to  substrate  preference.  As  with  birds,  total counts of
some  mammal species varies widely with time due to their migratory habits.

IV. A.  3. e. (4)  Observed variation within and between habitat types.

     Rock/cobble habitat;   Numbers of benthic  species  showed a decrease by a
factor of  10 from the -10 m depth to  the +6'  level for  all  the sites.  Wet
weights  of  plants  and  animals at these  sites were on  the order  of  100 to
1000  g/m   at the +3'  and  0'  levels, and  on the order  of  10  g/m   at the  +6'
level.    Macroalgae  and barnacles predominated  in terms  of  biomass at  the
rock-cobble sites except for Partridge Point.  This site had very low numbers
of barnacles.   Cherry Point,  another cobble  site,  consistently had enormous
numbers  of  barnacles.  This  difference  was probably  due to  differences in
grain-size profile.   The  relatively small,  uniform cobbles  at  Cherry  Point
may be   too  unstable  for macroalgae  or  may  not provide   suitable  stable
crevices   for barnacle-eating  predators  to lurk  in  during  low  tide.   The
subtidal  substrate at this site grades to mixed fine sediment rather quickly;
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while at Partridge Point, the subtidal substrate is similar to the intertidal
cobble substrate.

     Fish  species  richness   in  rock  and  cobble  habitats  increased  with
increasing  substrate  stability.    Tidepools   in  rock  outcrops  generally
supported more species than did tidepools in cobble  beaches.   Variability in
net  samples  was  rather  high, but  rank  order and frequency  of  fish species
were relatively consistent.

     Dominant  bird  species  in  rock-cobble  habitats  included  both  those
species which are fairly habitat-specific and those  that  are  not.   The Black
Oystercatcher and the Harlequin Duck were consistently present in low numbers
in rock habitats.  The CV for these species is quite high,  which  is probably
a result  of  difficulty of detection as  well  as  patchy use of habitat.  Surf
Scoters and Glaucous-winged  Gulls  were widespread in  other habitat types in
addition  to  the  rock-cobble  areas.  These  species  used the  areas both for
roosting and for occasional feeding.  The variation in abundance might relate
both  to  patchy  use   of  the habitat  and  to cyclic  activity patterns  not
accounted for in the sampling design.  For example,  the  presence  of offshore
tide  rips  nearby  may  make some  rocky  outcrops  or  cobble beaches  more
attractive  as   roosting  sites  than  other  areas which superficially  look
identical.

     Exposed unconsolidated  habitat;  Two main patterns of  benthic species
richness, biomass,  and  density  with elevation  were observed at  the exposed
unconsolidated  sites  in the  study area.  Where the  subtidal substrate was
relatively  stable  cobble,  as at   Ebey's  Landing and Guemes  Island South,
biomass  and  abundance were  usually higher  below +0'  than above.   However,
during  some  seasons,  even  the  intertidal elevations  had high densities and
biomass,  possibly  due to seasonal growth  of  scavenging or detritivorous
species.  At Ebey's Landing,  amphipods were abundant in  spring and  summer and
at Guemes South   isopods were abundant in summer  to fall.   At other exposed
sites,  the  intertidal zones  had uniformly  low occurrence and  abundance of
benthic species.  The  subtidal  substrate graded  to  mixed sand and pebble in
these  locations.   While  there  was  an  increase  in  species richness  and
abundance at  tidal elevations,  it was  not  nearly  as great  at  sites where
cobbles were  present  in subtidal  zones.   Subtidal cobble habitat in these
exposed locations may  be somewhat  less stable  than  areas with less  sediment
transport.   For  instance,  at Ebey's  Landing  in winter  of  1977-1978,  one
subtidal  elevation was  inundated  by  sand.   The  species  found  there were
closely similar to  those found at  West Beach, a site  on Whidbey  Island which
had sand  in the  subtidal area.

     Exposed sites  were characterized by high variation in fish catches due
to  the  effects  of  capturing  schooling  species.    There  was  substantial
between-year variation in seasonal catches as well.   This  variation could be
due  to  differences  in year  class  success,  but  no  conclusive  evidence is
available.

     Birds  in  exposed  sites were  often  roosting  or  migrating,   but  some
species  possibly  were  also feeding  there,  especially  when  migrating or
schooling  fish  were  present.   The variation  in  mean  abundance  probably
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resulted from both  feeding and migration, as well  as from local weather and
tide  conditions.   As  at  all  areas  in  the  Puget  Sound  region,  migration
resulted in lower  species  ricftness in  the summer  than in other seasons; but
resident breeding  species,  such  as  the ""Glaucous-winged  Gull,  often  were
abundant.  Variation  in  density of the resident species prob'ab-ly depended on
proximity to breeding colonies, but the presence of juveniles in nonbreeding
areas may have negated this effect.

     Protected unconsolidated  habitat;   Protected  sites with unconsolidafed
sediments  showed  substantial  variation  in  benthic  species  richness  and
abundance  with  elevation   and season.   Species   richness  decreassed  most
strongly above the  +3'  to  +5' level in the intertidal zone at all the sites.
This  trend  may not  reflect  actual differences  in  community  organization,
however.  Benthic biomass  was  much lower at  the  +6' elevation than at lower
elevations, unless rock or gravelly substrates were found  at this elevation.
Fidalgo Bay had  rock outcrops in  the high  intertidal zones, which supported
some  algae  and barnacle  growth.   At  Birch  Bay and Dray ton  Harbor,  the +6'
level  had  high  mean biomass  due  to  the  extremely  patchy  occurrence of
eelgrass.  Biomass was generally highly influenced  by the occurrence of large
bivalves.   Density varied between  sites in  unpredictable  ways.   The high
elevations were often dominated by  small  oligochaetes and polychaetes.  Even
at  the  mid-  and  low-intertidal  elevations,  the  sites did not  show very
similar  mean  abundances.    Polychaetes,  oligochaetes,  and  amphipods  were
typically  important  groups,  but  the  abundances  of  these  groups  were not
particularly similar across all protected mixed fine sites.   For example, the
low elevation at  Jamestown and Birch Bay differed in mean count by a factor
of 10, as did the low elevations at Beckett Point and Webb Camp.

     Variability in  fish abundance at  the protected sites  was again largely
due  to  capture of  schooling  species.   Abundance  and  species  richness were
consistently high in these habitats as  compared to  most other areas.

     Dominant bird species showed  relatively  small  variability within seasons
in  the  protected habitats.   Seasonal  variation  is large  due to migrations.
In  the  fall,  winter, and spring,  when seasonally  resident species  were
numerous,  coefficients  of variation were  relatively  low  for  the dominant
species.

     Kammals  using  mudflats as  haul-out areas were less  numerous than  they
were  at other areas.   Some sites,  such as  Padilla Bay,  were consistently
used;  while others,  such  as  Lumni  Bay, were apparently  not.  Disturbance
could have caused some of  these differences,  but this  factor  was not measured
routinely.

IV. A. 3. e. (5)  Summary.

     This  analysis  may  seem to indicate that much of  the baseline data are
unreliable  for  hypothesis  testing.   While this  conclusion may be true for
data  examined  on a yearly basis,  the data  for each season and, for benthos,
data  further  segregated  by specific  elevations are generally less variable.
Dominant species, as  defined by relatively high biomass or numbers, were  also
often less variable in their abundance  than the less abundant species.


                                      79

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     In  assessing the  impact of  some  perturbation  on a  given  location,
careful  attention should  be given  to  defining  the habitat.   Although not
tested experimentally, using  appropriate subsets of  baseline data  as being
representative of sites not  sampled might be fairly  reliable.   However, one
must be  particularly wary  of interpreting  differences  in mean  abundances
without considering the degree of variation about those means.

IV. B.  Nearshore Waters

IV. B.  1.  Habitat  definitions.   The nearshore  water habitats include the
water column  from the high  tide line  offshore  to  the  20  m  (*V*60I)  depth
contour.  This 20 m  depth contour was selected as  the dividing line between
nearshore waters  and  offshore waters (Section  IV.C)  in  part  because several
of the various investigations used this as an outer boundary for their study,
and also  because  observations (of birds,  for  example) very  often indicated
species composition and abundance of biota changed at about the 20 m isobath.
Animals and associations described in the following sections are those within
the water  column itself,  while  those  more   directly  associated with the
intertidal  and  subtidal  substrates  were  discussed  under  the  preceding
section.

     While  the  nearshore water  column  communities  differ among  themselves
less than those of  their various adjacent  intertidal/subtidal communities,
they do not represent one homogeneous  type.   We,  therefore,  differentiated
communities, where data permitted, between nearshore waters over rock/cobble,
protected  unconsolidated  sediments,  and exposed  unconsolidated  substrate
types,  as described in Section IV.A.I.

     Though the  nearshore waters  represent  a  small  fraction  of  the total
water surface area of the study area  (see section IV.B.2, below), their use
as spawning,  nursery, and  feeding  areas  suggests  an importance  inverse in
proportion to their limited area or volume.  It is likely they also provide a
substantial part  of  the  zooplankton which later  inhabit offshore  waters and
support communities there.

IV. B.  2.  Spatial extent.  The extent of the nearshore  area  is estimated in
Table 5.  Much of the shallow water area occurs along  the open shorelines and
adjacent embayments of the Strait of Juan de Fuca, eastern Strait of Georgia,
and in  the bays  of  Whatcom  and  Skagit   counties.   The  narrow shelves along
passages and around islands represent a relatively small part of the total.

IV. B.  3.  Major Biological Assemblages.

IV. B.  3.  a.   Community composition.  This  section deals with the mammals,
birds,  and  fish  using this neritic area and not directly associated with the
bottom.   Most feed exclusively within the water  column.   Many  spend  only a
part of their life cycle or a part of each day in this zone.

     The birds and mammals are primarily fish-eaters, and include a number of
species which feed  on bottom-associated fish  as  well  as  mid-water prey.
Thus, many of these  predators are partly dependent  upon the  productivity of
the shallows.
                                     80

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Table 5.   Extent of nearshore and offshore waters within the study area*
Estimated Area in km^

A. Bays
Discovery Bay
Bays in Whatcom-Skagit Counties
Bays in San Juan Islands
B. Passages
Northern Admiralty Inlet
Bellingham Channel
Haro Strait
Rosario Strait
Northern San Juan Waters
Passages in San Juan Islands
C. Open Waters
Strait of Juan de Fuca
Eastern Strait of Georgia
Western Strait of Georgia

Nearshore
«20 m)

10
155
70

15
5
15
20
5
20
300
140
20
775
(12%)
Offshore
(>20 m)

20
180
30

60
70
550
280
150
130
3,500
420
360
5,750
(88%)
Total

30
335
100

75
75
565
300
155
150
3,800
560
380
6,525

*Boundaries and areas derived from Wahl et al. (1981).
                                      81

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A  relatively abrupt  change in  species  composition,  richness,  and numbers
occurs at about the 20 m depth as exemplified by the birds (Table 6).

    The nearshore  area  is  the principal foraging habitat of the harbor seal,
which  presumably  feeds  in  bays  and  along  shorelines of  all  types.   Those
pinnipeds described previously as hauling out on intertidal rocks and beaches
seek refuge from disturbance and forage for fish in nearshore waters.

      The  only  cetacean  that  can  be  considered nearshore  is  the  harbor
porpoise,  though  they may  occur  in  offshore  water  also.   They  appear  in
nearshore waters most commonly  in spring and  summer.  Other local cetaceans
are capable of  entering the nearshore areas while  transiting  to other areas
or while  foraging or in  pursuit  of  offshore  prey, but  these movements are
unpredictable.  It is reasonable  to  expect that any of  the  cetaceans common
to the  study  area  (gray whale,  minke whale, killer whale, Dall porpoise, and
harbor porpoise) can on occasion be found in the nearshore areas.

    Nearshore  waters also   support  a  large  proportion  of   the fish-eating
marine birds which occur seasonally within the  study area, including a number
of  species  of  loons,  grebes,   cormorants,  mergansers,  gulls,  and  alcids.
Appendix  Tables III-I  to   III-P  list  the  most  frequently  occurring  bird
species  seasonally  within  the  eight  nearshore  habitats.   Allowing  for
seasonal differences, these lists are remarkably  similar.   Twelve of  the 21
species  occurred  (as  one   of  the  10  seasonally most-frequently observed
species) in all eight habitats,  and  five more species  occurred  in at least
six habitats.   These species are all  either  obligate  fish-eaters  (loons,
grebes, cormorants,  mergansers,  Common Tern, and  nearshore  alcids) or gulls
which  eat  many   things   including   fish.   While  other  species  occurred
seasonally within these water-column habitats,  numbers were relatively small.
Most of the  obligate fish-eaters in  the nearshore  group  occurred  almost
strictly within the  nearshore waters.  Mergansers, for  example,  seldom were
observed feeding in water of greater than 20 m  depth.

    The most  common birds  varied seasonally  at  exposed  habitats and  from
place  to  place,  though the gulls were always abundant.   In  the protected
habitats grebes were abundant  in  nearshore  waters over  mud-gravel habitats
and Pigeon Guillemots  occurred  consistently   at  mud-sand  habitats.   Large
numbers of Double-crested Cormorants  at protected  mud  habitats reflected the
observations of many of  these birds commuting daily to forage in the shallows
of  Padilla,   Samish,   and  Fidalgo   Bays.    Marbled   Murrelets  occurred
consistently in low densities at exposed rock;  Pigeon Guillemots in large
numbers foragad off exposed rocks in the summer.   Protected  rock habitat was
important  to Pigeon Guillemots  and  Marbled  Murrelets  year-round,  Common
Murres  in the fall, and  Pelagic  Cormorants in the summer.

    Birds  found in  these   nearshore  habitats  showed  greater  mobility than
bottom- or benthic-feeding  species which foraged  on shellfish or eelgrass,
for example, and which  normally  show relatively stable seasonal distribution
patterns.   On the  other hand, the neritic fish-eaters  appear  to  show more
consistent patterns  of  distribution  than their counterparts  in the offshore
waters  (Section IV.C).
                                     82

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Table 6.  Predominant distribution of commonly occurring bird species
          feeding within nearshore and offshore water columns (maximum
          seasonal densities from Appendix Tables III-I thru III-P)
             Nearshore
              «20 m)
  Offshore
  O20 m)
          Common Loon
          Red-throated Loon
Arctic Loon
          Red-necked Grebe
          Horned Grebe
Western Grebe
          Double-crested Cormorant
          Pelagic Cormorant
Brandt's Cormorant
                                                              1
          Red-breasted Merganser
          Glaucous-winged Gull
          California Gull
          Mew Gull
          Bonaparte's Gull
          Heermann's Gull
          Pigeon Guillemot
          Marbled Murrelet
          Rhinoceros Auklet 3
 Common Murre
 Ancient Murrelet'
 Tufted Puffin I
1 Did not occur  (as  one  of  10  most-frequently occurring species)  in
 nearshore habitats.

2 Did not occur  in offshore habitats.

^ Highest nearshore  densities  due to feeding flocks along shorelines
 adjacent to  offshore area—often more widespread offshore.
                                      83

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     Both the MESA  and  WDOE nearshore (tow nets)  fish  sampling schemes were
patterned on the intertidal habitat classification; i.e., sampling sites were
at  the various  exposed,  protected, unconsolidated,  and rock  substrates  as
observed at  low tide.   The original  idea was  to  investigate whether  the
nearshore pelagic  fish  assemblage  reflected  a dependency on  the intertidal
habitat  communities.   However,  in both  the  Strait of Juan de  Fuca  and
northern Puget  Sound,  no  strong correlation was  found between  the  defined
intertidal  habitats and   the  composition  of  the  nearshore  pelagic  fish
community.   Consequently,  the  decision to consider the  nearshore water as a
single distinct habitat  appears appropriate and useful in the case of fishes.

     Although the method  of sampling neritic fishes  was highly variable, the
general results were quite consistent for both the Strait of Juan de Fuca and
northern Puget  Sound (Table 7).   Pacific herring larvae and  juveniles were
the single most important species in terms of  percent occurrence,  abundance,
and  biomass.    Other important  neritic  species   (but  clearly of  secondary
importance to  herring)  were surf  smelt  (all  life history  stages);  longfin
smelt  (juvenile  and adults);  Pacific  sand lance  (all  life  history stages);
juvenile chum, pink, coho, and chinook salmon;  juvenile tomcod  and  walleye
pollock; and  tadpole sculpin  (all  life history  stages).   The  one  obvious
difference between  northern Puget  Sound and the Strait of  Juan de Fuca was
the  absence  of  three-spine  sticklebacks  from the  Strait samples.   Those
species  (except  herring)  that often  ranked  highly in percent  occurrence
usually  ranked  highly  in  abundance  also, but low  in biomass  (e.g., surf
smelt).  Conversely,  some  species  such  as spiny  dogfish  ranked  second  or
third  in biomass but relatively low  in  occurrence  and abundance.   Some 29
species from the Strait were included  in this ranking  scheme,  while  only 17
were included for the northern area.

     Although there was no  association  with  specific   intertidal  habitats,
longfin  smelt,  and threespine  stickleback  were  most  abundant in areas  of
freshwater  inflow  which  presumably  were  also  spawning  sites  for  these
freshwater spawning species.   Of course,  salmon are  also freshwater spawners
and when they first come out of the rivers and streams  to the saltwater, they
are concentrated  in those areas;  but since  they migrate  to  the open ocean
there are juvenile  salmon throughout  northern Puget  Sound  and the  Strait of
Juan de  Fuca.  In  addition,  the studies of nearshore  fishes  indicated that
protected embayment areas  harbored larger quantities of these  fishes which
stayed longer through the year (i.e., they appeared  sooner in the spring and
left later in the fall).

     Pronounced  seasonal  changes  were evident  from all data  collected on
nearshore  species   (species  composition,  abundance,   biomass,  and  length
frequency).   By  winter  almost the entire neritic fish assemblage had moved
away from the  shoreline,  presumably to deeper water, except in  the  case of
salmon, at least  some of which may have  made  it to  the open ocean.  Pacific
herring larvae predominated in spring, herring juveniles predominated in the
summer, but by fall herring juveniles had left the nearshore waters.

     In summary,  although  the diversity  of  fish  species  in  the  nearshore
habitats was low, the habitats appeared to be critically important as nursery
                                     84

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        Table 7.   The 10 most common nerltlc fishes of northern Puget Sound and the Strait of Juan de Fuca

                  ranked according to occurrence, abundance,  and biomass,  1974-1979.
CO
en
Occurrence
Northern Puget Sound
Species
Pacific herring
Threespine stickleback
Pacific sand larice
Surf smelt
Pacific staghorn sculpin
Chinook salmon
Tadpole sculpin
Longfin smelt
Chum salmon
Soft sculpin
Shiner perch
Pacific tomcod
Spiny dogfish
Starry flounder
Coho salmon
Northern anchovy
Snake prickleback

1974-1975
1
2
3
4
5
6
7
8
9
10








1975-1976
1
2
3
4
6
7
10
5






9
8

Abundance

1974-1975
1
2
3
5
7
10
4
9


6
8






1975-1976
1
3
2
5

9
7
4


10
8




6
Biomass

1974-1975
1
3
8
9
5
7




6

2
4
10



1975-1976
1
8
3

5
6

7




2
4
9
10

        Continued

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        Table 7.  (Contd.)
CO
cr>
Occurrence
Strait of Juan de Fuca
Species
Pacific herring
Surf smelt
Tadpole sculpin
Crescent gunnel
Pacific sand lance
Walleye pollock
Long fin smelt
Tubesnout
English sole
Shiner perch
Pink salmon
Northern anchovy
Manacled sculpin
Pacific tomcod
Spiny dogfish
Starry flounder
Coho salmon
Pile perch
Striped perch
Chinook salmon
Pacific staghorn sculpin
Wolf eel
Kelp greenling
Threespine stickleback
Sailfln sculpin
Widow rockfish
Chum salmon
Bay pipefish
Pacific sandfish
76-77
1
2
3
4
5.5
5.5
7
8
9
11.5
11.5
11.5
11.5



77-78
1
5
3.5
11
2
5.5
5.5
7.5
7.5
3.5
11
11
9-

78-79
1
3
5
5.5
2
5.5
4
9
9
6.5
9
6.5
Abundance
76-77
1
5
7
8
4
2
9
10
3
6



77-78
1
4
9
10
3
8
2
5
7
6
9.5


78-79
1
3
5
2
6
8.5
4
9.5


7
8.5
76-77
1
9
4
2
7
3
5
6
8
10


Biomass
77-78
1
7
5
2
6
4
10.5
3
8
9
10.5


78-79
1
5
8
2
4
10
3
7
6
9

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areas  for  some  economically and  ecologically very  important  fishes—i.e.,
salmon, herring, smelt, sand lance, and cod fishes.

IV.  B.  3.  b.   Trophic  organization.   The  problems concerning  a  lack  of
trophic structure data as outlined above for the intertidal/subtidal habitats
also apply to the nearshore habitats.  Very little is known of energy flow in
nearshore habitats.   Some information  exists for adjacent  habitats in  the
southern Strait  of  Georgia and the Puget  Sound  central  basin.   For example,
Parsons et al. (1969a and b) provided phytoplankton information for the water
masses under the Fraser River plume in the Strait of Georgia between February
and May 1967.  It was used to approximate  the  nearshore  situation because of
the mixing and nutrient characteristics.   Complementary data on chlorophyll _a
in that region were also surveyed  (Stephens, 1968) and transformed to a total
organic weight value by a C/Chl £  ratio of 30  (Strickland, 1960) and a carbon
proportion of  50% of  total weight.  These  values were  also  compared  with
Parsons et al. (1970) and Stockner et al.  (1979) in their summary of plankton
production in  that  region.   Offshore  standing stock  of phytoplankton  was
estimated from  Chester et  al.  (1980)  and Mackas et al.  (1980)  in the same
manner for chlorophyll a^ measurements in the middle of the Strait of Juan de
Fuca.

     Herbivorous (suspension-feeding) and  carnivorous zooplankton of offshore
and nearshore neritic  habitats have also  been poorly documented.  Similar to
the primary production estimates,  data on  zooplankton within the Fraser River
plume  (Parsons et al., 1969a, 1970) were used  as an estimate of the nearshore
standing  stock   and  data  from the  center of the  Strait  of  Juan  de  Fuca
(Chester  et  al., 1980; Mackas  et al.,   1980) were used,  in  conjunction with
data  from selected  stations  in   the  southern  Strait  of Georgia  (Robinson
et al.,  1968a and  b; Barraclough  and Fulton,  1967, 1968; Barraclough et al.,
1968;  Barraclough,   1967a and  b;  Robinson,  1969)  to   estimate  zooplankton
standing stock for offshore habitats.

     The trophic organization of  the  nearshore zones  did  not appear  to be
habitat-specific. All the organisms were swimmning or floating.  The majority
were highly  mobile  and were not  closely  associated  with underlying benthic
habitat  types.   Therefore,  the following discussion applies broadly to all
nearshore  areas; and  because  much of  the  data  were  available  only  from
offshore  (>20 m)  waters,  it  also  applies   somewhat  to  offshore habitats
discussed in further detail  in  Section  IV.C. below.

     The food web  structure characterizing the  neritic  zone adjacent to the
shore  (Figure 23) was  basically a condensed  version  of the offshore habitat
group.   Nearshora  habitats  supported  biological communities similarly based
upon  phytoplankton  production, suspension-feeding  hervivorous  zooplankton,
carnivorous  zooplankton,  planktivorous  fishes  and  birds,  and piscivorous
fish,  birds,  and marine mammals.   Production, at  least  in terms of  standing
stock, appeared  to be measurably higher  than  in  offshore  waters.

     The taxa dominating  these  food  web nodes also tended to be the same as
those  offshore  but  with some  exceptions.  Deep  water  herbivorous  calanoid
copepods  (i.e.,  Calanus) which were important  offshore did not  appear in
equal  density   nearshore.    Epibenthic  forms,  such  as omnivorous mysids,
                                      87

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entered   the   community  from   the   adjacent  epibenthic   communities  and
contributed to  the  diet of neritic  zooplanktivorous fishes.  The  schooling
neritic  fishes, particularly Pacific  herring and  Pacific sand  lance,  also
were more common in these habitats and, consequently,  constituted major prey
resources for  the piscivorous  fishes and birds in  the community.  As in the
offshore  habitats,  loons  and grebes,  particularly  the Western Grebe  and
Arctic Loon,  were the  dominant  piscivores;  but the  Common Murre also often
comprised  a large  proportion of  the  total  standing  stock of  piscivorous
birds.

     The  role  of  piscivorous  marine  mammals  in  energy  flow  is  poorly
understood  and  has  not  been quantified in the area.  Killer whales, however,
have  been  known  to consume  pinnipeds,  flatfish,  cod  fishes,   salmon,  and
squid.   Harbor porpoise  apparently  eat  schooling  fishes,  such  as herring.
Harbor seals  are known  to  consume  a  wide variety  of  fish,  including  cod
fishes,  osmerids,  and  sea  perch.    They occasionally eat  octopus  also.
Whiting (hake) and various bottomfishes apparently are important prey for sea
lions.

     Although structurally  similar to  the offshore food web,  the  nearshore
food web supports a higher standing stock of organisms at most trophic levels
and  may  reflect  actual  differences  in  production considering  that  the
functional  groups  are  essentially  the  same  as  in  the offshore  food web.
There  are a number  of  possible explanations  for  this  apparent  difference.
First,  unlike  in   the  offshore  habitats,  surf ace-to-bottom  mixing  and
estuarine plumes  are typical of the nearshore  habitats, especially  in the
vicinity of headlands (Pingree et al., 1978) which are common features of the
region's shoreline.  Second, adjacent shorelands and  rivers provide immediate
sources  of  nutrients   which  are  mixed  into the  nearshore neritic  water.
Third,  spawning  populations  of   animals  with   pelagic   larvae,  whether
nearshore,  shallow subtidal  or  intertidal,  release  their  progeny directly
into the  nearshore  water column.  A certain  proportion of these migrate or
are  transported into  offshore  habitats;  but  the  majority appear  to feed,
grow, and develop  in the nearshore habitats where  they  form  important prey
and  predator populations  during that  time.   Two  examples of  such animals
include the Pacific herring and Dungeness crab.   Pacific herring spawn their
demersal  eggs  in shallow  subtidal  habitats.   Upon hatching the larvae soon
begin  schooling in neritic  waters  and  typically  aggregate  in  contained
embayments through much of their larval and early juvenile life;  during these
stages they form high density congregations that  feed upon small herbivorous
copepods.   They are,  in turn, fed upon heavily by neritic fish-eating fishes
and nearshore  birds.  During  this period  (April-July),  the role of Pacific
herring in  the  nearshore food web is pervasive.

     Dungeness  crab also release their pelagic  larvae into nearshore waters,
especially  in  contained embayments  and estuaries, where  they develop through
the various larval stages.  As zoea they are fed upon extensively by juvenile
salmonids  and  other neritic  zooplankton-eating  fishes and  are  themselves
carnivorous upon smaller zooplankton.  In both cases,  it would  appear that  a
highly  advantageous  life  history  strategy  is  to  release  progeny  into
nearshore waters where primary and secondary production  is measurably greater
and less heterogeneously distributed than in offshore habitats.

-------
                PISCIVOROUS
                MARINE
                MAMMALS
              NEARSHORE
        PISCIVOROUS
        FISHES
                                           O 0,1-1
                                           o < i
PISCIVOROUS
BIRDS
                ZOOPLANKTIVOROUS
                FISHES
                (0.23)
         CARNIVOROUS
         ZOOPLANKTON
                ZOOPLANKTIVOROUS
                BIRDS
                                         OMNIVOROUS
                                         ZOOPLANKTON
                    HERBIVOROUS
                    ZOOPLANKTON
                    «0,20)
                     PHYTOPLANKTON
                     «0,4)
Figure 13.  Characterization of nearshore habitat food web.  Average biomass
          of major taxa represented in parentneses(.grams/m2 or grams/m2).
                               89

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IV. B. 3. c.  Density, biomass, species richness.  The emphasis in the marine
mammal studies was on the  most observable species  that  could be quantified.
Thus, primarily  the  hauled-out pinnipeds were counted.   Equivalent  data for
nearshore areas are not available.

     Seasonal  densities  of  birds  assumed  to be  associated with the water
column (i.e., fish- and plankton-eating species,  as opposed  to those feeding
on  bottom  organisms) are  given  in  Appendix Tables  III-I  through  III-P,
listing  the seasonally  most  common  species  which may  be  defined  as  the
predominent species.

     For all eight habitats,  average densities ranged from  about 13  to 396
birds/km2 for  all  species  during  the year.   If gulls, which also  forage on
intertidal/subtidal  habitats,  were removed,  this  range  becomes  about  2  to
102/km2.  These  ranges compare with  equivalent densities  for corresponding
intertidal/subtidal habitat types  of  8 to 1280/km2 for all  species  and  1 to
1142/km2 for  species other  than  gulls   (Appendix  Tables III-A  through H).
Densities of  intertidal/subtidal  and  nearshore  water   habitats  were  more
similar  in  the  relatively  low-density  exposed  unconsolidated  and  rock
habitats  and  generally  differed  more  in high-density   protected  habitats.
This situation was most evident in the fall,  winter, and  spring seasons,  when
large  populations  of  waterfowl  resulted in protected  intertidal/subtidal
densities up  to  20  times  greater  than  those in  adjacent  nearshore waters.
Densities were more  nearly  equal  in exposed  habitats where  large numbers of
fish-eating species  were present  in nearshore waters and subtidal/intertidal
habitats had low numbers of bottom-feeding or grazing  birds.  The particular
exception to this was cobble habitats where herring spawned.  Scoters feeding
on spawn in the intertidal/subtidal habitat resulted in densities of 10 to 20
times those of the nearshore waters.

     Summations  of  total  species  richness,   density,  and  biomass  for  each
season are  shown in  Appendix Tables III-Q through  III-T.  During the spring,
most bird groups were very similar; exposed sand and rock were lowest for all
three  parameters.    Exposed mixed coarse  and  protected  rock  had  highest
densities and biomass in summer.  Exposed rock was  clearly  lowest in density
and  biomass  in  the fall.   Protected  rock  and  protected  mud-gravel  were
highest in density and biomass in winter.

     Fish species  richness  for tow  net catches  in  nearshore zones  of the
study area  were surprisingly  similar from  site to site (Figure 24).  Mean
species  richness  ranged from  2.7  at  Deadman Bay to 9.8  at  Lummi Bay.  Most
mean values were  in  the 4- to  6-species range.   The mean  of  the means for
rocky, exposed, and protected habitats were 6.3, 5.7, and 7.4, respectively.

     The maximum number of  species occurred  in the spring  at most sites, or
in summer at some sites, followed by a reduction in the fall  and a minimum in
winter.  High  values in the spring and  summer reflect the  influx  of larvae
and juveniles  into nearshore surface waters.  Sites sampled in the San Juan
Islands  had  the fewest  species  relative  to  the other   regions  sampled.
Samples  collected  at the  eastern Strait sites  were  often more species-rich
than those in  the more exposed western Strait sites.
                                      90

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-------
     Mean fish densities in tow  net  catches  varied between less than 0.01 to
0.52 fish/m  among the 24 sites that were sampled  (Figure 25).  Mean of means
for rocky, exposed, and protected habitats were 0.13, 0.05, and 0.06 fish/m ,
respectively.  The higher value for  the  rocky  habitat  reflects  the  large
catches made at Morse  Creek,  a  cobble site.   The mean of means for the sites
in  the  San Juan  Islands,  Cherry Point/Lummi  Bay area, Anacortes  area,  and
Strait of Juan de Fuca were 0.09, 0.10, 0.03, and  0.15, respectively.  Again,
high values  at Morse  Creek  influenced  the  high  mean  densities  (due  to an
unusually large catch of juvenile Pacific herring  in the summer of 1977).

     Seasonal  density  trends  generally  followed  those of  species  richness;
maxima often occurred  in the  spring  and  minima in the winter.  The schooling
tendencies and patchy  distribution  of the species (Pacific  herring, smelts,
sand lance,  etc.)  most often  caught  in  tow  nets  resulted  in highly variable
catch statistics,  especially  densities and biomass.  Trends  were difficult to
define very clearly.

     Mean fish biomass for tow net samples  (Figure 26)  ranged from less than
0.01  to  1.04  g/m ; the  unusually  high value  at  Morse  Creek  reflected  a
uniquely massive  catch in  the summer of 1977.   Disregarding  the  Morse Creek
summer  1977  sample,  the  range was 0.01  to  0.69.  The mean of  the  means for
rocky, exposed, and  protected habitats was 0.08,  1.10, and  0.25  g/m ,  again
disregarding the  Morse Creek summer  1977  sample.   Mean biomass  values were
highest  in  the Cherry Point/Lummi  Bay  area;  while  those  for the  San Juan
Islands, Anacortes  area,  and  Strait  of Juan de  Fuca were  slighly lower, but
similar to each other.

     Mean biomass was often greatest in summer catches, lowest in the winter.
Some tendency  toward highest  biomass  in  protected habitats was apparent, but
this trend was not consistent as reflected  by low biomass at Jamestown/Port
Williams and Guemes  Island East. Many of the lowest  values  occurred  at the
exposed sites.  High variability in biomass  data usually was a result of the
occasional capture of large species such as spiny  dogfish, various sea perch,
flounder, and  sculpin.  The  extremely high value for summer  1977  at  Morse
Creek  reflects the  capture   of   120,000  juvenile  Pacific herring  weighing
300 kg.

IV.  B.  3.  d.   Migrants.   In describing  typical  movements in  and out  of
nearshore  waters,  the  term  migrant   may  be  somewhat  misleading   since  it
usually  implies  movements over   long  distances.   In  the  nearshore waters,
movements  of  animals  in  and out  of  this  habitat may  actually   be  quite
restricted and involve animals moving into  the water  column during certain
times  of  the  day or  season.   A discussion of  larger scale  migrations  as
observed through offshore waters is  described in Section IV.C.3.d. below.

     Migratory marine  mammals are generally not  important  components  of the
nearshore communities.  During  their  northward migration, a  few  gray whales
have been observed in the inside waters,  often pausing to feed.  This feeding
activity  usually  takes  place   in   the  nearshore  habitats,   normally  in
mud-gravel  areas   and  mud-sand  areas.  Typical   feeding  behavior   for this
species includes passing over the bottom on its side and scooping and sifting
sediment  through  baleen  plates to recover benthic organisms.  Killer whales
                                      92

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-------
may  occasionally   frequent  nearshore  areas  utilized   by  harbor  seals.
Presumably killer whales entering these areas forage upon pinnipeds and fish.

     Both California and northern sea lions, which are migrants, pass through
nearshore areas as they enter a haul-out area, but they are not considered to
be  important  components  of  the  nearshore  community.   They  are  primarily
offshore and deep-water feeders.

     Seabirds in  the  nearshore area exhibited movements that were similar to
those found in offshore  waters.   Major movements of birds  took place to and
from inland  nesting  sites  (occupied in the  spring  and summer) to wintering
areas in  the nearshore  bays   (e.g., Western Grebes).   Other  loons, grebes,
cormorants, alcids, and  mergansers also followed this pattern.  Large flocks
of gulls  passed  through the nearshore  waters during migration seasons;  and
two species, Mew and Thayer's Gulls, were important nearshore residents.

     Smaller  scale movements  of  locally  nesting  birds,  like the  Common
Merganser,  to  saltwater and  the dispersal  of  species, like the cormorants,
Pigeon Guillemots and Marbled Murrelets, to  and  from breeding areas occurred
throughout the nearshore regions.  Movements of the latter  species were from
breeding areas nearshore to foraging areas, often offshore.  Glaucous-winged
Gulls,  the most  abundant  gull in the  study  area,  also dispersed from areas
around colonies to nearshore wintering habitats  in August-September.  Adults
began to  return  to  nesting colonies  and  establish territories as early as
January or February, though most juveniles  remained  away  from the colony all
year.

     Based on  density information from Appendix Tables III-I through III-P,
the greatest  densities  of birds were  observed in  the spring and fall with
fewer large  densities recorded  in  the winter and  summer.   These  data nay
demonstrate  a  seasonal  influx  into  the  nearshore areas  following summer
breeding  seasons  (for the fall)  and again  just prior  to  the  onset  of a new
breeding  period  in the  spring.  Many  species found  in  the nearshore areas
during  these  periods  would be expected to  be in  transit either  to or from
inland areas.

     Generally,  many  species  of fish  demonstrate  the yearly  (or  seasonal)
spawning  migrations into  the  nearshore habitat.   Some spawning activity may
be occurring at  virtually  every season of  the  year.   Many other species, on
the  other hand,  make much smaller  scale  (local) movements on a seasonal or
diel basis.  Seasonal movement usually consists  primarily of species  leaving
the nearshore area  for the deeper waters during  the winter when conditions in
that  habitat are  the poorest.   Dogfish,  ratfish,  and  some cod  fishes and
rockfish move from  deeper,  offshore  waters  into  the  nearshore waters  at night
for foraging purposes.

     Juvenile  salmon  usually move through  the  nearshora  habitats as wall as
offshore waters  as  they  migrate to  sea  in  the  winter  and spring.  Adults of
these  species move  into  the  study  area through  tha  offshore waters in the
summer  and fall.
                                       95

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     Adult herring usually move from offshore waters into the nearshore areas
for  spawning  purposes from December  through June;  the timing  is  dependent
upon  the  location  of  the  spawning  grounds.    Juvenile   herring  remain
associated with  these nearshore waters  until the  late fall when  they move
into deeper water.

     Surf  smelt  swim  into  nearshore  waters   for spawning.   Spawning  on
intertidal beaches can occur  during  any  month but  is  usually site  specific.
Other than the  fact  that movements into  nearshore waters for spawning occur,
as with longfin smelt which spawn in streams, the extent or  duration of surf
smelt movements is unknown.

     Cod fishes usually move into nearshore waters during spawning migrations
in  the  winter months  and  become dispersed  offshore during  the  rest of the
year.  Juvenile cod,  however,  often  remain in the  nearshore  area until they
are one year old before moving out into deeper waters.

IV.  3.   B.  e.   Variability.   The  nearshore water was  perhaps  the  most
consistently monitored  area  (for  fish,  birds, and  mammals)  during the MESA
program.  Thus,  one  expects  that  any natural  variability  would  have  been
adequately documented.   However,  the difficulties  of  sampling far-ranging
study sites using a variety of  methods has generated some uncertainty as to
the adequacy of  the  data.   Some variability in biologic data observed in the
nearshore zones may be entirely related to methodology.

     Harbor seals were  the dominant  mammals of nearshore waters, though many
other species were also observed.  Censusing methods concentrated on haul-out
areas, thus data for nearshore and offshore waters are minimal.   Difficulties
in observing mammals which haul out are magnified when the animals are in the
water.  Glare, waves, wide dispersal and submergence of the animals, distur-
bance by aircraft,  and formation  of pods  are  factors directly  affecting
estimates of population sizes.

     Generally,  recent  collection of  data on marine  mammals  in  the study
area, while  providing a basic  inventory, are  not  of  the quality  to detect
subtle variations.

     While there  was considerable variation in  bird  species composition in
the intertidal/subtidal habitat types, there was remarkable similarity in the
species  foraging  in  nearshore waters overlying  the various  substrate types.
The seasonal lists of the  most frequently observed species  (Appendix Tables
III-I  through  III-P) were   comprised  of  a  relatively few species,  each
occurring in a number of nearshore habitats.

     The  sources   of  variability  in   bird  data  included  site-specific
short-term phenomena, such as herring spawning and tidal turbulence, observer
vision,  glare,. waves, and other weather-related  factors,  disturbance caused
by  the  censusing  vehicle (boat or plane), taxonomic ability, submergence of
diving  birds,   and  diurnal  movement  patterns  of  some species.   "Normal"
seasonal  variations   related   to  migrations,  breeding,  nesting,  etc.  add
further  sources   of  variability.   The  two-year study   period   provided
insufficient data for documenting annual variations  in bird populations using
                                       96

-------
nearshore waters.  Substantial variations  are probable.   These relate to the
success of the previous breeding  season  and to variations in productivity of
the marine systems.

     A major source of sampling error for nearshore fishes was likely related
to gear  selectivity.   Each gear  type used would  tend  to selectively sample
any given  area and direct  comparison of  catches  "from  different  gear types
could be  misleading.   However,  in most cases data from  similar  gear types
were  comparable.   Other  uncontrollable  variation was  a  result   of  bottom
topography, weather conditions, sea conditions, etc.

     A decrease  in total number  of  fish  species  collected was  observed in
beach seine  catches  as the MESA  study progressed,  due  largely to an unusual
appearance  of rare  species  in   the  first  year's catch.   The presence or
absence  of  these  locally  rare  species  (rock greenling,  Pacific sandfish,
plainfin midshipman, and kelp perch) was not  considered  significant.

     The rank  order  of the most  abundant  species caught  in tow net samples
was generally  consistent  from year  to  year  (Table 7)  and suggests that for
some  species  habitat  occupation  is fairly  constant.   Differences  between
years may be a result  of  the  random occurrence of unusually large numbers of
individuals of a species.  Variation  in age  class abundance  could  also affect
the rankings.  For example, few speckled sanddabs were collected early in the
MESA study; abundance of this species increased markedly during later years.

     Pacific  herring  and other  schooling  fish  often dominated the  tow net
catches.   Pacific  herring  are most  abundant  in  the  spring  and  summer as
larvae and juveniles.  Few herring were caught in the fall and winter as  this
species  moved into  the  offshore  waters.   A difficulty  in  assessing  the
habitat  preference of  herring was  encountered  and was attributed  to  the
schooling nature and,  thus, patchy distribution of this species.  Most smelt
were collected in  the  western Strait of Juan de Fuca  in the summer and  fall
months  corresponding   to  spawning  activities   in   the  nearshore  areas.
Between-year and between-season  variability  in tow net  catches (as shown in
the  Strait  data  in Figures  27,  28,  29)  often  resulted  from  influxes of
schooling  fish,  such  as  the  clupeids and  osmerids.   While species richness
remained fairly  constant,  abundance  and biomass  occasionally varied widely.
For example,  the summer 1977  sample at Morse Creek was highly unusual for a
site that normally had low-density, low-biomass catches.

     Species richness of nearshore  fishes was greatest during summer and  fall
and diminished in the winter and  spring.  This trend may generally reflect an
influx of  larvae and  juveniles  into nearshore waters  during  these seasons.
Densities of fishes caught followed a similar pattern.

IV. C.  Offshore Waters

IV. C.  1.    Habitat  definitions.   Offshore  areas  with  water depths  of  20 m
(60f) or greater comprised  a  set  of habitats which differed in many respects
from  the  shallower areas.  These areas were characterized as parts  of  the
MESA plankton, bird, and mammal studies.
                                       97

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Figure 27.  Number of species of fish caught per season(winter/sprinq/suiiitiicr/fa11)
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-------



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-------
    These  deep water  areas  have been  classified here as  three  types:   the
deeper  portions of several  embayments in  the  study area;  passages;  and the
extensive  open water areas of  large bodies like  the  Strait of Juan de Fuca.
Note that  these habitat types are not "pelagic"  in the oceanic sense, though
processes may  be similar in many respects.

IV. C.  1.  a.   Bays.   Several embayments in the  study area have deep offshore
areas  that showed  pronounced  species  differences  from immediately adjacent
nearshore  waters.   Discovery  Bay  and  Bellingham  Bay had  sizable offshore
components.   Padilla Bay was  largely composed of shallow eelgrass beds; but
its  outer  portion  was  deep  and,  like  Discovery  and Bellingham  Bays,  the
marine  bird  species  composition  changed  abruptly at  about  the  20 m depth
contour.

IV.  C.  1.  b.   Narrow passages.  Deep narrow passages between land masses in
the  study  area featured  strong tidal  currents  and  turbulence  along tidal
fronts.   Areas  such  as Speiden and  San Juan Cnannels  were included in this
habitat  type.   Areas of extremely  strong  tidal exchange  like  southern San
Juan  Channel near" Cattle Point and Active  Pass  in Canadian waters were also
included.   Tidal fronts were more  common in passages than  in deep bays or
open waters.

IV.  C.  1.  c.    Open  waters and broad passages.   A large  proportion of the
offshore waters were within the Strait of  Juan de Fuca and  southern Strait of
Georgia.   These contained very deep, open waters;  and  while tidal  fronts were
noticeable,  they often  had  lower current  velocity and less  tidal  turbulence
than  narrow  passages.   We  have  included  Haro  Strait,   Rosario   Strait,
Admiralty  Inlet, and Bellingham and  Presidents  Channels in  the broad  passage
habitat  type.

IV.  C.  2.   Spatial extent.  About  88% of the water surface  in the  study area
covers  depths greater than 20 m (Table 5).  About 4%  of these offshore waters
are    components    of   large    bays    like    Discovery    Bay    and   the
Bellingham-Samish-Padilla Bays  complex  and small  bays within the San Juan
Islands.   The  deep  passages make up  about 21%.   The  Strait of Juan  de Fuca
waters  comprise about 61% of the total deep waters of  the  study area,  and the
study area portion of the southern Strait  of Georgia  makes  up 14%.

     The  offshore waters  include a very  high proportion  of the  total water
volume  of  the  study area.  Assuming  average  nearshore  depth as 10 m, and
average offshore depth as  100 m,  about 99% of  the volume  of the Strait of
Juan de Fuca would be in the offshore waterf;.

IV.  C.  3.   Major Biological Assemblages

IV.  C.  3.  a.   Community  description.   The four  offshore habitats  resemble
each other  in a number of  ways; and  some of  the variation  between  habitat
types probably represents  conditions  at  arbitrarily selected points  on  a
scale grading from narrow,  turbulent passages like San Juan Channel at Cattle
Point  to apparently  featureless waters  in the middle  of  the Strait  of Juan
de Fuca.
                                      101

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     One of  the most  characteristic  features of  the offshore  community as
presented here is that some  of  the predominant and most  visible species are
usually  not  directly  associated  with the  bottom community.  These  species
function primarily at the surface and in upper and middle levels  of the water
column.  Plankton and  fish  along with the marine birds and mammals which, in
turn, prey mostly on plankton and fish, comprise the community.

     Animals  usually appear  to have  a  "patchy" or  "clumped" distribution,
presumably reflecting concentrations of their  prey  items.   Major proportions
of marine bird  populations  observed in the offshore  waters were in areas of
fronts between water masses:   tide rips, convergence  and  downwelling  zones,
etc.

     Thus,  the  discussion  below  will  focus  on  interspecific,  primarily
feeding, relationships and  on important phenomena such as  the tidal  fronts.
We  stress,   again,   that  few  data  are  available  for  offshore  mid-water
organisms and even less is known of offshore bottom waters.

     At least 21 species of marine mammals have been reported in the offshore
waters  of  the study area.   They primarily use  these  waters  for feeding and
migrations.   The gray whale, minke whale, killer  whale, harbor porpoise, and
Ball  porpoise  were the  most  common  cetaceans.  The  harbor  seal,  though
primarily a nearshore inhabitant, was the most common  pinniped.

     Four species of fish-eating birds were most common  in offshore  waters:
the  Common  Murre,   Brandt's  Cormorant,  Western  Grebe,  and  Arctic  Loon.
Although variable in their feeding habits over the spectrum of pelagic fishes
available to them, these birds occurred in relatively  predictable periods and
concentrations  as  a  function  of  breeding,   roosting,  and  migration.   The
mobile, gregarious birds foraging in offshore  waters  functioned  sometimes in
pure flocks of one species, and often in multispecies  assemblages.  They were
capable of taking advantage of feeding opportunities which existed for a very
brief  time when schools  of fish were near the surface or during periods when
prey concentrations  were found in tidal fronts.

     A  composite  of the  10 most frequently observed  bird species per season
within  the   four  offshore  habitats  (Appendix  Tables  III-U  through  III-X)
indicates  28   species  utilize  offshore  habitats.   One   species  (Hooded
Merganser)  is  considered  incidental  in  the  offshore  habitats.   Of  the
remaining species,   16 can  be considered obligate piscivores,  three  can be
considered   obligate  planktivores  (Fort-tailed  Storm   Petrel,   Northern
Phalarope,  and Cassin's  Auklet),  two are gulls which  specialize on large
plankton and small fish (Bonaparte's and Mew Gulls),  one  is a kleptoparasite
while  in the study  area (Parasitic Jaeger),  and  the remaining species are
omnivores (large gulls).

     The  offshore   bird  population  is  composed  of large  numbers  of  a
relatively few  species when compared to nearshore  habitats.   As an example,
Table  8 shows  characteristic winter bird species  composition and percent of
total  estimated population for winter in offshore waters of some regions.
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o
CO
       Table 8.  Percentage of estimated total winter populations of major marine birds
                 by species or species groups for selected offshore regions and total
                 densities per region, 1978-1979.
Western
Strait of
ijuan de Fuca
Diving birds
Loons 2
Grebes 3
Cormorants
Common Murre
Other alcids
Other species
Ducks
Gulls
Total estimated
birds
Birds /km 2

< 1
< 1
< 1
68
1

< 1
30

37,000
19.6
Eastern
Strait of Admiralty
Juan de Fuca Inlet

< 1
1
4
28
3

9
56

36,000
22.1

1
7
1
26
7

4
53

3,000
50.8
Western Eastern Southern
Strait of Strait of Rosario
Georgia Georgia Strait

2
2
1
36
5

3
49

1,300
3.5

6
6
2
39
7

19 "*
23

22,000
76.6

4
< 1
10
59
2

1
24

9,500
84.8
Offshore
Active Bellingham
Pass Bay

21
< 1
40
6
< 1

3
29

4,000
385.5

3
.62
2
9
2

10
11

32,000
258.7
       * Gulls may be overstated:  some data from ferry - no allowance for ship following here.
        Almost all Arctic Loons.
       3 Almost all Western Grebes.
        Mostly Oldsquaws.

       Source:  unpublished MESA data.

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     Species and groups of species  of  birds and mammals differ  in  their use
of  the  offshore  areas,  relating  to  needs  to  come  ashore  diurnally  or
seasonally during their presence in the study area.  Several  species  have no
direct ties with  nearshore  habitats while they  are  present within  the study
area.  The  cetaceans  do  not come ashore at  all under  normal circumstances.
The  murres,  with  a  fall-winter  population  likely  in  the  hundreds  of
thousands,  form one  of the  major components of  the  offshore  system  and are
almost exclusively dependent upon it (Table 9).
Table 9.  Percentage of selected major wintering bird species occurring
          in offshore waters in the study area.
                              Number estimated         Percent in
                               in study area         offshore waters
      Arctic Loon                   4,800                  82
      Western Grebe                72,000                  77
      Brandt's Cormorant*           3,700                  58
      Common Murre                 81,000                  96
*Some censused at roosts onshore; numbers using offshore waters
understated.  Source:  Unpublished MESA data.
     Other species use the offshore waters to a large extent for foraging but
spend a proportion of their lives ashore.  These include Brandt's Cormorants,
which roost  ashore.   The Rhinoceros Auklet spends  all  its nonnesting season
on  the  water,  otherwise  coming  ashore  nightly  during  its  spring-summer
nesting season.   For these  highly specialized  diving  animals,  the foraging
opportunities of the offshore areas are essential.  In  the case  of  a species
like  the  Rhinoceros  Auklet, breeding  within  the study  area  and  foraging
offshore,   reproductive   success  and  maintenance  of  adult  populations  may
depend on localized food resources of the offshore area.

     For fishes there has  been  little effort to  identify  the  offshore water
assemblages in the Strait of Juan de Fuca or northern Puget Sound.  Neverthe-
less, it is reasonable to separate the offshore fishes  into surface organisms
(upper  few  meters of the  water column), mid-water (from  a  few  meters below
the surface  to  a  few meters above  the bottom),  and demersal  (on  the bottom
and a few meters above it).

     The offshore surface waters were particularly  notable during the winter
and spring months  for large quantities of pelagic fish eggs and larvae.  The
most common eggs were those of flatfish species  (which  all have  pelagic eggs
except rock sole); but there were also eggs of the cod  fishes,  pollock, hake,
and probably tomcod  (but  not  Pacific cod which have  demersal   eggs).   The
variety of   larvae  found in  the offshore  surface  water was  great  (Chester
et al., 1977),  including smelts, cod fishes, sculpin,  and flatfishes.   They
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were dominated by the greenlings (including the lingcod),  mostly  one or more
species  of  Hexagrammos  (white-spotted-,  kelp-, or  rock-greenlings).   There
were also some juvenile and adult fishes seen in offshore  surface waters, but
quantitative  data are  lacking.   Juvenile  and  adult herring  may congregate
right at the surface (herring balls) at most any time of  the  year or time of
day, although  the youngest  juveniles  are known to  school at the surface at
dusk (Hart, 1973).  Many marine birds were  attracted to these herring balls.
At times juvenile salmon were seen migrating at the  surface across open water
(such as  the  Strait  of  Georgia),  and even  adult  salmon  (and other fishes)
were occasionally  found right at the surface.  The  nature and predictability
of these surface aggregations has not been  determined.

     This apparent unpredictability fits into the well-known  foraging pattern
of gulls over the water  surface.  Feeding assemblages of birds are apparently
unpredictable in time and space.  Enough study has not  been done  to  determine
if  the  gulls  are  the  nuclear  species,  the  species  that   starts feeding
assemblages.   But the  foraging  pattern of gulls is such that it allows for
the finding of  unpredictable food sources.  Once an individual finds a  food
source,  its behavior communicates to other gulls  and other bird species the
presence of food.  Fishermen have learned to read these feeding activities as
'well.  There is some thought that the Rhinoceros Auklet may drive prey items,
schooling  fish, to  the  surface and  make  them  available to a  variety of
surface  foragers.

     Offshore  mid-water  also  apparently  supports  sizable  aggregation? of
fish,  but standardized  survey  data are  again  generally lacking.   It is not
likely that many  pelagic fish eggs occur  in offshore mid-water  (although it
should be noted that many pelagic  fish eggs eventually sink  from the surface
waters).   Chester et al.  (1977) indicated  from  the oblique  bongo net  tows
they  made  in  the  upper  50 m offshore  stations, that  a  fairly diverse
assemblage of  larvae was present including  the  more  abundant  Pacific herring,
in  addition to  smelts,  Pacific  sand lance,  cod  fishes,  sculpins,  pricklebacks
 (blennies), rockfish,  English sole, rock  sole,  and other flatfish.   There has
been no  systematic offshore mid-water  survey  of juvenile and adult  fishes in
the Strait of  Juan de  Fuca and  northern Puget  Sound, but  clearly such waters
are the  primary or secondary habitat of  most  adult  and many  juvenile pelagic
fish species.   Many  species  are fished commercially  and recreationally  in the
offshore mid-water,  such as spiny  dogfish, Pacific  herring,  salmon  (all five
species),  cut-throat trout, steelhead  trout,  surf  smelt, Pacific cod,  hake,
tomcod,  pollock,  Pacific sand lance,  and  several species of pelagic  rockfish.
Some of  these  fishes occur  in the  offshore mid-water during one season  (e.g.,
herring  adults, chinook salmon adults)  or during  a particular  life history
stage  (e.g., juvenile  herring and  salmon),  while other species occur through-
out all  seasons and life history  stages  (e.g.,  tomcod and pollock). Various
combinations may  also  occur.

     The offshore bottom waters have had little or  no sampling for  fish eggs
and larvae.   Major offshore demersal  spawning  may  occur  in  deep water.  For
 example, while there is  direct  evidence  for lingcod spawning in the subtidal
 depths   (i.e.,<20m)  and indirect evidence  for  Pacific  cod spawning  there
 also, many  fisheries biologists believe both the lingcod and  Pacific cod also
have deep offshore spawning  grounds where their demersal  eggs are  deposited.
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The evidence  is  also beginning to mount  that  there are demersal fish larvae
that spend all or part of their larval life on or near  (perhaps  even in) the
bottom.  Unfortunately,  the supporting evidence  for the previous statements
about eggs and larvae in offshore bottom waters is entirely circumstantial.

     Deep   offshore  bottom   waters   are  important   for   commercial  and
recreational  fishing in the area.  Such economically valuable demersal fishes
include  the  demersal  rockfishes  (several  species),   sablefish  juveniles,
whitespotted  greenling, lingcod, and  flatfish  (several  species including the
Pacific  halibut).   Other  abundant demersal  species in  the  offshore bottom
waters  which are important  ecologically  as  forage  organisms,  predators,
scavengers,  etc.  include  skates (two species), ratfish, midshipman, eelpouts
(two or three species), snake prickleback,  bay  goby, sculpins (two  species),
and poachers  (two species).

     It is worth  pointing out that demersal species  have been found to  group
primarily on the basis of depth and  only secondarily by geographic  locality.
In  central  and  southern  Puget Sound,  the demersal  fishes  caught  in  trawl
collections were  found to form  distinct groups  associated with depths of less
than 30 m, 30-70  m,  and greater than  70 m.

     The herbivorous zooplankton included  copepods  such as Pseudocalanus and
Calanus.   Plankton  carnivores included  ctenophores   such  as  Beroe and
Pleurobrachia;  chaetognaths such  as  Sagitta and Eukrohnia;  and crustaceans
such as Parathemisto (hyperiid amphipod),  Pasiphaea (shrimp),  and Podon and
Evading,  (cladocerans).   Nektonic carnivores are primarily larval and juvenile
fishes,  including  Pacific  herring,   Pacific  sand  lance,  smelts,  Pacific
salmon,  and  greenlings.  Piscivorous  fishes  are  assumed to include maturing
or resident  Pacific  salmon, Pacific hake,  and walleye pollock.

     There  were  some  apparent differences in  species' habitat preferences
among  offshore  communities occurring in  the  bays,  passages,  and open waters
of the  study area, particularly as far  as birds are concerned.

IV.  C.  3.  a. (1)   Bays.   Marine mammals  were less  frequently  observed  in
deeper  waters of -the large bays than in  nearshore  waters.  Harbor  seals were
the most abundant mammal in this habitat.

     While  the four major  offshore bird  species occurred in all the  deeper
bays, the predominant  fish-eating  species in Bellingham Bay,  one of  the  major
deep  bays  in the study area,  was the  Western Grebe (Appendix Table  III-U);
the other species were relatively  less  abundant.

IV.  C.  3.  a. (2)  Narrow passages.   Northern and  California sea  lions were
observed  in  the  narrow passages  of  Active Pass  and  San  Juan  Channel more
frequently  than  in many other  foraging  habitats.  Harbor seals were also seen
in this habitat,  though rarely.

     The  composition  of  bird  populations in narrow passages differed from
that in deep bays.   Brandt's  Cormorants and Arctic  Loons occurred  in greatest
densities in passages  (e.g., Active Pass,  Appendix  Table III-V).   Bonaparte's
Gull also occurred  in  high  densities  in narrow  passages (Active Pass),  though


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they  also  occurred in a patchy distribution throughout the offshore habitats,'
especially in  tidal  fronts where  plankton was  concentrated.   Quantities of
pelagic fish  eggs and larvae occurred particularly in winter and spring; and,
indeed, relatively high densities of Bonaparte's Gulls were offshore at these
times  (Appendix  Tables III-U  through  III-X).   Fish-eating species  (Arctic
Loons,  Brandt's  Cormorants) also  occurred in peak numbers  at locations and
habitats where  concentrations of  eggs  and larvae  presumably  attract  fish.
These may  also relate  to  proximity to  nesting sites,  roosts, and haul-out
areas (in the cases  of birds  and pinnipeds),  or variations in oceanographic
features like salinity and turbidity.

IV. C.  3.  a.   (3)   Broad passages.   Unlike birds,  pinnipeds and cetaceans do
not  appear to  be as  obviously  keyed on  "fronts."  However,  killer whales
travel in pods, occasionally totalling among all pods over  75  animals in the
study  area,  and  foraging  within  concentrations  of  prey  (e.g.,  salmonids)
would  seem essential  to  even small groups.   Minke whales  were  most  often
observed in broad  passages or along steep shorelines  with tidal  convergence
action where  plankton and small fish prey were concentrated.  While cetaceans
were infrequently  encountered,  seabirds  were occasionally observed following
large marine  mammals as they do in other areas.

     As  in  narrow  passages,  major  feeding  functions  of  birds in  broad
passages  resulted  from concentrations  of  prey  species in  tidal  fronts and
eddies.  This phenomenon is transitory but it  is consistent  and birds may, as
a result, become concentrated.  Prey would seem  less likely  to  be  in schools,
but  rather   simply  concentrated  by   currents,   and  cooperation  between
individual predators would  seem less advantageous  here.   Gulls serve less as
catalysts, and diving birds often forage independently.  Both  surface-feeding
and  underwater-feeding  species  usually  fly   up-current,  and   feed  while
drifting   down-current  to  a  presumed  point   where   feeding  becomes   less
efficient  then they repeat  the procedure.

     This  activity was  patchy,  with  observed  densities  of animals varying
greatly during  censuses over the offshore waters  of  broad  passages.   As an
example, density of all species in most of southern Rosario  Strait was  19/km
in the fall,  while the densities of birds on  a census transect from Shannon
Point  to  Bird Rocks were  as  high  as 907 and  2171/km2.  The predator species
involved were generally highly mobile and  gregarious.

     Relative abundance of  bird species shifted  from  the patterns  of bays and
narrow passages  in this habitat.  The Common  Murre was the dominant species
among  the fish-eating species  during the  fall  and winter  seasons,   while
Rhinoceros Auklets were present in  summer  (Appendix Table  III-W).

IV.  C. 3. a.  (4)   Open waters.   Cetaceans  were most  frequently  observed  in
the  open waters  of  the study area, particularly the  Strait of Juan de  Fuca.
Minke  whales  and  Dall porpoise were found  mostly in  open waters.    Killer
whales and harbor  porpoise were also found there,  but were occasionally  found
in nearshore waters also.

     The  avian community composition of open  waters  resembled that of  broad
passages.  Common Murres  dominated the fish-eating  species for the fall and


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winter period, while  Rhinoceros Auklets were the  abundant  species in summer
(Appendix Table III-X).

     During .aerial  censuses, herring  balls were  observed  in open waters of
the  Strait  of  Juan de Fuca being preyed  upon  from the surface by gulls and
Rhinoceros Auklets feeding from below the surface.  Gulls often find a school
while foraging from the air; and, since these birds are highly visible,  their
feeding  behavior  attracts other  gulls and  divers,  which  in our study area
will  often  be  Arctic  Loons,  Brandt's   Cormorants,   Common  Murres,  and
Rhinoceros  Auklets.   Additionally,  jaegers steal  food  from diving birds and
gulls.  The complementary attacks on prey from the surface  by gulls and from
below by divers may  maximize exploitation of the opportunity by tending to
keep schools of prey species "rounded up."  However, these  feeding activities
are  temporary  and  birds attracted from long distances  may arrive after prey
is dispersed.

     Another type  of  feeding is likely very important  but poorly understood
for the study area.  This activity is  related  to availability of  zooplankton
which ascends to surface waters during hours of  darkness.   Many seabirds feed
at  night.   Zooplankton availability  may  explain the  movements  of  Common
Murres  from the Strait of  Juan de Fuca into Rosario  Strait in the daytime;
the murres  may forage on plankton and  plankton-associated fish  at  night in
the Strait, and on prey in tidal fronts in  Rosario Strait during  the day.

     In addition, phalaropes, which are essentially  fall migrants, are  known
to  feed  directly on  concentrations  of planktonic organisms on the surface.
From mid-July  to  September, Northern  Phalaropes  were  seen in drift  or rip
lines in open waters and passages.  This activity  increases with proximity to
the ocean.

IV.  C.  3.  b.   Trophic  organization.   The structure of the offshore food web
(Figure 30)  resembles  the  classic  autotrophically-based  pelagic community
characterized   by   a   phytoplankton-herbivorous   zooplankton-carnivorous
zooplankton-planktivorous fishes energy flow (Hardy, 1924); although it  is in
all  probability a  more complex and interlinked  system  (Gushing,  1970; Petipa
et al., 1970).

     The  major  forms  of  phytoplankton  included  diatoms,  dinoflagellates,
coccolithophorids,  and various   microflagellates.    Microflagellates  were
dominant  in the Strait during late fall and winter.   Diatoms were dominant
during  spring  and early  summer,  and  occasionally  during  a  fall  bloom.
Dinoflagellates reached their  maximum 'abundance during late  summer and  early
fall.   Variability in  community  composition  was  very  high  spatially and
between replicates.

     The grouping of producer and consumer  organisms  into  feeding categories
has masked  the considerable temporal and spatial  variation in the taxonomic
and  size  composition  of the organisms within these  groups.  The herbivorous
zooplankton,  for  instance,  included both the relatively small (1-2 mm  long)
calanoid copepod Pseudocalanus minutus, which was  found  in surface waters at
high  densities,  and   large  (2-4 mm  long)  Calanus  spp.   (principally  £.
plumchrus.  and  a  complex  of  C.  pacificus/C.  marshallae)  which  resided
                                      108

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       OFFSHORE
       O o.i-1
PISCIVOROUS
MARINE
MAMMALS
                 PISCIVOROUS
                 FISHES
         PISCIVOROUS
         BIRDS
                         ZOOPLANKTIVOROUS
                         FISHES,,
                         C?)
                         ZOOPLANKTIVOROUS
                         BIRDS
                   CARNIVOROUS
                   ZOOPLANKTON
                            HERBIVOROUS
                            ZOOPLANKTON
                            (1.0)
                             PHYTOPLANKTON
Figure 30.  Characterization of offshore habitat food web.   Average biomass
           of major taxa represented in parentheses (grains /m or grams/m3).

                                  1 09

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principally in deep water as  adults,  though migrating into surface waters at
night.   Not  only are  the  requisite  food  (phytoplankton)  particle  sizes
different  for these calanoids,  their relative  production rate in  terms of
generation times are also divergent  (1 per  year  for Pseudocalanus  vs. 6 to 9
per year for Calanus) (Mackas et al., 1980).

     The carnivorous zooplankton and zooplanktivorous fishes varied even more
dramatically  over  time and  space.   Considering  the  kinds  of  sizes  and
morphological features  associated  with feeding by  these  animals,  the single
trophic  link  shown between  them and their  prey  is  not representative of the
complex, variable  flow of energy between primary and secondary carnivores.

     Despite the tremendous potential productivity  of the  lower trophic level
organisms  in  this  food  web,  the standing stock  of  consumers  does  not appear
to  be high.   The rapid  turnover  in  organic matter through  predation and
population regeneration, however,  belie the actually  dynamic  flow of energy
through  this  food web.   The  spatial and temporal  distributions   of  prey
resources  for various consumer groups are,  on the other hand, highly variable
and patchy due to  the influences of the complex  oceanographic characteristics
of  the  study area.  Strong  advection and  tidal mixing,  wind-driven (Ekman)
upwelling,  and   the   influences  of  estuarine  circulation  contribute  to
large-scale patchiness  in the standing stock and productivity of zooplankton
(Mackas  et al.,  1980 ;  Bowman  and Esaias,  1978).  These frontal processes
dominate the habitat only in  narrow passages such  as Admiralty Inlet.  Thus,
secondary  and tertiary  consumers are  limited  in  their  ability  to utilize
these  prey resources  by the predictability,  frequency  of  occurrence,  and
spatial  coverage  of  these optimal foraging zones.   So,  while production and
the rate of energy flow through  the  offshore (pelagic) food web may be high,
it  is typically  concentrated  in localized zones and is not representative of
the habitat as a whole.

IV.  C.  3.  c.    Density,  biomass, species  richness.   The  research design
utilized to  describe  local  marine mammal concentrations focused  on  the more
easily   observed   pinnipeds   which  haul  out  throughout  the  study  area.
Consequently,  there is little  quantitative information  available  for the
offshore  areas.   Essentially,  all  of  the  21  species  of  marine  mammals
documented  in the study  area could occur  in offshore  areas,  although some
species  (notably  river otters)  probably   rarely,  if ever,  leave nearshore
waters.  Cetaceans were an  important component  of  this  area  and appeared to
be  most  abundant with  the influx of spring and summer  migrants.   Sea lions
forage  in  this habitat- as  well,  and  were most  abundant in  the  study area
during  winter months.   While some  harbor seals  undoubtedly  forage  in the
offshore areas,  the extent that  these  habitats  are used by the population as
a whole  is unknown.

     Offshore  habitats are  generally characterized  by  low  numbers  of bird
species,  low  density,   and   low  biomass.   This pattern  becomes  especially
apparent   when    comparing   the   measurements    for   open   waters   with
intertidal/subtidal habitats  (Appendix Tables III-A  through  III-H and III-U
through  III-X).   This  effect   is,   in  part,   explained by  the   lack  of
appropriate  habitat for  foraging for  many species.   In  the  deep   offshore
habitats,  diving  species  are unable  to reach  the  bottom to  feed.  Thus,


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species  that  are present  must  be able  to  feed  on the  surface or  in  the
near-surface waters,  or be  able to dive into the mid-water column  to  feed or
feed  elsewhere.  These restrictions immediately eliminate many  species that
are adapted to feed  in shallow water areas  or onshore.  Additionally,  many
species  are not capable of  sustained presences in offshore habitats.   This is
due to a poor  swimming capability, their inability to float on  the water  for
long  periods of time, or their inability to stay airborne for long periods of
time.   The  species  commonly  found  in offshore  waters  are loons,  grebes,
jaegers,  gulls,  cormorants,  and  alcids.   These  species  are  either strong
fliers,  or can stay  on the open  waters for indefinite periods of time;  and
all are  specialized as surface feeders or divers.

     The number of  species  on  the offshore waters is generally  low,  but  the
total number  of individuals  is  often high  because the amount  of  offshore
habitat  in the study  area  is vast compared  to  other habitats.   Thus, Common
Murres in the  late  summer often start to invade the  study area from the outer
coast and peak in  numbers   in  the late fall at which  time the  density  may
reach as  high as  30 to 80 birds per km2 in  certain areas.  When the total
counts are projected,  their numbers  approach a quarter  million  birds in the
study area, far outnumbering any other species count in any other habitat.

     The  offshore  habitats showed  seasonal  patterns  of  abundance,  with
numbers  generally at the lowest level during the summer months.  At that time
densities as  low as eight birds per km2 were common.  Peak seasonal densities
usually   did  not  equal  those   seen  in  other  habitats,  especially  the
intertidal/subtidal habitats.   The highest  density  level seen  for  offshore
habitats was  229 birds per km  in narrow  passages.   The density  levels for
the intertidal/subtidal habitats  reached several times this level.

     Deep-water bays  usually have the lowest  numbers  of species  of all the
offshore habitats.    Bays,  like all other  habitats,  show seasonal variations
with peak numbers  of species, density, and biomass  during the winter months.
The highest seasonal density and  biomass levels of the offshore habitats were
recorded  in narrow passages  where flocks  of  birds  foraged.   Even including
populations associated with adjacent breeding  colonies,  the summer values for
number   of species,  density,  and biomass  were the lowest recorded in the
offshore habitats.   The  fall  and winter numbers were only  a fraction of the
previous habitat values.

     The  open waters  of  the  study  area  are the  single largest  habitat.
Except   for the  summer, the  values  of bird density  and  biomass  in this
habitat  were the lowest  recorded in the study  area.  The  summer values were
only slightly larger than  in other areas.   However,  though  the values of
density  and biomass  were low,  the number  of species observed was relatively
high in comparison to  the other habitats,  perhaps  due to the passage  of birds
between other nearshore  or  intertidal/subtidal habitats.

     Many of  the stations  sampled by  surface trawl  in the Strait of Georgia
by Robinson et al.  (1968a  and b), Barraclough and  Fulton  (1967  and  1968),
Barraclough et al.   (1968),  Robinson  (1969),  and  Barraclough  (1967a and b)
included offshore,  broad passage  habitats.   Species  richness of fish  averaged
9-10 during these  spring and  summer  (April-July)  collections.   And  although
                                     111

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there was  no quantification  of  the area  or volume  sampled,  the consistent
sampling methodology allows  comparisons  of species density.   Depending upon
time  of  season and  influence  of  the  Fraser River  plume,   the  typically
prominent fishes included  larval and postlarval Pacific  herring  and Pacific
sand lance, larval walleye pollock and rockfish, juvenile Pacific salmon, and
juvenile  greenling   (Hexagrammidae).    Other   species   which  were   only
infrequently captured in abundance included postlarval eulachon (Thaleichthys
pacificus),  larval  starry   flounder,  ronquils   (Bathymasteridae),   river
lampreys  (Lampetra  ayresii),  and  threespine  sticklebacks   (Gasterosteus
aculeatus).

     Offshore  phytoplankton,  zooplankton,  and  ichthyoplankton  data  were
collected at nine  sites  in the  Strait at  several  depths with a  variety of
methods.  The data were  reported in several documents (Chester et al., 1977;
Chester, 1978; Chester et al., 1980).

     Phytoplankton biomass.  as measured  as  chlorophyll £,  ranged from about
10 mg/n? to  over  500 mg/m^ in  the  upper  50 m  of the  water  column.   Most
measurements were in the 10-75 mg/m2 range.  However, a distinct spring bloom
was recorded  in June of  1976 in which about 500 mg  chl  a/m  were observed.
Diatoms contributed  to much  of the biomass,  especially  in the spring.  Most
samples had  1,000  to 10,000  diatoms per  liter, some had up  to  100,000 per
liter, and those collected during the spring of  1976 bloom exceeded  1 million
per liter in the upper 1 m of water.  Over the  two-year  study, 93 species in
32  genera   were   identified.    During  the  same  period,   23  species  of
dinoflagellates in 11  genera were identified.   They  were less abundant than
diatoms.   Most  samples  had  100 to 1,000 dinoflagellates per liter,  while
those collected during the spring of 1976 bloom  had 100,000 per liter  in the
upper   1m   of  water.    Coccolithophorids  occurred  sporadically,  usually
associated with oceanic intrusions of surface water.

     Zooplankton  settled volumes  were used as  an index of  biomass.   Most
samples taken in  oblique (50-0 m)  tows with  333 y m mesh  size nets captured
less  than 1 ml/m3, often  less  than 0.5  ml/m3 in  the fall and winter.  Some
samples  taken  in the  spring  had  up  to  2  ml/m  .    Finer-mesh  (211 pm)
vertically towed nets  often  captured  1 to 2 ml/m 3 in the upper 100 m with a
maximum of 16.6 ml/m3 during the spring of 1976  bloom.  More than 100 species
of zooplankton  were  identified,  60 of which were copepods.   Four species of
euphausiids and 'four of  chaetognaths were found.   During the  spring of 1976
bloom,  80% of  the numbers of zooplankton  collected were of a single copepod
type  (Pseudocalanus spp.).

     Ichthyoplankton densities  in  oblique  tows  (333 ym)  from  50 to 0 m depth
ranged  from  less  than  0.1  to  0.7  eggs/n?  and from  less than  0.1  to  0.7
larvae/m3.   Pleuston net  (333ym)  samples ranged in densities  from less than
1  to  more  than  10  eggs/m3 and  less  than   1   to  over   100  larvae/m3.
Ichthyoplankton were clearly most concentrated near the surface, as indicated
by the pleuston net samples.   They also were most  concentrated in the spring
and  summer  months (April  through  June).   Numbers of taxa  ranged   from 1 in
winter  (November)  to up to 20 in late winter (March) in oblique tows and 1 in
late  summer  (August-September)  to  13 in late winter-early  spring (March-
April) in pleuston nets.  Biomass data were not  collected.
                                      112

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 IV. C. 3.  d.   Migrants.  Generally, migrations  can be considered as  falling
 into two  categories.   The  first  involves local  populations which  typically
 perform small-scale or  short movements from  one  local area to another.   The
 second category includes  large-scale movements performed by large numbers  of
 animals (generally belonging to one species)  moving through  the study  area to
 the extremes of their ranges.  Often these movements can  cover many  thousands
 of miles.

     Movements  of  marine mammals  were difficult to  assess  with the  survey
 methodologies used  in the study.  Cetaceans  were generally more abundant  in
 the  spring   and   summer   months   presumably  in   response  to  increasing
 productivity  in the  study  area.  However,   survey  efforts in the  fall  and
 winter have  been so  low that  lack  of  any  species in  an  area  during  this
 period may simply  imply no data.   As  an  example,  the Dall  porpoise  was
 usually  seen  in  our surveys  in  low numbers during  the  fall  and  winter.
 However,   this  species was  regularly  observed throughout the Strait  of  Juan
 de Fuca from  recent  surveys conducted aboard the NOAA ship John Cobb  in the
 fall and winter of 1979-1980.

     Certainly  one  of  the  most  unique  movements  of marine mammals   in  the
 study  area is  the  long migration  of  the  California   gray whale  from  its
 breeding  grounds  in  Baja California to its  foraging areas in the Bering and
 Chukchi  Seas.   During  the  late  winter-early   spring,  this  species  moves
 northward  through  Washington's  coastal  waters,  passing  through   the  far
 western  Strait  of  Juan  de  Fuca  between  Tatoosh  Island and Pachena  Point.
 Occasionally,   individuals   penetrate  deep   into  the  inland  waters.   The
 majority  of the gray  whale  population also pass  through  to  Washington waters
 during their southbound migration  in the  late fall.

     The  most  notable  movements  of  pinnipeds   are made by  California  and
 northern  sea  lions,  described  above  as  foraging  in offshore and  nearshore
 waters and hauling out  on  rocks.   Both  species were observed to  enter the
 inland waters in the  late fall, peak in abundance in the winter,  and decrease
 through  spring.  By  summer both  species  were   essentially  absent  from  the
 study area.  Presumably,  these movements  are timed  with the onset of breeding
 activities (outside of Washington) in  the spring.

     The  effects  of migrations  were reflected clearly  in the seasonal  rise
 and  fall  of  bird densities  at  the various  census  points in the  study area.
 Typically, many species are  highly migratory and  can be expected  in  the study
 area only during  certain times of the year.   The most dramatic  example  of a
 large-scale movement  through the  study  area was  that  of  the Common Murre.
 This  species  was observed  to enter the  study area in  large numbers  in the
 early fall (August to September).  By  late winter-early spring, a movement to
 breeding  areas  along  the outer coast south to the  Farallon Islands  and north
 to Alaska occurred.

     Another  example  of  migratory seabirds  in the study area is Rhinoceros
 Auklet which were absent  from the area in the late  fall  and winter, spending
 those  seasons  along  the  outer  coast  south  to  southern  California  and
 returning to breeding islands  (primarily  Protection Island)  in  the spring and
r summer.   Other  species  that  usually  come  up  the  coast included  the Heermann's
 Gull, which entered the Strait of  Juan de Fuca in the late summer.
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     Generally,  bird  movements   through   this  area  follow   the  pattern
demonstrated by  the Common  Murre—abundant  during  the nonbreeding fall and
winter and virtually absent during the breeding periods  (spring and summer).
Included  in  this scenario  are Western Grebes  which typically  leave  in the
spring for breeding sites inland; Arctic  Loons which  arrive in  the  winter
from northern  nesting  grounds; and Brandt's Cormorants entering from coastal
areas.  Large  numbers  of  gulls  (Bonaparte's,  California, Mew  and Thayer's)
pass through the study area during fall migrations and spend a large portion
of  their  time foraging in tide  rips  and other  productive  areas  (often  in
nearshore  waters).   The   only offshore  "ducks"  in this  area are  several
thousand  Oldsquaw  which  usually  appear  in  late  fall   and  remain  through
spring.   They  are   often particularly  abundant  in the  eastern  Strait  of
Georgia and deep bays  (e.g., Discovery Bay).

     Smaller-scale  movements  of  birds  are less easily understood but small
numbers of phalaropes,  storm-petrels,  Sooty Shearwaters,  and Tufted  Puffins
migrate through  the study  area  in  the spring and  fall.  They often remain
into  summer  or  winter, respectively.   Many  of the  species leave breeding
areas within the study area during winter months to forage in offshore water.

     The offshore waters in the study area are  used  extensively  by fishes in
their migrations.  Most notable are the adult salmon migrations (all species)
in  the summer  and fall when the  salmon move through the Strait  of  Juan de
Fuca,  Hood Canal,  Puget  Sound,  and  north through  and  around the San Juan
Islands and Georgia Strait  to  the Fraser River and  other smaller  rivers and
streams.   Juvenile  salmon reverse the migrations to the open ocean.  Although
pink and chum  salmon appear to use both the nearshore and offshore waters as
they migrate  to  sea, juvenile sockeye, Chinook, and coho appear to primarily
utilize  the offshore  waters.    Steelhead  trout  also utilize  the offshore
waters for migration purposes  in  much the same manner as salmon do.

     Adult herring  make large  offshore spawning migrations from the ocean to
their  major  spawning  grounds  along  the shoreline  from Sandy Point to Birch
Bay in the Georgia  Strait.  They  also move to other  spawning  areas along the
Strait of Juan de Fuca, among  the San Juan Islands, in Hood Canal,  and in the
Puget Sound central basin.  Spawning and, presumably, most  of the migrations
occur  from about  December  to June  with  generally the  earlier  spawning in
southern  areas  and later  spawning  in  the more  northern  areas.   Although
juvenile herring are initially clearly associated with nearshore waters, they
usually move to  deeper offshore waters in the winter as  they continue their
migration to the ocean.

     Surf smelt migrations are not well-understood.   Spawning occurs  in most
months of  the  year  on saltwater  beaches, although specific time varies among
sites.  The later larvae, juveniles, and adults occur in the offshore waters;
but  it is  not  known  whether extensive  migrations  are  made or  just local
movements in  the general  vicinity of spawning  grounds.   Longfin smelt spawn
in  the fall   in  freshwater streams,  and adults  are  often  caught near the
bottom in  offshore  waters.  As with surf  smelt,  it is  not clear what the
pattern or  extent  of  migrations or movements  are  between  the  nearshore and
offshore waters  other  than the fact that there is movement.
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     Among   the   cod    fishes,   Pacific   cod   spawning   migrations   are
well-documented.  Cod migrate  through the Strait of Juan de Fuca to spawn in
the nearshore waters  of Protection Island, Port  Townsend  Bay,  and elsewhere
during the winter and then disperse into the offshore waters of the Strait to
feed for the remainder of the year.  Juvenile Pacific cod  appear  to move out
of nearshore areas to the offshore water of the Strait of Juan de Fuca by the
time they are one year old.

     Lingcod make  spawning migrations in  the winter and spring from offshore
bottom waters  to nearshore waters  for the purpose  of  depositing  eggs  in a
nest on rocky substrates.  While  female lingcod then return  to deeper waters,
male lingcod precede the female from  offshore waters  to nearshore waters and
remain  to  guard the nests for several weeks following  spawning.  However, it
has not been established what percentage  of lingcod  spawning is also done on
offshore  bottom reefs  rather than on nearshore  reefs.   Thus,  it  is unknown
what percentage of  females or males remain in the offshore bottom waters.

     Finally,  there is  a  true migration  different than the  usual once-a-year
seasonal  spawning migrations.  This  migration  is part of the  life cycle of
the  sablefish and yellowtail rockfish,  and perhaps other species.  Based on
the  indirect evidence  that  the  larvae and early  juveniles  of  these  species
have  not  been  caught   in  the  extensive  nearshore  sampling, this  migration
probably  occurs  primarily  in  the  offshore waters.   Only  juvenile  (i.e.,
sexually  immature) specimens of  sablefish and yellowtail rockfish have been
 caught  in Puget Sound,  Hood  Canal, the San Juan Islands, and the eastern half
of the Strait  of  Juan  de Fuca.   Several age groups of both species have been
 caught.   When they become adults (sexually mature),  they migrate  out  to the
 open ocean  where spawning  occurs—this  pattern  has  been demonstrated  to  a
 very limited degree by tagging,  but the evidence is primarily circumstantial,
 based  on research  samples  and  commercial  and  sportfishing  catches.   The
 adults do not migrate back to inland waters after spawning, but  remain in or
 near the open  ocean.   However,   the larvae and/or juveniles migrate back into
 Puget Sound  and the  San Juan Islands  area.   As stated  earlier, the term
 "migration" is used in  this report to include both passive  (larval drift) and
 active transport (swimming).

      Many  species show local,   small-scale  movements  on  a  seasonal  and/or
 day-night  basis   that  are  correlated   with  physical   factors   such  as
 temperature, protection from predators,  and amount  of light,  or biological
 factors such as feeding activity.  Seasonal movement between the offshore and
 nearshore waters  seems to be primarily  a matter of nearshore species  moving
 into offshore waters in the winter when  the nearshore hydrographic  conditions
 and, perhaps,  food supply are poor,  rather than  seasonal movement by offshore
 species  into  the nearshore.  An exception  is  migrations involving spawning;
 it appears that offshore species spawning in the nearshore  areas stop  feeding
 enroute to the  spawning area.  Examples  of  nearshore  species moving into the
 offshore  waters  in  the winter  include  black  rockfish,  juvenile  yellowtail
 rockfish, surfperches, herring,  and  smelt.  It  is  also known that day-night
 movements  of  fish  take place,  consisting primarily of  nocturnal   feeding
 forays of  offshore fishes  into  the  nearshore  waters.   Dogfish, ratfish, cod
 fishes, and some  rockfish are examples of fishes exhibiting this behavior.
                                       115

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IV. C.  3.  e.   Variability.   The limited  data base  presently available for
cetaceans in the study  area  precludes any assessment of  variability at this
time.   Since offshore whales usually occur in small numbers or in pods, their
occurrence at any  location  at any  time  is totally  unpredictable.   However,
the general migratory patterns  of killer whales in and adjacent to the study
area are fairly well known.   Thus, it is likely to find these  animals  in the
southern Strait  of Georgia  in  the  summer in search  of Fraser River salmon.
For both California and northern sea lions, arrival  and departure  dates were
comparable for  both years of the study.  However,  total numbers  of animals
varied from year to year for California sea lions.

     For seabirds,  offshore  species richness varies by season with a greater
number of species occurring in descending order in the  fall,  spring, winter,
and summer.   Total  abundance  of  all  species  does  not   follow this  trend;
largest numbers occur in the fall and decline through the winter  and spring,
and reach a minimum in summer.

     Absolute arrival  and departure  dates for some migratory seabirds  may
vary somewhat from one year to the next.  For example, two species that are a
large component of the offshore winter population—Western Grebes  and Common
Murres—arrived at  different times  over the two-year study period,  and were
about two weeks later in 1979 than in 1978.

     Considerable  variability in species  composition among offshore regions
was observed.   The reasons  for these differences  (see  section IV.C.S.a)  are
not understood  but may  relate to prey availability.  The  standard deviations
calculated for offshore abundance data (Appendix  Tables  III-U through III-X)
demonstrate that variability among sites  representing  a  single habitat type
is often very high.

     Diurnal variability  differs with  the season.   In  nonbreeding seasons,
seabird numbers in  offshore  waters  are similar during  all hours  except that
cormorants and  gulls which  feed  in offshore waters  come ashore at  night to
roost.  During the spring and summer breeding months, apparently few seabirds
remain offshore at night.   Although some may continue to  feed at night, most
nesting cormorants, gulls, and Rhinoceros Auklets are usually onshore.

     The MESA  data demonstrate considerable unexplained  variability in bird
usage of offshore regions in the course of the two-year study.  The projected
abundance estimates for many areas differed in 1978 and 1979.   It is possible
that  much  of  this variability may  relate  to  yearly  differences  in  the
location of prey species  or to sampling  frequency  or to  the location of the
boundaries of artificial census subregions.
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           V.   IDENTIFICATION OF AREAS OF BIOLOGICAL IMPORTANCE
V.  A.  The Need  for  Identifying Areas of Importance

     In  this chapter  the focus  is on those particular  characteristics  that
for one  reason or another make a particular habitat  important.  Factors  that
we  have selected which can be used  to  evaluate the  importance  of  a habitat
include:   algal/eelgrass  biomass;  benthic  faunal  biomass;  occurrence  of
detritus;  the use of  a habitat for foraging by  fish, birds, or mammals; the
use for  reproduction,  rearing, migration,  or  resting; and the  human uses  of
harvesting  (both commercial  and recreational),  recreation, etc.

     Sites  representing various  habitats  for  which  data  on one or another
importance  factors  are available will  be discussed.   It might be expected
that other unstudied sites will also have these important functions  and uses.

     For  resource  managers  concerned with the  impact  of  human use  on the
marine  environment,  these importance  factors  identify  those characteristics
of  a habitat  that  should be carefully evaluated.   These importance factors
and their criteria  can be  of value  in estimating  the  relative  biological
importance  of unstudied  areas of  known physical  characteristics.   Although
one should  not  conclude that a particular importance factor will  always  be
found or applicable at  an  unstudied site, past experience indicates that,  in
the study area,  there  is a  strong possibility it will be found when studied.

V.  B.   Importance Factors and Descriptions of Examples

V.  B. 1.   Rationale  for approach.   The  synthesis team that  prepared  this
report was unable to determine what specific sites or subregions in the study
area were,  overall, highly  important, though each had  identified sites  that
appeared  to  be  important to the respective taxonomic group(s)  they studied.
The data base was incomplete geographically and topically.  Research emphasis
was not applied uniformly   and  continuously  to all areas, thus all parts  of
the study area  could not be  treated equally.

     The  approach taken in  this chapter was selected to allow the readers a
framework  for making  their  own decisions  regarding  the relative  biological
importance of specific sites.  This approach assumes the reader is physically
and  technically  able  to   determine  the  physical  characteristics  (e.g.,
exposure and habitat type)  of the sites or subregions of interest.   Following
that step, the  reader  can refer to Table 10 to determine which factors are to
be  considered  in evaluating  the  site of  interest.  The accompanying  text
provides a brief description of each importance factor and how  it applies  to
each of  the  habitat  types of the study area.
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Table 10.  Importance factor/habitat matrix and sites exemplifying
           each habitat type.
Habitat Type
INTERTIDAL-SUBTIDAL
NEARSHORE
OFFSHORE
1. Mixed coarse
2. Sand
3. Mud-gravel
4. Mud- sand
5. Mud
6. Exposed rock
7. Protected rock
8. Cobble
9. Mixed coarse
10. Sand
11. Mud-gravel
12. Mud- sand :
13. Mud
14. Exposed rock
15. Protected rock
16. Cobble
17. Broad passages
18. Narrow passages
19. Bays
20. Open water
Importance Factors
Nonharvesting
X
X

X

X
X
X





X
X
X


X

Harvesting


X
X
X
X
X
X





X
X
X
X
X
X
X
Roosting
X


X
X
x
X
X
X
X
X
X
X


X


X
X
Migration
X
X
X
X
X
X
X
X
X







X
X

X
Rearing
X
X
X
X
X

X
X


X
X
X


X
X

X
X
Reproduction
X
X



X
X
X












Foraging
X

X
X
X
x
X
X

X
X
X
X
X
X
X
X
X
X
X
Detritus


X
X
X















Benthic Faunal Biomass


X

X
X
X
X












Plant Biomass


X
X
X
X
X
X









X
X

Example (s)
Dungeness Spit
Ebey's Landing
West Beach
Eagle Cove
Beckett Point
Birch Bay
Jamestown
Padilla Bay
Westcott Bay
Tongue Point
Point George
Fidalgo Head
Cherry Point
Morse Creek
Dungeness Spit
West Beach
Beckett Point
Jamestown
Padilla Bay
Pillar Point
Point George
Cherry Point
Admiralty Inlet
Active Pass.
Speiden Channel
Bellingham Bay
Western Strait
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V.  B.  2.  Description of Importance factors and criteria.

V.  B.  2. a.   Recreational and educational use (nonharvesting).  One important
use of intertidal  and nearshore  habitats is for  nonharvesting recreational
uses,  such  as use of habitats  for photography,, beachcombing, education, tide
pool  observing,  shell collecting,  scuba  diving,  and bird-watching.  The bays
are important  for  photography and  boating   (Table  10).  This  list  is  not
exhaustive, but,  instead, is illustrative of the kinds of uses humans make of
these  habitats.

     Some of  these  human uses  are compatible with  the ecological function of
the habitats.  Some   have   a   detrimental impact,  while  others  depend  on
biological  components.    Beachcombing,  sunbathing,  and  swimming  are  not
dependent upon and have  little impact on  biological  resources.   Educational
field  trips,  tide pooling,  and scuba diving are dependent upon the biological
resources;  and, as  long as  collection  is  not permitted,  damage to biological
resources is  minimal.   Shell  collection which takes  live  specimens  from the
intertidal  and  shallow  subtidal  zones  is   destructive  to the  biological
communities.  -

     The areas that are  important are those put to multiple use,  those used
year-round  or  repeatedly   each   season,  or  those  that  require  indigenous
biological  resources  or  high  esthetic  quality  to  be  put  to  use  for
recreation.

V.  B.  2.  b.   Harvesting.  Harvesting,  or the consumptive use  of biological
resources,  is  an  important   consideration   when   any   modification  of  the
environment is  proposed.   One goal of wildlife and fisheries management is to
allow local harvests  in designated  seasons, often necessitating  closure of
the area  to harvests  in  other periods  in an effort  to  maximize  harvest and
avoid  overharvest.

     Commercial fisheries exist for salmon, bottomfish, oysters, clams, crab,
shrimp, and sea urchins.   Use  of  the area by hunters  and  fishermen  is often
quite  important  to  local   communities  in terms of  recreation or  vacation
dollars  spent.   Some  areas lend  themselves  more  to  one  type  of  harvesting
than  another.  Nearshore waters near  Sequim and open waters  throughout the
area  support  large  skiff  and  charter boat  fishing activities during major
salmon runs.   The waters near Dungeness Spit are important for Dungeness crab
harvest,  while  Discovery  Bay  is more  important  for  bottomfish and  clam
digging.  Intertidal harvesting of invertebrates  (e.g., clams)  is important
in  all protected unconsolidated  and rocky habitats.   Recreational fisheries
are important off rocky  shores.   A substantial harvest  of salmon,  crab, and
herring  dominates  the  commercial fishery  off  the cobble  shore at  Cherry
Point.

     It  is  difficult  to  set  a  standard for  assessing  the importance  of
harvesting  in a  localized  area.  Perhaps the  best approach  is  to list  all
known  recreational  and commercial  uses of the area  in question, the estimated
value  of  those  activities  (in   terms   of  dockside  value  for  commercial
fisheries  and  recreational dollars   for noncommercial  harvests),  and  an
estimate  of  the  effect  the  proposed  action might  have on  these  harvest
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activities.   It remains  a  subjective judgment of local  planners  whether the
risks  to  harvestable  resources  justifies  the  proposed action.   Washington
State resource agencies  have promulgated  various  criteria  for evaluating the
relative  importance  of  areas  to  clam  dredging,  aquaculture,  and  similar
activities.

V.  B.  2.  c.   Roosting,  resting,   hauling  out.   Many  marine  animals,
particularly  pinnipeds  and various  bird  species,  require  locations  for
hauling-out or  roosting.  Availability of  these  sites is limited,  yet  they
are  critical   to  maintenance  of  populations.    These  areas  appear  to  be
selected on bases  of  security  or  isolation from predation  and  disturbance,
and,  perhaps   secondarily,  for  protection  from weather  and  proximity  to
feeding  areas.   Many   intertidal/subtidal   beaches   and  rock   islets   are
important  hauling-out  sites   for   seals  and sea  lions.   Birds  roost  in
nearshore waters, bays,  and open water;  many rest  or roost on beaches  near
the shoreline.  While  there may be some  flexibility  or  opportunism shown in
site selection, there  is apparently considerable tradition  involved  in  site
preference and  populations or  local groups  may  be critically dependent  on
availability   of   specific   locations.    Only   a   small   group  of   bird
species—loons, grebes,  diving ducks, and  alcids—appear  to be able  to,  or
prefer to, remain on open  waters offshore during all  resting  cycles.   While
many  other  birds  (dabbling ducks,  for  example)  appear  to  rest on  water
surfaces,  they also  come  ashore  regularly  as do   seals  and  sea  lions.
Cormorants require both night  roosts  (often  available  only  at  considerable
distances from  foraging areas)  and  day  roosts near  foraging areas  for use
while drying and preening.  Gulls spend much  time on-shore betweeen foraging
periods, as do the pinnipeds.

     Criteria  for  measuring  importance  of  resting sites  are difficult  to
establish because  precise  population  sizes and  location  of  some  nighttime
roosts are unknown, and because of the difficulty in comparing the importance
of one species with  another.   In the study area, however, sites  used  by >25
harbor seals,  >10 sea lions, or >500 birds are noteworthy.

V. B. 2. d.  Rearing,  nursery.  Many habitats are  important  for  the rearing
and feeding of juveniles (Table 10).  Intertidal beaches of the area are used
by  many  species  of   fish,   particularly  in   the   estuaries.    Osmerids,
embiotocids,   and  salmonids,   for  example,  rear  juveniles  in  saltmarshes,
eelgrass beds, and along protected  beaches.   These  same beaches, as  well as
the bays, are used by  marine birds.   Open water is  important to  rearing some
birds and mammals;   however,  harbor seals  in the  study area are  primarily
raised on rock islets and gravel beaches.   Invertebrate larvae are ubiquitous
and no specific habitat  is  more important than any other; however,  juvenile
crabs and shrimps are often very abundant in protected mud/eelgrass habitats.

     The following types of sites  are important:  sites  where  reproductive
activity  takes  place  year-round;  sites  used year after year  by  specific
populations (e.g., harbor  seals);  sites where the  most  sensitive  life cycle
stages occur in abundance;  and sites where a reproductive product  (e.g.,  fish
larvae) is important  prey for  other animals.
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v- B'  2- e-  Migration.   All the intertidal/subtidal  habitat  types are used
by migrants, especially marine  birds which use them for resting, feeding, or
breeding (Table 10).   Sea lions use  rock islets  as  a result  of migrations
into the area.  Juvenile  salmonids are common  in nearshore waters off mixed
coarse beaches in  their  spring  outmigrations.  Open waters are important to
migrating whales,  marine birds,  and adult salmon.

     The importance of any given geographic  area,  such as a marsh,  bay,  or
passage,  is  judged by   the  importance  of   the  area   to  the  species  being
considered at the  time.   The importance  of  the area tc the species  is also
judged by whether  it  is  unique; that  is, if it  is  lost  can the individuals
under consideration easily  find another  suitable  area that is  not already
used to the limit  of its carrying capacity?

     Important sites  for migrants  are those  that are irreplaceable  in the
survival of a population, or provide  a critical  feeding,  breeding, resting,
or molting  area  that, if lost, would jeopardize a  population.   Important
sites are  those  that are used by many individuals  representing numerous
species or  a major portion of  the population  of a  single species.   Each
species must  be  looked at  individually at each  site  in  question and, then,
the species must be considered  in   total.  Total  species  populations must be
kept in mind at all times;  the  maximum annual total of all individuals that
utilize the area must be considered, not  just  the individuals  present at any
given time.

V. B.  2. f.   Reproduction.  Reproduction  among  the generally sedentary array
of benthic  organisms  occurs  wherever the adults happen  to  be distributed.
However, among  the marine  birds,  mammals,  and  fish,   reproduction is often
•limited  to  a much narrower habitat  when  compared  to the  distribution of
adults.   The critical habitat characteristic  for  river otters,  harbor seals,
and marine  birds   is  the  absence  of  human  and other mammal disturbance,
usually found on  small  islands.  Many marine fish  show  a  high  degree  of
habitat specificity.  The floating eggs  of  flatfish and  larvae of greenling
:(Hexagrammos spp.)  are  restricted  to the  near-surface  plankton.   Herring
spawning is  confined  in  this  region  to a  few, exposed  cobble  and gravel
beaches, while other species such as ling cod spawn at  specific subtidal rock
nest sites.

     The importance of exposed  unconsolidated rock  and  cobble  intertidal/
shallow subtidal habitats for reproduction is illustrated  in Table  10.  Sites
representing these habitat  types which are important  are  those which have a
demonstrable  association   with  specific  groups  or  species  reproductive
activities;  for example,  rock beaches and recurring  seal  pupping  (55 pups
per year); bird nesting  on upper intertidal  and  associated uplands of gravel
beaches and spits  (- 50 pairs per  year);  cobble  and other beaches  and major
herring spawning activities.

V.  B.  2.  g.   Foraging  and  predator-prey  interactions.   One of  the  most
important  factors  determining  the  extent  and structure  of  the  faunal
communities of a habitat is the amount of organic material or  energy passing
'through the  food  web.  The critical process in  the passage  of such trophic
energy is,  of course,  that  of feeding  or  foraging   by  one  organism  upon
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another.  Consumer  organisms  tend  to aggregate where  the  abundance and type
(size,  shape,  mobility) of  food organisms are  sufficient to  guarantee the
consumer enough energy for maintenance, growth, and  reproduction.   Thus, the
important   habitats  and  locations   are  those  that   support   dense  and
sought-after prey populations and active consumers.

     This  factor  is  important  at  all but two habitats.   We  have designated
habitats as important to foraging based upon both  the  relative abundance and
use  by  prey and  predators rather  than  upon the basis of the production of
food organisms alone, because both are important indicators of trophic energy
flow in the area.   The principal criteria determining habitat importance thus
include habitats  which:  (1)  are characterized by  high densities  of feeding
consumers,  (2) possess  unique  concentrations  of prey  organisms  which are
uncommon  in other  habitats,  or (3)  have populations  of organisms  which,
through  reproduction  or immigration,  are principally  responsible for the
recruitment of prey organisms important  in  adjacent  habitats.   Examples of
the  first  criteria  include  habitats which support  large  flocks  of feeding
Western Grebes or dense schools of  postlarval and juvenile Pacific herring.
One  example of the second criteria  would  be  a habitat which supports a high
standing  stock of  eelgrass,  which  is  fed upon  extensively  by  herbivorous
waterfowl  such as Black Brant.  An  example of  the third  criteria would be a
habitat in which Dungeness crab  spawn extensively and  provide an abundance of
larvae which  are  transported into neritic waters  where  they  are consumed by
planktivorous  fishes  such as juvenile Pacific salmon.

V.  B.  2.  h.  Detritus production, accumulation, and recycling.  As  Simenstad
et al.  (1979)  and  this  volume have illustrated,  virtually all of  the food
webs associated with  intertidal/subtidal habitats in northern Puget  Sound and
the  Strait  of  Juan de Fuca are  based primarily  upon detrital carbon.   While
we  have  little empirical data on the sources of the detritus which  enters or
becomes  available  in  these  habitats,  it probably  originates from benthic
macroalgae, eelgrass, saltmarsh plants,  and  river-borne  terrestrial plants.
The  fact that  the  community  structure  and  production of the biota  of the
region  are so dependent upon  these  detritus  sources,  and upon the  processes
which  make  the  detritus  available for  detritivores,   dictates   that  the
habitats involved are of primary importance.

     The   criteria   determining  relative  importance   to  overall  detritus
production  include  habitats  which:  (1) produce significant amounts of  algal
or plant biomass which  contribute to the detritus pool (shown  in  Table 10 as
important  for  plant biomass), (2) are primarily responsible for the physical
(mechanical) and biological  (microbial/chemical) reduction of  large  particles
to  the  sizes  utilizable by detritivores,  (3)  accumulate  detritus, making it
available  for  accelerated processing,  and   (4)  are  characterized by  high
densities  of   detritivores or other detritus-processing  fauna.   As shown in
Table   10,   the  protected  habitats  having  a   major   mud  component  are
instrumental in detritus cycling.

V.  B. 2. i.  Benthic  faunal biomass.  Although for the region  as  a whole the
biomass of  marine mammals, birds, and fish is substantial, when expressed per
square meter it is  very  small  for all three faunal groups.  However, in some
habitats  the  biomass or standing stock  of benthic animals can be very high.


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In mud,  mud-gravel, rock,  and  cobble habitats (Table 10), the benthic faunal
biomass  can exceed  1 or  2 kg/m2.   The animals  responsible  for  this  high
biomass  are primarily infaunal  clams and epifaunal mussels and barnacles, all
animals  with  heavy  shells.   Mussel  beds  can  create  thick  multispecies
assemblages on  rock  and  cobble  habitats,  thus  adding  a three-dimensional
component  to communities at  these habitats.  Sties with  frequently observed
(several years, each  season)  faunal  biomass values  in excess  of 500 g wet
weight per square  meter  should  be considered as important.

V. B. 2.  j.   Biomass of plants.   As  shown in Table  10  plants are primarily
important  in evaluating  rock, cobble, and  protected unconsolidated habitats.
In benthic communities macroalgae can be important at  rock and cobble sites
and eelgrass important in  protected  unsolidated  sites.   First,  they modify
the character  of  the  habitat in several important ways.  Stands of algae and
eelgrass reduce wave and current shock felt by the animal species residing in
them.   In  eelgrass  beds,  the  release of  oxygen during  photosynthesis may
moderate local  conditions  of   low oxygen.   Also,  intertidal  algae  retain
moisture  during   low  tides,   moderating  fluctuations   in   salinity  and
temperature which occur on bare  substrates.   The  presence of  algae  adds a
.third dimension  to  rock  surfaces,  which  invariably  results  in a  large
increase in species richness .

     Macroalgae and eelgrass provide  a major source of organic carbon to the
marine system.   This carbon is  used directly by macroalgal grazers, and also
indirectly, as  detritus, by scavengers and detritivorous species.

     Few  local  data  on  productivity  per  se  are  available,  either  for
rmacroalgae or  eelgrass,  though Webber  (1981) provided  growth rate data for
two species.  Therefore, standing stock of  plants  is  taken here  as  a very
rough indicator of  production.   Mean yearly values  of  plant  standing stock
ranged   from less  than  1  g/m 2 to  over  30 kg/m2  at  the  MESA  study  sites.
:Values on  the  order of 1  to 10  kg/m2 were typical of the low intertidal zones
jof rock  and cobble substrata, where algal cover is  at  least seasonally high.
Subtidal sites  with appreciable macroalgal or eelgrass stands  also had values
in that  range.   Wet weight  of about 1 kg/m 2or greater can be  used as a rough
Criterion  of importance, but factors such as patchiness, seasonal patterns of
abundance,  and distribution  of plants with elevation should also be consid-
;,V. B.  3.   Factors important in evaluating each habitat type.

V. B.  3.  a.   Intertidal/subtidal zone.

V. B.  3. a.  (1)   Intertidal/subtidal:  exposed  mixed coarse.   This habitat
;can be  important  for  foraging,  reproduction,  rearing,  roosting, use  by
migrant  species,  and  for  nonharvesting recreational  use (Table  10).   This
habitat  type is  characterized by high wave and/or current action, which often
^results  in large movements of sediments.
s..              °

r    Dungeness  Spit   on  the  Olympic  Peninsula  exemplifies  many  of  the
^important  features of  his habitat.  Both phytoplankton and  detritus form the
iase of  the food  web  at this site.  Macrobenthos standing stock at Dungeness
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Spit was  among the  lowest  at any  of the study sites  (Nyblade,  1979a),  but
epibenthic zooplankton densities were not among the lowest  compared to other
sites  (Simenstad  et al. 1980).   Macrobenthos  at other  exposed mixed coarse
sites  may occasionally  be dense.   At  Ebey's  Landing, for   instance,  the
intertidal  region  supported   a  phenomenal  explosion  of  Paramoera  sp.,  a
gammarid  amphipod,  in  late spring  and  early  summer,  when numbers reached
100,000/m2.

     Large  populations   of  migrating  fish  in  nearshore  waters   feed  upon
zooplankton associated  with subtidal  sediments.   The availability of food in
proximity  to  relatively  undisturbed  shoreline  makes  Dungeness  Spit  an
attractive roosting  site for  birds  during all seasons, with large numbers of
migrants  like  California and  Heerman's Gulls  included  in  the  fall.  Harbor
seals  often  find this  habitat suitable  for hauling out, due  to  the minimum
amount  of disturbance  and proximity  to  prey.   The  mixed  coarse exposed
beaches of Protection Island  and Smith-Minor  Islands are often important to
seals as hauling-out and pupping sites.

     Recreational   use   is   important    year-round   at  Dungeness   Spit.
Beachcombing, bird-watching, photography, and  educational activities are all
important.

V. B.  3.  a.  (2)  Intertidal/subtidal;  sand.   Importance factors  identified
at  this  habitat  include nonharvesting  recreation, migration,  rearing,  and
reproduction  (Table  10).   Sites  identified  as  showing  these  importance
factors include West Beach and Eagle Cove.

     The  use of the sites by  migratory birds  is similar to other habitats;
that  is,  there  is  usually  an increase  in numbers of  species in  fall  and
winter  seasons.    Shorebirds,   gulls,  and   ducks   (including  Goldeneyes,
Buffleheads,  Oldsquaw,  and  Harlequins)   are  important migratory  species.
Other migratory birds include the Common Tern and the  White-winged Scoter.
Seals and some birds may use this habitat type for reproduction.

     The  sand  type of  the  exposed unconsolidated  habitat  is  important  for
recreational uses at some sites.  Although bird diversity (and, consequently,
bird-watching) is lower  than  at  other habitats,  the use of sand  beaches for
recreation  is  extremely important.   The frequent  occurrence of  backshore
dunes  and  the  relative  uniformity  of  the  sand  substrate  through  the
intertidal  and  shallow subtidal  zones   makes this  habitat attractive  for
sunbathing, swimming, wading,  and beach walking.

V. B. 3. a. (3)  Intertidal/subtidal;   mud-gravel.   Of the importance factors
found  in  this  type of habitat, perhaps the  most noteworthy are  the benthic
animal  biomass  and sport and commercial harvesting.   Hard shell  clams  are
responsible for both of  these importance factors.   Clam biomasses  of  over
8,000 g/m  have been reported for Webb Camp on Westcott Bay (Nyblade, 1977).
Mud-gravel beaches  are  the hard shell clam beaches  throughout  the region.
Sport and commercial harvests represent a multimillion dollar industry in the
region.
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     Other  factors  important in this habitat are high  plant  biomass (chiefly
Zostera marina in  subtidal  zones),  high detritus  accumulation and recycling
(Simenstad  et al.,  1979), high  levels  of foraging and  rearing of young,  and
high use by migrants.   The food webs  of mud-gravel  habitats are  based  on
phytoplankton  and   especially  detritus.   The  detritus  supports  a  large
community of epibenthic  and planktonic crustaceans (Simenstad et al., 1980),
which,  in turn, are  critical food sources for  larval  fish.   These habitats
can be  crucial nursery  areas  for a large number  of  fish species, including
several species of flatfish,  sculpin,  and  salmon.   The  eelgrass  of  these
habitats is a vital  food  resource  of  the  Black  Brant  and  Wigeon.   In
addition, the  calm waters of the embayments where these habitats  are  found
are very important  stopover  points for migratory marine birds.

V.  B.   3.  a.  (4)    Intertidal/subtidal;   mud-sand.   Numerous  factors  of
importance  are  associated  with  the mud-sand habitat,  most  notably rearing,
foraging, and  detritus accumulation;  only reproduction  and  benthic  faunal
biomass are relatively unimportant  compared to the other intertidal/subtidal
habitats.  Benthic infauna  may be  abundant,  but, due to their  small  size,
they often do  not  account  for high biomass values.  Epibenthic organisms can
be quite prominent,  especially in  association  with eelgrass  (Zostera  spp.)
beds which  are often dense  in  the more  protected  areas  of  the habitat.
Perhaps as a result^ of  the  linkages to  epibenthic  crustaceans,  there  is a
coincident   abundance of predatory  juvenile  flatfish, cottids,  and various
shorebirds,  characterizing   the  middle   trophic   level  consumer  organisms.
Herbivorous birds  (Black Brant, Wigeon) are also commonly associated with the
eelgrass beds during periods of their migration through the  region or during
overwintering.

     Several locations exemplify  the  intertidal/subtidal  mud-sand habitats,
including Birch Bay and Jamestown.  These two sites represent  the extremes of
this habitat.  Birch  Bay is the  more  exposed  with coarse sand sediments  in
many  places,  sand waves,  and  sparse  eelgrass   beds,  while  Jamestown  has
sediments with more fines and some extensive, dense eelgrass beds.

     Simenstad  et  al.  (1980)  illustrated that the  Jamestown/Port Williams
site had the highest number of  taxa, density, and  standing crop of epibenthic
zooplankton  at seven habitats  sampled along  the  Strait  of  Juan de Fuca in
August  1978.   Harpacticoid  copepods,  which are  the principal  prey of many
juvenile fishes rearing in this habitat, were the  epibenthic crustacean which
dominated the composition of this community.  These organisms  were associated
with the dense eelgrass beds and  macroalgae found  at this site.

     Demersal  fish  communities are  typically  of  intermediate diversity and
standing stock between  more  exposed  habitats  and  the  more  protected  mud
habitat.   But, like  the  mud habitat,  juvenile forms  of  many  species,
including English  sole,  sand  sole, salmon, and   staghorn sculpin,  can form
much of  the  demersal fish  community in  this  habitat during  the  late spring
and summer.  The apparent  association between these  juvenile fishes and the
eelgrass  beds   and  their   abundant  epibenthic  zooplankton   communities  is
considered to  be a function of  the  accumulations  of detritus, abundant prey
resources,  and refuge from predation.
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     Bird communities,  composed  primarily of Glaucous-winged Gulls, American
Wigeon, Black Brant, and Bufflehead Ducks, were typically  the  largest of any
habitat, especially  in  fall and winter months when migrant and overwintering
waterfowl  foraged and  roosted  there.   Black  Brant  represent  the  extreme
example; at  their peak  residency in April over 1,500 brant were observed in
the Jamestown area in 1978-1979.

     Commercial  and  recreational harvesting of infaunal  bivalves  and mobile
macroinvertebrates  such as  Dungeness  crab  and  shrimp  is common  in  this
habitat  as  is the  recreational hunting  of  Black Brant  and other waterfowl
during  the  fall  months.   Nonharvesting  uses  are  typically  restricted  to
bird-watching and beachcombing.

V.  B.   3.  a.  (5)    Intertidal/subtidal:   mud.   Factors  that  are  important
include  high levels  of plant biomass production  (particularly of  eelgrass),
benthic  faunal biomass,  detritus accumulation,  foraging  activities,  rearing
of   young    marine    organisms,   migrants,   roosting,   and   harvesting.
Interrelationships of  factors like  these, particularly  detritus,  eelgrass,
and  benthic  organisms,  are  often  reflected  in high  species  richness  and
seasonal standing stock levels among many  biotic  groups.   Bottom-feeding and
grazing  species   of  birds  like  Black  Brant and  American Wigeon  are often
abundant.  This is one of the principal habitats for shorebirds, and  at some
sites  it supports the  study area's highest densities of  Great Blue Herons
which feed upon fish.  The protected mud habitats  are important  for foraging
by  migrating birds, and are  often  used by birds  for roosting and by harbor
seals for  hauling out.  Harvesting  of  crabs and  bivalves can  be important
here.

     Padilla  Bay is  an example of this habitat  type.  Eelgrass beds there are
among  the  most  extensive  on the Pacific Coast, and this floral biomass, in
turn,  often  attracts  up  to 50,000  Black  Brant   during  spring  migration.
Likewise,  wintering  flocks  of  American Wigeon are  among the  largest in the
northwest Washington-southwest British Columbia region.   Large quantities of
detritus accumulate  within the habitat, and areas  like Padilla  Bay may also
supply  nutrients to adjacent  areas  through eelgrass  detritus  drift.   In
addition   to  grazers,  large   numbers   of   dabbling  ducks—scaup,   Common
Goldeneyes,   Buffleheads  and  scoters—winter  in  Padilla  Bay.    Seasonal
densities  and biomass ,of birds  are usually greatest  in winter, though spring
biomass  is relatively high  due to the major movement of  Black Brant  through
this habitat.  Glaucous-winged Gulls, which nest on  dredge-spoil islands west
of  the  Swinomish Channel,  and  large numbers   of  migrant  Bonaparte's,  Mew,
Ring-billed  and  California  Gulls  forage  on exposed intertidal  areas,  as do
seasonally  large  flocks  of  shorebirds,  primarily  Black-bellied  Plovers,
Western  Sandpipers,  and  Dunlins.   Concentrations   of  up to  300  Great Blue
Herons observed foraging in Padilla Bay (Manuwal et  al.,  1979)  were among the
highest  counts recorded in the study area.

     Padilla  Bay  serves  as a rearing area for invertebrate species.   While
fish species  like salmon inhabit the nearshore water  column, the productivity
of  the  subtidal-intertidal  zone is  reflected  in  the  concentrations  of
epibenthic-feeding juvenile chum salmon in Padilla Bay.
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    Large  numbers of birds  roost on the exposed intertidal areas and on the
water  surface of Padilla Bay.  Harbor  seals  haul out at low  tidal stages on
banks  of channels at  several locations in Padilla  Bay,  where Everitt et al.
(1970)  observed a maximum of about 70.   The area is used for pupping also.

    Harvesting of Dungeness  crabs  and bivalves is conducted on an important
scale,  and  sport-hunting of  waterfowl  is  a  major  recreational  harvesting
activity at Padilla Bay.

    Many features  of Padilla Bay  are  duplicated,  on a  smaller  scale,  at
similar habitats  at Samish  Bay,  Lummi  Bay,  Birch Bay, Drayton Harbor, and
other  locations.   There are  some  differences  evident  in this   intertidal/
subtidal type at  other  locations  like the Nooksack Delta  in Bellingham Bay,
or at  the  Skagit  Delta  (south of Padilla Bay  and  outside the  study area),
where  large  river  inflows  lower the  salinity  of  the bays  and  predominent
vegetation  shifts from  eelgrass  to  brackish  marsh plants  like bulrushes
(Scirpus).  sedges  (Carex),  and arrowgrass (Triglochin).   There  is also some
shift  in faunal  species related  to vegetation.   While Padilla  Bay supports
one of  the largest Black  Brant   concentrations  in North  America during the
spring migration, very  few  Snow  Geese or swans  are  observed  foraging here.
The Skagit  Delta is  a  major wintering  ground  for  Snow  Geese and Whistling
Swans.

V. B.  3.  a.   (6)   Intertidal/subtidal;   exposed  rock.   Nearly  all of the
importance  factors described for  the study area  are important to this habitat
type with  the  exception of  detritus  buildup  and use  of the habitat  as  a
rearing or  nursery area.  These two factors are  eliminated by the  exposure of
this habitat to  full  tidal,  wave, and swell  forces which effectively remove
any detritus materials  and  make  the area unsuitable for  fragile juveniles.
Dominant organisms  in this  habitat include large,  dense  attached algae and
invertebrates.   This habitat  can  be important  for  roosting  and  breeding by
birds  and hauling out by harbor  seals and migratory  sea lions at  some sites.
Little  harbor  seal  reproduction  is  associated  with   this  habitat,  but
invertebrates  and  fish  often  reproduce  there.    Harvesting  of  mussels,
urchins, and fish can be important; and  photography, sightseeing, and tide-
pooling are common recreational activities.

    Tongue Point is  an example   of  an exposed  rock habitat for  which data
were  collected  during   the  MESA program.   The  benthos  of  this  area was
composed primarily  of macroalgae,  gastropods,  barnacles,  and  mussels.   The
occurrence  of these organisms was extremely patchy,  though  there was little
variation  from  season  to  season.   Marine  birds  occurred  in  low nubmers,
dominated by Glaucous-winged  Gulls.   No recent  fish  data  are available from
this  site  and  no  marine  mammals  were  observed  that   could  be  directly
associated  with this site.   Race Rocks are very  important  to harbor seals and
sea lions for hauling out and, in the case of harbor  seals, for pup rearing.

    The Tongue Point area is important as a foraging area for top carnivores
in the study area, including river otters, seals, cormorants; reproduction of
benthic  epifauna  is also important.   Many of  the birds  reported from this
area were  seasonal  migrants.  Aerial  shoreline  censuses  in  the  rock  area
between Tongue Point  and Observatory Point recorded  relatively low densities


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of birds,  though large  numbers of  gulls  were occasionally  observed during
migrations and winter.

     Harvesting  by  recreationalists  is  limited  to  collection  of  mussels,
though some surf and  spear  fishing may  occur.   Tongue Point is attractive to
nonconsumptive  users  who  may  find  the wild  coastline  and  dramatic  surf
appealing.  Beachcombing, photography,  tidepool observing, and bird-watching
can provide satisfactory diversions to the vacationer.

V. B.  3.  a.  (7)  Intertidal/gubtidal!   protected  rock.   All  of  the factors
that  make  exposed  rock  sites  important   also  apply to  protected  rock.
Rearing,  in  addition, can be  important  as  harbor  seals and  some  birds use
protected rocks in the San Juan Islands for  the rearing of young.  Macroalgae
and  dense,  shelled  invertebrates contribute  to  a high  algal  and benthic
faunal  biomass  at   important  areas.    Foraging  by   nearshore   fishes,
reproduction and rearing  by harbor  seals   and  some birds,  hauling  out  by
harbor seals and migratory sea lions, harvesting of invertebrates and fishes,
and recreation can be important.

     Point  George  and  Fidalgo Head  are  examples  of this  habitat  type.
Numerous  molluscs  (mainly  gastropods),  crabs,  and  echinoderms  were  found on
subtidal  rock at Point  George,  which is a biological research preserve.  The
kelps Alaria and Nereocystis were common there, as were intertidal fishes.

     Harbor  seal pupping activity may  result  in  10 to 30%  of a population
consisting of pups on protected rocks.  Northern sea lions are often found on
protected rocks  in the San  Juan  Islands;  they are  among  the most  important
migrants  to  use  this habitat.   Various ducks,  scoters,  alcids,  and gulls
frequent  important  protected  rock  habitats   during  their  migrations  and
foraging activities.

     Harvesting  of  kelp  bed fishes,  mussels, and  urchins  occurs where these
resources   are   dense.    Recreational   activities   such  as  sightseeing,
photography, and educational field trips are common.

V. B. 3. a. (8)  Intertidal/subtidal;  cobble.  This habitat at some sites is
important  to  harvesting and nonharvesting  activities,  roosting, migration,
rearing,  foraging,  and  reproduction of  benthic  faunal  biomass and  algal
biomass.  The cobble nature of the bottom  allows  for the  attachment of many
organisms  which,  in  turn,  provide habitat   and   living space  for  other
organisms.

     Cobble beaches are at  times utilized  by  birds,  especially  gulls,  for
roosting.  Harbor  seals also utilize this  habitat for  hauling out.  During
their migrations,  gulls  and ducks use  this habitat for short  stays to feed
and roost.

     At the  Cherry Point site,  annual  spawning of  Pacific  herring attracts
commercial harvesting  operations  in  adjacent nearshore  waters in the spring.
This spawn, a very  large one, also attracts large  numbers  of  birds that feed
upon  the  eggs.   Fish  are also  attracted  to  the  large  volume  of  food
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available.  Birds  attracted to the spawn include large numbers of scoters and
gulls.

    The  algal and invertebrate  benthic biomass measured at  Morse  Creek was
consistently  among the highest of any of the sites.  Nyblade  (1979a) observed
up to  15,000 organisms/m*- and over  3,000  g/nr at  the 0'  tidal elevation.
Barnacles,  molluscs,  and macroalgae were dominant.   Intertidal fish density,
species richness,  and abundance among the Morse Creek cobbles were comparable
to those of  other sites  (Miller et  al.,  1980).   Harvesting  of intertidal
invertebrates  and fishes   takes  place  at  Morse  Creek and  Cherry  Point.
Subtidal  commercial crabbing occurs at Cherry Point.  Educational field trips
and recreation are common due, in part, to the abundance of marine organisms.

V. B.  3.  b.  Nearshore.

V. B.  3.  b.   (1)   Nearshore;  exposed mixed  coarse.   Migration and roosting
are  important  uses  of  this  habitat  for  many  fish  and bird  species,
respectively.   Substantial  seasonal  migrations  of both adult and juvenile
salmonids occur.  Large concentrations of Pacific  herring  and sand lance are
common.  Fish  densities   at Dungeness  Spit,  for  example,  were  among the
highest found at any of the  sites.

     Many  bird  species  migrate  through  this  habitat  in  large numbers.
California,  Bonaparte's,   and  Heermann's  Gulls,  Bufflehead,  Surf Scoters,
Rhinoceros Auklet, Common  Murres, various loons,  and cormorants all use the
area during migration.  The  alcids, loons, and  cormorants may spend more  time
in deeper  water  offshore  during migration.   Gulls and alcids roost on the
water in this habitat, although alcids may prefer  deeper water,  and the  gulls
may roost on nearby exposed  beaches much of  the time.

V. B.  3. b.  (2)  Nearshore:   sand.   Importance  factors  recognized for  this
habitat  include migration  and foraging (Table  10).   West  Beach is one  site
having these characteristics.

     As  with  other  habitats, bird  species  are  important  migrants.   Some
species (i.e.,  the Mew and  Thayer's Gulls) are  only commonly  found in spring
and fall during their northerly  and  southerly  migrations.   Other species are
commonly found  during  fall  and winter and move  north or inland  in  spring and
summer.  Species having this type of  migration  include Western Grebes, loons,
cormorants, alcids, and mergansers.

     Fish  species are  also  important  migrants.   Juvenile pink and chum salmon
are  found  in  the nearshore waters  of  the  sand  habitat   during spring and
summer.  Adult  Pacific herring are  found  from  December to  June preparing for
reproduction.  Juvenile herring  are  common  in  the  summer  and  move offshore
during the fall.

     The use of this habitat for foraging  has been noted for birds, mammals,
and  fish.   Both  harbor porpoises  and killer  whales  can be  expected to use
this  habitat  for feeding.   Birds  seasonally   foraging  include  the  Horned
Grebe,  Arctic  Loon,   and  Common Murre.   Juvenile Pacific  cod may be  found
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feeding during their first year.   Adult  spiny dogfish, ratfish, and some cod
may move into this habitat at night to feed.

     Two  important  juvenile  fish  seasonally  forage  off Eagle  Cove (Miller
et al.,  1978).    Pink   salmon are  abundant  from  June  to  August,  feeding
primarily on calanoid copepods, harpacticoid copepods, and gammrid amphipods.
Silver salmon may be found  commonly from April  to  October  feeding primarily
on  drift  insects,  although  zooplankton   (i.e.,  zoea  and  megalops)  and
epibenthos (i.e., gammarid amphipods) are also used for food.

V. B.  3.  b.  (3)   Nearshore:  mud-gravel.   Mud-gravel habitats are typically
found  along  the  sides of  large  embayraents,  such  as at  Beckett  Point  in
Discovery Bay and  in  small  embayments, such as  Webb  Camp in Westcott Bay on
San  Juan  Island.   The  nearshore  area  of  these  mud-gravel habitats may  be
important for roosting,  rearing, and foraging  (Table 10).   The water column
is a rich foraging area for nearshore fish,  seabirds,  and mammals.

     The  high primary productivity  of  these  embayments  may  support  high
secondary  production  of  nearshore  zooplankton  in  important  sites.   This
community, in turn,  serves  as the food  resource for rearing postlarval sand
lance,  surf   smelt,  and  herring.   Fish-eating  birds  (grebes,  guillemots,
cormorants,  loons)  and harbor seals are  supported  by rich  secondary produc-
tion.

     Some  large  embayments  such  as  Discovery  Bay  serve as  very important
roosting  areas   for  a   variety  and  high density  of  migratory  and resident
marine  birds.   Manuwal  et  al.  (1979)  found  up  to  9,000 birds  roosting  in
Discovery Bay.

V.  B.   3.  b.  (4)   Nearshore;   mud-sand.   Important characterisics of the
nearshore  waters at  the mud-sand  habitat include  roosting,  rearing, and
foraging.  As  described for  the  intertidal/subtidal habitats, the nearshore
waters  associated   with  mud-sand  habitats   characteristically  occur  in
semiprotected  regions  of  embayments.   The  importance of  this  nearshore
habitat is associated  with  characteristics  common to all embayments.  Due to
the  usually   increased  water  stability  and  nutrient sources  entering such
embayments,  the  water  column primary  productivity  tends  to be  higher and
occur  earlier in the year than in colder, more mixed  water masses.  Detritus
sources in  the mar£h,  riverine,  and eelgrass habitats  common to  embayments
also tend to contribute to this  increased productivity through the  generation
of   dissolved  organics  and   other   nutrients  important  to  phytoplankton
production.   This  increased  primary  production is  directly linked  to the
secondary  production of  neritic zooplankton, which, in turn,  support high
standing  stocks  of  consumers  during  certain times of  the year.  This linkage
results   in  a   distinctive   association  of  zooplankton-eating  fishes and
fish-eating  seabirds which  forage and rear their young in this habitat from
winter  through late spring and early summer.   Postlarval  and juvenile Pacific
herring,  surf   smelt,  and   Pacific   sand   lance  constitute  the  principal
zooplankton-eating  fishes which  are  observed to aggregate in  these habitats,
especially when  they are in proximity  to  the intertidal/subtidal mud-sand and
eelgrass  habitats  where reproduction  of these  species occurs.  Fish-eating
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birds  common  to  this  habitat  include  Western  and  Horned  Grebes,  Pigeon
Guillemot,  Pelagic Cormorant, and Common Loon.

    The  neritic waters adjacent to the Jamestown site provide  an  example of
the nearshore mud-sand habitat.   Catches of postlarval Pacific herring, surf
smelt,  and  Pacific sand  lance  as high  as  0.65,  0.09,  and  0.05  fish/m3,
respectively,  were documented  in spring tow net collections at Port Williams
(Miller  et al.,  1980).   The most  prevalent  fish-eaters   in   the  Jamestown
region  during spring were Western Grebes and Red-breasted Mergansers.   Bird
densities of 1,000 to  2,000 birds/km2  and  projected total  counts of  up to
46,000 birds roosting  or swimming in the Jamestown subregion were recorded in
winter  (Wahl et al.,   1981).   In  early summer,  Pigeon Guillemots  occurred
prominently in  the region  and  may be  directly associated with the habitat
through  their foraging upon sand lance migrating through  the  neritic waters
adjacent  to the  intertidal/subtidal eelgrass beds.  Foraging by seals on fish
was important  at Jamestown.

V. B. 3.  b.  (5)   Nearshore;  mud.  Important characteristics of the nearshore
waters  of protected, mud  habitats include foraging by  many species,  rearing
of young fish,  and use  by  birds  for  roosting.  Many  of  the  processes and
activities  taking place  in  the  water column  relate  both  to  the  relatively
protected nature  of  embayments  and  the productivity  of  underlying subtidal
and intertidal habitats.

    This mud-eelgrass-detritus trophic base supports abundant plankton which
are prey  for a wide range of small fish, including many  resident and migrant
species,  particularly  juvenile  chum  salmon.   This trophic base may, in turn,
support  sizable  populations of  fish-eating  harbor seals  and  birds  such as
loons,  cormorants, mergansers,  .and opportunistic gulls in important areas.
Water-column plankton  include  larvae  of many benthic forms,  and  concentra-
tions of  drifting larval forms of fish, barnacles, and other organisms.

    Padilla Bay  exemplifies   this  habitat  type  in  the study  area.   In
addition  to large  populations  of resident fish species, its nearshore waters
serve  as  rearing habitats  for juvenile salmonids, Pacific herring,  and sand
lance,  and  as  winter  foraging  habitat  for  large  numbers  of  Common  and
Red-throated Loons, Red-necked,  Horned and  Western Grebes,  Double-crested
Cormorants,  and  Red-breasted Mergansers.   The winter  average of  about  300
Double-crested   Cormorants  (Manuwal   et al.,   1979)  represents  one  of  the
largest  foraging concentrations  of the species in the study area.   Groups of
up to 70  harbor  seals  (Everitt et al.,  1980) observed hauled out at low tidal
stages  in Padilla Bay  presumably also forage at least part of the time in the
water column here.

    The  nearshore  habitat  is  important as  a roosting  area  for  the  birds
discussed above, and also for thousands of ducks and geese which are resident
from fall  through  spring.   Average  winter flocks of about 80,000 waterfowl
which forage in  intertidal/subtidal habitats also rest on  the  surface of the
bay.  Because  seasonal  averages understate presence of species showing abrupt
occurrence  peaks, the  spring season  estimate given in Manuwal  et  al.  (1979)
does not  truly  reflect  the importance  of Padilla Bay  in this season when up
to 50,000 Black  Brant may be present at one time.   Padilla Bay thus serves as
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an important roost both  for  birds using the nearshore  wawter  column and for
birds  using intertidal/shallow  subtidal  foraging  habitats.   This roosting
activity  is likely  due  to  the  high  degree  of protection  offered  in the
embayment from effects of weather, security from predation, and minimal human
disturbance (likely due in part to shallow water depths).

V.  B.  3.  b.  (6)   Nearshore;   exposed  rock.   Because  of  the  limited
information on this habitat, only a few  important factors were identified as
being  significant  in this  habitat.  They include:  foraging, harvesting, and
nonharvesting (nonconsumptive use).

     An  example  of  nearshore  exposed  rock  for  which recent  biological
information has been collected is Pillar Point.  This  area has limited value
as a  roosting  area and bird densities  are quite low.  Manuwal et al. (1979)
reported densities  for  all species of  less  than 200  birds/km2 for  the sub-
region along the coast that includes Pillar Point.  Foraging nearshore fishes
were  abundant  in  tow   net  catches,  dominated  by  Pacific   herring.   Fish
densities  were greatest  in summer months (1.66/m3)   (Miller  et  al.,  1980).
This abundance and diversity of fishes may make  sites  such as  this important
foraging areas  for marine  mammals.  However,  few marine mammals  records are
available for this site.

     Recreational  sport fishing  undoubtedly constitutes  the  most important
human  use of this  habitat though  diving and  surf fishing may  also  occur.
Nonconsumptive  uses include photography  and  bird-watching.   This portion of
the Olympic Peninsula attracts many vacationers.

V. B.  3. b.  (7)   Nearshore;  protected  rock.   The nearshore protected rock
habitat may be  important  for  the same  factors at exposed  rock:  foraging,
harvesting, and recreational activities.   These factors  are  related to the
rock/kelp bed physical  structure  and to the  relatively low wave  and current
action.

     Point  George is a  site representative  of this  habitat  type.   Miller
et al.  (1978)  showed that  fish densities there were relatively high (mean of
0.29 fish/m3) in tow net catches.  Mean  standing crop values were relatively
high  also, but  were lower than  those at  protected  mud-eelgrass habitats,
reflecting  the small size  of the dominant  species at  Point George.  Foraging
by sand  lance,  Pacific  herring, and kelp  bed fishes  appears  to be important
at this site.

     Harvesting  of  kelp  bed  fishes  such as  sea  perch and  greenlings  by
hook-and-line  and diver can  be important  at protected  rock  sites  such  as
Point  George.   Many of  the species found at this habitat  type avoid tow nets
and  thus   do  not  appear in  catch   statistics.   Nevertheless,  they  are
attractive  to  fishermen.   Nonharvesting  recreational  activities such  as
sightseeing, diving,  and photography may be  important at sites  having this
habitat type.

V.  B.  3.  b.   (8)   Nearshore;   cobble.   This  habitat  is  important  for
harvesting  and nonharvesting activities, roosting,  rearing, and foraging.  An
example of  this habitat  type is Cherry Point.


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    As  for  the intertidal/subtidal  cobble  example,  the annual herring spawn
is of significance  at  some  sites  having this habitat.   Part of  this  spawn  is
harvested in nearshore waters by  commercial  fishermen, while the bulk is left
to develop or  to be eaten by various predators, including  fish,  scoters,  and
gulls.   Other  diving birds  are often associated with the feeding activities.
These  include, especially in  the winter,  loons, grebes, alcids,  and cormor-
ants.   Gulls  are always  found in the  area, but are  confined  to  the surface
layer of the water  column in their feeding activities.

    The nearshore  waters  of cobble beaches are foraged  by seals  and often
used  for roosting  by  various diving ducks, gulls,  and other  diving  birds.
These birds often spend  the night on the water.

    The foraging   activities  of  nearshore  fishes  such  as   herring  were
reflected  in  the  relatively high  tow net  catches  at  Cherry  Point.  Though
highly variable and seasonal, tow net catches there averaged 0.05 fish/m  and
0.13  g/m3 with some  catches exceeding 2.6 fish/m   and  5.6 g/m   in  summer
(Miller  et al., 1978).  The dominant species was Pacific herring.

    Rearing   of  the  herring that  hatched  nearby  constitutes  an  important
activity in   some   sites,  including  Cherry  Point.   The  major  harvesting
activities  are  related  to  the herring and  salmon populations  at this site,
while  recreational  activities include boating and sightseeing.

V. B.  3. c.  Offshore

V. B.  3. c.  (1)  Offshore;   broad passages.   Activities that can be important
in this  habitat are  foraging,  migration,   rearing,   and  harvesting.   Since
emphasis in the  MESA and  WDOE  studies  was on  the  intertidal/subtidal  and
nearshore habitats, little data exist for this habitat.

    Admiralty Inlet exemplifies  the broad  passage  habitat.  Admiralty Inlet
is a broad passage  and it marks the water exchange area between central Puget
Sound  and the  Strait  of  Juan de Fuca,   It   is  often marked by  strong tidal
currents and convergences with obvious turbulence.

     Commercial harvesting  and   sport harvesting  of  salmon  is  a  common
activity in the passage area.   Summer run  king salmon are captured by gill
net and purse  seine.  Blackmouth (resident  chinook  salmon) and  coho salmon
are also pursued by sports fishermen.

     Because this is the passage between two major water  systems,  it is the
scene   of  migrations  within the  study  area  and  between  other Washington
waters.   Birds commonly fly up and  down the passage  as they change areas of
foraging activity.   During  the   summer months  Rhinoceros  Auklets  are seen
flying daily through the passage.  Marine mammals such  as  harbor  seal, Ball's
porpoise,  and  killer whale utilize the area for passage to and  from  the Puget
Sound central  basin.  On a larger scale, birds passing  through  the study area
on migration are noted in the passage  seasonally.

     Foraging   by birds  commonly is observed  in the  passage,  especially by
large feeding  flocks  consisting  of  alcids,  gulls,  and cormorants,  which are
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often seen associated with  the tidal fronts.  The activity of these birds is
constantly changing as  the  currents ebb and flow  in the  passage.   Foraging
activity by migratory salmon and predatory mammals  such  as  killer whales is
important in this area.

     Some  larval  stages  of  fish  which  occupy  intertidal  and  nearshors
habitats as adults are reared in these waters as members  of  the near-surface
ichthyoplankton.  Some marine mammal juveniles can be abundant there.

V. B. 3. c.  (2)   Offshore;   narrow passages.  Karrow passage  habitats often
feature  very  strong  tidal   currents,  and  factors  cf  importance relate  to
concentrations of plankton  borne by currents and  on nekton.   Plant (phyto-
plankton)  biomass,  foraging,  migration,  and  harvesting  can be  important.
Some of  the  highest observed  densities of  foraging birds within the study
area were recorded  in  this  habitat, though  it is  dramatically apparent that
foraging activity varies  greatly,  depending  on tidal   stage  and  season.
Densities and estimated  populations given in Manuwal et  al.  (1979)  are mean
seasonal averages  and do not represent  peak usage which  may be  100-200%
greater.  In addition, concentrations of sea lions are often observed in this
habitat type.

     Because of  their  biological features, narrow passages  are important to
migrating fish, mammals,  and birds, in addition  to  resident  animal popula-
tions.   The  concentrations   of many species are related  to  tidal  stage and.,
thus, are recurring features; and they  consistently  attract  predator species
which migrate  through the  study area or winter there.   The narrow  passages
are also notably  important  for one  popular form  of harvesting recreation—
sport-fishing for salmon.   Food  webs are structured around phytoplankton and
productivity may be very high in these passages; advection of prey animals by
tidal contents may also be responsible for pelagic plankton-eating concentra-
tions in this habitat.

     Speiden  Channel  and Active Pass  illustrate the  biological  importance
features of narrow  passage  habitats and  also  variations  between  these pas-
sages.   Speiden Channel's  offshore waters  (>20 m  depth) had  highest bird
densities in fall (89.0/km2) when migrating small  gulls and terns represented
most birds present, and in  winter  (84.8/knr) when loons, cormorants,  gulls,
and alcids accounted  for foraging populations.  Many birds  observed in fall
(Bonaparte's Gulls  and Common Terns)  primarily eat small fish or plankton.
while abundant wintering species like Arctic Leon, cormorants, Mew Gulls, and
Common Murres are larger in size and presumably feed on larger-sized prey.

     Active Pass is narrower and its strong tidal  currents attract very large-
foraging flocks of  birds.   Average densities in spring 1978 were 674.8/km",
and the winter average was 383.8/km2.  These included censuses during "slack-
water," periods when bird activity was low.  While Bonaparte's and Mew Gulls,
which feed upon  zooplankton, often were present in  large numbers,  the great
proportion of the biomass  consisted of birds of two piscivorous species, the
Arctic Loon and Brandt's Cormorant.  The  spring and  winter concentrations of
these  two  species in Active Pass were relatively consistent  and were among
the highest  recorded in  the study  area.   Herds  of up  to  30  Stellar*s  or
California  sea  lions  were   also consistently  found in  Active Pass  in the


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winter-spring  seasons,  and  killer  whales  are  regularly  observed  there.
Active  Pass  is  also  well-known  as  one  of  the  most  productive  salmon
sport-fishing  locations  in  the region  due  to the  use  of this  passage by
migratory salmon.

     Similar situations  and  importance factors, with variations in magnitude
and  species,  are  found at  other  narrow  passages  in  the study area,  in
particular, southern  San Juan  Channel near  Cattle  Point  and  Deception Pass
and, on a lesser scale, Thatcher Pass and Obstruction/Peavine Passes.

V.  B.  3.  c.  (3)   Offshore;  bays.   This  habitat type encompasses the deep
(>20  m) water of  bays.   Available  biological  information  for  offshore
habitats is  limited to  bird and mammal  data.   Phytoplankton production and
biomass can be important in this habitat, since the contribution of attached
plants  to  total  production  is minimal.   Conditions  such  as water  column
stability,  insolation,  and nutrient  inputs  are  optimal  for  phytoplankton.
This  habitat  can be  important  as  a  foraging,  rearing,  or nursery area for
some  species;  a  roosting area  for birds;  and for use  by  both nonharvesters
and harvesters.

     An example  of  an offshore bay habitat is Bellingham Bay..  This  bay is
quite large and  has a sizable  offshore  component.  This area is  notable for
the large percentage of Western Grebes found  there, which  is  by  far the most
abundant bird  species drawn  to forage  upon the  rich  fish fauna.  This and
other common species which roost on the open  waters  are loons, grebes, gulls,
and Common Murres.  Bird densities exceeded 258/km?  in  our surveys, and total
abundance has been estimated at 32,000 birds  (Wahl et al.,  1981).

     Everitt et al.  (1980)  reported harbor seals  in Bellingham Bay on a few
occasions but  in small numbers.  The  difficulty in counting  seals from the
air  in  an area  of  high human  disturbance may have accounted for these low
numbers since  several haul-out sites known  to  local  residents  were never
observed with  seals during aerial  surveys. Balcomb et al. (1979)  speculated
that  local  pods  of  killer whales  can be expected in  this  area  during  fall
salmon  runs.   Other cetaceans  observed in  Bellingham Bay  include  gray whales
(rarely), minke whales,  and harbor porpoises.

     Bellingham Bay  is undoubtedly important  as a rearing area for juvenile
salmon, though no data were collected  in  this study  to  verify  this assertion.
Nonconsumptive users  can be found in  Bellingham Bay engaged  in a variety of
recreational pursuits, probably the most obvious  of which is sail and motor
boating.   The bay  provides  a  valuable  commercial  fishery   and  is heavily
fished  by  local  salmon  gill-netters during  peak  runs.   An  active sport
fishery also occurs; greatest activity is often found on the outer reaches of
the bay.

V.  B.  3.   c.   (4)   Offshore:   open.   Open  water  represents a  very large
component in the study area.  However,  little biological data were collected
there.   Factors of  importance to this  habitat  include  foraging, rearing,
migration,  and roosting by  many  species   and  harvesting  by  commercial  and
sport fisheries.
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     The Western Strait of Juan de  Fuca is an example of  this  habitat.   The
major foragers  and  migrants  through the area are mammals, birds, and salmon.
Marine bird  densities  in this area were quite  low during most of  the  year.
Common Murres roosting on open waters comprised the largest component of bird
fauna for  any  season  with  greatest densities  observed in  the fall when  a
total of up  to 140,000 were observed.  Fall  is  the season when densities of
all species of birds were the greatest, exceeding 89 birds/km2; in the spring
as  few  as  4   birds/km2  were  observed (Manuwal  et al.,  1979).   Cetaceans
utilize  the  open water  areas  exclusively and  may be more abundant in  the
western  Strait  than any  other location in  the study  area (Everitt et al.,
1980).  Essentially,* the  entire population of  gray whales  migrates through
the offshore waters  at the  mouth of the Strait  during north and south move-
ments.  Ball's porpoise may also occur here frequently.  Few harbor seals are
found in this area, but sea lions (northern and California) must pass through
this  area  during the  postbreeding  season (fall  and winter) movements  into
Fuget Sound.

     This area  is  important  for rearing many fish species, as  indicated by
the abundance  of fish  eggs  and larvae in plankton samples.   Chester et al.
(1980)  found 49  taxa  of  eggs,  larvae,   and juveniles  in  ichthyoplankton
samples, 15  of which  were  of  commercial  value (e.g.,  salmon, sole, smelt,
greenling,  herring, cod, and ling cod).  Greatest  densities  were recorded in
late winter  and early  spring.   The authors estimated  as many as 100 million
fish eggs may occur in the Strait at any one time.

     Sport fisheries are active in this area keying in on migrating salmonids
and assorted bottom fishes.   Commercial fisheries,  primarily for salmon,  are
equally important.

V. C.  Ecological Relationships.

V. C.  1.  Habitat-to-habitat  relationships.  Although this report  considers
habitats to  be  separate and identifiable entities,  it is  important  to  note
that  they  all belong  to  a  single ecological system and  that  there are many
functional linkages between  habitats.  Also,  many  human  activities  often
affect more than one habitat either directly or indirectly.  Perhaps the best
example of this is the flow of biological energy through habitats.   Rock and
cobble habitats, as well as those protected unconsolidated habitats that have
eelgrass beds,  are  energy exporters.   That is,  algae  and plankton tissue is
dislodged  by natural  die-off  and wave action and  is  carried  by currents to
other areas.   As  this  plant  tissue is mechanically  broken and degraded into
detritus,  it is an important source of food  to organisms in other habitats.
Although  this  detritus  does   not  accumulate  on  exposed  gravel   and  sand
beaches, sites  having  these habitats may  support  large amphipod populations
such  as  those  seen  at Ebey's  Landing and Deadman  Bay.   Detritus  tends to
accumulate in  protected  unconsolidated habitats  where  it is  an important
source of energy to the total faunal community.   The intertidal/subtidal food
web at  the protected Jamestown site, for example, is detritus-based; and the
sources of detritus are located both nearby and far away.

     Reproduction  of  many species  bridges the boundaries  between habitats.
Many species of benthic invertebrates have planktonic  larvae that spend some
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time as  pelagic forms  in the  nearshore and  offshore habitats.   Some fish
species move  from  deep to shallow water to  spawn.   The eggs  and  larvae of
cod, ling cod,  greenlings, sole,  herring,  and smelts  occur  in abundance in
j>pen water but  may  either spawn or  live as adults  in  nearshore or subtidal
habitats.  Salmon  use  the offshore habitats  for  adult  migration  and  the
intertidal and  shallow  subtidal  zones  for  feeding and  protection  of  the
juveniles.  Birds  (i.e.,  the  Glaucous-winged  Gull)  nest  only on undisturbed
^areas but may feed at many different habitats.  Rhinoceros Auklets nesting on
Protection Island fan out  to  the Puget Sound central basin, Admiralty  Inlet,
;and elsewhere daily to feed.   Similar movements  of harbor  seals  through a
variety  of  habitats  for  feeding,  hauling  out,  and reproduction  have been
observed.

     Though  many  of  the  sites  sampled  in  the MESA  and WDOE  studies were
clearly  representative  of one  habitat  type,   some  showed the  influence of
other nearby  habitat  types.   Point  George  (rock)  was  near a bay;  the Morse
Creek beach  seine  site  (gravel)  was near  cobble; Twin  Rivers  (gravel)  was
near  two streams   and  protected  offshore  by  a  cobble/kelp  reef.   Thus,
biological data  collected at  these  sites  represented  inputs  from  more than
one habitat  type.

     The ecological linkages among species and  the patterns of utilization of
various  habitats  are  complex.   Any  consideration  of  the  structure  and
function of  a single habitat must include linkages with other habitats.

V.  C.  2.  Importance  of  each  habitat  to  total  system.  Habitats  in this
report were   defined  primarily  on  a physical basis.   The  definitions  of
habitats  are  directly  relevant only to  those species  which  are directly
dependent upon the physical characteristics, and indirectly relevant  to those
species which are  present as  a function  (result) of  the  presence of other
species of plants and animals.

     Each habitat  type  means  something  different  to each  species.   For one
species a habitat may be  important as a source of food,  while  to another it
is a breeding or roosting site, and  so  on.   The matrix of habitats and life
support activities  (e.g.,  foraging,  reproduction,  rearing of young) for each
species  differs  among  species.  It  can differ  in terms  of  the  number of
habitats that are  used in each activity and  in  the  relative  importance of
each habitat.  Some species may conduct  all of their life support activities
at  only  one  habitat, while  others  may  conduct  each activity  at  several
habitats. These former species would be considered  to  have narrow ecological
relationships, while the  latter species  would be said  to have broad  ecologi-
cal relationships.

     The  collection  of   physical  habitats  and  processes  and  the  species
loosely or closely  associated with  each make up  the  ecosystem of the study
area.   Because  some  species  have  very  specific  or  physical  requirements,
their abundance  and distribution  in the . area are a direct  function  of the
abundance and distribution of  their required  habitat.  Thus,  a species of
narrow requirements with  only  limited habitat available will be necessarily
rare or common only where the  appropriate  habitat requirements  are met.  The
'habitats that support the greatest number of species, greatest biomass, and
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greatest energy  flow  are  often the most important.  Further, one can look at
the  importance  of a  habitat  from  its  contribution to  the maintenance  of
species in  other habitats;  i.e.,  it  is a net exporter  of  reproductive pro-
ducts, material, and/or energy.

     From the discussion  above it is apparent that the biological components
of the  ecosystem are  dependent upon  all  habitats.  No  community  associated
with a habitat type functions in a vacuum entirely dependent on just one site
representing a single habitat  type.   It follows,  then, that the loss  of any
area  would  not  only affect those biota at that  site,  but  possibly  those
associated with other habitats at other sites.

     The importance factors and examples discussed above address each habitat
type individually as  if  they were not  interrelated.  Of  course,  this  asser-
tion  is not true.  The reader must  appreciate  that while  the  nature  of the
interrelationships  may   be  poorly   understood   or  nonquantified,   these
relationships do exist and are often important.

V. C. 3.  Importance  of  study area to  Northeast  Pacific.   The importance of
the  study area  to the biota of  the northeast Pacific and adjacent provinces
became apparent during many of the studies.  Though no studies were performed
to specifically  characterize the relationship of  the study area  to adjacent
or larger systems, several examples are noteworthy.

     The  relatively  protected  nature of  the  study area  lends   itself  to
providing  important  habitats   for  juveniles and  breeding adults  of  many
species.   These  waters  are  situated  near  (between)  the  boundaries  of
boreal/sub-Arctic and subtropical waters,  and  as  such its  fauna  is  rich,
including  species  of both  areas.   For  many  species  of  fish,  birds,  and
mammals, these waters provide a place  to pause during northward or southward
migrations.

     Five species of  salmon move through these waters  during  two  phases  of
their life cycles.  Adults move into the protected waters from the open ocean
enroute to spawning streams and large  runs occur at  all  seasons of the year.
After spawning  and  hatching, smolts move into the study area and eventually
enter open ocean waters.  The contribution of Puget  Sound salmon to the North
Pacific pool  is large.   Adult herring  also move in  and out of the study area
from northeast  Pacific waters  for spawning  purposes.   It  is unknown what1
contribution this spawning population makes to the oceanic herring stock.

     The inland waters of Washington provide a rearing area for larval and/or
juvenile forms of sablefish, yellowtail rockfish, and, perhaps, other related
species.  Adults  of these species move  into  oceanic waters  before becoming
sexually  mature, and all  spawning  takes  place  in the ocean.   The  adults
remain  offshore,  but  juvenile forms enter the Puget Sound  region  until they
too  approach sexual maturity.

     The study  area is important  as   a wintering area  for migratory  marine
birds that  nest in other coastal or  inland  areas.  An example is the Common
Murre which is abundant in the  inside waters of the  Strait  in fall and winter
and  which  return to  breeding areas along the open  coast  from California to
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Alaska  in spring  and summer.   Other species  exhibiting similar use  of  the
study  area   include  Western  Grebes,  Arctic  Loons,   Brandt's   Cormorant,
Oldsquaw,  and Mew and Thayer's Gulls.

     Manuwal  et al.  (1979)  identified  the  Rhinoceros  Auklet  as  comprising
approximately 60%  of all breeding  birds in  the  study  area.  Of  the  nearly
18,000  pairs  of Rhinoceros  Auklets, most breed on Protection Island.   This
large  breeding  concentration  represents  a  significant  proportion of  the
entire  northeast Pacific population of Rhinoceros  Auklets.

     The importance  of  the  study area  to  northeast Pacific- populations  of
most cetaceans is  unclear.   Most species occur here  rarely or  accidentally.
Of  the  common  species  only  the   gray  whale  and  killer whale  occur  in
appreciable   numbers.   Essentially,  the  entire  population of  gray  whales
passes   through  the  extreme  western reaches  of  the  study area  during  its
northward migration in the late winter and spring  and  southward  migration in
the  fall.  This  endangered  species is  the  largest remaining population of
baleen  whales in the northeast Pacific.

     California sea  lions migrate into the area  in the late fall and winter
from California and adjacent areas.  Nearly 300 animals have been observed in
November in  the study  area.   Northern sea lions also  migrate  into the area
during   late  fall  and  winter,   though  usually  in  lower  numbers   than  the
California sea  lion.   Northern sea  lions  breed  in  coastal  locations  of
California,   Oregon,  British  Columbia,  and  north   to   the   Bering  Sea.
California sea lions breed along  the coast of California and Baja.

     No benthic invertebrates  or plants are endemic  to the study area.  The
inland  protected  habitats provide  a contribution  to  the  total  gene pool of
the  coastal  northeast  Pacific  waters.  Many  soft bottom  infauna  and rocky
intertidal epifauna  common  in the  area are also found  along the coast and in
other inland areas north into Alaska and south at least to  Point Concepcion.

     Open ocean zooplankton have  been  observed  entering  the  Strait during
strong  onshore  winds associated with  storms.   These organisms,  while not
normally  excluded  from the  Strait, become  very  concentrated  during these
events.   Their  entry  into  the Puget  Sound  central  basin has   not  been
documented.

V. C. 4.  Unique features.   During  the  studies  that were performed under the
MESA and WDOE programs, the  investigators observed  biological features of the
study  area that  were unique and noteworthy.   These are  listed and briefly
discussed below.   This  list  is  not  comprehensive.   It  is not explicitly meant
as  a list of  important  features (biologically,  socially,  or  politically),
though  this  conclusion  is implicit.   Such an  explicit  evaluation of relative
importance for  all  biota is not possible,  since  the data base  is  neither
complete topically nor  geographically.  The list  has not been formulated in
any  particular order.
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V. C.  4. a.   Protection Island.  Over  19,000 of  30,000  pairs of  breeding
birds in  the  study area were found  there.   Total counts of over 8,000 birds
were recorded  along  the shoreline.   Eagle  nests were  found on  the  island.
Average monthly counts of nearly 150 harbor seals were recorded; a maximum of
223 were  observed  at one  time.   The second  largest breeding  population of
harbor seals was  found  there.  Nearby Dallas Bank supports an important kelp
bed and foraging area for predators.

V.  C.  4.  b.    Smith-Minor  Islands.   A  maximum of  44  harbor seal pups  was
observed  there,  making  this  the most important  pupping site  in the  study
area.  Monthly counts of harbor seals  averaged about 150;  a maximum of  257
were observed at one time.  About 850 pairs of breeding birds were recorded.

V. C. 4. c.  Race Rocks.  Combined counts of over 300 California and northern
sea lions were made for this rocky  isle in  the  winter.  Monthly counts of
harbor seals in a coastal area  of Vancouver  Island that included Race Rocks
averaged about 200; a maximum of 504 were counted in August.

V. C.  4. d.   Dungeness  Bay/Dungeness Spit/Jamestown.   Dungeness Spit is  a
National Wildlife Refuge.  A maximum of nearly 5,000 birds occurred along the
shoreline  of   the  spit.   Another  200 birds were  observed breeding  in  the
Dungeness Bay/Jamestown  area.   Nearly 55,000 birds  have been observed  along
the shoreline  in  the latter area, the largest  concentration of marine birds
recorded along the shorelines of the study area.  The  highest  Bird-Oil Index
values were calculated for the Jamestown subregion,  indicative of the density
of  birds and  their  sensitivity to  oil.   Monthly  counts  of  harbor  seals
averaged  about 50;  a maximum of  119  were observed in  August.   Over 50,000
infaunal  organisms/nr were  found at Jamestown. Beach  seine  collections were
species-rich and  high in  biomass.   Epibenthic  zooplankton  samples  taken in
eelgrass at Jamestown exceeded  those taken elsewhere in biomass  by  at least
an order  of magnitude.   Juvenile salmon were abundant in beach seine samples
taken on the exposed side of Dungeness Spit and at the Jamestown site.

V.  C.   4.  e.   Padilla   Bay.   This  bay  has  been  designated  as a  National
Estuarine Sanctuary.  The  broad mudflats support dense  infaunal  benthos  and
eelgrass.   Projected  total  estimates  of  up  to  90,000  birds  along  the
shoreline and  in  the water have been calculated  for  the bay,  the  majority
being  found  in the  water.   As  many as  95  harbor  seals  have  been observed
hauled  out  on  mudflats  at  low  tide;  the  area is important   for  pupping.
Samish  Bay  and the  undeveloped  portion  of Bellingham Bay share  many of  the
same characteristics as Padilla  Bay.

V. C.  4.  f.   Slip Point to Pillar  Point.   Mean total biomass for intertidal
epibenthos was very  high along  this  rock bench.  At the 0'  tidal elevation,
over 11,000 g/m2  were recorded, the highest value observed along the Strait.
Species  richness  was also high  (over 120 species)  among epibenthos  sampling
sites.

V.  C.  4. g.   Admiralty Inlet.   Average projected  estimates  of over  7,000
birds were calculated for this area; many species are known to be susceptible
to the effects of oil.  Killer whales, minke whales, northern elephant seals,
and  harbor seals  transit  the   inlet  to and  from  Puget  Sound  and  probably


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forage  there.   Salmon  migrating  to  and  from Western  Washington  streams
transit the area also.  Foraging by over 12,000 birds in the turbulent waters
at one time in this area has been observed.

V. C. 4. h.   Cherry Point.  The highly important  herring  spawn  activity in
February/March  is   reflected  in  a  considerable  commercial fishery,  high-
density tow net catches, and a seasonal influx of marine birds.   Up to 24,000
birds, 22,000 of which were scoters, were observed in the spring.

V. C.  4.  i.  Western Strait  of  Juan  de  Fuca.   Total  estimates of  Common
Murres  of  up  to   140,000  in  the  fall have been  calculated for  these open
waters; exceptionally high  Bird-Oil  Index values  accompany these  counts.
Cetaceans  such as gray, minke, and killer whales occur there periodically, as
do Ball's  porpoise.

V. C. 4. j.   Discovery Bay.   A high species richness of birds and projected
total counts of up to 18,000 birds have been recorded.  Mean species richness
values  of  up to  30 species of fish were  observed for beach  seine samples
taken at Beckett Point, the highest recorded for the Strait.   Fish abundance
and biomass  were  consistently very high.   Epibenthic  zooplankton abundance
and biomass were exceeded only by those data from Jamestown.  A major commer-
cial  clam  bed  exists  along  the  shoreline  of Discovery  Bay.   Mean total
abundance  of benthos  at   the 0'  tidal  elevation  equalled nearly  60,000
organisms/m2, rivalled  only by that of the Jamestown site.  Species richness
and biomass were also relatively high.

V. C.  4. k.   Southern Lopez Island  and vicinity.   Projected total estimates
of up to 11,000 marine  birds were recorded.  Nearly 2,000  pairs of breeding
birds were  observed in the  area.   Up to 32 harbor  seals were  seen on Mummy
Rock  near  Lopez Island.   Northern sea lions  were  also seen  there  and in
Middle  Channel.    Considerable epibenthos  were associated with  the exposed
rock habitat.  Killer whale migratory routes through the San Juan  Islands and
the eastern Strait converge  in the area immediately  south of Lopez Island.

V. C.  4.  1.   Tatoosh Island.   Nearly  2,200 breeding pairs  of  marine birds
were  seen  on this  island,  the second  most  important  breeding  colony in the
study area.   Projected  total  estimates of  up  to 17,000 birds were  made for
the  area  along the  shoreline  and  on  the  island.   Some  harbor seals and as
many as 55 northern  sea lions have been  seen  on Tatoosh Island.  Epibenthos
on this exposed rock is probably abundant and dense.

     Other areas having unique features outside or bordering the study  area
have  not been listed, though  the large salmon runs  into the Fraser River and
bird  populations  throughout the Canadian Gulf  Islands and  in  Boundary  Bay,
Skagit  Bay, Port Susan, and Penn Cove  are well-known.
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              VI.  POTENTIAL INTERACTIONS OF HABITAT TYPES AND

                   KNOWN OR PROPOSED TYPES OF PERTURBATIONS


VI. A.  Summary of Present Pollution Status

     The study  area  has been and  remains  relatively free of  pollution.  The
majority  of  the  shorelines  bordering  the  study  area  are  unpopulated  or
sparsely populated.  Except for isolated areas near Seattle and Tacoma in the
adjacent  Puget  Sound  basin,   the   assimilative  capacity   of  the  marine
ecosystems  generally  has  not been exceeded (Goldberg,  1979).   Urbanization
and industrialization have  primarily occurred near  estuaries  and embayments
(e.g.,  Port  Angeles,   Friday  Harbor,  Bellingham,   Anacortes).   Some  local
historical,  existing,  and/or   potential   problems  have  been  identified,
however, and are discussed briefly below.

     A large variety of pollutional  stresses  conceivably could take place in
the study area.  The  categories  addressed below  are  those considered by the
authors to  be most important .in  the  study area relative to their historical,
existing, or potential  impacts.

VI. A. 1.   Oil  spills and other  industrial accidents.  Two large spills have
occurred in the  study area.   One,  a spill of 5,000  gallons of  crude oil off
the ARCO  dock at Cherry  Point in  1973,  was not  studied, and  its effects on
the marine  environment  are not known.  The second was a 200,000 gallon diesel
fuel  spill  from the  Texaco dock  at Anacortes  in  April 1971.   The initial
mortality  from  this spill  was evaluated,  primarily west and north  of  the
spill  site.    Localized  areas   showed  extensive  mortality   of  surface
invertebrates,  algae,   and  infauna.   Some nemerteans,   polychaetes,  clams,
snails,   barnacles,   limpets,   and   sea   cucumbers   suffered   substantial
mortalities;.some recovery was observed six months later in gravel and cobble
beaches  (Woodin  et al., 1972).   No studies of  impacts  on fish,  plankton, or
birds were  conducted, nor was  any  long-term damage assessment made.  Effects
from  a small but  persistent  spill  of  Navy  Special  Fuel  Oil  residue  upon
intertidal  biota near  Cape Flattery  were restricted  to a  small  area  and
included loss of some species and pathological problems in sea urchins (Clark
et al.,  1975).   Other  small spills have  occurred in the area,  primarily in
maritime harbors,  but  their effects have not been  studied.   Existing levels
of petroleum  hydrocarbons in  the  study area were  found to  be  very  low at
sites distant from harbors and refineries (Brown et al.,  1979).

     Spills of  other hazardous  substances have  not been documented  in the
study  area.   However,  a major PCB (polychlorinated  biphenyl)  spill occurred
in the Duwamish  River  in  Seattle south of the  study area in  1974.   Approxi-
mately  1,300 kg of  Aroclor   1242,  a  PCB  mixture,  were   spilled when  a


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transformer  was dropped.  Some  of  the material was  removed  by dredging,  but
up to 2 ppm  in sediments were recorded  in  the immediate area  following  the
spill (Pavlou and Horn,  1979; Pavlou et al.,  1977).

VI.  A.  2.  Oil refineries and transshipment facilities.   Four  oil refineries
are  located  within the  study  area.   Their total refining capacity  is  about
336,500 barrels per  day.  Despite the considerable  efforts  on the part  of
these  industries  to remove pollutants  from  wastewaters, chronic inputs  of
B.O.D.  materials  and  oil and  grease occur.   A range of 10.2 to 29.5  mg/1
B.O.D.  and  3.7  to  11.9 mg/1  oil  and  grease were  measured  in 1972 over  a
two-month  period.  Maximum  pulses  of 1,074 mg/1  and 426 mg/1, respectively,
were measured in  1974.  Though the total oil removal  efficiencies of  the
refinery wastewater  treatment   facilities  ranged  from  95  to  99.99%,  these
facilities  were  found   to  be  relatively  ineffective  at   removing  soluble
aromatic   fractions    (Pizzo   et al.,   1978).     Consequently,   petroleum
hydrocarbon  levels  in   sediments  and  mussel  tissues  collected near  these
refineries were often higher than in samples  collected elsewhere in the study
area (Brown et al., 1979).

     No consistent indications of lethality among oyster  larvae, and juvenile
coho and chinook salmon exposed to undiluted  refinery effluents and receiving
water were recorded by  the Washington  Department  of Fisheries  (Pizzo et al.,
1978).   No  studies on  the  effect  of refinery  operations on the benthos are
available.

     No crude oil or  refined  products  pipelines  traverse  the study area at
this time.   Refinery  products  are currently  transported to  the Seattle area
and  other  Northwest markets by truck,  barge, overland  pipeline,  and ship.
Puget Sound refineries  shipped about  36  million barrels  of  products  in 1974,
40% of which was transported by marine  traffic  (Pizzo et al.,  1978).

     Several proposed tanker-to-pipeline crude oil  transportation facilities
are  under  consideration  for  the area  and/or nearby Canadian  locations.  If
constructed, a throughput volume of  700,000 to  933,000  barrels per day would
be expected in at least one of  the proposed facilities,  involving from 300 to
395 tanker port calls per year.  Oil spills  as a result of tanker collision
or  grounding and operational mistakes  or  equipment  (e.g., pipeline) failure
could occur  (U.S.  Bureau of Land Management, 1979).  The processes that may
determine the  fate of oil spills resulting  from the operation  of  one proposed
facility  and  the  biological  communities   that may be  affected have  been
summarized  (Long,  1980).

VI.  A.  3.    Habitat   modification.    The  irreversible losses  of  habitat
associated  with  dredging  and construction  of  piers, marinas,  jetties,
bulkheads,  etc.  occur  periodically in  the  study  area.   Loss  of habitats  can
occur   through  removal  of  sediments,   filling,   burial,  modification  of
nearshore currents, or  removal  of marsh or  other  vegetation.

     The  study area as  a whole has  been minimally  impacted  by projects  that
cause  loss  of  habitat  due, in part,  to  the  low  human population density.
Those  projects  which   have  been  implemented  often were intended to either
stabilize  shorelines or  protect  and  accommodate  ships or  boats.   Habitat


                                     143

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modifications which have occurred in the past include breakwater construction
at Neah  Bay;  stabilization of Ediz Hook with  rip-rap;  construction of piers
at Cherry Point, March  Point,  Dungeness and  Port Angeles;  construction  of
marinas  at  Sandy Point,  Orcas Island, Friday Harbor, Port Angeles, Neah Bay,
Birch Bay, Anacortes, and Bellingham;  dredge-and-fill  operatios  at Semiahmoo
Spit and Bellingham;  and construction of structures and  docks  at Anacortes,
Port Angeles, San Juan, Orcas, Shaw, and Lopez Islands.

VI.  A.  4.    Upland  modification.   Upland  activities  such  as  agriculture,
construction,  and  logging ultimately affect  marine  habitats.   Excessive
nutrient  inputs  from  fertilizer  runoff,  excessive suspended  solids  inputs
from erosion and runoff of pesticides can reach the bays and estuaries of the
study area and cause deleterious biological effects.

     Upland modification activities are greatest along the Olympia Peninsula,
in the Skagit River  basin,  and in  areas  surrounding  Bellingham.  Suspended
solids loads from the  Fraser  River system to the  north  represent the single
largest  input  to the study area.  Stockner et  al.  (1979)  observed trends in
phytoplankton productivity and biomass  apparently  related to characteristics
of the plume,

VI. A. 5.  Forest products.   Four major pulp mills  are  located in the study
area  (Bellingham, Anacortes,  two in Port Angeles).   Pollution  problems from
these mills have been documented and are of two types:  First, the deposition
of settleable  solids in bays and harbors creates anaerobic conditions in the
sediments  and tends  to  eliminate  many macrobenthos  species.    Second,  the
effluent,  because of  oxygen-demanding and toxic  materials,  can cause water
quality  problems.   Lethal  conditions to juvenile  salmon,  benthos (including
oysters), and bivalve larvae have been documented  (FWPCA, 1967).

     Rafted  logs are stored in water  in  a  number of locations  in the study
area.  Although  no studies of the impact of log rafting are available for the
study  area, Waldichuk  (1979)  described  some  impacts  in  parts  of  British
Columbia under conditions similar  to those of  the study area.  Detrimental
impacts  of log  rafting  include compacting  of sediments  and  smothering  of
benthos  at intertidal log storage areas; production of organic leachate toxic
to juvenile salmon;  accumulation  of  oxygen-demanding  bark and  wood  debris
under  log  rafts,  causing anaerobic  conditions unsuitable  for  many benthic
species  including prey  for  juvenile  salmon;  and abrasion  by  shifting logs
disrupting benthic fauna and rooted vegetation such as eelgrass.

VI. A. 6.  Domestic wastes.  Domestic wastes discharged from  urban areas into
marine  waters,  in  most cases,  only  receive  primary  treatment.  Although
detrimental  effects  to the environment have not been documented in the study
area,  potential  pollution  effects  from B.O.D. material,  nutrients,  and/or
toxic  substances  (metals, organics) exist.

     The largest metropolitan  areas  (Bellingham,  Anacortes,  Port Townsend,
Friday   Harbor,   Port  Angeles,  Sequim)  produce   the  greatest  volumes  of
municipal sewage  and,  thus,   potentially  pose  the  greatest   environmental
problems.  Permitted  discharge volumes  (millions of  gallons  per day)  for the
largest  municipal waste treatment plants in the area were documented in 1975
                                     144

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as follows:  Port Angeles, 2.3 mgd; Anacortes, 2.2 mgd; Bellingham, 1.56 mgd;
Sequim, 0.57 mgd;  Friday Harbor, 0.5  mgd.   Smaller municipalities,  such as
Skyline  (near  Anacortes)  and  Ferndale,  discharge  considerably  less  than
500,000 gallons per day  (National Commission on Water Quality, 1975).

VI. A.  7.   Commercial and sports fisheries.  Fisheries harvesting represents
a major portion of the economy of the  Pacific Northwest.  Both anadromous and
resident  fish  are  caught  along with shellfish.   Gill  nets,  purse seines,
trawls, and trolling gear are used to  capture fish.  Traps  and pots are used
to collect  crab  and shrimp.  Both diver-operated and boat-operated hydraulic
gear are used to collect  subtidal bivalves, while rakes  and shovels are used
for intertidal bivalves.

     Salmonid fishing activity within the study area  is  most intense in the
Strait  of  Juan de  Fuca,  Rosario  and  Haro  Straits,  while  bottomfish are
collected most  often in the embayments,  such  as Discovery  Bay.   Shrimp and
crab are  caught  throughout the  area and  in the  adjacent  Hood  Canal.  Bivalve
fisheries are  restricted to the embayments, such  as Dungeness and Discovery
Bays.

     The  environmental  implications   of  commercial  harvesting  of  subtidal
hardshell  clams  with a  hydraulic escalator harvester have been observed in
field  experiments  and   summarized  (WDOF/WDNR,  1978).   Disturbance of the
bottom  results  in  furrows,   redistribution  of  sediments,  some  burial of
organisms,  and  temporarily  increased   suspended   particle  concentrations.
Dislodged,  nonharvested  clams  and   other  species  may be  vulnerable  to
predation.  Some  individuals  may die due  to  shell breakage.   The numbers of
associated  benthic  species in areas  affected by  harvesters is  reduced, but
the abundance and biomass per unit area  appear  to  remain unchanged.  Marine
eelgrass  and algae  beds  can be  lost  due  to  removal;  however, harvesters
cannot  operate in  dense  eelgrass  mats.   Thus  far,  very  little  of   this
activity occurs in the study area, but various parts of the  Strait of Juan de
Fuca support potentially  harvestable clam beds.

VI.  A.  8.   Mariculture.  Mariculture operations are  largely restricted to
salmonids and bivalves in the  study area, often  in suspended or floating pens
or racks.  The technology to raise marine algae  is currently being develolped
nearby, but  is  not  yet operational.   Salmonids  have been raised in  floating
pens  at  one  time   or  other  at Lopez  and Orcas  Islands.   Oyster raising
operations  have  occurred in Dungeness Bay,  Sequim Bay,  Padilla  Bay, Samish
Bay,  and  Westcott  Bay.   Currently,  plans  for  siting  experimental   algae
mariculture apparatus focus upon embayments.

VI. A. 9.  Recreation, educational activities, scientific collection.  A wide
variety of  activities lumped  together here can  have  detrimental biological
.effects,  though  usually  unintentional.   These  activities are often greatest
in biologically  important areas as the  biota  are the attraction to  many of
the people  causing  the perturbation.  Activities included here are:  recrea-
tional  boating near  or  among  marine mammals  and  birds;  recreational and
commercial  aviation  near  marine birds;  beachcombing,  walking, motorcycle
riding, horseback  riding,  other recreational  activities  and dogs  near or
                                     145

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among nesting  bird colonies;  educational  field  trips;  and collection  and
removal of organisms for educational and research purposes.

     Areas  where significant  disturbance  and/or  removal of  organisms  has
occurred  include:   Dungeness Spit;  Protection Island; Smith  Island;  Sucia,
Patos and Matia Islands; Tongue Point; Slip Point; Padilla, Bay;  and numerous
bird nesting sites in the San Juan Islands.

     Everitt  et al.  (1980)  documented  disturbance  of  harbor   seals   on
Protection  Island and  Smith-Minor Islands.   Groups  of seals on  Protection
Island were disturbed  (enough  to flee to  the  adjacent water)  most  often by
approaching boats  and to  a lesser  degree  by airplanes, beach  walkers,  and
helicopters.  Disturbance was  greatest  on  weekends  and usually at mid-day.
The period  of  time involved for seals to  return  to  haul-out sites following
removal  of  the  disturbance was  not measured,  but  appeared  to   take  from
several hours to several days.

VI. B.  General Perturbation Effects on Biological Communities

     As described earlier in this report a wide variety of marine communities
are found in this region.  In the nonperturbed or "healthy"  state,  they vary
greatly  in  the  following  community parameters:    species  components  and
organization,  species  richness and  diversity, abundance,  and biomass.   No
single  measure  would  differentiate a  healthy  community   from a possibly
perturbed community.  However, perturbations have general biological effects.
An understanding of these plus careful study may allow assessment of perturba-
tion impact at a given site.

     Perturbations may  be  placed into three broad categories.   The first is
habitat  alteration.   Many  perturbations  involve a   change  in  the physical
characteristics at a site.  For example, the construction of a breakwater may
involve replacing a soft sediment habitat with a rock habitat.   This results
in  the  wholesale  replacement of  one  community  by  another in response to
destruction of  one type  of habitat  and  replacement  by  another.   Community
parameter measures would change to match those of the  "new"  community.  There
would be new species components and possibly organization.  The parameters of
species  richness  and  diversity,  abundance,  and  biomass   may  increase or
decrease.   Habitat  alteration  effects are generally  dramatic and,  given  our
general understanding of  regional  marine communities, the effects  may be to
some extent predictable.

     A  second category  of  the  biological effects  of perturbations  is  the
nonselective destruction or enrichment of a community.  Examples of nonselec-
tive  destruction are often  dramatic.  An example is  a crude  oil  spill.   In
the  rocky  intertidal  the  primary  effect  is  suffocation  of  the  entire
community.   Other  toxicants  may  kill  the  entire  community.   Less  acute
nonselective pollutants may depress  the community parameter measurements of
species richness  and  diversity,  abundance, and biomass compared to prestress
values.   Once  the toxicant is  removed,  community values return in  time to
normal.   Examples of  nonselective enrichment are  rare.   In  a  hypothetical
example,  a  slight nutrient addition might  result in nonselective   enrichment
                                     146

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of an entire community where primary production is nutrient limited.   Biologi-
cal effects  of nonselective perturbations may to some degree be predictable.

     The  perturbation category with the most  complex and  least  predictable
biological effects  is a  selective  destruction or enrichment.  Many  or most
perturbations affect community species members differently.  Species  specific
responses are  due  to the  differing  physiological tolerances  of  organisms,
differing feeding habits,  microhabitats, life cycle  sensitivity,  or  general
life styles  (sessile, motile, flyer, swimmer, etc.).

     The  community level result of  species  specific  responses  is  potentially
very complex and  unpredictable.   Community species components may change due
to  selective  mortality  of  sensitive  species  or   the   addition   of  new
opportunistic  species  resistant   to  the  pollutant  involved.    Community
organization  may  be  altered.   The  species-rich  marine  communities  are
structured  by  complex  interactions of  predation and competition among its
component species.   Selective removal  of a  key  predator  or  competitor may
dramatically alter  the  community structure.  Community food webs may also be
dramatically altered  by  selective removal of a key  predator  or  other vital
trophic  link.   In  general,  selective perturbations  reduce species  richness
and diversity.  However, selective  removal  of  a competitive dominant species
may actually increase both richness and  diversity.

     Community productivity  as  reflected in the  parameters of abundance and
biomass  may  be increased  or decreased by a .pollutant.   If the pollutant in
nontoxic   concentrations  can  serve  as a nutrient substrate,  blooms  of the
organisms able to utilize it may result in increased community productivity.
However,  most pollutants fall into  the class of toxicants,  which may decrease
community productivity if key producers  are sensitive.

     From the discussion above  it is apparent  that  the  nature of the  effect
is  highly dependent  upon  the nature of the  cause.   Some types of perturba-
tions, for  example, may cause an increase  in productivity, possibly  to the
point  where  eutrophication occurs,  while  others  may  drastically   reduce
productivity.  Some types may result  in  the total loss of  a population, while
another  population may flourish.   Some effects  occurring over a short  time
can be easily observed and  quantified.   Other effects may be very subtle and
are measurable only after  considerable  time.

VI. C.   Perturbation  Types  and Their  Possible Effects

     Table  11 briefly outlines the  major perturbation types in the study  area
as perceived by the authors;  those  communities  and habitats most sensitive to
each;  the potential  impacts of  each and the biological  processes affected;
and environmental questions  or concerns  that  should  be examined to lessen or
estimate possible effects.  This table  is  not  intended  to be  exhaustive  but,
rather,  provides  a framework for  considering  possible  environmental  reper-
cussions of each  type of perturbation.

-VI.  C.   1.   Oil  spills  and  other  industrial  accidents.   Acute  effects of
spills  of  crude  oil,  petroleum products,  or  other toxic  substances  have
historically been documented among  marine birds and  benthos.  Adult fish and


                                      147

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         Table  11,   Major perturbation types and their possible effects  in the  study  area
         Perturbation Types
Especially
Sensitive.
Communities   Especially
 Directly     Sensitive
 Affected     Habitats
               Potential Impacts
                          Processes Affected
                             Environmental
                               Questions
         A.   Oil  Spills  and Other
             Industrial  Accidents
             -  oil  spills
             -  hazardous substance
               spills
 - birds
 - benthos
 - fish
 - mammals
00
- open
  water
- protected
  intertidal
  habitats
- protected
  bays
direct mortality caused
by toxic effects of
hazardous substances
decrease in bird hatch-
ing success due to
oiling of eggs
mortality, morbidity
of benthos, causing
community and biomass
changes
retention of oil In
protected muddy
habitats, inhibiting
recolonization
death of benthos
larvae, leading to
community changes
tainting of benthos, fish
increased mortality
among pinniped pups;
increased chances of
mother/pup separation;
disturbance during
spill cleanup opera-
tions
changes in population
sizes due to emigration,
mortalities, decreased
hatching success
changes In community
composition and biomass
leads to changes in
food webs and produc-
tivity
decrease in population
size, growth rate,
spatfall success in
commercial bivalves
tainting decreases
marketability of
seafoods
What method and
plans are available
to protect biologi-
cally Important
areas?
Which areas, habi-
tats and seasons are
especially sensi-
tive?
What recovery rates
are to be expected?
How will food webs
be affected by loss
of prey groups?
What economic
impacts are ex-
pected?
What preventative
measures can be
implemented to
decrease spills?
Are species of
critical trophic
importance also
those most sensitive
to effects of oil?
         Continued

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Table II (Contd.)

Perturbation Types
Especially
Sensitive
Communities
Directly
Affected

Especially
Sensitive
Habitats Potential Impacts Processes Affected

Environmental
Questions
B.  Petroleum Refining,
    Transshipment and
    Utilization
    - chronic oil Inputs
      in refinery waste-
      water
    - atmospheric inputs
      from refinery
      stack emissions
    - oil inputs from
      bilges, small
      dockside spills,
      marinas, small
      craft, etc.
benthos       - bays         - chronic inputs of
fish          - protected      hydrocarbons cause
seabirds        intertidal     mortalities and
(especially     and near-      abnormalities among
diving          shore          larvae of benthos
species)        habitats       and fish
                             - chronic inputs of
                               hydrocarbons lead
                               to physiologic
                               stresses, histo-
                               pathologic
                               diseases and
                               behavioral changes
                               in adult benthos
                               and fish
                             - seabirds susceptible
                               to oil-fouling and
                               death during small
                               spills
- changes in benthos and
  fish community compo-
  sition
- decrease in reproductive
  success among benthos
  and fish
- histopathologic diseases
  cause decreased ability
  to compete for food,  to
  avoid predators, and  to
  reproduce
- losses of seabirds leads
  to community composition
  changes and decreased
  density
Will decreasing or
stopping chronic
hydrocarbon inputs
minimize or elimi-
nate impacts?
Are there siting
alternatives that
would avoid impacts
upon important
biologic communities
or result in rapid
and considerable
dilution of inputs?
Can effluent/
emission be used to
reduce monitoring
data effects?
Can safeguards
(e.g., booms) or
regulatory actions
be implemented to
decrease impacts?
Continued

-------
       Table  11  (Contd.)

Perturbation Types
Especially
Sensitive
Communities-
Directly
Affected

Especially
.Sensitive
Habitats Potential Impacts Processes Affected

Environmental
Questions
in
C.  Habitat Modifications
    - piers, Jetties,
      marinas, bulkheads
    - solid and wood
      waste fills
    - dredging (shell-
      fish and
      channelization)
      and filling
    - buildings,
      underwater pipe-
      lines, bridges,
      other structures
infaunal
zoobenthos
shore and
diving
birds
marine
mammals
fish (e.g.,
spawning
herring)
                                                 - all
                                 Potential Impacts (contd.)
                                 - possible rerelease
                                   of sediment-bound
                                   toxic chemicals
- removal, loss, burial
  or substitution of
  habitat/substratum
  types, causing changes
  in community composi-
  tion
- changes in nearshore
  circulation, possibly
  leading to beach
  morphology changes and
  further burial or habi-
  tat loss, shifts in
  sediment characteris-
  tics and changes in
  replenishment of
  nearshore water
  masses
- disturbance of birds
  and mammals during
  construction
- burial or removal of
  biota, nests, eggs,
  animal burrows,
  causing direct mor-
  tality
- removal or modifica-
  tion of roosting,
  resting,  haul-out
  site habitats
- alteration of water
  quality and current
  patterns
- decrease in avail-
  ability of food
  species
- decrease In plant
  productivity due to
  removal or loss of
  suitable substratum
- shift in faunal
  community structure
  to less desirable
  state
- decreased hatching,
  nesting, pupping
  success
- decreased benthic
  blomass
- emigration of seals
  and birds,  decreas-
  ing population size
• Can the proposed
 project be modified
 to decrease habitat
 loss?
• Can construction be
 scheduled for a
 season in which
 disturbance would
 be minimal?
 Can new habitats be
 established to re-
 place that which
 will be lost?
 Will any new habi-
 tats be suitable for
 biota?
 Are there siting
 alternatives that
 would minimize
 impacts?
 What is the esti-
 mated recolonlzation
 period and is
 enhancement (e.g.,
 bivalve seeding)
 feasible?
      Continued

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Table 11 
-------
         Table 11  (Contd.)

Perturbation Types
Especially
Sensitive
Communities
Directly
Affected

Especially
Sensitive
Habitats Potential Impacts Processes Affected

Environmental
Questions
         E.  Forest Products
             - pulp and paper
               mill effluents
             - log-rafting
             - chips, debris
- zoobenthos
- fish larvae
- zoobenthos
  larvae
- bays/
  estuaries
. en
 PO
- mill wastewater
  discharges, causing
  direct mortality
  among larval forma
  of fish and benthos
- lignins, tanins,
  chips and debris
  leached or spilled
  into water, causing
  death or burial of
  benthos and modifi-
  cation of substratum
  characteristics
- logs directly scour
  or abrade bottom,
  removing or crushing
  benthos
- decrease in benthos and
  fish population sizes
  through death of larvae,
  modification of bottom
  substrata
- decrease in benthos
  bipmaas through toxic
  effects of effluents,
  leachates, scouring,
  or abrasion
- low-oxygen or anoxic
  conditions in near-
  bottom water caused
  by fi.O.D.  materials,
  leading to physio-
  logic stresses
Can potential
impacts be minimized
by siting alterna-
tives If new mills
or other facilities
are built?
Can potential im-
pacts be minimized
by modifying
practices and
implementing
seasonal controls?
Can log-rafting
methods be modified
to minimize or
eliminate impacts?
         Continued

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         Table  11 (Contd.)




Perturbation Types
Especially
Sensitive
Communities
Directed
Affected


Especially
Sensitive
Habitats Potential Impacts Processes Affected



Environmental
Questions
         F,   Domestic Wastes
             - municipal wastes
               (sewage)
             - urban x'unoff
             - nonpoint  sources
- phyto- and    - poorly
  zooplankton     flushed
- benthos         bays
- fish larvae
01
GJ
— nutrient inputs
  raised, leading to
  eutrophication
- excessive inputs of
  freshwater, suspended
  solids may cause mor-
  talities due to
  changes In water
  chemistry
- inputs of toxic
  substances may be
  taken up by biota
- Inputs of pathogenic
  bacteria and/or toxic
  substances may con-
  taminate seafood
- eutrophication can lead
  to anoxia, lethal to
  plankton, benthos
- productivity depressed
  and composition of
  plankton communities
  changed
- subtle histopathologlc
  diseases caused by
  toxic substances
- physiological processes
  altered or stressed,
  e.g., osmoregulation
- food webs and other
  species-species
  relationships altered;
  some predators may
  leave due to lack of
  suitable prey
- loss of or decrease
  in harvestable
  fisheries
         Continued
Are  there  siting
alternatives  that
would  eliminate or
minimize anoxia
conditions?
Will eliminating or
diminishing pollu-
tant inputs alle-
viate  physiologic
stresses?
Will eliminating or
decreasing toxics
and bacterial Inputs
alleviate human
health problems?
What are the eco-
logic  repercussions
of altering food
webs?
Are there alterna-
tives to waste water
discharge?
How can effects of
discharges be
monitored?
What is the carrying
capacity of receiv-
ing waters to
accommodate pollu-
 tant inputs?

-------
        Table  LI  (Contd.)
Perturbation Types
Especially
Sensitive -
Communities
Directly
Affected
Especially
Sensitive
Habitat Potential Impacts Processes Affected
Environmental
Questions
         G.   Commercial  and
             Sports  Fisheries
             -  finfish
             -  shellfish
- fish
- diving
  birds
- marine
  mammals
- subtidal
  zoobenthos
- open
  straits
- nearshore
  (all)
en
•£•
excessive selective
removal of target
species
incidental drowning
of diving birds, seals;
Incidental removal of
nontarget species
loss or disruption of
sediments by shellfish-
gathering machinery
disturbance of marine
birds, mammals
significant removal of
important prey
resources
selective removal of
predators, affecting
food webs, predator
pressure and overall
community structure
decrease in standing
stock of target
species, species
accidentally killed
and predators
decrease in benthos
species richness and
standing stock due
to removal or loss
of substratum
emigration of species
intolerant of distur-
bance, affecting
density and community
composition
Can fishery be
implemented so as to
decrease or
eliminate incidental
deaths?
Can fishing pressure
be timed or regu-
lated to minimize
effects of loss of
target species?
What is expected
recovery time of
incidentally
affected communities
if fishery were
stopped?
What is maximum
fishing pressure
target species and
nontarget species
can tolerate?
Are there shellfish
harvesting tech-
niques which mini-
mize sediment
disturbance?
         Continued

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       Table 11  (Contd.)
Perturbation Types
                                   Especially
                                   Sensitive
                                   Communities
                                    Directly
                                    Affected
Especially
Sensitive
Habitat
                                                                  Potential  Impacts
                                                                                    Processes Affected
                                                       Environmental
                                                         Questions
H,  Mariculture
    - shellfish
    - finfish pens
                                   - benthos
                                   - certain
                                    marine
                                    birds
- protected
  bays
01
en
fecal wastes cause
substratum modifica-
tion, increases in
B.O.D., burial and
smothering of adjacent
or underlying benthos,
increases in sedimen-
tation rates
pens, floats, other
equipment attract
some bird species
and disturb others
production or utili-
zation (depending on
type of operation)
of nutrients may
lead to nutrient
level changes in
water
                                                                                    -increased oxygen demand
                                                                                      near sediment-water
                                                                                      Interface can cause
                                                                                      community composition,
                                                                                      biomass changes among
                                                                                      benthos
                                                                                    - changes in marine bird
                                                                                      communities can occur
                                                                                      due to emigration of
                                                                                      some species and
                                                                                      immigration of others,
                                                                                      possibly including
                                                                                      nuisance species
                                                                                    - plankton communities
                                                                                      may change due to
                                                                                      nutrient level
                                                                                      changes
        Continued
- Are siting alterna-
  tives or pen  rota-
  tion schemes
  available to  de-
  crease potential
  impacts?
- Can benthos commu-
  nity changes, if
  any, be monitored?
- What means are there
  to minimize distur-
  bance of marine
  birds?
- What is the physi-
  cal/chemical  fate of
  fecal wastes?
- What is the assimi-
  lative capacity of
  of the local eco-
  system relative to
  the magnitude of the
  facility?
- What are the bio-
  logical effects of
  predator control
  practices?
- What means are
  available to avoid
 attracting predator?

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         Table  11  (Contd.)

Perturbation Types
Especially
Sensitive .
Communities
Directly
Affected

Especially
Sensitive
Habitats Potential Impacts Processes Affected

Environmental
Questions
cn
          I.   Recreation,  Educational
              Activities,  Scientific
              Collection
              - boating              -  epibenthoa
              - aviation             -  marine
              - beachcombing            birds
              - educational field    -  marine
               trips                   mammals
rock and
cobble
(especially
with tide-
pools)
protected
embayments
Isolated
rocks,
islets,
sand spits
selective removal,
trampling, and mor-
tality of rock/
cobble community
species
disruption or dis-
turbance of nesting,
hatching, pupping or
rearing activities
changes in benthos
community structure
and density
decrease in bird and
mammal population size
due to emigration and
impaired reproductive
success
decrease in predator
pressure, possibly
leading to prey
community changes
Can recreation and
educational activi-
ties be conducted
without causing
biologic impacts?
Can these activi-
ties be regulated or
restricted to avoid
nesting or other
sensitive seasons?
Is disturbance a
transient effect?
How long does
recovery take?
Should especially
sensitive areas be
set aside for com-
plete exclusion of
humans ?

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mammals  are largely able  to  avoid oil spills, though losses of fish and seal
pups  have been documented  during oil spills.  Fish  eggs, larvae,  and juve-
niles are more susceptible to the effects of oil spills than adults.  Marine
organisms may  not escape toxic substances as easily  if  the substances become
dissolved.   Mortality  among  the  plankton undoubtedly  occurs  during spills,
but it is  very  difficult  to  measure.   Also,  plankton communities  have the
capacity to recover very quickly.

     Open water habitats  (e.g.,  western Strait of Juan de Fuca)  where huge
numbers   of marine  birds  feed  and  roost  would be  especially  sensitive.
Protected mudflats, eelgrass beds, and bays  (e.g.,  Dungeness  Bay, Jamestown,
Fadilla  Bay) would  also be sensitive because  of  the density of marine birds
and benthos in those habitats and the possible long-term effects of spilled
substances there.   Spilled substances such as crude  oil would become trapped
in protected  habitats  and little  physical  energy  would be  available  to
facilitate the weathering and/or transport out of the area.

     Spilled  substances could  cause  direct mortality to birds  coming  in
contact   with   the  substance;  mortality to  benthos  due  to   smothering  or
toxicity;  loss  of  larvae, chicks,  juveniles,  or  other  offspring  due  to
toxicity;  inhibition  of  benthos  recruitment  due  to  loss  of  larvae  or
unsuitability of the substrate; and tainting of marine  biota  used as food by
predators  and man.   These impacts  could,  in  turn, lead  to  decreased bird
populations;  changes  in  benthos community composition,  productivity  and
biomass;  changes in  food web  structures;  decreases  in commercial bivalve
stocks;  and decreased  (temporarily) marketability of  seafood species.

VI.  C.   2.   Petroleum  refining,  transshipment  and  utilization.   Chronic
effects   of low-level   inputs of petroleum hydrocarbons from   refineries,
transshipment facilities,  and spills and  leaks  from a wide variety  of other
sources   can occur  among  the  benthos,  fish,  and birds.  The  magnitude of
effects   would be  greatest  in habitats where  dilution, through  weathering
and/or  transport,  would  be  minimal,   i.e.,  in  protected  bays,  mudflats,
eelgrass beds, and marshes (e.g., Padilla and  Dungeness Bays).

     Low-level inputs  of petroleum hydrocarbons  would  have little biological
impact  if  the resulting environmental  loads were small.   That is,  if inputs
were dilute,  small  in  volume, or rapidly dispersed, impacts may  be minimal.
However,  if repeated or continual inputs occurred and dilution  was minimal,
sublethal  effects may  occur as well as death among  some species.

     The  larval  and other young stages of benthos  and   fish  are especially
sensitive  to   low  levels  of petroleum hydrocarbons.   Depending  upon  the
hydrocarbon concentration, death or  a variety of behavioral,  physiological,
 or histological  changes  may  occur  among  the  adults or  young.   Seabirds
 (especially   diving  species)  may   be   lost  due   to direct  toxicity  and
 oil-fouling in highly-concentrated oil slicks.  These impacts could, in turn,
 lead to  changes in  community  composition, standing  stock,  and  density  of
benthos  and  fish;  decreased reproductive  success;  decreased  abilities  to
 compete  for  food,  space,  mates, and  to  avoid predators  and  disease;  and
 altered  seabird  communities.   Marine  mammals  may be affected by disturbance
 during  cleanup operations.
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VI. C. 3.  Habitat modifications.  A wide variety of activities in the marine
environment  result  in removal,  modification,  or  substitution of  the  habi-
tat (s) that certain organisms depend upon.  Since these activities are mostly
restricted to  nearshore  and shoreline areas,  the  habitats therein  are most
often affected.

     Infaunal  benthie  animals  are highly sensitive to burial  and removal or
substitution of substrate.  Many have limited vertical burrowing capabilities
if buried,  all are  removed if  the  substrate  they are  associated with is
removed,  and  all have  low  tolerance of  substrate substitution.   Pacific
herring  and  other organisms  spawn among  eelgrass  or other  vegetation and,
therefore, are sensitive to  removal of either  the vegetation itself  or the
substrate they reside in.  Marine birds and mammals are  sensitive to distur-
bance, loss  of feeding habitat  (e.g., Black Brant  and  eelgrass) and loss of
nesting, roosting, or hauling-out sites.

     Impacts  commonly  associated with  habitat loss  include:   changes in
community composition and/or wholesale loss of  benthos;  changes in nearshore
or  littoral   circulation  as  a  result  of  changes  in  beach  morphology;
disturbance and emigration  of  birds  and mammals; burial  or  removal of biota
or  their nests,  eggs,  or  burrows;  removal or modification  of  habitats at
roosting, resting, and haul-out  sites; and possible release of sediment-bound
toxicants.   These  impacts   could,   in  turn,  result  in  decreased biomass,
density, and  productivity of benthos; changed  benthic  community composition
and prey availability; decreased bird and mammal populations and reproductive
rates; and alterations in current patterns and water quality.

     Habitat  modification may  be mitigated,   in  part,   by  creation of new
habitats  (e.g.,  floats,  pilings,  rip-rap) for marine  organisms.   However,
species  assemblages  may differ considerably   from  those  of  the original
substrate type.

VI.  C.   4.   Upland modification.  Upland construction  activities  and  other
actions  that affect soil management  can have both discrete and subtle effects
on marine  biota many  kilometers away.   These  effects  invariably involve an
intermediary stream; thus, they  are most likely  to  affect an estuary receiv-
ing  such  a  stream.   The   plankton,  benthos,  and  fish  larvae  living in
estuaries and,bays are most  sensitive.

     Potential impacts   are  induced  by  excessive  runoff  of  nutrients,
suspended  solids,  and/or  pesticides,  and  subsequent   transport  of  these
materials  to  the marine system via  streams.   Excessive nutrient inputs can
cause rapid plankton blooms  and  eutrophication,  possibly  leading to an anoxic
condition  that affects  all  biota.   Inputs of  pesticides can cause death or
sublethal  effects among the  plankton,  benthos,  and mammals.    Since  most
pesticides are very long-lived,  they can be transmitted from prey to predator
causing  excessive  levels in the tissues of birds and mammals,  leading, at
high  levels,  to   decreased ability to  survive  and  reproduce.   Inputs of
suspended  particles can decrease primary productivity  due  to  shading of
plants;  can clog feeding and respiratory organs  of plankton, benthic inverte-
brates,  and fish; and can bury or smother benthic organisms.


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     Generally,  the repercussions of these impacts include decreased biomass,
productivity,  density,  and  diversity  of  biological  communities.   Impacts
resulting from pesticide  inputs could  be long-term  due  to  the  stability of
pesticide compounds,  whereas  those of  nutrient  or  suspended  solid  inputs
would stop shortly after the sources were cut off.

VI.   C.   5.   Forest  products.   A  wide  variety  of  environmental  problems
associated with  the forest  products  industry,  besides  those  attributed to
logging operations, have been  documented.   Pulp and paper mill effluents are
lethal to many organisms,  especially the larvae of some  zoobenthos and fish.
The toxicity of  many effluents has decreased in  recent  years, however, due to
implementation of  effluent treatment practices.   Log-rafting  results  in the
release of toxic  lignins  and tanins into the water.  Mill effluents and log
leachates cause greatest  problems  in confined  areas  where dilution is mini-
mal; thus, bays  and estuaries with  poor water  exchange  are most sensitive.
Also, the young of many species of  fish  and  bivalves are reared in bays and
estuaries.

     Log-rafting can also  cause severe  scouring  or abrasion  of surrounding or
underlying benthos (discussed above)  as the rafts  shift back  and  forth in
response  to  he  tides,  winds,  currents,  and   handling.   Chips  and  debris
resulting from sawmill  operations  and log-rafting often  sink and can smother
the  underlying   benthos,  cause  anoxia  during  decomposition,   and release
lignins and tanins.

     The  repercussions  of  these  impacts  can,  in   turn,  include  decreased
density of benthos and  fish  populations,  including totally abiotic sediments;
decreased benthos  biomass; and water quality-related  physiologic  stresses and
mortality.  In the case of mill effluents  and  log leachates, recovery would
be  expected  to  be relatively quick  following  a cutoff of  the source(s),
assuming  toxic  materials  had  not  accumulated  appreciably on  the bottom.
Recovery  of  benthos  in  areas  impacted  with  chips  and  debris  would be
relatively  slow,   since  suitable   substrate  and near-bottom  water quality
conditions would   not  be  available  until  the  chips  and debris were either
removed or decomposed.

VI.  C.  6.  Domestic wastes.   Municipal sewage,  urban (street)  runoff, septic
drain  fields, and  nonpoint source wastes involve  environmental  problems  as  a
result  of excessive  nurtrients,  suspended  solids,  freshwater,  toxic  sub-
stances,  and pathogenic  bacteria   inputs.   These problems are  related to
magnitude  and  concentration;  thus,  poorly flushed  bays  or other  relatively
confined areas with poor exchange  are likely  to be the  most  sensitive.

     Nutrient  inputs  can  cause  rapid plankton  blooms  which   can  lead to
eutrophication  and  anoxia.   Low   oxygen  levels  would  affect  all  biota.
Depressed  salinity  and   increased  suspended   solids   can   lead  to  death,
decreased primary  productivity,  and emigration  of sensitive  species  among the
plankton,  benthos, and fish.   Both factors  can also cause alterations of
certain  physiologic processes, such as osmoregulation and respiration.   Toxic
substances such  as metals, aromatics,  and  chlorinated  hydrocarbons  can  cause
a  wide  variety  of   concentration-dependent    problems,   including  death,
pathologic  diseases,  behavioral  changes, and  interruption  of  physiologic

                                      159

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processes among plankton,  benthos,  and fish.  Pathogenic bacteria  and  toxic
substances may make certain seafoods unmarketable.

     The results of these impacts may include:   changes  in  density, biomass,
and  community  composition of plankton, benthos,  and  fish;  decreased primary
productivity;  long-term  subtle  physiologic,   behavioral,   and  pathologic
effects,  possibly  causing   decreased  ability  to  compete  for  available
resources and  to reproduce;  altered  food  webs;  and loss  of  revenue  from
contaminated seafoods.  Nutrient  inputs  from domestic effluents may serve as
a  boon  to overall  productivity in  nutrient-limited  systems; but  community
changes  due  to competitive  exclusion and  toxicity  of toxic  substances  may
also occur.

VI.  C.  7.   Commercial and sports fisheries.  To many people these activities
may  not  seem to constitute  a perturbation.  Usually a thriving  fishery  is
indicative of good water quality and a healthy ecosystem.  However, a variety
of  stresses are  indeed  imposed  upon  some biota  as  a  result  of  these
activities,   not the  least of  which is  excessive selective removal of  the
target species.  The  sensitive biota (Table  11)  are  those  which  are sought
and  those incidentally  killed or injured.   The  sensitive habitats are  those
in which the fishery is usually harvested.

     The  biological effects  of fisheries  activities vary  greatly  with  the
type  of gear  used  and the  target species.   The  most obvious  impact  is
selective removal  of  large  numbers of  the target  species, a  decrease  in
density  that otherwise  would  not  occur.   Direct  effects  often occur  to
predators, many of  which are target species of  commercial fisheries.  If the
target species  is an  important prey species, as in the case of  herring  and
shrimp, prey resources  for predators would  be  decreased.   Another impact is
death  or injury  of  incidentally-caught  nontarget  fish and shellfish  and
entanglement and  drowning of diving birds  and  marine mammals.  Entanglement
and  drowning of some  birds,  such  as  Western  Grebes, may  increase if  all
fishery  seasons are  extended  into winter.  Loss or disruption  of bottom
sediments and  epifauna by  dragging (trawling)   and hydraulic  equipment  can
occur.   Hydraulic  and  hand  equipment  for  digging  in  the  bottom disrupts
sediments, especially in shallow muddy habitats.  Disturbance of marine birds
and mammals by passing boats and equipment can cause  these animals to flee.

     Removal  of  prey  and/or  predator  species  can  result  in  changes  in
prey-predator  relationships,  food   web  structures,  community  changes,  and
decreased standing stock of target  and nontarget species.   Decreased benthos
species  richness would  result from  disturbance  or removal  of  substrate.
Emigration of species sensitive to disturbance would  occur if the disturbance
was  continuous  or repeated  often,  though many  may  return  quickly after the
disturbance is discontinued.

VI.  C.  8.   Mariculture.  This  is a  relative new industry in the Puget Sound
area  and  little is  known of  the  effects  of mariculture operations  upon the
surrounding environment.  However, at least  three problem areas are apparent:
fecal waste  inputs from  the population  being  cultured, attraction  of some
birds and disturbance of others, and alteration  of nutrient levels.
                                    160

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     Fecal waste  inputs,  which could  be  sizable  and  poorly dispersed  in
protected bays or inlets, could be expected to impact nearby, or,  in the case
of suspended or floating racks  or  pens,  underlying  benthos.   Modification of
the substrate, increased B.O.D.,  burial, and smothering of  organisms  due to
sedimentation of feces and excess  .food may occur.   The operational equipment
may attract some birds,  especially fish-eating  species,  gulls and crows, and
disturb others.  Decomposition  of  animal wastes and excess food may increase
nutrient levels, while photosynthesis of cultured algae populations may strip
the surrounding water of nutrients.

     Overall,  changes in  benthos,  bird,  and  plankton  communities may  be
expected.   In a worst-case  situation,   bottom  sediments may  become abiotic
directly underneath a floating or  suspended animal  culturing operation.

VI.  C.  9.   Recreation,  educational  activities, scientific  collection.   As
with  fisheries  (above)  these  activities  are   not often  considered   to  be
harmful  to  the marine environment.   In  most  cases they are  not.   But when
performed often, or by many people, they  can cause  severe problems,  including
death or disturbance of biota.

     Two widely differing impacts  are possible.  The first, removal,  trampling
and  death of  epibenthos,  is often  restricted  to  rock  and  cobble  habitats.
These impacts  result from vandalism,  running or walking  on rocks, and recrea-
tional  or scientific collection  of intertidal  biota.   Collection of  inter-
tidal biota is restricted in  those areas designated as marine  preserves.

     The  second,  disturbance, occurs as  a result  of boating and aviation in
areas,  especially bays,  where marine birds congregate; boating in areas near
where marine mammals haul out (e.g.,  isolated rocks,  islets,  and  sand spits);
and  beachcombing, horseback  riding,  motorcycle riding, etc. on beaches where
nesting,  roosting, pupping,  or  rearing activities of birds and mammals  occur.
Unintentional  disturbance  of bird nesting colonies has  been known  to  result
in crows  taking eggs  from unattended  nests.   Scuba  diving  and snorkeling near
colonies,  roosts, and  haul-out  sites, along with sport  fishing from boats in
adjacent  kelp beds,  may keep birds off  nests  and  under stress  for extended
periods.   As  a  result,  chilled   eggs,  young   stressed  by heat  or  cold, or
predation on eggs or young  may occur.   Disturbance of  foraging  cetaceans by
recreational  boaters can  potentially disrupt  feeding  patterns  or  interfere
with mother/calf  relationships.

     Changes  in epibenthos community structure would occur  in areas severely
or repeatedly  impacted.   Decreased  bird and  mammal  population  sizes  would
occur   if adults  emigrated  to   other   areas  or  reproductive  success was
impaired.  Also  if  these population sizes decreased,  prey  communities may
change  due  to lack of predator pressure.

VI.  C.  10.  Miscellaneous.   Biological  impacts could potentially arise  from
other  human activities  in  the area.  These  impacts would vary  in  magnitude
and  type according  to the  activity.
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     Atmospheric fallout  of  radioisotopes, fly ash,  soot,  or acid  rain are
possible, especially from major industrial activities within  or  adjacent to
the study area.  Acid rain is  known to cause  pH problems in the northeastern
United States  lakes  that  lead  to diminished  fish  populations  there.   Atmos-
pheric fallout is not controllable, though source emissions are.

     Maritime  traffic   (nonspill  related)  can   cause  bird   and   mammal
disturbance  in open water and the  habitat modification problems  described
above can result from the construction of port facilities.  Oiling  of birds
by bilge wastes can occur.

     Dissolved  and  particulate  aluminum  refinery  effluents  may  decrease
receiving-water quality and smother benthos adjacent to the plants.   Overall,
biological effects may  be difficult  to  measure.   Power plant  effluents may
affect the receiving-water by  increasing water  temperature,  killing plankton
and fish  due to  entrainment  and  impingement  and inputs of biocides  such as
chlorine.  Changes in community structure and density, reproductive success,
metabolic rates,  and feeding  activity may occur.

     Toxic chemicals  such as  metals,  petroleum hydrocarbons, and  synthetic
chlorinated  hydrocarbons  may cause biological  impacts.  These  chemicals can
reach the biota either through  historical or on-going inputs.   They can cause
a wide variety of  histopathological diseases,  similar  to  those  found nearby
in the  waterways near  Seattle and Tacoma;  changes in  benthos  communities;
death among  plankton and  bivalve  larvae; and decreased reproductive  success
among birds.   Elevated levels of toxic chemicals have been found in sediments
collected in Bellingham  Bay,  Port Angeles  harbor,  and southern Strait  of
Georgia.

     Although  no  large  urban  areas  exist in the  study area,  the  potential
exists for low level chronic  stress  on  water  quality  there by  influxes of
pollutants from  adjacent areas.   Transport  of pollutants  from the  Fraser
River/southern Strait  of Georgia  system and  from the  main  basin of Puget
Sound pose the greatest potential threats.  Mixing of water  masses  carrying
chlorinated organics, petroleum hydrocarbons,  and trace metals is possible.

VI. D. Potential for cumulative and long-term subtle effects

     The  perturbation  types  and  associated effects  discussed above  do not
occur singly or  in a vacuum.   Antagonistic or  synergistic  effects  can occur
where  two or more  perturbations  have  opposite  or   additive  influences,
respectively.  In the case of oil spills, an antagonistic perturbation may be
a  high-nutrient,  high-temperature   effluent  that   results   in  increased
microbial decomposition of  the spilled  oil  in an area where decomposition
normally  is  limited by  nutrients  and  temperature.   Oil  spills may cause
greater effects in areas receiving continual low-level hydrocarbon discharges
than in areas without these additional inputs.

     Biological stresses such as molting, along with physical factors such as
weather  or   freezing,   can  create  synergistic  situations  among  biological
communities.    Cumulative  effects  may result  from repeated   stresses  that,
individually, have little or  no effect.


                                      162

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     Visibly dramatic effects, such as a massive fish or bird mortality, from
acutely  toxic  perturbations,  usually  are  ephemeral  in nature.   Biologic
systems have evolved to quickly mediate such short-lived insults, even though
they may be  extensive  in scope.  Rapid dispersal,  dilution,  and biodegrada-
tion of toxicants; recruitment and recolonization by organisms from adjacent,
healthy habitats; and increased  population  growth  of residual organisms will
act  to  facilitate  the  recovery  of  the  endemic  community.   Sublethal  or
chronic perturbations which persistently impact a habitat, on the other hand,
have  the  potential  to  cause  significant  changes  in   the structure  and
productivity of the community.  The fact that these  subtle insults usually go
undetected  or  take  a  long  time  to manifest  themselves  as  an  identifiable
problem, attributable  to a  known perturbation,  implies  that  the  long-term
effects  are  potentially  the  more  deleterious  and  the recovery  of  the
community more prolonged.   Chronic perturbations  in the  form  of pollutants
can be  the  result of either  continuous introductions of low-level concentra-
tions or the entrapment  of a large concentration of pollutant and subsequent
leeching of toxic components from that source.

     The potential  mechanisms  of damage  to the  community  are  diverse and
their effects vary according to habitat type  (Malins,  1977; Simenstad et al.,
1979).   The productivity of  the community  can be  depressed through direct
alteration  of  growth,  metabolism, and  reproduction  of  either  producer  or
consumer organisms and indirectly through the removal  of habitat.  The latter
affects  primary producers the  most, where the reduction of nutrients, light,
or the  availability  of  substrate  (in  the  case of attached plants) can reduce
the amount  or  rate  of  carbon fixed.  Communities in all habitats are vulner-
able  to such  effects  but  those of  contained  embayments,  where restricted
water  circulation and  fine  sediments  tend to  accumulate pollutants,  would
appear  to  be  particularly  susceptible.   Phytoplankton  productivity  in the
bays  and associated with water  over  nearshore  mud, nearshore  mud-sand, and
nearshore   mud-gravel   habitats   and   the  production  of  eelgrass  in  the
intertidal/subtidal  mud, mud-sand,  and  mud-gravel  habitats would  be most
susceptible  to sublethal  disruption  of  water-borne  pollutants (especially
oil),  as would the  associated neritic and  epibenthic  zooplankton communities
in these habitats.

      Changes  in  food  resources,  although  often involving  only qualitative
shifts   in   community   structure,  can  result  in  subsequent   changes  in
populations of consumer organisms.  In general, most consumers are adapted to
exploit  a  restricted portion of  the  prey community  available  to them, thus
minimizing  the deleterious effects of competition  with  other  organisms and
their vulnerability  to  predation.   Selective reduction of the principal prey
of  dominant consumer organisms  will  thus  force the  consumers  to  switch to
"less than  optimum"  prey and,  at a minimum, result  in.  lower  total production
or,  at  an  extreme,  cause  the  exclusion  of  the  species.    Neritic  and
epibenthic  zooplankton-eating  fishes,  especially larvae and  juveniles, would
appear  to  be  extremely  sensitive  to such a  perturbation.   These  fishes
include  juvenile  Pacific salmon,  herring,   and  sand lance  in  nearshore and
offshore habitats.   And,  consequently,  the production  of  young by Rhinoceros
Auklets, which feed  extensively  upon  these fishes in those habitats adjacent
to  Protection  Island  during nesting  season,  may  also be  limited  by  their
dependence  upon this unique  food  resource.

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     Selective  effects  upon particular  components of  the community  may be
even more far-reaching, as in the case of keystone species.  These dominants,
by  their  selective  predation  on  competitively  dominant  species at  lower
trophic  levels or by their  own competitive  dominance,  fill  key roles in
structuring the character  of  the nearshore community.  Significant reduction
of such species or inhibition  of their  predator or competitor functions will
likely  drive  the community  toward  a  new,  different  structure which,  in
itself,  may   become  ecologically   stable.    Two  habitats  would  be  most
susceptible  to  such an   alteration.   The  subtidal  rock habitat  supports
several  predacious  starfish   (Pisaster  ochraceus,  Leptasterias  hexactis,
Pycnopodia  helianthoides)   and  herbivorous  sea  urchins   (Strongylocentrotus
spp.) which constitute keystone  species in their maintenance of the community
structure  as  we  know  it.   Most of  these species  (at  least  the nonbrooding
species) are  also known to have very intermittent  and  often  low recruitment
such  that  significant reduction in their abundance  or  in their reproductive
potential would probably result in  a sustained modification of the nearshore
community  structure  for years or decades.  If  an impact  occurs to the star-
fish only, the sea urchin  population may proliferate.  Then the production of
macrophytic algae could be reduced  dramatically by increased grazing.  Also,
a  probable  secondary consequence may include  reduced detritus  input  to food
webs  in  the  region.   In the intertidal/subtidal  mud and mud-gravel habitats
predatory  gastropods and  large infaunal  bivalves  play similar  roles  and,
coincidentally, also have  low rates of recruitment.

     The  actual  physiological  and  pathological  condition  of  individual
organisms  can also be directly  affected by perturbations involving a subtle
decrease  in  water quality.   Increased  vulnerability  to histopathological
diseases,  if  not  resulting in  direct mortality,  can increase  the suscepti-
bility  of  the diseased organism to predation  or reduce  their competitive
advantage  such   that  the  population  can  be  measurably  affected.   Some
pollutants have been implicated as mutagenic  agents and,  as  such,  could be
responsible for adverse changes in  physiological or morphological character-
istics of future  generations or ovigerous  organisms influenced by the pollu-
tant.  Agents  which have been implicated in these effects  include chlorinated
hydrocarbons   (pesticides),  heavy  metals,  polychlorinated  biphenyls,  and
aromatic  hydrocarbons.    Sensitive   habitats   have  included  soft-sediment
subtidal regions  adjacent  to heavy  industrial and  agricultural  runoff.   In
the case of  the northern  Puget  Sound-Strait of  Juan de Fuca region,  epiben-
thic and benthic  communities of  subtidal  protected mud habitats are the most
likely to  face such  an  insult, especially  those  associated  with contained
embayments with low  flushing  and turnover rates  of the  water mass  within.
Harbors and marinas would be additionally sensitive.

     In examining  the overall  susceptibility  of  the  various  habitats in the
region to extended sublethal  effects, it is apparent that the soft sediment
habitats are the most vulnerable.  They have a tendency to  entrain pollutants
within the  sediments, often preserving  their  toxic  effects until  they are
released at a later  date.   They can  be  released  either physically  (through
erosion) or biologically  (via  burrowing  infauna) and thus made available to
incorporation  into the food web.  The fact that these habitats  tend to be the
most  productive  in  the region and  are almost  completely  based upon  the
decomposition  of detritus  makes  them even more susceptible  to alteration.  As


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mentioned previously,  the  sorption  of  pollutants upon detrital particles may
constitute one  of the most  important  pathways  by  which a pollutant  may  be
transported through  food web linkages, potentially  causing  subtle  but long-
term effects upon the organisms at each trophic  level.
                                      155

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              VII.   DATA EVALUATION, DATA GAPS, RECOMMENDATIONS


VII. A. Evaluation of the MESA/WDOE Data Set

     In compiling  this  synthesis, we  have probably tended  to overemphasize
the data gaps and  unanswered questions resulting  from  our  interpretation of
the voluminous baseline  study  data.   This tendency, however,  is  the logical
result  of  both  scientific  hindsight  and  the  problem  of  addressing  a^
posteriori questions about ecological  processes  based upon  a purely descrip-
tive data  base.   We believe  the basic knowledge  gathered  during  these  two
studies is important, for we would not be in  the  position  of projecting the
various processes and impacts discussed above  in Chapters V  and VI  if we had
only the meager, fragmented  data on nearshore communities which existed prior
to 1974.

     The  list  of  advances   achieved  during  the  biological  studies  is  too
lengthy to  enumerate in full,  but the major  accomplishments unique  to  the
.state of the science in this region should be noted:

     1.   The  first  systematic  documentation   of   community   (taxonomic)
          structure, density, and  standing crop  in representative (parallel)
          intertidal/subtidal and nearshore habitats for  a  broad  spectrum of
          the communities,  from macroalgae to marine mammals;

     2.   Characterization of plankton, birds, and mammals in offshore (deep)
          waters;

     3.   Quantitative documentation  of  seasonal  and  annual variations  in
          species abundance  and community parameters;

     4.   A  synthesis  of trophic  structure  and  prey-predator  interactions
          among the major organisms on a habitat basis;

     5.   Distributional and taxonomic clarification   or  extension  of  many
          groups, especially the crustaceans;

     6.   Baseline  levels  of petroleum  hydrocarbons  that  organisms  in  the
          nearshore  habitats  are  now   exposed  to  relative  to  existing
          (potential) sources of chronic  release and to locations beyond the
          influence of any known sources;

     7.   The first  controlled  oil spill  experiments on  in situ  intertidal/
          shallow  subtidal  communities   in   the   region  and  quantitative
          documentation of the community response and recovery rates;
                                     166

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      8.  Synthesis of available data collected on biota of the region;

      9.  The  processes  and  controlling  factors  of  oil  degradation  by
          microorganisms;

     10.  Identification of relationships between the physical processes that
          could disperse and  transport  oil spills and the important biologi-
          cal populations and communities that may be adversely affected;

     11.  Statistical analyses of baseline data and estimates, based upon the
          results of these analyses, of the utility of the data in predicting
          or assessing  damage caused by a major  perturbation  such  as an oil
          spill;

     12.  Development  of  a shoreline  oil-sensitivity index for  habitats  of
          the region and mapping of the extent of these habitats.

Additional work involving oceanographic  processes are  summarized  in Cannon
(1978) and Holbrook et al. (1980).

     While some  elements  of  the  biological  research had  been  described for
northern  Puget  Sound,  especially  in  the  region  of  the  University  of
Washington's  Friday Harbor   Laboratories  on  San  Juan  Island,  essentially
nothing was  known  about the  nearshore  or offshore  communities  and habitats
along  most   of  the  Strait of  Juan  de  Fuca.   This  was completely  virgin
territory for the intertidal ecologist as well as the fisheries biologist and
marine mammalogist.

VII. B. Data Gaps

     Despite the extensive  regional data base developed  in  the  past five  or
six years and described above,  both topical and  geographic  data gaps exist.
Only the macrobenthos ( >1 mm) were sampled, except in the case of epibenthic
zooplankton.   No quantitative data  exists  for  the meio- or microfauna or the
microflora.   Very  little  quantitative data exist  for deep offshore benthos,
so it was omitted  entirely in this repott.  Except  for  the  one-time collec-
tion of  epibenthic  zooplankton,  no nearshore  or  intertidal/shallow subtidal
plankton (including ichthyoplankton) data  have been collected.   No  quantita-
tive offshore  fish sampling  was  done.   Offshore fish  information  given  in
this report  is,  therefore, largely  qualitative.   No research was  performed
expressly to learn  the  ecological relationships  of most communities; popula-
tion  counts  were  emphasized.   Marine  mammal  studies  emphasized  easily
observed pinniped  populations;  abundance and distribution of  cetaceans were
poorly documented.   No data were collected for the saltmarsh habitat.  Little
work was done on subtidal rocky-reef kelp bed fishes.

     Perhaps the  most  significant  topical data  gap  is production  or  rate
information.   Studies  in the  region  on benthic  primary production, general
secondary and tertiary  production,  and bacterial and  fungal  degradation are
almost totally lacking.  The data accumulated to date addresses only standing
stock, not the rate of energy flow through the biological system.


                                     167

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     Geographic gaps  were implied  in the  introduction.   The boundaries  of
this  report were  artificial  and  did  not  necessarily follow  the  natural
boundaries  of  any  system.   The  northern boundary  of  the study  was  the
Canadian border, not  the natural northern boundary of this  system.   Little
work was  performed  in the  southern Strait of  Georgia, particularly  in  the
Canadian portions.   The western boundary was Cape Flattery,  thus  omitting the
outer  coast.   The  west   side of  Whidbey  Island was  part  of  the  eastern
boundary thus leaving out the Saratoga Passage/Skagit Bay area.   The southern
boundary was  Admiralty  Inlet  omitting all  of  Puget  Sound  proper and  Hood
Canal.   Relatively  few  intertidal  benthos  and  nearshore  fish  data  were
collected in the interior  of the San Juan  Islands  compared  to other  regions
within the study area.

VII. C. Recommendations for Further Research

     Data needed to  more  fully understand the biology of the area include:

       -  productivity estimates  and population  characteristics  of  dominant
          species;

       -  statistically-derived sampling designs for benthos;

       -  distribution and  abundance  of  those  biota  not  yet  surveyed  -
          cetaceans, nearshore plankton, rocky-reef fishes,  meiofauna;

       -  comprehensive survey data  for nearby  areas not yet studied  - Puget
          Sound, Hood Canal,  areas  east  of  Whidbey  Island,  outer  coast,
          adjacent  Canadian waters;

       -  energetics of intertidal/subtidal communities and relative roles of
          phytoplankton,  attached plants,  and benthic  diatoms in productiv-
          ity;

       -  relative  importance of intertidal/subtidal habitats in reproduction
          and rearing of  young animals;

       -  recruitment dynamics of intertidal communities;

       -  functional relationships between prey and predators;

       -  systematic  monitoring  of  benthos,  marine mammals, and birds  at
          selected  protected areas;

       -  reliability  of and variability  in marine  bird and mammal census
          data;

       -  quantification of prey uptake by marine birds, fish, and mammals;

       -  rates of interactions of birds and mammals with fisheries;

       -  further  definition  of  the  relative   abundance  of  epibenthic
          zooplankton at major habitat types;


                                      168

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method  for  rapidly assessing harbor seal populations  in  the event
of an oil spill; and

relative importance of roosting/nesting sites and hauling-out sites
for birds and mammals,  respectively,  and  movements of animals  to
and from these sites.
                            169

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Mercer,  R.  W., B.  D. Krogman,  and R. M. Sontag.   1978.  Marine  mammal  data
     documentation for  the  platforms   of  opportunity  project   and  OCSEAP
     program.  NWAFC Proc.  Rept.,  U.S. NOAA,  Seattle, Wash.  April  1978.

Miller,  B.  S.  and  others.   1978.   Nearshore fish survey.  Washington Dept.  of
     Ecology,  Puget Sound Baseline Program.   Appendix D.  January  1978.  .

Miller.  B.  S.,  C. A.  Simenstad,   J.  M.  Cross,  K.   L.  Fresh,  and S.  N.
     Steinfort,    1980,   Nearshore  fish  and macroinvertebrate  assemblages
     along  the  Strait of  Juan  de Fuca  including food habits of the common
     nearshore fish.   Dept.  of Com./EPA Interagency Energy/Environment R&D
     Program Report EPA-600/7-80-027. 211  pp.

National Commission on Water  Quality. 1975.   Puget Sound Regional  Assessment
     Study.    Prep,  by  Stevens,  Thompson,  and  Runjan,  Inc.   June  1975.
     Appendix, Part  1.

 Nyblade, C. F.  1977.  North Puget  Sound intertidal study  (UW).   Washington
     Dept.  of  Ecology, Baseline Study Program.   Appendix F.  April  1,  1977.

 Nyblade, C. F.   1978.   The  intertidal  and  shallow  subtidal  benthos of  the
      Strait of Juan de Fuca, spring  1976-winter 1977.   NOAA  Tech.  Memo.  ERL
     MESA-26,  MESA Prog., Environ. Res. Lab.,  Boulder,  Colo.  156  pp.

 Nyblade, C. F.  1979a.  The  Strait  of  Juan de  Fuca  intertidal and  subtidal
     benthos,   second  annual  report,  spring   1977-winter  1978.   Dept.  of
      Comm./EPA    Interagency    Energy/Environment   R&D   Program    Report
      EPA-600/7-79-213.   129 pp.

 Nyblade, C. F.    1979b.   Five  year   intertidal  community  change.   San  Juan
      Islands,  1974-1978.  Washington Dept.  of Ecology Baseline Study Program,
      North Puget Sound.  Appendix  F  (update).   August 1979.

                                      174

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Osman,  R.   1978.   The influence of seasonality and stability upon the species
     equilibrium.   Ecol.  59(2):383-399.

Paine,  R.  I.   1966.   Food  web complexity  and  species diversity.   Am.  Nat.
     100(910):65-75.

Palmer, R. S.   1976.   Handbook  of North  American  Birds, Vol.  2,  Waterfowl
     (part 1).   Yale Univ. Press, London.   519 pp.

Parsons,  T. R., R.  J.  LeBrasseur, J.  D.  Fulton,  and 0.  D.  Kennedy.   1969a.
     Production  studies  in  the   Strait  of  Georgia.   Part  II.   Secondary
     production under the Fraser River plume, February  to May  1967.   J.  Exp.
     Mar.  Biol. Ecol.  3:39-50.

Parsons,   T.  R. ,  K.  Stephens,  and  R.  J.  LeBrasseur.  1969b.   Production
     studies in the Strait of Georgia.  Part I.  Primary  production under the
     Fraser River  plume, February  to May  1967.   J.  Exp.  Mar.  Biol.  Ecol.
     3:27-38.

Parsons,  T. R., R.  J.  LeBrasseur, and W.  E. Barraclough.   1970.   Levels  of
     production in the  pelagic environment  of the Strait of Georgia, British
     Columbia:   A review.  J. Fish. Res. Bd. Canada.   27(7):1251-1264.

Parsons,   T.  R.,  L.  J.  Albright,  and J.  Parslow.   1980.   Is  the  Strait  of
     Georgia becoming more eutrophic?  Can.  J.. Fish. Aquat.  Sci.  37(6):1048-
     1054.

Pavlou, S. P., R.  N.  Dexter,  and  W.  Horn.   1977.   Polychlorinated  biphenyls
     (PCB's)  in  Puget  Sound:   Physical/chemical  aspects  and  biological
     consequences.   In:   The  use,  study,  and  management  of  Puget  Sound.
     Proceedings,   March  23-25.    Univ.   of  Washington,   Seattle,   Wash.
     pp.  100-133.

Pavlou,  S.  P.  and  W.  Horn.   1979.   PCB  removal  from  the  Duwamish  River
     estuary:    Implications  to  the  management  alternative  for the  Hudson
     River  PCB   cleanup.    In:    Health   effects   of  "halogenated  aromatic
     hydrocarbons.  Annals of the New  York  Academy  of Science, Vol. 320, pp.
     651-671.

Petipa, T.  S.,  E.  V.  Pavlova,  and  G.  N.  Midonov.   1970.   The   food  web
     structure, utilization, and transport  of energy by trophic  levels in the
     planktonic communities.   In:   J. H.  Steele  (Ed.),  Marine Food Chains,
     Oliver and Boyd, Edinburgh,  pp.  142-167.

Phillips,  R.  C.    1974.   Temperate  grass  plots.    In:   H.  T.  Odum, B.  J.
     Copeland,  and  E.  A.  McMahan (Eds.),  Coastal  Ecological  Systems of the
     United States, Vol. 2.  Conserv.  Found., Washington, D. C.  pp. 244-299.
                                     175

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Pingree, R. D., M; J.  Bowman, and W. E. Esaias.   1978.   Headland fronts.  In:
     M.J. Bowman  and W.  E.  Esaias (Eds.), Ocean Fronts in Coastal Processes.
     Proc. Workshop, Mar. Sci.  Center, State University  of  New  York,  Stony
     Brook, N.Y., May  25-27, 1977.  Springer-Verlag,  Berlin,   pp. 78-86.

Pitcher,  K.  and  D.  Calkins.   1979.   Biology  of  the  harbor  seal  (Phoca
     vitulina  richardii)  in the  Gulf  of Alaska.  Final Kept.,  RU  229.   In:
     Environmental  Assessment   of  the  Alaskan  Shelf.   Annual  Reports  of
     Principal  Investigators.   U.S.  Dept.  Comm./NOAA,  Environ. Res.  Lab.,
     Boulder, Colo.  72 pp.

Pizzo,  J.  T.,  T.  L.  Johnson,   and  G.  W. Harshman.  1978.   Washington State
     refineries:  Petroleum, petroleum  derivatives,  and wastewater  effluent
     characteristics.   U.S.  Dept.  Comm./EPA Interagency  Energy/Environment
     R&D Program Report No.  EPA-600/7-78-040.  March 1978.   169 pp.

Rattray,  M.  Jr.   1967.  Some  aspects  of  the dynamics  of circulation  in
     fjords.    In:   G.  H. Lauff (Ed.),  Estuaries.   AAAS,  Washington,  D.  C.
     pp. 52-62.

Robinson, D.  G., W. E. Barraclough,  and J.  D.  Fulton.   1968a.   Data record:
     Number,  size, composition, weight,  and food of larval and juvenile fish
     caught with  a  two-boat  trawl in the Strait of  Georgia, May 1-4,  1967.
     Fish. Res. Bd. Canada.   MS  Rept. Ser. 964, Pacific Ocean Group, Nanaimo,
     B. C.  105 pp.

Robinson, D.  G.,  W. E.  Barraclough, and  J.  D.  Fulton.  1968b.  Data record:
     Number,  size, composition,  weight, and food of  larval and juvenile fish
     caught with a two-boat  surface trawl in the Strait of Georgia,  June 5-9,
     1967.  Fish. Res. Bd.  Canada.   MS Rept. Ser. 972,  Pacific  Ocean Group,
     Nanaimo, B. C.  109 pp.

Robinson, D.  G.  1969.   Data record:  Number, size,  composition,  weight,  and
     food of  larval and juvenile fish caught with a two-boat surface trawl in
     the Strait of Georgia,  July 4-6, 1967.   Fish. Res, Bd. Canada.   MS Rept.
     Ser. 1012, Pacific Ocean Group, Nanaimo, B. C.  71 pp.

Rugh, D.  J.  and H. W.  Braham.    1979.   California gray whale (Eschrichtius
     robustus)    fall   migration  through  Unimak  Pass,   Alaska,   1977.    A
     preliminary report.   Rept.  Int. Whale Comm.  29:315-320.

Seki,  H.   1966.  Role of bacteria  as  food for  plankton.   (Review) Inform.
     Bull. Planktol. Japan  13:54-62.

Simenstad,  C.   A., W.  J.  Kinney,  and  B.   S.  Miller,   1980.   Epibenthic
     zooplankton  assemblages at selected sites  along  the  Strait of  Juan  de
     Fuca.   NOAA Tech.  Memo. ERL MESA-46,  MESA Prog.,  Environ. Res.  Lab.,
     Boulder, Colo.  73 pp.
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Simenstad, C. A.,  B.  S.  Miller, J. N.  Cross,  K.  L. Fresh, S. N.  Steinfort,
     and  J.   C.   Fegley.   1977.   Nearshore  fish  and  macroinvertebrate
     assemblages along the  Strait  of  Juan de Fuca  including  food habits  of
     nearshore fish.  NOAA Tech. Memo.  ERL MESA-20, MESA Prog., Environ.  Res.
     Lab., Boulder, Colo.  144 pp.

Simenstad,  C.  A.,  B. S.  Miller,  C.  F.  Nyblade,  K.  Thornburgh,  and L.  J.
     Bledsoe.  1979.  Food web relationships of northern  Puget Sound  and the
     Strait  of  Juan  de Fuca.   U.S.   Dept.  Comm./EPA  Interagency  Energy/
     Environment R&D Program Report EPA-600/7-79-259.   335 pp.

Smith,  G.  F. and  H.  H.  Webber.  1978.  A biological  sampling of  intertidal
     habitats of northern Puget Sound.   Washington Dept. of Ecology,  Baseline
     Study Program, North Puget Sound,  Appendix K.  September 1978.

Smith,  G. F.   1979.  A quantitative sampling program  of benthic communities
     in nearshore subtidal areas within the Rosario Strait region of northern
     Puget Sound,  Washington State,  1976.  Washington  Dept.  of  Ecology,  Oil
     Baseline Program, Appendix L.

Stephens, K.   1968.   Surface distribution of chlorophyll £ in the Strait of
     Georgia,  1966-1967.   Fish.  Res.  Bd. Canada.  MS Rept. Ser. 971, Pacific
     Ocean Group, Nanaimo, B. C.  25 pp.

Stockner, J.  G.,  D.  D.  Cliff, and K.R.S.  Shortbreed.   1979.  Phytoplankton
     ecology of the Strait of Georgia, British Columbia.  J.  Fish.  Res. Bd.
     Canada.  36:657-666.

Stockner, J. G., K. S. Shortbreed, and E. A. Maclsaac.   1980.  The benevolent
     strait:  Reply.  Can. J. Fish. & Aquat. Sci.   37(6):1048-1054.

Strickland, J.D.H.  1960.  Measuring the  production of marine phytoplankton.
     Fish. Res. Bd. Canada., Bull. 122.   172 pp.

Summers,  C.   and  M.  Mountfield.   1975.   Counting  the  common  seal.   Nat.
     253:670-671.

Sverdrup, H. U., M. W. Johnson, and R. H.  Fleming.   1942.  The oceans: their
     physics, chemistry,  and general biology.  Prentice-Hall,  Inc., Englewood
     Cliffs, N.J.   1087  pp.

U.S.  Bureau of Land  Management.   1979.   Final environment statement.  Crude
     oil  transportation  systems.   4 volumes.

Wahl, T.  R.,  S. M.  Speich, D. M. Manuwal, K. V. Hirsch, and C. Miller.   1981.
     Marine bird populations of the Strait of Juan  de Fuca, Strait of Georgia
     and  adjacent  waters in 1978  and  1979.  U.S. Dept. Comm./EPA  Interagency
     Energy/Environment  R&D  Program Report EPA-600/7-81-156.   789  pp.

Waldichuk, M.   1979.  Ecological impact of logs.  Mar.  Poll.  Bull.  10(2):33-
     34.

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Washington   Department   of   Fisheries/Washington   Department  of   Natural
     Resources.  1978.   Final environment impact statement for the commercial
     harvesting  of  subtidal  hardshell   clams  with a  hydraulic  escalator
     shellfish harvester.   April 1978.

Webber, H. H.  1980.   Whidbey Island intertidal and shallow subtidal benthos.
     U.S. Dept. Comm./EPA  Interagency Energy/Environment R&D  Program Report
     EPA-600/7-80-167.   91  pp.

Webber,  H.  H.   1981.   Growth  rates  of  benthic  algae  and  invertebrates in
     Puget Sound.  I. Literature  Review, and II.  Field  studies  on Laminaria
     hereocystis   NOAA  Tech.   Memo  OMPA-4,   Office   of   Marine  Pollution
     Assessment, Boulder,  Colo.  45 pp.

Wiens, J.  A.,   D.  Heinemann,  and  W.  Hoffman.   1978.    Community  structure,
     distribution,  and  interrelationships  of marine  birds in  the  Gulf of
     Alaska.  OCSEAP  Final  Rept.  RU 108,  Phase I.

Winter,  D.   F.,  K.  Banse,   and  G. C.   Anderson.    1975.   The dyanamics of
     phytoplankton  blooms  in Puget Sound, a  fjord in the northwestern United
     States.  Mar.  Biol.  29:139-176.

Wolcott,   T.  G.   1973.   Physiological   ecology  and intertidal  zonation in
     limpets (Acmaea).  A  critical look at  limiting  factors.   Biol.  Bull.
     145:422-   .

Woodin, S. A.,  C. F.  Nyblade,  F. Chia.   1972.   Effect  of diesel  oil spill on
     invertebrates.  Mar. Poll. Bull.   3(9):139-143.
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                                 APPENDIX I
                 AVAILABILITY AND ACCESSIBILITY OF DATA SETS
1.    Data Formats

          As new biological data are  generated,  they  are reported  in tabular
     form in  reports  and simultaneously  entered onto computer  tapes.   Both
     the MESA and WDOE data listed in Table  I-B  are,  or  will  soon  be,  avail-
     able in report form.  The reports contain narrative descriptive informa-
     tion about  the  data, tabularized  raw data, plots, and  histograms.   In
     addition, most of these  data are also available  on magnetic tape, where
     they were archived on standardized formats  (refer to the next  section on
     data acquisition).

2.    Data Acquisition and What to Expect

     a.    Reports

               MESA  and  OMPA  Technical  Reports  and  DOC/EPA  Interagency
          reports  found  in  Table  I-A  may  be  obtained from the   Office  of
          Marine Pollution  Assessment,  Pacific  Office,  RD/MPF25,   7600 Sand
          Point Way N.E.,  Bin C15700,  Seattle,  WA  98115  (206-527-6341;  FTS
          8-446-6341).   Washington Department of  Ecology  (WDOE) reports  are
          available from Mr. Fred Gardner, State of Washington, Department of
          Ecology, Olympia, WA  98504 (206-753-0577).

     b.    Magnetic Tapes

               Most of  the  data  identified  in Table  I-B are  available  on
          magnetic tape  or  diskette  in one  of  two forms:   (1) data received
          at  the  data centers that  have undergone only preliminary editing
          and (2) data that have been subjected  to some  degree of editing and
          quality  control and are considered final-processed.  Most  of  the
          data  sets   can be  retrieved  as  a  specific  file  type,  which  is
          defined  as   a   format  for  coding,  processing,   and  exchanging  a
          specific  category  of  ecological  and environmental  data.   Please
          refer to Table  I-C  for specific file type categories.

     c.    Tape Contents

               Magnetic  tape  outputs  can be  obtained  in  one of two forms. The
          first  (that most all file types may be obtained  in) is the raw data
          retrieval,  which  consists   of a  format  of  coded information.  The


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          coded  records  contain file  and  station  header  information  that
          indicate  the unique  file type,  file identifier,  cruise or  field
          period dates, geographic  location,  etc.  The  physical  or  biological
          records  contain  the  coded   sampling methods,  taxonomy, weights,
          counts,  station physical  parameters  (water  temp,  sea state,  tide
          information),   or  other   information pertinent   to   a   biological
          specimen's  condition  (external  or  internal).  Further information
          on specific  file types,  copies  of  formats for  specific  files,
          programs  for checking routines,  and  documentation may be obtained
          by contacting  the Environmental Data and  Information Service,  or
          locally,  the EDIS  Pacific Northwest Liaison Office,  Seattle,  WA
          98115  (206-527-6263;  FTS  8-446-6263).

              In addition, special  products  such  as nonformatted listings  or
          simple formatted tables have  been developed for retrieval of  Marine
          Birds  (FT041),  Marine Mammals  (FT027),  and  the  Intertidal/Shallow
          Subtidal Benthos  (FT100) data sets.   In  these outputs  data listings
          are  arranged  hierarchically and  typically   show  the  file   type,
          investigator  (FT100), tape  track, site,  location,  dates sampled,
          sample  elevation,  gear type, biological  name (taxonomy), counts,
          weights,  and possibly some simple  calculations  such as  biomass  or
          abundance, or behavior as  in  the Marine  Mammals  (FT027).

              Further  inquiries as  to data  availability and  how to  order
          tapes or listings should be made by contacting:

                   U.S.  Dept.  of Commerce/NOAA
                   Environmental Data  and Information  Service
                   National Oceanographic Data Center
                   2001  Wisconsin Ave., N.W.
                   Washington,  D. C.   20235
                   (202-634-7441; FTS  8-634-7441)

          or locally the  EDIS  Pacific Northwest Liaison Office.

              Additional information  regarding  MESA data sets,  special
          products, costs for  products, and  file  type  summaries is found  in
          the  Data Catalog  for the Marine Ecosystems  Analysis Puget  Sound
          Project,  Distribution and Summarization of  Digital Data (May  1980
          ed.).  Copies of  this document  are available  from  the OMPA Pacific
          Office or the EDIS Pacific Northwest  Liaison  Office.

              Benthos, fish,  plankton, bird, and mammal data were collected
          at the locations shown in  Figures  I-A through I-D and  Table I-C.

3.    Data  Set Error Identification and  Correction

          Data sets received by the  MESA Project from contractors are entered
     on cards  or  tape  in the  formats  described above.   They are initially
     checked for  gross   errors  such as  missing  items, parity  errors, and
     agreement  with   survey   dates  and   locations.    Some  research   groups
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    performed  their own  data  checks  (see Mercer  et al.,  1978  for marine
    mammal data checking  program).

         Subsequent   checking  is  performed  with  a  series  of   programs
    implemented by machine.  These checks  are  performed  to ensure  that the
    taxonomic codes  are reasonable; that  blank  spaces  are  correct and do not
    represent omissions;  that counts and  weights  are reasonable and  within a
    preestablished valid range; that the biological measurements data match
    the  field collection conditions data and vice versa;  and that the codes
    used for sampling  stations,  gear  types,  sampling conditions, etc., are
    reasonable.   Any questionable data sets or errors are resolved  with the
    principal  investigator  and corrections are  made  to  the  data  tapes by
    appropriate editing.

4.   Data Management Recommendations

         A  number of  things  have been  learned  through  trial  and error
    regarding  data  management that  may  be  of  interest  to  managers of
    subsequent  projects  similar to this one.    This  assumes,  though,  that
    management  elects  to archive the data  collected.   Given the amount of
    time and difficulty  experienced in this  project  in managing  and archiv-
    ing  data,  it  may  not be cost effective or worthwhile.  If the  data are
    to be manipulated  sometime in  the  future or as a part  of  the  reporting
    requirement;  if the  project  is large and multidisciplinary;  if  computer
    facilities  are  readily available; and if the  data   are collected  with
     standardized   quantitative  methods,   then  a  data  management/archival
    program is  recommended.

    a.   Formats

               Establish  the framework for each data format very early in the
          project, based  on  the known kinds of  data which will be collected.
          Finalize the  details  of the format (s)  with  the  concurrence  of the
          investigator(s).   Keep  the  formats simple,  as  cluttered,  detailed
          formats  are difficult to use.

     b.   Investigators

               Select   the   investigators,  in  part,  on  their  ability  to
          professionally  meet  data  management  requirements.   Those  with
          minimal previous experience, limited access to computer facilities,
          minimal  interest  in data  archival,  and little understanding of the
          resources required to properly manage data should  be avoided.

     c.   Proposed plan

               Review  the investigator's  data management  plan to ensure that
          it meets the  project  requirements.  Insist that  the data management
          activities  be  an integral  part  of  the  overall  investigator's
          management  plan.   Insist that  data products  (e.g,  tapes) be  pro-
          vided on a  regularly scheduled basis  along with reports,  meetings,
          etc.   If  necessary,   provide  in  the  contractual agreements  that

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     invoice payments will be  predicated  upon receipt of  deliverables,
     including data products.

d.   Quality control

          Require  early delivery  of  quality  controlled  digital  data
     sets, ensuring that the investigator has checked his own  data for
     accuracy and completeness.

e.   Data checking

          Either  establish  a   data  checking  program  or  acquire  an
     existing one for checking  delivered data sets.  Also  devise  a  plan
     for getting corrections,  if needed,  from the investigators.   It is
     critical to  have sufficient  time allowed  in  the  contract(s)  to
     review and  check data sets,  request corrections, receive  and  edit
     in corrections.  Establish rigorous  standards for required fields,
     codes, content, range  checks,  etc.

f.   Availability

          Provide equipment or  facilities for manipulation of data sets,
     following their  final editing.   Further problems  with data  sets
     often become  apparent when the  data are actually used  to  solve a
     problem.   For  example,  development  of  formatted tabular  listing
     programs may turn up  a  problem with data completeness that escaped
     previous checks.
                               132

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Table I-A.  Publications resulting from NOAA/MESA and WDOE biological studies


MESA

Chester, A. J.,  1978.   Microzooplankton in the  surface waters  of the Strait
     of Juan  de  Fuca.   NOAA Technical Report ERL 403-PMEL 30, Pacific Marine
     Environmental Laboratory, Seattle, Washington, 26 pp.  (NTIS PB-297233)

Chester, A. J.,  D.  M.  Damkaer, D. B. Dey, G. A. Heron, J. D. Larrance, 1980.
     Plankton of the Strait of Juan  de  Fuca,  1976-1977.   DOC/EPA Interagency
     Energy/Environment    R&D    Program   Report    EPA-600/7-80-032,   U.S.
     Environmental  Protection  Agency,   Washington,   D.  C.,  64  pp.   (NTIS
     PB80-190036)

Chester. A. J., D. M. Damkaer, D. B. Dey, and J. D. Larrance, 1977.   Seasonal
     distributions of plankton in the Strait of  Juan  de Fuca.  NOAA Technical
     Memorandum ERL MESA-24, Marine  Ecosystems Analysis Program,  Enviromental
     Research Laboratories, Boulder, Colorado, 71 pp.  (NTIS PB-281833)

Cross,  J.  N.,  K. L. Fresh, B.  S.  Miller, C. A.  Simenstad,  S.  N. Steinfort,
     and  J.   C.  Fegley, 1978.   Nearshore fish  and  macroinvertebrate assem-
     blages along  the  STrait of Juan  de Fuca  including food  habits of the
     common nearshore  fish.  NOAA  Technical Memorandum  ERL MESA-32, Marine
     Ecosystems   Analysis   Program,  Environmental   Research  Laboratories,
     Boulder, Colorado,  188 pp.  (NTIS  PB-292261)

Everitt,  R.  D.,  C.  H.  Fiscus,  and R.   L.  DeLong,  1979.  Marine mammals  of
     northern  Puget Sound and  the Strait  of  Juan  de  Fuca -  a  report  on
     investigations  November   1,   1977-October   31,   1978.   NOAA  Technical
     Memorandum    ERL    MESA-41,   Marine   Ecosystems   Analysis    Program,
     Environmental  Research Laboratories, Boulder, Colorado,  191 pp.   (NTIS
     PB-299287)

Everitt,  R. D.,  C.  H.  Fiscus,  and R. L.  DeLong, 1980.  Northern Puget  Sound
     marine  mammals.   DOC/EPA  Interagency  Energy/Environment  R&D   Program
     Report   EPA-600/7-80-139,   U.S.    Environmental    Protection    Agency,
     Washington, D.  C.,  134 pp.   (NTIS  PB81-127516)

Gundlach,  E.  R., C. D.  Getter,  M.  0.  Hayes, 1980.   Sensitivity of  coastal
     environments  to spilled oil,  Strait  of  Juan de Fuca and  northern  Puget
     Sound.   Informal  Report.   MESA   Puget  Sound  Project,  NOAA,   Seattle,
     Washington,  76  pp.

Long,  E.  R.,  1980.  Physical processes and  critical  biological  areas in the
     vicinity of a  proposed  petroleum transfer facility.  Conference Record
     Oceans   '80:   Ocean  Engineering  in  the   '80s.   Seattle,  Washington,
     Sept. 9-10,  1980.   IEEE Pub.  No,  80CH1572-7,  pp. 489-497,  Institute  of
     Electrical  and  Electronic  Engineers,  New York.
                                     103

-------
Table I-A (Contd.)
Manuwal,  D.  A.,  T.   R.   Wahl,  and  S.   M.   Speich,   1979.    The  seasonal
     distribution and abundance  of  marine bird populations in  the  Strait of
     Juan  de  Fuca  and  northern  Puget   Sound  in  1978.   NOAA  Technical
     Memorandum   ERL   MESA-44,    Marine  Ecosystems    Analysis   Program,
     Environmental Research Laboratories,  Boulder,  Colorado,  391 pp.   (NTIS
     PB80-130859)

Miller,  B.  S.,  C.  A.  Simenstad,  J.  N.  Cross,  K.  L.   Fresh,  and  S.  N.
     Steinfort, 1980.   Nearshore fish and  macroinvertebrate assemblages along
     the Strait of Juan de Fuca including  food habits  of the common nearshore
     fish.   DOC/EPA   Interagency  Energy/Environment  R&D   Program  Report
     EPA-600/7-80-027,  U.S.   Environmental  Protection  Agency,  Washington,
     D. C., 211 pp.  (NTIS PB81-155435, All)

Nyblade, C. F.,  1978.   The intertidal and shallow subtidal  benthos  of  the
     Strait  of  Juan  de   Fuca,  spring   1976-winter  1977.   NOAA  Technical
     Memorandum   ERL   MESA-26,    Marine  Ecosystems    Analysis   Program,
     Environmental Research Laboratories, Boulder, Colorado,  156 pp.   (NTIS
     PB-285703)

Nyblade,  C.  F.,  1979.  The  Strait of Juan de  Fuca  intertidal and subtidal
     benthos,  second  annual   report,  spring  1977-winter   1978.    DOC/EPA
     Interagency Energy/Environment R&D Program Report EPA-600/7-79-213, U.S.
     Environmental Protection Agency,  Washington,  D.   C.,   129  pp.   (NTIS
     PB80-142136)

Schoener, A.  and F.  B.  DeWalle,   1982.    Effects of  petroleum  on selected
     uniform  substrates:   a  feasibility   study.   NOAA  Technical Memorandum
     OMPA-18,  Office  of  Marine Pollution  Assessment,  Boulder,  Colorado,
     44 pp.  (NTIS PB82-232927)

Simenstad, C. A., W.  J. Kinney, B. S. Miller,  1980.   Epibenthic zooplankton
     assemblages at  selected  sites  along the Strait of  Juan de Fuca.  NOAA
     Technical Memorandum  ERL MESA-46, Marine Ecosystems Analysis Program,
     Environmental  Research  Laboratories,  Boulder,  Colorado,  73  pp.   (NTIS
     PB80-209596)

Simenstad,  C.  A.,  B.  S. Miller,  J.  N. Cross,  K. L.  Fresh,  S.  N.  Steinfort,
     and  J.  C.  Fegley, 1977.  Nearshore  fish and macroinvertebrate  assem-
     blages  along  the Strait   of  Juan  de  Fuca  including  food  habits of
     nearshore   fish.   NOAA  Technical   Memorandum  ERL  MESA-20,   Marine
     Ecosystems  Analysis   Program,   Environmental   Research  Laboratories,
     Boulder, Colorado, 144 pp.   (NTIS PB-297406)

Simenstad,  C.  A.,  B.  S.  Miller,  C.  F.   Nyblade,  K. Thornburgh,  and L. J.
     Bledsoe,  1979.   Food  web relationships of northern  Puget  Sound and the
     Strait  of  Juan  de  Fuca.    DOC/EPA  Interagency Energy/Environment  R&D
     Program Report EPA-600/7-79-259,  U.S. Environmental Protection Agency,
     Washington, D. C., 335 pp.   (NTIS PB80-169592)
                                    1 <"M
                                    los-

-------
Table I-A (Contd.)
Vanderhorst,  J.  R. ,  J.  W.  Blaylock,  P.  Wilkinson,   1979.   Research  to
     investigate effects from Prudhoe Bay crude oil  on intertidal  infauna of
     the  Strait  of  Juan  de  Fuca,  first  annual  report.   NOAA  Technical
     Memorandum   ERL   MESA-45,    Marine    Ecosystems   Analysis    Program,
     Environmental  Research Laboratories,  Boulder,  Colorado,  38  pp.   (NTIS
     PB80-160955)

Vanderhorst,  J.  R.,   J.  W.  Blaylock,  P.  Wilkinson, M.  Wilkinson,  and G.
     Fellingham, 1980.  Recovery of Strait  of Juan de  Fuca intertidal habitat
     following experimental  contamination with oil  (second annual report  fall
     1979-winter  1980).   DOC/EPA Interagency Energy/Environment R&D Program
     Report   EPA-600/7-80-140,   U.S.   Environmental  Protection   Agency,
     Washington, D. C., 73 pp.   (NTIS PB81-112518)

Vanderhorst,  J.  R.,  J.  W.  Blaylock,  P.  Wilkinson, M.  Wilkinson,  and G.
     Fellingham,  1981.  Effects  of  experimental  oiling on recovery of Strait
     of  Juan  de   Fuca  intertidal  habitats.   DOC/EPA  Interagency Energy/
     Environment  R&D  Program  Report  EPA-600/7-81-088,  U.S.  Environmental
     Protection Agency, Washington, D.  C.,  129 pp.   (NTIS PB81-247165, A07)

Wahl, T. R., S. M.  Speich, D. A. Manuwal,  K.  V.  Hirsch,  and C. Miller,. 1981.
     Marine bird  populations in  the Strait of Juan de Fuca,  Strait of Georgia
     and  adjacent  waters  in  1978 and 1979.   DOC/EPA  Interagency Energy/
     Environment  R&D Program  Report  EPA-600/7-81-156,  U.S.  Environmental
     Protection Agency, Washington, D.  C.,  789  pp.  (including 514 pp. micro-
     fiche Appendices).

Webber, H. H.,  1979.   The  intertidal  and  shallow subtidal benthos  of the  west
     coast  of  Whidbey Island, spring  1977 to winter 1978,  first year report.
     NOAA  Technical   Memorandum  ERL  MESA-37,   Marine   Ecosystems   Analysis
     Program,  Environmental Research  Laboratories, Boulder,  Colorado,  108 pp.
      (NTIS PB-295815)

Webber, H. H.,  1980.   Whidbey Island  intertidal and shallow subtidal benthos.
     DOC/EPA Interagency  Energy/Environment R&D  Program  Report  EPA-600/7-80-
      167,  U.S. Environmental Protection Agency,  Washington, D.  C.,  (91 pp.  +
     microfiche Appendix.   (NTIS PB81-151441)

Webber,  H.  H.,  1981.   Growth  rates  of  benthic  algae  and  invertebrates  in
      Puget  Sound:  I. Literature  review,  and II. Field  studies on  Laminaria
      and  Nereocystis.   NOAA  Technical Memorandum  OMPA-4,  Office  of Marine
      Pollution Assessment, Boulder, Colorado, 45 pp.  (NTIS PB81-223760)

 Zeh  J. E.,  J.  P.  Houghton, and  D.  C.  Lees,  1981.  Evaluation  of existing
      marine  intertidal   and  shallow  subtidal  biologic  data.    DOC/EPA
      Interagency Energy/Environment R&D Program Report EPA-600/7-81-036,  U.S.
      Environmental Protection Agency, Washington, D. C., 262 pp.  + microfiche
      Appendices.   (NTIS PB82-134065)


                                     185

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Table I-A (Contd.)
WDOE

If  NTIS  number Is  not given,  publication is  available through  DOE,  State
Library.

Beak  Consultants,   1975.   Biological  oil  impact  literature  review:   Oil
     pollution  and   the  significant  biological  resources  of  Puget  Sound,
     Vol. I, Final Report,  October 1975.

Beak  Consultants,   1975.   Biological  oil impact  literature  review:   Oil
     pollution  and   the  significant  biological  resources  of  Puget  Sound,
     Vol. II Bibliography,  Final Report,  October 1975.

Brittell, J. D., J.  M. Brown, and R. L. Eaton (Eds.), 1976.  Marine shoreline
     fauna  of  Washington,  Vol.  II.   Washington State  Department  of  Game,
     December 1976.   (NTIS  PB-265-978)

Eaton,  R.  L.,  1975.   Marine  shoreline  fauna  of  Washington,  Vol.  I.
     Washington State Department of Game, December  1975.   (NTIS PB-254-294)

English,  T. S., 1976.  Oil  pollution and the significant biological resources
     of Puget Sound, Open water  study.   University of Washington, Department
     of Oceanography, March 1976.

Gardner,   F.  (Ed.),  1977.   ,North  Puget  Sound  Baseline Study Main Report.
     1974-1977 Washington State Department of Ecology.

Isakson,   J.  S. (Ed.),  1977.   Washington  coastal areas  of  major biological
     significance.  Mathematical Sciences Northwest,  Inc., November  1977.

Miller,  B.  S.,  1978.  Nearshore   fishes,  Puget   Sound Baseline  Program:
     Nearshore  fish  survey,  University of Washington,  College of Fisheries,
     January 1978.

Nyblade,  C., 1977.  Oil pollution and the significant biological  resources of
     Puget Sound, North Puget Sound Intertidal  Study, April  1977.  University
     of Washington, Department of Zoology.

Salo,  L.  J.,   1975.   A  baseline  survey  of   significant  marine  birds  in
     Washington State.  Washington  State Department of  Game, September  1975.
      (NTIS PB-254-293)

WDOE,  1978.   Five  year intertidal community change San Juan Islands  1974-78
     and  the intertidal benthos of north Puget  Sound, summer 1978.

Webber, B., 1978.  W.W.U. Intertidal Report, September  1978.  Huxley College,
     Western Washington University.
                                      186

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     Table  I-B.   Biological  synthesis report:   Data sets
     Type of Data
Years
 of    Completion
Study	Date	Investigator (s)
   Form of Data
Data
File
Type
03
     MESA
      Strait  intertidal
      Whidbey  intertidal
      Strait  fish
      Whidbey fish

      Marine birds


      Marine mammals


      Strait plankton
  2     Nov. 79    Nyblade
        May  80    Webber
  3     May  80    Miller/Simenstad
  1     Dec. 78    Miller/Simenstad

  2     July 80    Manuwal/Wahl/Speich


  2     May  80    Everitt/Fiscus/DeLong


  2     Mar. 80    Chester
      Food webs               1     Sep.  79    Simenstad/Miller

      Oil effects,  recovery   2     Sep.  80    Vanderhorst


      Epibenthic plankton     1     Apr.  80    Simenstad

      Continued
Tape; MESA Report-26;
EPA Report 7-79-213

Tape; MESA Report-37;
EPA Report 7-80-167

Tapes; MESA Report-20;
MESA Report-32;
EPA Report 7-80-027;
Cross thesis

Tape; MESA Report-32;

Tapes; MESA Report-44;
EPA Report 7-81-156

Tapes; MESA Report-41;
EPA Report 7-80-139

Tapes; MESA Report-24;
EPA Report 7-80-032

EPA Report 7-79-259

MESA Report-45; EPA
Reports 7-80-140 & 81-088

MESA Report-46
100
100
100
041


027

024,
028,
029

-------
         Table I-B.  (Contd.)
         Type of Data
                      Years
                       of    Completion
                      Study	Date	Investigator(s)
                                                                                                        Data
                                                                                                        File
                                                                              Form of Data
CO
CO
         WDOE

         NFS plankton, larvae    1     Mar. 76    English
         San Juan Island
           intertidal
NFS intertidal


NFS subtidal


NFS fish


Fish data analyses


NFS baseline study

NFS fish


GPS fish
7     June 81    Nyblade



2     Sep. 78    Webber


2     Mar. 79    Smith


2     Jan. 78    Miller/Simenstad


2     Jan. 79    Miller/students


3     June 78    Gardner

      Jan. 79    Miller/Simenstad
                                       Feb.  79    Wingert/Terry/
                                                    Miller
WDOE report

WDOE reports: Oct. 75,
Apr. 77 (tape), Aug. 79,
Feb. 81, June 81

WDOE report:  App. K,
Sep. 78; tape

WDOE report:  App. L,
Mar. 79; tape

WDOE reports: Feb. 76,
Jan. 79; tape

Moulton thesis;
Wingert thesis

WDOE report:  June 78

WDOE final  report #78070
FRI-UW 7901

WDOE final  report #78062
FRI-UW 7903
                                                                                                        100
                                                                                                        100
                                                                                                        100

-------
Table I-C.  NODC file type formats for biological data collected
            in MESA studies.
       File Type 024          Zooplankton

       File Type 027          Marine Mammal Sighting 1

       File Type 028          Phytoplankton Species

       File Type 029          Primary Productivity

       File Type 041          Marine Bird Survey

       File Type 100          Intertidal/Subtidal
                                  189

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Table I-D.  Sampling site names for Appendix Figure I-A.
INTERT IDAL/ SUBTIDAL
Mixed Coarse
1. Legoe Bay
2. Guemes Island S.
3. Ebey's Landing
4. Twin Rivers
5. Dungeness Spit
6. South Beach
7. Deadman Bay
Sand
8. Eagle Cove
9. West Beach
10. North Beach
11. Kydaka Beach
12. Alexander's Beach
Mud-Gravel
13. Webb Camp
14. Beckett Point
Mud-Sand
15. Birch Bay
16 . Jamestown/
Port Williams
Mud
17. Westcott Bay
18. Dray ton Harbor
19. Padilla Bay
20. Fidalgo Bay
Exposed Rock
21. Pillar Point
22. Tongue Point
Protected Rock
23. Point Migley
24. Fidalgo Head
25. Cantilever Pier
26. Barnes Island
27. Point George
28. Allan Island
Cobble
29. Cherry Point
30. Shannon Point
31. Point Partridge
32. North Beach
33. Morse Creek
A. Neah Bay
B. Slip Point
C. Observatory Point
NEARSHORE
Exposed
34. Kydaka Beach
35. Twin Rivers
36. Morse Creek
37. Dungeness Spit
38. Jamestown/
Port Williams
39. Beckett Point
40. West Beach
41. Alexander's Beach
42. South Beach
43. Deadman Bay
44. Eagle Cove
45 . Burrows Island
Protected
46. Birch Bay
47. Cherry Point
48. Lummi Bay
49. Point Migley
50. Legoe Bay
51. Guemes Island E.
52. Padilla Bay
53. Guemes Island S.
54. Shannon Point
55. Point George
56. Westcott Bay
OFFSHORE PLANKTON
Stations 1-9
                                     190

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.,

                  INTERTIDAL / SUBTIDAL  BENTHOS
                  NEARSHORE FISH, AND
                  PLANKTON SAMPLING STATIONS

         Figure I-A.
Locations of  plankton-collection sites(l-9)  and intertidal/subtidal/nearshore sampling
sites for benthos imc! f ish(l-56) .

-------
                                                                                        I Boundary Boy
'•
       49°-
       50'-
       40'-
       48°
       30'
       20-
                 AIRCRAFT, FERRY AND
                 SMALL VESSEL SURVEY  TRANSECTS
                 USED IN MARINE BIRD  SURVEYS
Airplane-
Ferry -
Small Vessel	
        HI
       Figure I-B,
    Location of  marine bird survey  transects.   Note:  in some areas  where duplicate
    methods were used, only one is  shown for  clarity.
                                                                                                            census

-------
'.•
                 SHORE  CENSUS AREAS
                 USFD IN MARINE BIRD SURVEYS
               40             20'            124°
        Figure I-C.  Locations of marine  bird shore census  sites(darkened  areas).

-------
                                                                                            I Boundery Boy
           MAJOR  POINT CENSUS AREAS (Aerial),
           AERIAL TRANSECTS, BOAT TRANSECTS
           AND LAND OBSERVATION  SITES
           USED IN MARINE  MAMMAL SURVEYS
           F'oint Census (aerial) •
           Point Census ( land)
           Transect Data (aerial) i— -
           Transect Data (boat) i	
                                                       VANCOUVER
                                                         ISLAND
                                            WASHINGTON STATE
Figure
                  20'              124°             40'               2O'

I-D.   Locations  of  marine mammal survey  sites and transects.
                                                                                                                             20'

-------
                                 APPENDIX II


            DOMINANT SPECIES PER INTERTIDAL/SUBTIDAL HABITAT TYPE

            AND REPRESENTATIVE DATA FROM SPECIFIC SAMPLING SITES


     Mammals data are shown  as highest single counts made  during  a two-year
study period at selected sites.

     Birds data are  shown as mean numbers  and  biomass per  square kilometer
calculated seasonally over  a two-year study period for selected survey areas
for the 10 most  common  (by  percent  occurrence)  species.   If  fewer  than 10
species were  observed,   density  and  biomass  are  shown for  the  number of
species observed.

     Fish  data are  shown as present (X) or absent for most common species at
selected sites.

     Benthos data are  shown as mean wet weight  (in grams/m ) for plants; and
mean counts/m2  (above)  and mean wet weight (grams/m2)  (below)  for inverte-
brates.   Dominants  were  subjectively  selected  from  lists  of species  that
comprised at least 10% of the  total weight  or counts at each site.  Abbrevia-
tions  of   pre  (predator),   sus   (suspension  feeder),  her  (herbivore),  sea
(scavenger), dep  (deposit feeder) are included  for  those taxa whose feeding
habits are known.
                                     195

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Table II-A.  Dominant species of marine mammals

Rock/cobble
                                      Sucia               Patos    Tatoosh
                                      Island  Race Rocks  Island  Island
Harbor seal
  (Phoca vitulina)

Northern sea lion
  (Eumetopias jubatus)

California sea lion
  (Zalophus califo rnianus)
124
 32
135
212
           296
 X*
10
20
*present, but unquantifled.

Exposed unconsolidated
Protected unconsolidated
                                       Dungeness   Smith-Minor   Protection
                                         Spit        Islands       Island
Harbor seal
Northern sea lion
California sea lion
87
0
0
257
0
0
223
0
0
                                     Padilla Bay  Samish Bay  Dungeness Bay
Harbor seal
Northern sea lion
California sea lion
93
0
0
71
0
0
107
0
0
NOTE:  Numbers observed - highest single count.
                                    196

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Table II-B.   Dominant species of marine birds




Rock/cobble


Greater Scaup
Common Goldenaye
Bufflehead
Oldsquaw
Harlequin Duck
White-winged Scoter
Surf Scoter
Glaucous-winged Gull
Mew Gull
Bonaparte's Gull


Great Blue Heron
Harlequin Duck
White-winged Scoter
Surf Scoter
Sanderling
Glaucous-winged Gull
California Gull
Maw Gull
Bonaparte's Gull
Hearmann's Gull
Spring
No. /km
12
<1
2
6
3
27
1,090
30
19
89
Fall
No. /km
< 1
2
< 1
8
< 1
9
1
1
7
6
(n = 49)
2 g/km2
11
<1
<1
5
2
38
1,036
40
8
16
(n = 65)
2 g/km*
< 1
< 1
1
8
< 1
12
< 1
< 1
1
2


Great Blue Heron
Mallard
Harlequin Duck
White-winged Scoter
Surf Scoter
Killdeer
Glaucous-winged Gull
California Gull
Mew Gull
Bonaparte's Gull


Greater Scaup
Common Goldeneye
Bufflehead
Oldsquaw
Harlequin Duck
White-winged Scoter
Surf Scoter
Glaucous-winged Gull
Mew Gull
Bonaparte's Gull
Summer
No. /km
< 1
< 1
3
1
9
< 1
13
< 1
< 1
< 1
Winter
No. /km
10
3
8
2
1
1
25
9
2
< 1
(n = 16)
2 g/km2
< 1
< 1
2
1
9
0
17
< 1
< 1
< 1
(n = 54)
2 g/km2
9
2
3
2
< 1
1
24
11
1
< 1
NOTE:  Mean No./km2 and mean g/km2 for 10 most-frequently occurring species.
Continued
                                    197

-------
Table II-B.  (Contd.)


Exposed unconsolidated
Spring (n = 4)

Common Goldeneye
Bufflehead
White-winged Scoter
Surf Scoter
Bald Eagle
Glaucous-winged Gull
Mew Gull
Bonaparte's Gull


Great Blue Heron
White-winged Scoter
Surf Scoter
Bald Eagle
Glaucous-winged Gull
California Gull
Mew Gull
Bonaparte's Gull
Heermann's Gull
Common Tern
No . /km 2
3
5
2
6
< 1
15
< 1
20
Fall (n
No. /km2
<1
1
17
<1
103
10
68
44
27
50
g/km*
3
2
3
6
4
19
< 1
4.
= 10)
g/km2
<1
2
16
1
134
8
29
8
12
5

Bald Eagle
Killdeer
Glaucous-winged Gull
California Gull




Summer (n • 3)
No. /km2
< 1
< 1
44
< 1




fi/km2
4
< 1
58
< 1




Winter (n - 7)

Great Blue Heron
Common Goldeneye
Bufflehead
Oldsquaw
Harlequin Duck
White-winged Scoter
Surf Scoter
Glaucous-winged Gull
Mew Gull
Bonaparte's Gull
No . /km 2
1
< 1
16
2
8
<1
8
26
7
3
g/km2
3
<1
6
2
5
<1
8
34
3
<1
                  2              2
 NOTE:  Mean No./km  and mean g/km  for  10 most-frequently occurring species.


 Continued
                                     198

-------
Table II-B.  (Contd.)




Mixed coarse


Great Scaup
Common Goldeneye
Bufflehead
Oldsquaw
Harlequin Duck
White-winged Scoter
Surf Scoter
Black Scoter
Glaucous-winged Gull
Mew Gull


Great Blue Keron
Harlequin Duck
White-winged Scoter
Surf Scoter
Glaucous-winged Gull
Western Gull
California Gull
Mew Gull
Bonaparte's Gull
Heermann ' s Gull
Spring (n
No . /km2
2
2
15
< 1
< 1
2
13
2
58
5
Fall (n
No. /km2
< 1
< 1
3
10
56
< i_
48
14
21
13
= 49)
g/km2
2
2
6
< 1
< 1
3
13
2
75
2
= 81)
g/km2
2
< 1
11
10
72
< 1
37
6
4
6
Summer (n = 15)

Great Blue Heron
Greater Scaup
Harlequin Duck
White-winged Scoter
Surf Scoter
Bald Eagle
Killdeer
Glaucous-winged Gull
California Gull
Bonaparte's Gull
No . /km2
1
< 1
2
< 1
7
< 1
< 1
33
< 1
2
Winter (n

Greater Scaup
Common Goldeneye
Bufflehead
Oldsquaw
Harlequin Duck
White-winged Scoter
Surf Scoter
Black Scoter
Glaucous-winged Gull
Mew Gull
No. /km2
7
12
37
17
3
3
17
3
112
47
g/km2
3
< 1
1
1
6
< 1
0
43
< 1
< 1
= 87)
g/km
6
10
15
13
2
5
16
3
146
20
NOTE:  Mean No./krf and mean g/knf  for 10 inost-frequently occurring species,




Continued






                                     199

-------
Table II-B.  (Contd.)




Protected unconsolidated (mud-sand)


Black Brant
American Wigeon
Greater Scaup
Common Goldeneye
Bufflehead
White-winged Scoter
Surf Scoter
Black Bellied Plover
Glaucous-winged Gull
Mew Gull


Great Blue Heron
American Wigeon
White-winged Scoter
Surf Scoter
Killdeer
Glaucous-winged Gull
California Gull
Mew Gull
Bonaparte's Gull
Heermann's Gull
Spring (n
No. /km2
276
32
13
11
58
15
22
4
142
26
Fall (n
No. /km2
4
752
11
29
< 1
109
84
7
19
2
= 14)
g/km2
345
25
12
9
23
21
21
1
184
11
= 20)
g/km2
12
602
15
27
< 1
141
65
3
3
1
Summer (n = 2)

Great Blue Heron
Killdeer
Black Turnstone
Glaucous-winged Gull






No. /km2
4
1
22
354






Winter (n

Black Brant
American Wigeon
Greater Scaup
Common Goldeneye
Bufflehead
Harlequin Duck
White-winged Scoter
Surf Scoter
Glaucous-winged Gull
Mew Gull
No. /km2
122
411
43
23
244
1
15
76
37
22
g/km2
13
< 1
3
461






- 27)
g/km2
153
329
38
20
98
< 1
20
73
48
9
NOTE:  Mean No./km  and mean g/km2 for 10 most-frequently occurring species,




Continued





                                    200

-------
Table II-B.  (Contd.)




Protected unconsolidated  (mud)


Great Blue Heron
Black Brant
Greater Scaup
Common Goldeneye
Bufflehead
Oldsquaw
White-winged Scoter
Surf Scoter
Glaucous-winged Gull
Mew Gull


Great Blue Heron
Greater Scaup
White-winged Scoter
Surf Scoter
Kllldeer
Glaucous-winged Gull
California Gull
Ring-billed Gull
Mew Gull
Bonaparta's Gull
Spring (n
No. /kin 2
2
147
65
2
23
< 1
6
74
22
7
Fall (n
No . /km2
5
47
10
19
< 1
20
3
5
7
30
= 43)
g/km2
5
184
59
1
9
< 1
9
70
29
3
= 72)
g/km2
15
43
14
18
< 1
26
2
3
3
5
Summer (n

Great Blue Heron
Mallard
Greater Scaup
White-winged Scoter
Surf Scoter
Bald Eagle
Killdeer
Glaucous-winged Gull
Ring-billed Gull
Bonaparte's Gull
No . /km2
7
< 1
3
1
2
< 1
< 1
42
< 1
9
Winter (n

Common Pintail
American Wigeon
Greater Scaup
Common Goldeneye
Bufflehead
White-winged Scoter
Surf Scoter
Dunlin
Glaucous-winged Gull
Mew Gull
No . /km2
49
65
68
8
60
10
20
93
15
8
" 17)
g/km2
20
< 1
3
2
2
< 1
< 1
54
< 1
2
= 82)
g/km2
47
52
61
7
24
14
19
6
19
3
NOTE:  Mean No./km2 and mean g/km2 for  10 most-frequently occurring species,




Continued
                                    201

-------
Table II-B.   (Contd.)



Protected unconsolidated (mud-gravel)
Spring (n

Great Blue Heron
Black Brant
Greater Scaup
Common Goldeneye
Bufflehead
White-winged Scoter
Surf Scoter
Black Brant
Glaucous-winged Gull
Mew Gull


Great Blue Heron
American Wigeon
White-winged Scoter
Surf Scoter
Western Sandpiper
Glaucous-winged Gull
California Gull
Mew Gull
Bonaparte's Gull
Heermann's Gull
No./km2
< 1
12
34
< 1
21
43
122
2
37
1
Fall (n
No. /km2
< 1
1
13
9
< 1
29
4
< 1
8
< 1
- 11)
g/km2
1
15
30
< 1
9
60
116
2
48
< 1
= 9)
fi/km2
3
1
18
9
< 1
33
3
< 1
1
< 1
Summer (n = 2)

Great Blue Heron
Harlequin Duck
White-winged Scoter
Surf Scoter
Glaucous-winged Gull
Bonaparte's Gull




No. /km2
2
< 1
< 1
< 1
14
< 1




Winter (n

Common Pintail
American Wigeon
Greater Scaup
Common Goldeneye
Bufflehead
Oldsquaw
White-winged Scoter
Surf Scoter
Glaucous-winged Gull
Mew Gull
No. /km2
1
12
172
58
101
63
53
141
32
14
R/km2
4
< 1
< 1
< 1
19
< 1




- 12)
g/km2
2
10
154
50
40
49
73
134
42
6
 NOTE:  Mean No./km2 and mean g/km2  for 10 most-frequently occurring species,
                                      202

-------
Table II-C.  Dominant species of fish

Exposed sand
                                             Eagle   Alexander's  West   Kydaka
                                              Cove     Beach      Beach  Beach
Microgadus proximus (Pacific tomcod-juv.) X
Amphisticus rhodoterus (redtail surfperch)
Cymatogaster aggregata (shiner perch) X
Blepsias cirrhosus (silverspotted sculpin)
Leptocottus armatus (Pacific staghorn
sculpin) X
Agonus acipenserinus (sturgeon poacher)
Citharichthys stigmaeus (speckled sanddab)
Lepidopsetta bilineata (rock sole)
Platichthys stellatus (starry flounder) X
Parophrys vetulus (English sole-juv.) X
Psettichthys melanostictus (sand sole) X

X

X
X

X
X


X
X
X
X
X
X


X X
X
X
X
X
X X
X
NOTE:  Sites at which dominant  species were present,

Continued
                                     203

-------
Table II-C.  (Contd.)

Exposed mixed coarse
                           Cherry Legoe Guemes Deadman South Dungeness  Twin
                           Point   Bay  Island   Bay   Beach    Spit     Rivers
Microgadus proximus
   (Pacific tomcod-juv.)             XX            XX
Theragra chalcogramma
   (walleye poliock-juv.)                    X            X
Aulorhynchus flavidus
   (tubesnout)                       X             X
Syngnathus leptonhynehus
   (bay pipefish)                    X             X
Amphisticus rhodoterus
   (redtail surfperch)                                                     x
Cymatogaster aggregata
   (shiner perch)              X             X      X     X        X
Embiotoca lateralis
   (striped seaperch)                        X                             X
Rhacochilus^ vacca
   (pile perch)                      X      X
Apodichthys flavidus
   (penpoint gunnel)           XXX                      X
Pholis laeta
   (crescent gunnel)                  XXX                      X
_P.  ornata
   (saddleback  gunnel)                X                                    X
Hexagrammos stelleri
   (whitespotted greenling)   X      X      X      X
Sebastes  caurinus
   (copper rockfish-juv.)                          X
Artedius  fenestralis
   (padded sculpin)           X      X      X      X      X               X
_A.  lateralis
   (smoothhead  sculpin)                             X
Ascelichthys  rhodorus
   (rosylip sculpin)                                       X
Blepsias  cirrhosus
   (silverspotted sculpin)    XXX                      X
 Clinocottus  acuticeps
   (sharpnose  sculpin)                XX             X
 Enophrys  bison
   (buffalo sculpin)           X      X      X      X      X               X
 Leptocottus  armatus
   (Pacific staghorn
   sculpin)                   X      X      X      X      X       X       X

 Continued
                                       204

-------
Table II-C.  (Contd.)
Exposed mixed coarse
                           Cherry Legoe Guemes Deadman South Dungeness  Twin
                           Point   Bay  Island   Bay   Beach   Spit    Rivers
                                                         X

                                                         X
                                                         X
Myoxocephalus polyacan-
  thocephalus (great
  sculpin)                   X'     X      XX
Oligocottus maculosus
  (tidepool sculpin)         XX             X
Scorpaenichthys marmoratus
  (cabezon-juv.)             XXX
Synchirus gilli
  (manacled sculpin)                              X
Euinicrotreinis orbis
  (spiny lumpsucker)                              X
Liparis callyodon
  (spotted snailfish)        X                   X
_L. florae
  (tidepool snailfish)                     X
_L_. rutteri
  (ringtail snailfish)                            X
Agonus acipenserinus
  (sturgeon poacher)                X      X
Pallasina barbata
  (tubenose poacher)         X     X      X      X
Citharichthys sordidus
  (Pacific sanddab)          X
Lepidopsetta bilineata
  (rock sole)                       X
Parophrys vetulus
  (English sole-juv.)                      X      X
Platichthys stellatus
  (starry flounder)                 X      X
Psettichthys malanostictus
  (sand sole)
                                                         X

                                                         X
                                                          X

                                                          X

                                                          X
X

X

X
                                                                         X
X

X

X
 NOTE:  Sites at which dominant species were present.
                                      205

-------
Table II-C.  (Contd.)




Exposed rock/cobble
Neah Slip Observatory Morse Twin North
Bay Point Point Creek Rivers Beach
Anoplarchus purpurescens
(high cockscomb) X X
Clinoccottus embryum
(calico sculpin) X
C. globiceps
(mosshead sculpin) X
Oligocottus maculosus
(tidepool sculpin) X X
Gobiesox maeandricus
(northern clingfish) X X
Xiphister atropurpureus
(black prickleback) X
NOTE: Sites at which dominant species were
Rocky kelp bed(subtidal)
X X
X
X
X XXX
X XXX
present .
Barnes Allan Point
Island Island George
Embiotoca lateralis (striped seaperch)
Sebastes caurinus (copper rockfish)
S. emphaeus (Puget Sound rockfish)
S. flavidus (yellowtail rockfish)
S. maliger (quillback rockfish)
S. melanops (black rockfish)
Hexagraromos decagrammus (kelp greenling)
Ophiodon elongatus (lingcod)
Artedius harringtoni (scalyhead sculpin)
Hemilepidotus hemilepidotus (red Irish lord)
Jordania zonope (longfin sculpin)
Coryphopterus nicholsi (blackeye goby)

X X
XXX
X
X
X X
X X
XXX
X X
X
X
XXX
X X
NOTE:  Sites at which dominant species were present.
                                    206

-------
Table  II-C.   (Contd.)

Protected  unconslidated (mud/gravel)
                             Birch  Fidalgo  Westcott  Beckett   Jamestown/Port
                              Bay   Island     Bay      Point	Williams
'Microgadus proxiinus
   (Pacific tomcod-juv.)
 Aulorhytichus flavidus
   (tube-snout)
 Syngnathus leptonhynehus
   (bay pipefish)
 Cymatogaster aggregata
   (shiner perch)
 Embiotoca lateralis
   (striped seaperch)
 Rhacochilus vacca
   (pile perch)
 Apodichthys flavidus
   (penpoint gunnel)
 Lumpenus sagitta
   (snake prickleback)
 Pholis laeta
   (crescent gunnel)
 Pholis ornata
   (saddleback gunnel)
 Hexagraminos stelleri
   (whitespotted greenling)
 Artedius  fenestralis
   (padded sculpin)
 Blepsias  cirrhosus
   (silvsrspotted  sculpin)
 Chitonotis  pugetensis
   (roughback  sculpin)
 Clinocottus acuticeps
   (sharpnose  sculpin)
 Enorphrys bison
   (buffalo sculpin)
 Leptccottus armatus
    (Pacific staghorn
   sculpin)
 Myoxocephalus polyacan-
   thocephalus
    (great sculpin)
  Oligocottus^ maculosus
    (tidepool sculpin)
  Scorpaenichthys marmoratus
    (cabeson)

  Continued
X

X

X

X
X

X
 X

 X


 X


 X

 X

 X
X

X
X

X

X
                 X
X

X



X

X



X

X


X
X



X

X
 X
 X

 X
X

X



X

X
                           X
                           X
            X

            X
                               X
                                       207

-------
Table II-D.  (Contd.)  a. Intertidal rock












Nemertea spp. pre.

Nematoda spp. dep.

Oligochaeta dep.

Polychaeta
Arenicolidae spp. dep.
Cirratulidae
Cirratulus sp. dep.

Lumbrineridae
Lumbrineris spp . dep .

Nereidae
Nereis spp. her.

Sabellidae- spp . sus .

Serpulidae
Spirorbia sp. sus.

Spionidae spp. dep.

Syllidae

Terebellidae spp. dep.



4J
C
.^4
o
IV
 PM
O Q>
00 -} >>
iH i-l 
-------
Table II-D.  (Contd.)  a. Intertidal rock

Mollusca - Amphineura
Cyanoplax dentiens her.
Katherina tunicata her.
Mopalia spp. her.
Tonicella lineata her.
Mollusca Gastropoda
Collisella digitalis her.
Collisella pelta her.
Collisella strigitella her.
Lacuna variegata her.
Littorina scutulata her.
Littorina sitkana her.
Notoacmea persona her.
Notoacmea scutum her.
Nucalla spp . pre .
Searlesia dira

Tongue Point
24.2
2.5
4.4
23.4
6.7
4.9
100.8
19.0
25.0
19.3
49.2
4.1
18.3
3.3
1159.2
6.7
6.7
1.2
7.5
3.8
Pillar Point
0.5
0.2
6.3
98.3
8.3
0.2
40.0
13.7
6.7
3.3
70.0
0.2
363.3
6.7
6.7
6.7
"O
«
0)
BC
o
00
iH
at
T3
•H
ft,
22.7
129.2
10.0
94.7
0.8
1.0
0.7
2.1
20.7
4.4
54.0
10.2
1.3
0.2
1132.3
5.6
79.0
8.7
46.0
4.5
24.7
7.5
20.0
11.5
12.4
7.3
17.1
20.9
Cantilever Pier
1.9
2.1
0.4
1.1
51.1
278.1
213.9
81.2
829.3
178.0
2.7
12.0
4.8
4->
a
•H
O
04
^
Q>
rH
60
•rl
S
12.0
0.7
0.7
2.8
0.2
90.4
11.8
109.7
5.3
26.4
0.5
84.2
1.3
1304.7
43.0
135.0
6.0
108.3
3.3
6.3
0.7
1.2
0.2
0.2
0.1
Continued
                                      211

-------
Table II-D.  (Contd.)  a. Intertidal rock


Mollusca - Bivalvia
Hiatella spp. sus.
Musculus pygmaeus sus.
Mytilus edulis sus.

Mytilus spp. sus.

Crustacea - Tanaidacea
Anatanais normani dep.

Leptochelia dubia dep.

Pancolus californiensis
dep.
Crustacea Cirripedia
Balanus cariosus sus.

Balanus crenatus /Balanus
glandula sus.

Balanus spp . sus .

Cthamalus dalli sus.

Crustacea - Amphipods
Caprellidea sp.


Tongue Point

11.7
10225.8
80.8


497.5
6.7

669.2
6.7

48.3
66.9


2633.0
161.0
1180.0
24.8




Pillar Point

13.3
40.8


13.3
3.3
720.0
0.3



590.0
23.3
140.5
284.8
2486.7
63.3

100.0
.6.7

•o
CO
0)
o
00
i-H
RJ
•a
•H
fe


46.7
0.9

1.9

1.5

1710.8
1357.2
176.2
17.4
32.9
1.1
30.5
0.3



M
a>
i
^i
p4 4J
c
H -H
a) o
> Py
.
>H OJ
4J rH
C 00
Cfl -H
u S

0.2
137.0 1911.8
157.5




0.3


230.2 56.0
73.3
505.0 4081.8
451.5
612.6 3603.1
154.8
522.3 2041.9
63.0



Continued
                                     212

-------
Table II-D.  (Contd.)  a. Intertidal rock

4J
c
i-l
O
PL,
Q)
a
60
C
O
H
Crustacea - Amphipods (Contd.)
Gananaridea spp. dep./her. 2760.0
(Ampithoe sp . )
(Hyale sp . )
(Parallorchestes ochotensis)
(jPontogeneia sp . )
Crustacea - Isopoda
Dynamenella sheareri sea.
Exosphaeroma spp. sea.
Gnorimosphaeroma oregonensis
sea.
Idotea spp. sea.
Limnoria algarum her.
Munna chromatocephala dep.
Crustacea - Decapoda
Cancer oregonensis pre.
Pagurus spp. dep.
Pugattia gracilis her .
22.8
991.7
9.2
10.0
1.5
28.3
3.3
3.3
8.3
5.8
1.0
140.0
5.0
Pillar Point
226.7
7.3
183.3
3.3
87.2
7.3
263.3
3.3
0.8
0.5
3.3
4.3
K
*
0)
r-\
00
•H
s
350.6
4.0
52.7
0.6
117.6
1.3
3.5
0.1
17.2
1.7
51.5
2.3
4.7
0.7
 Continued
                                     213

-------
Table II-D.  (Contd.)  a. Intertidal rock












Insecta
Diptera larvae spp.
dep.
Echinodermata - Asteroidea
Leptasterias hexactis pre.

Echinodermata - Holothuroidea
Cucumaria pseudocurata sus.

4-J
ti
Tt
O
O-t

9)
a
00
g
O
H

709.2
10.0

10.0
5.8

1503.3
42.5
4J
e
•H
O
CL.

M
QJ
r^
.-1
•H
04

100.0
6.7







03
0)


O
00

05
•O

h

55.5
0.1

5.4
1.9



0)

^
0)

V
iH
•H
4J
S
0)
CJ>

144.3


3.1




4J
c
•H
O
CU

^.^
Q|
rH
HO
_-i
2

18.8
0.7

15.0
2.9



Continued
                                    2H

-------
Table II-D.   (Contd.)  b. Intertidal cobble
^ X
0
Platyhelminthes
Turbellaria pre. 157.5
Partridge Point
7.9
.5.3
4.6
19.4
241.9
11.3
39.9
78.1
31.8
1.7
8.0
50.9
0.1
43.4
34.0
23.7
Shannon Point
157.2
20.3
9.4
173.6
194.2
305.4
45.8
10.6
97.7
1.2
0.3
444.5
54.4
5.3
3.9
13.0
10.3
Cherry Point
280.3
42.7
17.9
472.6
.3.6
13.4
123.7
1.3
14.5
2.9
4.5
0.6
20.4
1.1
4.9
50.2
7.5
n.i
 Continued






                                       215

-------
Table II-D.  (Contd.)  b. Intertidal  cobble


Nemertea spp. pre.
Nematoda spp. dep.
Oligochaeta spp. dep.
Polychaeta
Arenicolidae spp. sus./dep.
Capitellidae
Capitella capitata dep .
Mediomastus sp. dep.

Notomastus tenuis dep.

Dorvilleidae
Protodorvillea gracilis
pre.
Glyceridae
Hemipodus borealis pre.

Goniadidae
Glycinde picta pre.
Lumbrineridae
Lumbrineris sp. dep.

•u
a
•r^
o
^ J3 PM
01 O
oj ta oj
H 0) W>
o « *o
•H
(0 *J 4-1
H M H
O O «
218.8 129.7
5.6 1.3
126.7 485.1
4.0 0.3
6.3 180.7 1797.6
0.7 4.7 0.4

71.6
1.8

682.2 19.9
4.2 0.2
7.6
9.3
0.6

739.0
0.2

40.0
0.7

0.3

57.0
8.9
1 1
Shannon Poini
29.5
1.2
8.2
0.1
195.4
1.5



4.4
7.4
114.2
6.2



17.4
1.9

22.6
0.7

32.1
3.2

4J
a
0
a,
n
0)
80.1
1.2
31.5
0.1
756.1
1.5

0.1

4.5
36.4
0.1
139.4
4.3

0.2

32.7
1.8

29.2
0.3

9.0
1.4
 Continued
                                      216

-------
Table II-D.  (Contd.)  b. Intertidal cobble


^
0)
0)
^4
o

0)
to
^|
o

Polychaeta (Contd.)
Nereidae
Nereis sp. her. 143.8
14.0
Platynereis bicanaliculata
her.
Onuphidae
Onuphis spp. sea.

Opheliidae
Armandia brevis dep. 30.4
1.6
Sabellidae spp. sus. 2145.3
18.0
Spionidae
Malacoceros sp. dep. 521.7
2.3
Polydora spp . dep .

Syllidae pre.

Terebellidae spp. dep. /sus.

Thelepus crispus dep .

Mollusca - Amphineura
Amphineura spp. her.

Cyanoplax dentiens her.



-c
u
cfl

00

•H
M
4-1
(4
td
Cu


26.3
6.7
117.7
1.7

552.3
4.7

6.1




7.4

1.4

412.9
0.7
107.4
5.2
300.8
85.0

5.4
5.7
2.3


c
•H
0


a
o
c
c

f^
CO


26.7
4.3
1.9
.1

44.2
0.9

16.1
0.3
3.2
0.3

8.6

6.5
0.1
22.6
1.4
17.5
12.0
67.9
70.3

0.4
0.2
4.7
0.6

4J
a
•H
o
cu

s^
Vi

0)

0


36.1
16.3
3.4
.1




79.8
1.0
0.8
0.1

0.6

20.2
0.3
10.6

0.6
0.2



0.9
0.2
2.1
0.1
 Continued





                                      217

-------
Table II-D.  (Contd.)  b. Intertidal cobble

Mollusca - Gastropoda
Collisella pelta her.
Collisella spp. her.
Lacuna variegata her.
Littorina scutulata her.
Littorina sitkana her.
Notoacmaea sp.
Notoacmea persona her.
Notoacmea scutum her.
Nucella lamellosa pre.
Nucella spp. pre.
Mollusca - Bivalvia
Mysella tumida sus.
Mytilus edulis sus.
Protothaca staminea sus.
Saxidomus giganteus sus.

.w

-------
Table II-D.   (Contd.)  b. Intertidal cobble

Mollusca - Bivalvia (Contd.)
Tresus capax sus.
Crustacea - Tanaidacea
Leptochelia dubia dep.
Crustacea - Cirripedia
Balanus cariosus sus.
Balanus crenatus /Balanus
glandula sus.
Balanus spp. sus.
Chthamalus dalli sus.
Crustacea - Amphipoda
Gammaridea spp. dep.
(Ampithoe sp. her.,
Corophium spp. sus. /dep.,
Hyale sp . dep . , Paramoera
mohri dep.)
Crustacea - Isopoda
Exosphaeroma spp. sea.
Gnorimosphaeroma
oregonensis sea.
Idotea spp. sea.

Morse Creek
5.1
12.9
9.6
2.9
984.8
110.3
1589.2
44.0
2502.2
33.4
37.7
0.7
17.3
4.9
J2
u
cd
a)
PQ
,e
4-1
VJ
o
!5
3.3
3.3
106.7
6.0
42.0
4.7
107.8
1.3
311.0
7.7
126.7
0.7
395.3
0.2
Partridge Point
1.1
33.2
1.4
990.9
27.6
264.6
3.6
3505.5
17.4
195.1
1.0
135.7
1.3
440.9
14.9
Shannon Point
0.4
0.1
203.0
0.3
91.9
293.1
162.7
10.7
1.8
0.3
157.0
2.7
180.6
3.2
42.3
0.8
74.7
2.7
61.4
9.9
4J
c
•rt
0
Pt
>>
t-t
!-i

-------
Table II-D.  (Contd.)  b. intertidal cobble














Crustacea - Decapoda
Hemigrapsus nudus sea.

Hemigrapsus oregonensis
sea.
Hemigrapsus spp. sea.

Pagurus spp. dep.

Pinnixa sp. pre.

4-1
C
-,1
•n
0
^ J= 0,
a) o
01 co o
u pa -o
•H
Oi J3 i-i
CO 4J 4J
^ H M
O O «
S !S . PH

3.3 35.0
7.7 99.7
3.7
27.8
39.4
33.2
38.7 42.6
6.1 . 3.4
1.1



c
•H
O
PL,

C
O
C
C
tfl

w

96.8
54.5
55.6
14.9
42.1
5.0
101.1
8.6
27.9
0.9


w
rt
-H
O


^"»
M
t.
0)

0

202.6
77.6
80.9
14.8
11.3
0.9
98.3
2.2
7.4
0.3
Insecta

  Diptera larvae spp.  dep.


Echinodermata

  Leptasterias hexactis pre.
1988.0
   3.8
6.7
3.3
                                                       4.4
                                                      20.5
                                                       7.2
1.1
1.6
2.3
13.1
42.9
30.4
Continued
                                     220

-------
Table II-D.  (Contd.)  c. Subtidal rock and  cobble

Chlorophyta
Enteromorpha linza
Monostroma spp.
Phaeophyta
Alaria spp .
Costaria costata
Desmarestia spp.
Egregia menziesii
Laminaria sp . /
Laminaria
saccharina
Nereocystis luet-
keana
Pterygophora
californica
Rhodophyta
Botryoglossum
farlowianum
Calliarthron
tuberculosum
Callophyllus
flabellulata
Gigartina spp.
jtollenbergia sp.
Hymenena sp.
Iridaea spp.
Laurencia
spectabilis
*J TJ 0)
C a so ^4 ,£
•rl tO K >
H
>^ H
0) 
-------
Table II-D.  (Contd.)  c. Subtidal rock and cobble
4J
fi
i-l
O
FM
0)
00
B
0
H
Rhodophyta (Contd.)
Microcladia
borealis
Odonthalia
floccosa
Odonthalia
washingtoniensis
Opuntiella
californica
Plocamium tenue
P. coccineum
Polyneura
latissima
Pterosiphonia sp.
Rhodomella larix
Rhodoptilum
plumps'™
Angiosperms
Phyllospadix
scouleri
Zostera marina
Nematoda spp. dep.
Oligochaeta spp. dep.
Archiannelida
Polygordius sp.
Fidalgo Head
Point George
Morse Creek
21.2
0.3
3.2
5.6
0.3
49.0
1.8
0.8
3.7
0.1
0.8
4.2
4J
C to
•H C
0 i-(
X . PLi T3
U C
cd tt) «J
0) 00 J
PQ -O
•H CO
J= H
*J 4J f^,
MM 0
OR) J3
Z FL, tq
.03
0.6 0.6
0.1 0.1
3.5 .001 .003
0.1 0.1
0.1 .05
.004 0.2
0.1
0.002
0.8 .002
0.3
295.0 278.5 58.5
1.5 0.2 Q.I
712.5 1014.1 187.5
<1.5 0.3
6.7 4.5
4J
C
•H
o
P-.
>v
M
M
(U
U
0.5
3.8
39.7
8.3
 Continued
                                     222

-------
Table II-D.  (Contd.)  c. Subtidal rock and cobble


•M *O
d nj
i-l  X JS PL,
M 
-------
Table II-D.  (Contd.)  c. Subtidal rock and  cobble


4-1 »O
C oj
•H 0)
0 SC
PU
O
4) 60
00 A
C T»
0 -H
H b
Polychaeta (Contd.)
Onuphidae
Onuphis sp. sea.

Oweniidae
Owenia fusiformis 1.7
dep.
Phyllodocidae
Hesionura coineaui
pre.
Serpulidae
Spirorbis spp. 32.6 15.8
sus . 0.4
Sigalionidae
Pholoe minuta pre. 10.2

Spionidae
Polydora hamata/ 1.0
P. pygidialis
dep.
Prionospio 108.3
steenstrupi dep. 0.1
Spio filicornis dep.

Spiophanes bombyx 0.8
dep.
Syllidae
Typosyllis sp. pre.. 1.2

a
•H
 4J
•H h M H
o o o td
PLI S Z Oi


147.5 382.7
1.5 2.4

3.0


100.0
0.1




12.0


347.5 0.3
1.0

106.0 80.0 13.6
2.0 1.5 0.1
180.0 85.8
1.5 0.5
37.3
0.2

416.0 291.9
2.0 0.5
bO
C
•H
*O
a
cjj
H"4

CO
^^
a>
«


12.4
0.1

92.6
1.9

5.2


0.8
1.5

13.2





67.1
0.8
55.1
0.3
124.2
0.7

45.8
0.1


4-1
C
•rH
o
(X,

£
h

-------
Table II-D.  (Contd.)  c. Subtidal rock and cobble


Terebellidae
Thelepus crispus
dep.
Mollusca - Amphineura
Lepidozona spp.
her.
Tonicella lineata
her.
Molusca - Gastropoda
Acmaea mitra her.

Alvinia sp. sea./
det.
Amphissa colum-
biana sea. /det.
Calliostoma
ligatum her./
pre.
Ceratostoma
foliatum pre.
Fusitriton
oregonensis
pra.
Granulina
margaritula
Haliotis
kamschatkana her.
Lacuna variegata
her.

•U
•H
O
p-l

o o
4J 0)
C to
•H M
O O
PM S






26.7
23.5

3.5
5.2

9.8 250.0
7.6 16.0
14.2
12.6

0.2
9.1


0.3
5.5
0.1
4J
fi
•rH
o
JS P-.
(0 0)
% U
W 6




3.6
0.3
0.2 0.7
0.4 0.5

0.1
0.4
20.7 340.8
1.0
14.3
0.6
0.2




304.7 746.0
2.7 2.8
Continued
                                     225

-------
Table II-D.  (Contd.)  c. Subtidal rock and cobble

Mollusca - Gastropoda
(Contd.)
Lirularia
lirulata her.
Margaritas
pupillus her.
Oceanebra
lurida pre.
Trichotropis
cancellata sus.
Mollusca - Bivalvia
Astarte
alaskensis sus.
Axinopsida sp. sus.
Clinocardium spp.
sus.
Crenella decussata
sus.
Glycymeris
subobsoleta sus.
Macoma spp. sus./
dep .
Modiolus rectus
sus .
Mysella tumida
dep . /sus .
Protothaca
staminea sus.
Psephidia lordi
sus.
Continued
w -a 0 Hi pj 03
c -a -H vi
O -H O O
H fn Pn S
79.6 4.5
0.6 0.2
114.00 21.3 30.2
10.00 1.1 9.5
26.6 0.6
3.8 5.5
2.5 10.2
0.3 9.3
4.2
5.0
26.5
6.0
2.0
65.8 86.0
2.3
2.5
0.7
8.3 396.0
2.0
12.8
59.5
North Beach
60.0
0.5
702.5
0.5
330.5
1.5
5.0
1.0
50.0
0.5
75.5
0.5
Partridge Point
57.6
0.8
59.4
1.1
26.4
5.8
0.5
0.1
3.3
1.1
683.1
7.9
8.5
0.6
3.6
1.3
44.0
0.1
1.5
0.3
124.7
1.2
Ebey's Landing
14.6
0.2
91.3
2.0
1.0
0.1
4.4
18.4
65.5
0.2
32.7
3.3
5.2
40.5
50.4
0.1
1.9
3.7
273.9
1.3
4J
C
«H
0
fX,
>.
M
M
0)
J3
O
7.5
0.2
2.2
0.1
210.0
2.0
45.0
141.1
50.8
25.0
1.0
684.2
2.8
21.7
1.0
1009.2
11.6
                                     226

-------
Table II-D.  (Contd.)  c. Subtidal rock and  cobble













Mollusca - Bivalvia
(Contd.)
Saxidomus
giganteus sus.
Crustacea - Tanaidacea
Leptochelia spp.
dep.
Crustacea - Amphipoda


4-J
e
•H
0
P-.

(U
3
00
C
o
H








Gammaridae spp. 4734.0
dep.
(Melita sp. dep.)
Crustacea - Isopoda
Exosphaeroma spp.
sea.
laniropsis spp.
dep.
Crustacea - Decapoda
Cancer
oregonensls
pre.
Heptacarpus spp.
pre.
Pagurus spp. dep.

Pinnixa
occidentalis
pre.
Pugettia spp . her .

7.0




192.2
0.2

14.0
9.2



214. &
7.8



482.0
19.2


-U
cd
0)
EC

0
00
rH
CO
•o
•rl
fa


5.0
164.1




119.7
1.0







12.2
1.1

26.7
0.4
7.2
0.3



7.2
14.0


0 X J3
H .
1-1
^
0)
6





111.7
0.1

99.7
0.3


0.3




3.3
0.2

1.0

19.7
0.7
168.5
0.5



Continued
                                      227

-------
          Table  II-D.   (Contd.)   d.  Intertidal exposed unconsolidated
ro
ro
CO














Platyhelminthes
Turbellaria spp. pre.

Nemertea spp. pre.

Oligochaeta spp. dep.

Polychaeta
Arenicolidae
Abarenicola claparedil
sus./dep.
Capitellidae
Capitella capitata
dep.
Mediomastus sp. dep.
*J 60
•H a
(X -H
CO W *O
M C
cu to (d
> co »4
•H >

3 £3 _O
HP w

42.7

102.0
0.1
20.0 1.7 86.4
1.3 0.5





56.0 4.6
0.7 0.3



fi

jj
o
en

CO
Q)
I
3
3
O



3.1

2.2
0.1





5.7

0.1


m
&*t
cd
(Q

0
3
0
•0


Q

2128.0

246.0

276.0






2.9

1.7


^r*
U
cd
>•> 0)
Qj pQ
P4
cd
0) ^«J
o cd
00 T3
4) >-,
*1 14

57.8
0.5
8.2
0.5
18.0 8.0
0,4 0.7





0.8





r*
U 43
-l CO
O 0)
a s

2.7

4.0 52.2
0.5
5.0 29.3
0.5


8.0
0.7

0.2

0.1




Q>

O


0)
tH
00
cd


8.0

10.0

12.0



6.4





          Continued

-------
         Table II-D.   (Contd.)   d.  Intertldal exposed unconsolidated
ro
ro
•H
P.
CD C/3
^
 CD
•H 0)
f£ C
cu
£ bO
•rl C
Polychaeta (Contd.)
Opheliidae
Armandia brevis dep.
Orbiniidae
Scoloplos sp. dep.
Paraonidae
Paranella platybranchia
dep.
Spionidae
Malacoceros sp. dep. 220.0
0.7
Scolelepis sp. dep.
Syllidae
Syllis sp. pre.
Ebey's Landing
Guemes South
3.4 5.9
0.1
0.4
1.1 0.3
0.3
CO CO 0 ,C i 0) cO O >
CO pq 0) (0 O
c CQ PQ « "
§ct) PP
0) Al rC <"
rQ 0 CO *-" W H
(fl CO T3 H CO W)
(U  O 
-------
         Table  II-D.   (Contd.)   d.  Intertidal exposed unconsolidated
ro
CO
o












Mollusca - Gastropoda
Lacuna variegata her.

Crustacea - Mysidacea
Archaeomysis grebnitzkii
dep .
Crustacea - Amphipoda
Gammaridea spp . dep .

(Accedomoera vagor dep . ,
Anisogammarus puget ten-
sis her., Eohaustorius
spp . dep . , Paramoera
mohri dep . , Paraphoxus
spp. dep.)
4-1 00
•f-4 r*
Tl p
M  tfl 1-4 C/5
•H  S -03 CU
Ho W U p

38.0 16.1
0.2 0.2




354.7 161.7 13118.9 49.2 8838.0
2.0 1.5 81.1 0.6







jg
u
cd
>-, 0)

pQ
cd
OJ ^d
o cd
t>0 X)

iJ W

8.2
0.8

23.0
0.8

1723.3 41.3
12.6 1.5








fi
0 J3 0>
cd o >

-------
Table II-D. ( Contd.)  e. Subtidal exposed unconsolidated
	Dungeness Spit   Guemes South   West Beach
Chlorophyta
  Ulva spp.                                             1.2
Rhodophyta
  Gracilariopsis sjoestedtii                            0.6
  Neogardhiella baileyi                                 0.6
Nemertea spp. pre.                                    62.5           21.7
                                                        1.3            0.2
Polychaeta
Capitellidae
  Mediomastus sp. dep.               915.0            139.2           33.8
                                        1.0              0.7            0.1
Dorvilleidae
  Onuphis sp. sea.                                                   47.3
                                                                     11.8
  Protodorvillea gracilis pre.       228.0
                                        1.0
Hesionidae
  Micropodarke dubia dep.            110.0            19.2            5.3
                                        1.0              0.1
Orbiniidae
  Scoloplos pugettensis dep.                                         102.7
                                                                      3.3
Spionidae
  Prionospio steenstrupi dep.          73.0              7.5            2.0
                                        1.0              0.1
Syllidae
  Exogone spp. pre.                  254.0            32.5            1.5
                                        1.0              0.1
Molluscs - Bivalvia
  Mysella tumida sus.                  50.0            56.7           160.7
                                        2.0              0.3            0.5
  Protothaca staminea                                 17.5
                                                      280.5
Continued
                                      231

-------
Table II-D. ( Contd.)  e. Subtidal exposed unconsolidated

Molluscs - Bivalvia (Contd.)
Psephidia lord! sus.
Saxidomus giganteus sus.
Molluscs - Gastropoda
Natica clausa pre.
Nucella lamellosa pre.
Crustacea - Tanaeidacea
Leptochelia sp. dep.
Crustacea - Cirripedia
Balanus glandula sus.
Crustacea - Amphipoda
Gammaridea spp. dep.
Echinodermata
Dendraster excentricus dep.

Dungeness Spit Guemes South

25.0
2.0
5.0
172.2
0.8
3.7
2.5
1.8
123.0 93.3
2.0 0.1

323.7
9.0
470.0 467.3
2.0 5.7


West Beach

1574.8
12.7

0.2
0.2
155.3
0.1


1414.7
3.5

0.2
15.9
Continued
                                     232

-------
Table II-D.  (Contd.)  f. Intertidal protected unconsolidated













Chlorophyta
Enteromorpha spp.
Phaeophyta
Fucus distichus
ro Rhodophyta
CO
Rhizoclonium sp.
4J

•H t^
o n)
Cu FM ej ?>•> PQ
B is to
CO i-i O PQ O
U 4J 4J 00
(U W ,C iH
,£) Jrf 
cd cd
PQ PQ

CO W
rH 4-1
iH 0
•H O
T3 CD
CO (U
^ s

2.4



14.0 *
o
.0
M
Rj
P^

f-J
o
4-J
^i
(0
M
Q

2568.0

76.0


Angiosperms
  Zostera marina
Nemertea spp. pre.

Nematoda spp. det.

Oligochaeta spp. det.

Polychaeta
Arenicolidae
  Abarenicola sp./
  A., pacifica dep.

74

120

248

2


.0

.2

.9

.0


222.
1.
1092.
2.
360.
3.



0
7
5
3
7
5



25
1
150
3
24460
2
827
14
300.0
.2 5.6
.2
.1 2.0
.3
.7 2.8
.0
.8
.0
5.2 944
48.4 31
1.2 1
36

140.4 14

26
4
.0
.2 131.5
.2
.0 3334.6

.0 8783.7

.8 209.1
.0
736.0
20.0
2.0


13.6



Continued
*present, but not quantified

-------
       Table  II-D.   (Contd.)   f.  Intertidal protected unconsolidated
CO












Polychaeta (Contd.)
Capitellidae
Capitella capitata dep.

Mediomastus sp. dep.

Notomastus tenuis dep.

Cirratulidae spp. dep.

Chaetozone sp.,
Tharyx multifilis)
Dorvilleidae
Dorvillea spp. pre.

Glyceridae
Hemipodus borealis pre.

Goniadidae
Glycinde picta pre.





g.
5
o

,0
ft
0)
Gc


458.0

2620.0

38.0

924.0




546.9


1,7


40.5


4J
rt
•H
Q
PH
4J
4J
>
rt rt nJ
>•> PQ M «
M 0 n) +J
00 iH -M
J2 rH «H O
0 C8 -rt 0
)_l nQ T3 CO
•H -H nj 0)
pq PH PM 3=


48.8 39.6 52.8 1472.8
0.7
10.0 4470.6

2.8 17.6 31.4 13.7
0.8 1.6
7397.5




3.6 1233.7


0.8 0.3


13.6 26.8 4.0
0.8 1.2
M
O
^
H
cd
EC
C
O
•p
>1
cd
M
O


19.6
0.4
52.0
2.0
92.0
4.4
16.0
0.6



26.4
7r>
.2




135.6
3.6
        Continued

-------
         Table II-D.   (Contd.)   f.  Intertidal  protected unconsolidated
no
OJ
en




a

cd
u

^o
ff)
01

Polychaeta (Contd.)
Lumbrineridae
Lumbrineris spp. dep. 571.2

Maldanidae spp. dep. 167.5

Nephtyidae
Nephtys spp. pre. 0.6

Nereidae
Platynereis bicanaliculata 816.2
her.
Opheliidae
Annaridia brevis dep. 456.4

4-1
a
•H
O
PH

4-1
4-1
01
&
O

P
CO
^


461.5
6.8
444.5
0.8




96.8
0.5

50.2
1.2


J>^
CO
>% pq
a]
W O
00
_r*j f— f
u n)
)-< -O
•H -H
pQ pM




0.8


16.0 2.0
1.6 0.4

2.0


17.2 6.4
2.8


>, >.
CO CO
pq pq

(0 4->
rH 4-1
r-l O
•H O
T3 CO
CO Q)
PH &


26.2

305.0


0.3


2446.9


4.0 2783.7

M
O
J3
M
tfl
PC

(3
0
4J
^
<0
}-i
0







1.6
0.8

1.2


22.8
0.8
         Continued

-------
           Table II-D.   (Contd.)  f. Intertidal protected unconsolidated
r\>
oo
!
CJ
» *
CD CQ co
FP ' PQ }rj
cs w a
iH 4J O
rH O 4J
•H 0 >,
*o TO a>
CO 0) M
(^ S Q
0.3
1.2 16.6
39.7 2.0
5.6 335.6 1.2
159.7
268.7
               sus./dep.



           Continued

-------
          JiaDJie LL-U.  (.Contd.;   ±.  Intertidal protected unconsolidated
IND
CO







Polychaeta (Contd.)
Spionidae spp. dep.

Malacoceros glutaeus dep.

Polydora spp. dep.

Pygospio elegans sus. dep.

Streblospio benedicti dep.
Syllidae
Exogone spp. pre.

Terebellidae
Pista spp. dep.

Polycirrus spp. dep.


c
•H
CX CM
CO 4-)
CJ 4J
01
JQ ^4
& CJ
QJ 0)
S PQ

16.9 1644.1
7.5
44.8

446.9

74.1 115.7
0.7


2142.0 1195.3
2.0

437.9 158.7
2.0




g
0
4-1
CO
0)
1

8845.7
3.7
3291.3
1.7
431.0
0.8
4754.3
1.2


1366.0
1.3







s $ $ S
PQ O cO 4J
60 iH 4J
•C rH rH O
cJ cd -H cj
M *O *T3 CO
•H "H CO CO
W F^ PH 3

14.0 6.0 0.3

0.8 27.2

11.2 1.4 27.2 1070.0

8.0 9.6 47.8

50.8

2319.4


47.2



14
0
,0
W

o
4->
Q

1.2



24.0
0.8









90.0
2.4
         Continued

-------
        Table II-D.   (Contd.)   f.  Intertidal protected unconsolidated
IN3
CO
oo

Polychaeta (Contd.)
Mollusca - Bivalvia
Clinocardium nuttallii
sus.
Cryptomya calif ornica sus.
Macoma nasuta dep./sus.
Macoma spp. dep./sus.
Mya arenaria sus./dep.
Mysella tumida sus.
Mytilus edulis sus.
Protothaca staminea sus.
Tapes japonica sus.
Continued
CX PM
00 4J
U 4J
0)
J2 X
-D U
OJ a)
5.6 145.3
9.5
95.6
23.4 28.7
5.5
19.7
0.6 3624.2
8.0
10.9 812.8
2.3
54.4 94.2
6.7
0.7
5 to
4-1
(D JS
5 -H
<-} «
7.6
5.6
2.0
13.7 0.8
60.3 8.0
32.0 23.6
2.8 4.8
12.0
1.2
36.0
7.6
1.2
«
0
bO
rH
01
'O
•H
6.0
4.8
21.6
144.4
6.4
2.8
7.6
12.4
1.2
1.6
Padilla Bay
6.8
40.0
6.8
3.2
13.6
18.4
1.2
10.8
Wescott Bay
Drayton Harbor
2.5
130.4
6.4
149.4 10.0
8.0
33.7 44.0
9.6
14.1 8.0
6.4
1.2
0.9 30.4
30.4
22.2 0.4
1.6
8.0
23.2

-------
       Table II-D.  (Contd.)  f. Intertidal protected unconsolidated
ro
CO
1
1
Mollusca - Bivalvia (Contd.)
Transennella tantilla sus. 1196.2
Tresus spp. sus. 0.6
Molluscs - Gastropoda
Aglaja diomedea pre. 16,6
Eubranchus olivaceous pre.
Haminoea vesicula pre.
Lacuna varie^ata her.
Littorina scutulata her. 0.6
Littorina sitkana her. 22.2
Nassarius mendicus pre.

Beckett Point
242.8
2.3
76.8
41.5
348.3
2.2
5.8
2.8
fr & %
CO co Co
g f*. W rt Pd
o FP o o) 4J
4J 00 »H *J
CO J3 H H O
ci; o n) -H o
0 >-l T3 "O W
CO -H -H OJ 0)
1-3 pq fn P^ ts
1666.2 6.0 1052.8
6.0
1.2 13.6 2.0 52.5
0.4
17.6
3.2 7.2 0.6
0.4
120.0
.04
22.8
2.4
Drayton Harbor
3.6
0.8
0.8
0.1
22.8
1.6
30.4
0.4
       Continued

-------
         Table  II-D.   (Contd.)   f.  Intertidal protected unconsolidated
ro
-p»
o
P.
1
Phoronida
Phoronopsis harmeri sus.
Crustacea - Tanaidacea
Leptochelia dubia sus. 1779.2
Crustacea - Cirripedia
Balanus glandula sus. 12.6
Crustacea - Amphipoda
Caprella sp. dep. 190.3
Gammaridea sp. 908.4
(Corophium sp. sus. /dep.,
Eohaustorius dep.,
Anisogammarus sp. her.,
Orchestia traskiana sea.,
Parophoxus sp. dep.)
Crustacea - Isopoda
Exosphaeroma sp. sea. 5.2
Beckett Point
6372.7
3.5
676.3
612.0
690.5
4.7
420.5
4.0
cd cd cd
a >•> PQ w w
3 Cd
o PQ o cd 4-1
*J 00 r-t *-"
CO ,C rH i-H O
a> u cd T( o
§M "O IO TO
•H JH «d «
<-> pq N 0* 3
12.0 97.6
1.6
670.3 8.4 1.6 1010.0
2.3
20.0 28.0 0.3
1.2 1.1
1.2 435.9
553.0 445,6 302 290.0 6395.9
6.8 2.4
Dray ton Harbor
194.0
2.0
180.0
0.8
378.0
66.8
6.0
0.4
316.0
2.8
          Continued

-------
        Table II-D.  (Contd.)  f. Intertidal protected unconsolidated
ro
1
Crustacea - Isopoda (Contd.)
Gnorimosphaeroma oregonensis 74.3
sea.
Crustacea - Decapoda
Hemigrapsus oregpn.ensis sea. 1.1
Pagurus spp . dep. 1.9
Pinnixa sp. pre. 26.8
Upogebia pugettensis
sus . /dep.
Insecta - Dipteraii larvae 2.5
spp. her. /dep.
Echinodermata
Dendraster excentricus dep.
Leptosynapta clarki dep.

•u
C
o cd td at
O« (3 >• PQ PP W
3 ctj
w o m o cd 4J
4J 4-1 00 rH 4-*
QJ CO JS H iH O
^i CO O Cd -H O
O fi P T) T3 CD
0) «j -H -H W 0)
« >-3 PQ fe flj tS

0.4 0.4


7.6 1.2 12.4
4.0 0.4 1.6
4.3 0.4 0,3
0.3
22.2 20.3
1.0
112.7 0.6 5.2
34.3 2.8
4.0 122.8

264.8
9.5
44.5 57.2 0.4 0.4
1.5 2.0
Drayton Harbor




12.4
6.4
12.8
0.4
1.0



        Continued

-------
Table II-D.  (Contd.)  g. Subtidal protected unconsolidated
                                 Beckett
                                  Point
           James town
           Birch   Fidalgo
            Bay	Bay
Phaeophyta

  Laminaria saccharina

Khodophyta

  Gracilariopsis sjoestedti

  Neogardhiella baileyi

Angiosperms

  Zostera marina

Nemertea spp. pre.


Nematoda spp. dep.


Oligochaeta spp. det.


Polychaeta

Ampharetidae

  Ampharete arctica dep.


Capitellidae

  Mediomastus sp. dep.


Chaetopteridae

  Mesochaetopterus taylori
    sus./dep.

  Phyllochaetopterus
    prolifica sus./dep.

  Spiochaetp_p_terus_ costarum
    sus./dep.

Cirratulidae

  Tharyx multifilis dep.


Dorvilleidae

  Protodorvillea gracilis
    pre.

Continued
 330.0
   2.0
 260.0
 <  2.0
 158.0
<  2.0
 413.0
<  1.0
 135.0
<  2.0
133.0
  2.0

881.0
< 2.0

445.0
< 2.0
               120.0
                 1.0
               611.0
                 2.0
180.0
  2.0
               131.0
                 2.0
               146.0
                 2.0
                         996.7
4945.0
  64.2
   1.7
                          428.0
                            0.1
           165.0
             1.3
             1.7
 175.0
 390.0


1036.7
  27.5
   1.5
            44.3
             0.4
                                    242

-------
Table II-D.  (Contd.)  g. Subtidal protected unconsolidated
Beckett
Point
Polychaeta (Contd.)
Goniadidae
Glycinde picta pre.
Hesionidae
Micropodarke dubia dep. 758.0
2.0
Lumbrineridae
Lumbrineris spp. dep.
Maldanidae
Maldane glebiflex dep.
Nicoinache personata dep .
Nereidae
Platynereis bicanaliculata 1728.0
her. 1.0
Opheliidae
Annandia brevis dep.
Oweniidae
Owenia fusifonnis dep. 68.0
2.0
Phyllodocidae
Eulalia sanguinea pre. 203.0
Z.U
Phyllodoce spp. pre. 517.0
— 	 2.0
Polynoidae
Hartnothoe imbricata pre.
Sabellidaa
Sabella media sus .
Birch Fidalgo
Jamestown Bay Bay
67.5 92.5
1.1 1.1
521.0 3.3
2.0
34.2 88.3
2.2 2.7
127.5 4.2
3.1 0.2
220.0
2.0
251.0 17.8
2.0 0.1
247.5 50.2
0.5 0.2
90.0 3555.8 241.0
1.5 28.0 2.7
1.7
22.5 4.2
0.2
308.0 24.3 2.5
2.0 0.4 0.2
135.0
i n
 Continued
                                      243

-------
Table II-D.  (Contd.)  g. Subtidal protected unconsolidated


                                 Beckett                    Birch   Fidalgo
	Point	Jamestown	Bay	Bay

Polychaeta (Contd.)

Scalibregmidae

  Scalibregma inflatum dep.                                           259.2
  	                                                  5.8
Spionidae

  Polydora spp. dep.               578.0          36.0       50.8     362.5
                                      2.0           2.0        0.8       1.0

  Prionspio steenstrupi  dep.       1180.0          156.0       30.0       8.3
                                      2.0           2.0        0.2

Sternaspidae

  Sternaspis scutata  dep.                                    68.3       25.0
  	                                         8.2       0.8

Syllidae

  Exogone  sp. pre.                               1383.0
                                                   2.0

Mollusca - Gastropoda

  Alvinia  sp. sea./dep.             328.0          218.0       74.5       4.2
                                      4.0           2.0        0.2

  Margarites  spp.  her.                            211.0       12.7
                                                    2.0        0.1
Mollusca - Bivalvia
  Axinopsida  serricata sus.                                  ou.u      LI^.L
  	                                       0.3        1.4

  Clinocardium  nuttalj^ sus.                       115.0       284.2        7.5
                                                    2.0         1.8

  Crenella decussata sus.                         726.0
                                                    2.0

  Macoma spp. sus./dep.             203.0          289.0       167.5       77.5
  	                             3.0           19.0        26.5       40.9

  Mysella  tumida sus./dep.         2183.0          865.0      1480.0      160.8
                                      3.0            2.0         7.5        0.6

   Nucula  tenuis dep.                                        106.7      54.2
  	                                               1.5        0.8

 Continued
                                     244

-------
Table II-D.  (Contd.)  g. Subtidal protected unconsolidated
Beckett
Point
Mollusca - Bivalvia
Psephidia lordi sus.
Tellina spp. sus./dep. 261.0
11.0
Crustacea - Tanaidacea
Leptochelia dubia dep. 788.0
2.0
Crustacea - Amphipoda
Gammaridea spp. dep. 3001.0
4.0
Crustacea - Decapoda
Pagurus spp. dep. 158.0
2.0
Pinnixa occidentalis pre.
Pugettla gracilis her.
Echinodenns
Leptosynapta clarki dep.
Birch
Jamestown Bay

183.0 410.8
2.0 4.7
68.3
0.8
2008.0 7.5
2.0
1598.0 746.2
3.0 4.1
6.7
0.2
830.0
10.4
88.0
2.0
95.8
Fidalgo
Bay

817.2
6.8
7.5
0.6
50.8
705.5
3.1
0.8
158.3
1.7
0.8
1.7
                                      245

-------
                        APPENDIX III







         PERCENT OCCURRENCE, MEAN DENSITY  (No./knf )




       AND STANDARD DEVIATION FOR COMMON BIRD SPECIES




IN INTERTIDAL/SUBTIDAL, NEARSHORE, AND OFFSHORE HABITAT TYPES
                             247

-------
Table III-A.  Percent occurrence, mean density (No./km2) and standard
              deviation of common bird species in intertidal/subtidal,
              rock (exposed rock) habitat
   Species
    SPRING (n=21)
       Mean
%     Density	S.D.
                         SUMMER  (n=6)
                            Mean
                           Density    S.D.
Great Blue Heron

Common Goldeneye

Bufflehead

Harlequin Duck

White-winged Scoter

Surf Scoter

Black Scoter

Bald Eagle

Spotted  Sandpiper

Glaucous-winged Gull

Western  Gull

Herring  Gull

Thayer's Gull

California Gull

Mew Gull

Bonaparte's Gull

Heermann's Gull

Common Tern
19
14
19
19
5
19
5
90
1.09
0.21
0.14
1.76
0.03
0.24
0.03
10.65
4.13
0.61
0.31
4.20
0.13
0.60
0.13
17.45
 5

29
 0.02

12.54
 0.12

36.04
                              17
                              17
                             100
                             0.10
                           0.22
                              0.24
                              7.87
                            0.53
                            6.41
                                     248

-------
%
10






10

90
10
7

33
17
73
23
17
FALL
Mean
Density
0.31






0.04

17.54
12.12
0.10

16.35
0.42
124.87
1.39
3.52
(n-30)
S.D.
1.04






0.13

34.18
63.31
0.46

54.68
1.41
231.72
5.02
9.66
WINTER (n=31)
Mean
% Density S.D.
6 0.14 0.54
19 0.30 0.76
32 1.76 5.42
16 0.23 0.80

23 1.65 3.49

32 0.50 1.04

100 16.85 23.31


19 0.40 0.97

61 10.88 25.01
26 2.85 6.66


Species
Great Blue Heron
Common Goldeneye
Bufflehead
Harlequin Duck
White-winged Scoter
Surf Scoter
Black Scoter
Bald Eagle
Spotted Sandpiper
Glaucous-winged Gull
Western Gull
Herring Gull
Thayer's Gull
California Gull
Mew Gull
Bonaparte's Gull
Heermann's Gull
Common Tern
249

-------
Table III-B.  Percent occurrence, mean density (No./km2) and standard
              deviation of common bird species in intertidal/subtidal
              rock (protected rock) habitat
   Species
SPRING (n=27)
   Mean
  Density       S.D.
SUMMER (n=7)
   Mean
  Density    S.D.
Great Blue Heron
Greater Scaup
Common Goldeneye
Bufflehead
Oldsquaw
Harlequin Duck
White-winged Scoter
Surf Scoter
Bald Eagle
Killdeer
Glaucous-winged Gull
California Gull
Mew Gull
Bonaparte's Gull
Heermann's Gull
Common Tern

4
15
30

18
15
41
15

100

7
18



0.15
0.34
2.33

0.68
0.66
12.44
0.22

22.37

0.28
27.52



0.79
0.94
5.12

1.84
1.60
47.67
0.54

11.73 100 34.86 51.23
14 0.12 0.29
1.26
119.53


                                    250

-------
%
28






22
6
3
97
22
9
87
31
12
FALL
Mean
Density
0.68






2.71
0.09
0.16
42.80
0.42
0.13
229.12
29.80
0.25
(n-30)
S.D.
1.39






8.04
0.36
0.87
98.49
0.93
0.47
457.33
101.24
0.79
WINTER (n=31)
Mean
% Density S.D.
15

44
82
26
32

62
26

100

65
32


0.36 1.15

1.78 3.02
16.16 28.21
1.10 2.79
1.28 3.09

4.62 6.39
0.45 0.95

17.45 15.42

7.69 17.19
35.96 153.73


Species
Great Blue Heron
Greater Scaup
Common Goldeneye
Bufflehead
Oldsquaw
Harlequin Duck
White-winged Scoter
Surf Scoter
Bald Eagle
Killdeer
Glaucous-winged Gull
California Gull
Mew Gull
Bonaparte's Gull
Heenaann's Gull
Common Tern
251

-------
Table III-C.  Percent occurrence, mean density (No./km2) and standard
              deviation of common bird species in intertidal/subtidal
              rock (cobble) habitat
Species
Great Blue Heron
Mallard
Greater Scaup
Common Goldeneye
Bufflehead
Oldsquaw
Harlequin Duck
White-winged Scoter
Surf Scoter
Killdeer
Sanderling
Glaucous-winged Gull
California Gull
Mew Gull
Bonaparte's Gull
Heermann's Gull
SPRING (n=49) SUMMER (n=L6)
Mean Mean
% Density S.D. % Density S.D.
6 0.05 0.18
6 0.16 0.63
22 11.85 48.21
26 0.61 1.64
22 2.29 7.83
31 5.95 24.86
33 3.34 14.10 19 2.93 7.64
41 27.42 168.24 19 0.76 1.69
80 1090.17 2966.04 37 9.02 27.92
13 0.04 0.12

80 30.44 56.78 100 13.42 11.93
13 0.53 1.71
35 18.53 72.19 6 0.03 0.12
59 89.38 322.67 6 0.06 0.24

                                     252

-------
%
12





43
37
57

12
100
32
25
78
34
FALL
Mean
Density
0.05





1.58
0.76
8.08

0.85
9.09
1.23
0.76
6.60
5.54
(n=65)
S.D.
0.16





3.44
1.58
14.14

2.92
11.85
6.02
2.71
11.69
17.21
WINTER (n=54)
Mean
% Density S.D.


67 9.60 22.28
70 2.61 3.87
74 7.58 19.56
59 2.29 3.39
50 1.17 1.83
48 1.06 2.07
100 25.14 40.64


93 8.57 10.36

46 2.45 6.49
18 0.67 1.93

Species
Great Blue Heron
Mallard
Greater Scaup
Common Goldeneye
Bufflehead
Oldsquaw
Harlequin Duck
White-winged Scoter
Surf Scoter
Killdeer
Sander ling
Glaucous-winged Gull
California Gull
Mew Gull
Bonaparte's Gull
Heermann's Gull
253

-------
Table III-D.  Percent occurrence, mean density (No./km2) and standard
              deviation of common bird species in intertidal/subtidal,
              exposed unconsolidated (mixed coarse) habitat
SPRING (n=49) SUMMER (n=15)
Mean Mean
Species % Density - S.D. % Density S.D.
Great Blue Heron
Greater Scaup 24
Common Goldeneye 41
Bufflehead 51
Oldsquaw 16
Harlequin Duck 33
White-winged Scoter 63
Surf Scoter 84
Black Scoter 26
Bald Eagle
Killdeer
Glaucous-winged Gull 86
Western Gull
California Gull
Mew Gull 35
Bonaparte's Gull
Heermann's Gull
47 1.02 2.45
1.65 4.60 7 0.03 0.12
1.91 4.31
15.22 39.29
0.24 0.65
0.67 2.12 13 1.95 5.25
2.46 4.02 20 0.90 2.35
13.20 21.42 40 7.27 20.38
1.50 5.28
7 0.11 0.39
7 0.02 0.08
57.54 91.37 73 33.39 54.76

13 0.81 2.86
4.69 17.02
13 1.92 6.24

                                     254

-------
%
33




17
47
65



73
11
58
33
57
47
FALL
Mean
Density
0.59




0.85
7.56
10.15



53.73
0.63
47.75
14.35
20.75
12.87
(n=81)
S.D.
1.30




2.83
16.99
17.93



104.33
3.74
165.69
110.82
61.00
36.87
WINTER (n=87)
Mean
% Density S.D.

54 6.18 11.62
85 11.64 14.59
86 36.84 70.33
57 16.97 128.85
40 3.14 6.79
60 3.28 6.69
90 16.62 18.50
65 2.75 4.32


76 112.12 387.31


68 47.01 225.14


Species
Great Blue Heron
Greater Scaup
Common Goldeneye
Bufflehead
Oldsquaw
Harlequin Duck
White-winged Scoter
Surf Scoter
Black Scoter
Bald Eagle
Killdeer
Glaucous-winged Gull
Western Gull
California Gull
Mew Gull
Bonaparte's Gull
Heennann's Gull
255

-------
Table III-E.  Percent occurrence, mean density (No./km2) and standard
              deviation of common bird species in intertidal/subtidal,
              exposed unconsolidated (sand) habitat
SPRING (n=4) SUMMER (n=3)
Mean Mean
Species % Density S.D. % Density S.D.
Great Blue Heron
Common Goldeneye 25
Bufflehead 25
Oldsquaw
Harlequin Duck
White-winged Scoter 25
Surf Scoter 75
Bald Eagle 50
Killdeer
Glaucous-winged Gull 100
California Gull
Mew Gull 25
Bonaparte's Gull 25
Heermann's Gull
Common Tern

3.18 5.51
4.55 7.87


1.98 3.43
6.13 3.93
0.68 0.75 67 0.72 0.53
33 0.14 0.20
14.72 7.54 100 44.36 19.80
67 0.86 0.68
0.45 0.79 67 0.86 0.68
19.77 34.25

«
                                    256

-------
%
10




20
30
20

100
60
20
60
80
30
FALL
Mean
Density
0.09




1.21
17.11
0.17

103.08
9.76
67.86
44.06
26.69
50.00
(n-10)
S.D.
0.27




2.89
39.19
0.35

131.94
19.07
203.44
98.88
46.59
142.53
WINTER (n=7)
Mean
% Density
29
14
100
71
29
29
86


100

57
43


1.17
0.39
15.83
2.31
8.05
0.31
8.17


25.83

6.75
3.18


S.D.
2.51
0.95
14.63
2.21
13.46
0.50
9.90


35.05

14.34
7.25


Species
Great Blue Heron
Common Goldeneye
Bufflehead
Oldsquaw
Harlequin Duck
White-winged Scoter
Surf Scoter
Bald Eagle
Killdeer
Glaucous-winged Gull
California Gull
Mew Gull
Bonaparte's Gull
Heermann's Gull
Common Tern
257

-------
Table III-F.  Percent occurrence, mean density (No./km2) and standard
              deviation of common bird species in intertidal/subtidal,
              protected unconsolidated (mud-gravel) habitat
Species
Great Blue Heron
Black Brant
Common Pintail
American Wig eon
Greater Scaup
Common Goldeneye
Bufflehead
Oldsquaw
Harlequin Duck
White-winged Scoter
Surf Scoter
Black Scoter
Western Sandpiper
Glaucous-winged Gull
California Gull
Mew Gull
Bonaparte's Gull
Heermann * s Gull
SPRING (n=ll)
Mean
% Density S.D.
64 0.38 0.40
64 11.08 13.25


54 30.70 63.28
64 0.54 0.67
73 21.29 32.81


91 43.27 73.64
100 122.03 247.08
91 1.89 2.83

100 36.82 38.90

64 1.42 1.53


SUMMER (n=2)
Mean
% Density S.D.
100 1.45 1.33







. 50 0.24 0.24
50 0.03 0.03
100 0.61 0.50


100 14.33 7.33


50 0.03 0.03

                                     258

-------
FALL (n=9)
Mean.
% Density S.D.
100 0.97 0.72


11 1.47 4.16





78 12.62 18.22
89 9.36 13.93

11 0.80 2.27
100 29.06 32.84
56 4.23 8.48
56 0.49 0.80
78 8.09 12.60
22 0.13 0.29
WINTER (n=12)
Mean
% Density S.D.


50
75
83
100
100
83

92
100
50

100

100




1.61
11.99
171.45
57.82
100.55
62.61

52.59
140.63
0.13

32.29

14.42




2.02
19.58
325.27
111.06
133.77
171.49

70.78
271.15
0.20

62.43

30.61


Species
Great Blue Heron
Black Brant
Common Pintail
American Wigeon
Greater Scaup
Common Goldeneye
Bufflehead
Oldsquaw
Harlequin Duck
White-winged Scoter
Surf Scoter
Black Scoter
Western Sandpiper
Glaucous-winged Gull
California Gull
Mew Gull
Bonaparte's Gull
Heermann's Gull
259

-------
Table III-G.  Percent occurrence, mean density (No./km2) and standard
              deviation of common bird species in intertidal/subtidal,
              protected unconsolidated (mud-sand) habitat
Species
Great Blue Heron
Black Brant
American Wigeon
Greater Scaup
Common Goldeneye
Bufflehead
SPRING (n=L7) SUMMER (n=2)
Mean Mean
% Density S.D. % Density S.D.

64
36
57
36
57

276.16
31.79
11.90
10.84
57.80
100 4.28 1.97
402.44
71.89
22.75
32.35
102.58
Harlequin Duck

White-winged Scoter

Surf Scoter

Killdeer

Black-bellied Plover

Black Turnstone

Glaucous-winged Gull

California Gull

Mew Gull

Bonaparte's Gull

Heermann's Gull
 79      14.91      34.01

100      22.45      14.67
 43
 29
 4.22
25.94
12.34
100     141.57     144.56
47.62
                               50
                              1.25     1.25
                      50     22.19    22.19

                     100    354.40    97.48
                                     260

-------
FALL (n=20)
Mean
% Density S.D.
55 4.07 6.66

40 752.20 1695.50




50 11.08 26.06
85 28.54 27.79
30 0.44 0.77


95 108.61 219.59
40 84.43 246.42
65 7.26 14.76
65 18.53 33.35
55 2.38 5.05
WINTER (n=27)
Mean
% Density S.D. Species
Great Blue Heron
67 122.44 314.75 Black Brant
89 411.26 544.59 American Wigeon
63 42.34 93.62 Greater Scaup
70 22.65 30.68 Common Goldeneye
96 274.10 445.80 Bufflehead
33 1.26 2.80 Harlequin Duck
74 14.59 22.67 White-winged Scoter
100 76.38 134.41 Surf Scoter
Killdeer
Black-bellied Plover
Black Turnstone
96 36.78 25.68 . Glaucous-winged Gull
California Gull
70 21.61 63.17 Mew Gull
Bonaparte's Gull
Heermann's Gull
261

-------
Table III-H.
Percent occurrence, mean density (No./km2) and standard
deviation of common bird species in intertidal/subtidal,
protected unconsolidated (mud) habitat
Species
Great Blue Heron
Black Brant
Mallard
Common Pintail
American Wigeon
Greater Scaup
Common Goldeneye
Bufflehead
Oldsquaw
White-winged Scoter
Surf Scoter
Bald Eagle
Killdeer
%
91
77



98
74
79
58
79
95


SPRING (n=43)
Mean
Density
1.73
. 147.25



65.13
1.60
23.25
0.86
6.15
73.71


S.D.
1.85
265.36



127.07
4.90
65.77
2.24
7.88
250.21


SUMMER (n=17)
Mean
% Density
100 6.75

41 0.16


76 3.30



65 1.18
71 2.12
59 0.04
71 0.77
S.D,
5.39

0.36


5.08



1.90
2.95
0.05
1.88
Dunlin

Glaucous-winged Gull      93

California Gull

Ring-billed Gull

Maw Gull                  56

Bonaparte's Gull
                    22.34
19.40
                     7.49
17.52
100    41.85    37.15
                                          35      0.65     1.58
                                          59      8.99    15.19
                                     262

-------
FALL (n=72)
Mean
% Density S.D.
96 5.24 5.84



72 47.01 145.45



75 9.82 16.17
87 18.99 46.68

75 0.91 1.38

97 20.38 22.09
72 2.64 5.13
82 5.10 7.42
75 7.13 15.55
93 29.73 144.75
WINTER (n=82)
Mean
% Density S.D. Species
Great Blue Heron
Black Brant
Mallard
88 49.32 88.85 Common Pintail
87 64.93 98.63 American Wigeon
99 67.51 66.91 Greater Scaup
95 8.23 15.63 Common Goldeneye
100 59.79 153.38 Bufflehead
Oldsquaw
99 10.38 14.88 White-winged Scoter
96 20.48 31.24 Surf Scoter
Bald Eagle
Killdeer
82 93.35 130.32 Dunlin
100 14.78 16.12 Glaucous-winged Gull
California Gull
Ring-billed Gull
89 7.91 14.62 Mew Gull
Bonaparte's Gull
263

-------
Table III-I.  Percent occurrence, mean density (No./km2) and standard
              deviation of common bird species in nearshore waters (less
              than 20 m) exposed unconslidated{mixed coarse) habitat
Species
Common Loon
Red-throated Loon
Red-necked Grebe
Horned Grebe
Western Grebe
Doub le-cres ted
Cormorant
Pelagic Cormorant
Common Merganser
Red-breasted Merganser
Glaucous-winged Gull
California Gull
Mew Gull
Bonaparte's Gull
Heermann's Gull
Pigeon Guillemot
Marbled Murrelet
Rhinoceros Auklet
SPRING (n=49)
Mean
% Density S.D.
67 1.42 2.12
47 0.72 1.50

55 4.26 6.08
51 2.70 4.60
41 1.37 3.32
92 4.71 4.07

65 8.26 13.43
86 57.54 91.37

35 4.69 17.02


63 2.78 5.02


SUMMER (n=15)
Mean
% Density S
57 0.47 0
20 0.12 0



20 0.10 0
73 2.95 5
13 0.73 2

73 33.39 54


13 1.92 6

80 3.81 3
33 2.13 6
27 5.74 13
.D.
.60
.30



.21
.43
.06

.76


.24

.95
.04
.64
                                     264

-------
%
63

42
41
36

47


73
58

57
47
43


FALL
Mean
Density
1.12

2.43
3.66
2.51

5.85


55.73
47.75

20.75
12.87
1.72


(n=81)
S.D.
1.43

5.30
7.40
5.93

23.21


104.33
165.69

61.00
36.87
3.43


WINTER (n=87)
Mean
% Density S.D.
68 1.32 1.56
46 0.64 1.26
45 1.78 4.10
82 8.14 10.45
75 13.56 33.30
56 3.32 5.71
74 5.82 8.00

72 6.29 9.79
76 112.12 387.31

68 47.01 225.14





Species
Common Loon
Red-throated Loon
Red-necked Grebe
Horned Grebe
Western Grebe
Double-crested
Cormorant
Pelagic Cormorant
Common Merganser
Red-breasted Merganser
Glaucous-winged Gull
California Gull
Mew Gull
Bonaparte's Gull
Heermann's Gull
Pigeon Guillemot
Marbled Murrelet
Rhinoceros Auklet
265

-------
Table III-J.
Percent occurrence, mean density (No./km2)  and standard
deviation of common bird species in nearshore waters (less  than
20 m) exposed unconsolidated (sand) habitat
Species
Common Loon
Arctic Loon
Red-necked Grebe
Horned Grebe
Western Grebe
%

25
75
50
50
SPRING (n=4)
Mean
Density

0.23
2.36
0.99
2.77
S.D.

0.39
1.82
1.12
3.40
SUMMER (n=3)
Mean
% Density
33 0.30




S.D.
0.43




Double-crested
  Cormorant

Black Brant

Pelagic Cormorant

Red-breasted Merganser

Glaucous-winged Gull

California Gull

Mew Gull

Bonaparte's Gull

Heermann's Gull

Common Murre

Pigeon Guillemot

Marbled Murrelet

Rhinoceros Auklet
                                          33
                                          33
100
100

25
25
25
50


4.68
14.72

0.45
19.77
0.23
0.91


2.69
7.54

0.79
34.25
0.39
1.11



100
67



33
33
33
0.69     0.98
0.14     0.20
                                         100     44.36    19.80

                                                  0.86     0.58
                                                  0.14     0.20

                                                  0.28     0.39

                                                  0.56     0.79
                                    266

-------
%


40


40
40
40

100
60

60
80
70


40
FALL
Mean
Density


2.48


0.88
5.63
0.36

103.08
9.76

44.06
26.69
41.88


22.85
(n-10)
S.D.


4.06


1.21
9.63
0.57

131.94
19.07

98.88
46.59
85.76


38.63
WINTER (n=7)
Mean
% Density S.D.

57 11.93 15.86
71 5.90 6.92
100 13.00 9.31
57 7.62 8.04



71 3.30 4.06
100 25.83 35.05

57 6.75 14.34
43 3.18 7.25

86 8.21 8.88
43 0.51 0.66


Species
Common Loon
Arctic Loon
Red-necked Grebe
Horned Grebe
Western Grebe
Double-crested
Cormorant
Black Brant
Pelagic Cormorant
Red-breasted Merganser
Glaucous-winged Gull
California Gull
Mew Gull
Bonaparte's Gull
Heerraann's Gull
Common Murre
Pigeon Guillemot
Marbled Murrelet
Rhinoceros Auklet
267

-------
Table III-K.
Percent occurrence, mean density (No./kiO and standard
deviation of common bird species in nearshore waters (less than
20 m) protected unconsolidated (mud-gravel) habitat
SPRING (n=ll) SUMMER (n=2)
Mean Mean
Species % Density S.D. % Density S.D.
Common Loon 91 1.13
Red-throated Loon 64 0.28
Red-necked Grebe 64 0.72
Horned Grebe 82 4.30
Western Grebe 91 21.31
Double-crested
Cormorant
Pelagic Cormorant 82 0.43
Red-breasted Merganser 100 2.58
Glaucous-winged Gull 100 36,82
California Gull
Mew Gull 64 1.42
Bonaparte's Gull
Pigeon Guillemot 91 2.87
Marbled Murrelet
Rhinoceros Auklet
0.89 50 0.03 0.03
0.47
1.15
5.54
30.61
50 0.26 0.26
0.76 50 0.03 0.03
2.29
38.90 100 14.33 7.33

1.53
50 0.03 0.03
4.50 100 1.54 1.24
50 0.28 0.28
50 0.68 0.68
                                     268

-------
FALL (n=9)
Mean
% Density S.D.
67 2.17 3.34

56 5.00 9.37
44 19.27 29.99
44 7.25 9.92



100 29.06 32.84
56 4.23 8.48
56 0.49 0.80
78 8.09 12.60
89 4.73 4.94

56 0.81 1.22
WINTER (n=12)
Mean
% Density S.D. Species
92 1.84 1.96 Common Loon
Red-throated Loon
100 2.65 2.82 Red-necked Grebe
100 14.98 14.63 Horned Grebe
92 44.00 46.00 Western Grebe
83 0.69 0.78 Double-crested
Cormorant
58 0.22 0.22 Pelagic Cormorant
75 8.11 15.15 Red-breasted Merganser
100 32.29 65.43 Glaucous-winged Gull
California Gull
100 14.42 30.61 Mew Gull
Bonaparte's Gull
92 0.95 1.31 Pigeon Guillemot
Marbled Murrelet
Rhinoceros Auklet
269

-------
Table III-L.  Percent occurrence, mean density (No./km2) and standard
              deviation of common bird species in nearshore waters (less
              than 20 m) protected unconsolidated (mud-sand) habitat
   Species
     SPRING (n=14)
        Mean
       Density
             S.D.
                SUMMER  (n=2)
                  Mean
            %     Density     S.D.
Common Loon

Red-throated Loon

Red-necked Grebe

Horned Grebe

Western Grebe

Double-crested
  Cormorant

Pelagic Cormorant

Red-breasted Merganser

Glaucous-winged Gull

California Gull

Mew Gull

Bonaparte's Gull

Heermann's Gull

Common Tern

Common ,Murre

Pigeon Guillemot

Rhinoceros Auklet
 64

 29



 50



 43


 57

 50

100



 29
  1.37

  0.24



  3.25



  0.43


  2.91

  2.39

141.57



 25.94
  1.44

  0.44



  4.42



  0.55


  4.42

  4.08

144.56



 49.62
64
43
4.69
1.94
6.56
4.57
 50
0.38     0.38
100    354.40    97.48
                               50
                               4.62     4.62
                                      270

-------
%
60


55


40

95
40
65
65
55
35

60

FALL (n=20)
Mean
Density S.D.
2.15 3.36


9.98 22.09


0.98 1.81

108.61 219.59
84.43 246.42
7.26 14.76
18.53 33.35
2.38 5.05
4.44 8.31

7.57 11.62

WINTER (n=27)
Mean
% Density S.D.
74 2.19 2.51

2.6 0.36 0.73
85 9.19 10.18
41 19.30 50.80
•
30 0.76 1.55
59 7.12 14.82
96 36.78 25.68

70 21.67 63.17



18 2.06 6.50
26 1.12 2.94

Species
Common Loon
Red-throated Loon
Red-necked Grebe
Horned Grebe
Western Grebe
Double-crested
Cormorant
Pelagic Cormorant
Red-breasted Merganser
Glaucous-winged Gull
California Gull
Mew Gull
Bonaparte's Gull
Heermann's Gull
Common Tern
Common Murre
Pigeon Guillemot
Rhinoceros Auklet
271

-------
Table I1I-M.  Percent occurrence, mean density (No./km 2) and standard
              deviation of common bird species in nearshore waters (less
              than 20 m) protected unconsolidated (mud) habitat
SPRING (n=43) SUMMER (n=17)
Mean Mean
Species % Density S.D. % Density S.D.
Common Loon 86 1.12
Red-throated Loon 53 0.18
Red-necked Grebe 70 0.62
Horned Grebe 65 1.97
Western Grebe 81 14.28
Double-crested 81 1.71
Cormorant
Pelagic Cormorant
Red-breasted Merganser 84 1.92
Glaucous-winged Gull 93 22.34
California Gull
Ring-billed Gull
Mew Gull 56 7.49
Bonaparte's Gull 46 6.69
Pigeon Guillemot
Marbled Murrelet
1.29 82 0.31 0.34
0.36
0.95
4.61
31.97 47 0.92 2.65
1.92 76 3.00 3.48

2.59
19.40 100 41.85 37.15
23 0.39 1.10
35 0.62 1.58
17.52 23 0.03 0.06
24.30 59 8.99 15.19
47 0.31 0.69
47 0.31 0.73
                                      272

-------
FALL (n=72)
Mean
% Density S.D.
83 1.66 2.52

69 4.19 15.19
65 3.76 7.40
65 20.70 36.20
86 3.91 4.85



97 20.38 22.09
72 2.64 5.13
82 5.10 7.42
75 7.13 15.55
93 29.73 144.75


WINTER (n=82)
Mean
% Density S.D. Species
96 1.32 1.41 Common Loon
74 1.75 5.93 Red-throated Loon
90 1.97 3.28 Red-necked Grebe
96 5.95 23.57 Horned Grebe
91 31.38 51.99 Western Grebe
93 3.16 4.27 Double-crested
Cormorant
52 6.28 52.42 Pelagic Cormorant
96 3.67 8.54 Red-breasted Merganser
100 14.78 16.12 Glaucous-winged Gull
California Gull
Ring-billed Gull
89 7.91 14,62 Mew Gull
Bonaparte's Gull
Pigeon Guillemot
Marbled Murrelet
273

-------
Table III-N.  Percent occurrence, mean density (No./km2) and standard
              deviation of common bird species in nearshore waters (less
              than 20 m) protected rock (exposed rock) habitat
Species
Common Loon
Red-necked Grebe
Horned Grebe
Western Grebe
SPRING (n=21) SUMMER (n=6)
Mean Mean
% Density S.D. % Density S.D.
24
24
29
19
0.21
0.59
1.02
1.08
0.41
1.29
2.82
2.59
Double-crested
  Cormorant

Pelagic Cormorant

Red-breasted Merganser

Glaucous-winged Gull

California Gull

Mew Gull

Black-legged Kittiwake

Bonaparte's Gull

Heermann's Gull

Common Tern

Common Murre

Pigeon Guillemot

Marbled Murrelet
43       0.73

43       1.81

90      10.65
29
33

14
12.54
 0.84

 0.90
            1.05

            3.46

           17.45
36.04
 2.01

 2.60
           50
          100
                              17
        0.39     0.46
        7.87     6.41
                              0.10     0.23
83      4.18     2.36

17      0.20     0.44
                                      274

-------
FALL (n=30) WINTER (n=31)
Mean Mean
% Density S.D. % Density

23
55
55
19
13 0.26 0.85 29
35
90 17.54 34.18 100

0.37
1.85
9.60
1.08
0.64
3.44
16.85
S.D.

0.86
2.85
28.20
2.71
1.25
7.46
23.31
Species
Common Loon
Red-necked Grebe
Horned Grebe
Western Grebe
Double-crested
Cormorant
Pelagic Cormorant
Red-breasted Merganser
Glaucous-winged Gull
33     16.35     54.68




17      0.42      1.41
73




23




17




23




23




27
124.87




  1.39




  3.54




  1.33




  0.61




  1.73
231.72




  5.02




  9.66




  3.00




  1.41




  4.82
                       61
                             26
                    10.88   25.01
        2.85
        6.66
26
0.63
1.23
California Gull




Mew Gull




Black-legged Kittiwake




Bonaparte's Gull




Heermann's Gull




Common Tern




Common Murre




Pigeon Guillemot




Marbled Murrelet
                                    Z75

-------
Table III-O.  Percent occurrence, mean density (No./km2) and standard
              deviation of common bird species in nearshore waters (less
              than 20 m) rock (protected rock) habitat
SPRING (n=27) SUMMER (n=7)
Mean Mean
Species . % Density S.D. % Density S.D.
Common Loon
Arctic Loon
Red-throated Loon 74
Red-necked Grebe 22
Horned Grebe 41
Western Grebe 22
Double-crested
Cormorant
Pelagic Cormorant 30
Red-breasted Merganser 44
Glaucous-winged Gull 100
29 1.07 1.82
14 0.12 0.29
0.70 1.62
1.10 3.16
2.34 4.11
6.77 24.03
14 0.48 1.17
1.03 1.97 29 7.40 17.40
3.13 5.37
22.37 11.73 100 34.86 51.23
California Gull

Mew Gull

Black-legged Kittiwake

Bonaparte's Gull

Heerniann's Gull

Common Murre

Pigeon Guillemot

Marbled Murrelet

Rhinoceros Auklet
                              14      0.12     0.29
                              14
18
27.52
119.53
30
18

1.28
0.68

3.16
1.60

86
14
29
                              0.18     0.44
                                      5.07     6.86

                                      0.71     1.75

                                      0.71     1.21
                                      276

-------
FALL (n-32)
Mean
% Density S.D.



25 0.52 0.97
19 1.48 5.41
28 9.18 19.68



97 42.80 98.49
22 0.42 0.93


87 229.12 457.33
31 29.80 101.24
44 61,28 261.44
22 1.75 4.95
56 19.98 41.47

WINTER (n=34)
Mean
% Density S.D.



76 2.82 2.54
82 6.31 6.87
79 40.20 53.64
41 1.03 1.91
38 1.24 1.89
71 7.03 7.84
100 17.45 15.42

65 7.69 17.19




38 1.47 8.03
38 3,07 8.26

Species
Common Loon
Arctic Loon
Red-throated Loon
Red-necked Grebe
Horned Grebe
Western Grebe
Double-crested
Cormorant
Pelagic Cormorant
Red-breasted Merganser
Glaucous-winged Gull
California Gull
Mew Gull
Black-legged Kittiwake
Bonaparte's Gull
Heermann's Gull
Common Murre
Pigeon Guillemot
Marbled Murrelet
Rhinoceros Auklet
277

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                                                       f\
Table III-P.  Percent occurrence, mean density (No./km ) and standard
              deviation of common bird species in nearshore waters (less
              than 20 m) rock (cobble) habitat
SPRING (n=49) SUMMER (n=16)
Mean Mean
Species % Density S.D. % Density S.D.
Common Loon 47
Arctic Loon 33
Red-throated Loon
Red-necked Grebe 46
Horned Grebe 26
Western Grebe 39
Double-crested
Cormorant
Pelagic Cormorant 33
Red-breasted Merganser 20
Glaucous-winged Gull 90
California Gull
Mew Gull 35
Bonaparte's Gull 39
Heermann's Gull
Common Murre
Pigeon Guillemot 20
Marbled Murrelet
Rhinoceros Auklet
0.76 2.40 38 0.32 0.43
34.52 120.95 12 3.63 13.60

1.22 2.89
0.72 1.88
8.45 42.78 25 0.87 2.19
12 0.12 0.31
0.68 2.84 25 0.26 0.53
0.29 0.79
30.44 56.78 100 13.42 11.93
12 0.53 1.71
18.53 72.19
89.38 322.67


0.29 0.66 56 1.09 1.68
37 1.05 2.13
19 1.26 3.00
                                      278

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%
49



32
37

48

100
32

78
34

43
43

FALL (n-65)
Mean
Density S.D.
0.52 0.72



1.08 2.38
4.21 17.37

1.15 3.14

9.09 11.85
1.23 6.02

6.60 11.69
5.54 17.21

1.02 2.04
1.01 1.86

WINTER (n=54)
Mean
% Density S.D. Soecies
72 0.61 0.55 Common Loon
Arctic Loon
43 0.84 1.86 Red-throated Loon
Red-necked Grebe
91 3.72 5.65 Horned Grebe
52 8.09 31.79 Western Grebe
Double-crested
Cormorant
61 1.69 3.32 Pelagic Cormorant
76 1.78 2.14 Red-breasted Merganser
93 8.57 10.36 Glaucous-winged Gull
California Gull
46 2.45 6.49 Mew Gull
Bonaparte's Gull
Heermann's Gull
35 2.34 6.50 Common Murre
Pigeon Guillemot
Marbled Murrelet
Rhinoceros Auklet
279

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Table III-Q.
Number of species, total density (No./km2)  and total
biomass for birds occurring in nearshore habitats in
spring 1978 and 1979, combined
     Habitat
                                 Number of   Total     Total
                                  Species   Density   Biomass
Exposed unconsolidated, mixed coarse

Exposed unconsolidated, sand

Protected unconsolidated, mud-gravel
  (mixed fine)

Protected unconsolidated, mud-sand
  (Mixed fine)

Protected unconsolidated, mud

Rock, exposed rock

Rock, protected rock

Rock, cobble
                                    16

                                     9


                                    16
A3.88

13.74


36.25
48.53

16.92


54.92
12
17
11
13
15
20.28
22.85
9.80
23.03
54.28
23.33
39.48
11.70
31.22
98.05
                                     280

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Table III-R.  Number of species, total density (No./km2) and total
              biomass for birds occurring in nearshore habitats  in
              summer 1978 and 1979, combined
     Habitat
Number of   Total     Total
 Species   Density   Biomass
Exposed unconsolidated, mixed coarse

Exposed unconsolidated, sand

Protected unconsolidated, mud-gravel
   (mixed sand)

Protected unconsolidated, mud-sand
   (mixed fine)

Protected unconsolidated, mud

Rock,  exposed  rock

Rock,  protected rock

Rock,  cobble
   12

    6
20.21

 4.81


 3.13
19.32

 8.80


 2.10
2
15
4
8
9
5.38
5.29
4.97
15.92
9.63
3.08
11.16
2.69
20.84
13.65
                                       281

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Table III-S.  Number of species, total density (No./km2) and total
              biomass for birds occurring in nearshore habitats in
              fall 1978 and 1979, combined
     Habitat
Number of   Total     Total
 Species   Density   Biomass
Exposed unconsolidated, mixed coarse

Exposed unconsolidated, sand

Protected unconsolidated, mud-gravel
  (mixed fine)

Protected unconsolidated, mud-sand
  (mixed fine)

Protected unconsolidated, mud

Rock, exposed rock

Rock, protected rock

Rock, cobble
   19

   14


   14
47.17     50.94

99.33    109.97
42.28
41.18
17
18
15
13
16
38.30
37.39
9.84
101.08
30.01
31.91
63.75
10.63
94.30
35.42
                                     282

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Table III-T.  Number of species, total density (No./km2)  and total
              biomass for birds occurring in nearshore habitats in
              winter 1978 and 1979, combined
     Habitat
Number of   Total     Total
 Species   Density   Biomass
Exposed unconsolidated, mixed coarse

Exposed unconsolidated, sand

Protected unconsolidated, mud-gravel
  (mixed fine)

Protected unconsolidated, mud-sand
  (mixed fine)

Protected unconsolidated, mud

Rock, exposed rock

Rock, protected  rock

Rock, cobble
   18

   15


   18
55.03

62.15


79.82
 81.36

 77.75


116.18
27
19
15
15
14
47.01
57.97
26.20
83.41
24.27
66.48
95.66
32.94
116.15
34.90
                                      283

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Table III-U.  Percent occurrence, mean density (No./km2) and standard
              deviation of common bird species in offshore waters
              (greater than 20 m) bays habitat
Species
Common Loon
Arctic Loon
Red-necked Grebe
Horned Grebe
Western Grebe
Pelagic Cormorant
Glaucous-winged Gull
California Gull
Mew Gull
Bonaparte's Gull
Common Murre
Pigeon Guillemot
Marbled Murrelet
Rhinoceros Auklet
SPRING (n=27) SUMMER (n=5)
Mean Mean
% Density S.D. % Density S.D.
18 0.25 0.67
22 0.96 2.64
37 1.31 2.46
22 1.02 2.50
78 70.60 89.99 60 2.17 2.46
18 0.36 0.88
96 6.58 6.13 100 10.86 9.84
20 4 . 00 8 . 00

33 3.80 9.72
22 3.27 10.22 40 0.33 0.42
20 0.09 0.18


                                     284

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        FALL (n=26)               WINTER (n=33)
        Mean                         Mean
_%	Density	S.D.	%     Density   S.D.	Species	

                                                      Common Loon

 11       1.79      7.71                               Arctic Loon

                              58      2.67     3.64   Red-necked Grebe

 8       0.26      1.00       36      2.56     8.66   Horned Grebe

 35      23.74     81.48       85    123.83    172.31   Western Grebe

                              27      0.55     1.29   Pelagic Cormorant

 92       4.95      7.26       94     11.98    14.67   Glaucous-winged Gull

 35       1.16      2.05                               California Gull

  8       0.06      0.20       67      3.33     6.57   Mew Gull

 42       2.97      6.40       39     16.83    58.08   Bonaparte's Gull

 50      76.91    256.69       79     40.35    75.86   Common Murre

                                                      Pigeon Guillemot

                              30       3.49      7.21   Marbled Murrelet

 11       0.32      1.06                               Rhinoceros Auklet
                                      285

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Table III-V.  Percent occurrence, mean density (No./km2) and standard
              deviation of common bird species in offshore waters
              (greater than 20 m) narrow passages habitat
Species
Arctic Loon
Red-necked Grebe
Western Grebe
Double-crested
Cormorant
Brandt's Cormorant
Pelagic Cormorant
Hooded Merganser
Glaucous-winged Gull
%
35
21
29
31
37
55

98
SPRING (n=62)
Mean
Density
84.15
0.37
0.59
0.33
85.68
.60

5.52
S.D.
281.11
1.14
1.29
0.83
265.05
1.04

5.99
SUMMER (n=23)
Mean
% Density



22 0.15
4 0.03
17 0.07
4 0.01
96 6.66
S.D.



0.37
0.13
0.20
0.04
6.16
Thayer's Gull

Mew Gull

Bonaparte's Gull

Common Tern

Common Murre

Pigeon Guillemot

Marbled Murrelet

Cassin's Auklet

Rhinoceros Auklet
24       0.41       1.76

33      44.88     153.74
68
2.38
3.49
 4

52

22

 4

 4
0.01

0.60

0.23

0.02

0.01
0.06

0.86

0.53

0.11

0.06
                                     286

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       FALL (n=83)
       Mean
      Density     S.D.
                        WINTER (n=112)
                            Mean
                           Density   S.D.
                                      Species
26

26


23
95
1.49

0.42
6.09
5.14

1.52
6.81     44.42
8.71
46
93
55
31
39
0.78
49.04
5.46
1.13
5.05
1.98
88.43
22.71
6.89
32.62
                             68
45
                            28.17
3.89
                           72.80
7.77
69     48.10   135.27

50      1.27     2.69



96     12.54    25.57

48      1.50     5.24

87     20.48    65.93
                              79      9.75    26.81

                              62      2.20     4.60

                              54      1.69     2.97
25
0.24
0.69
Arctic Loon

Red-necked Grebe

Western Grebe

Double-crested
  Cormorant

Brandt's Cormorant

Pelagic Cormorant

Hooded Merganser

Glaucous-winged Gull

Thayer's Gull

Mew Gull

Bonaparte's Gull

Common Tern

Common Murre

Pigeon Guillemot

Marbled Murrelet

Cassin's Auklet

Rhinoceros Auklet
                                     287

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Table III-W.  Percent occurrence, mean density (No./km^ and standard
              deviation of common bird species in offshore waters
              (greater than 20 m) broad passages habitat
   Species
    SPRING (n=48)
       Mean
      Density       S.D.
                         SUMMER (n=13)
                            Mean
                     %     Density    S.D.
Arctic Loon

Red-throated Loon

Western Grebe

Double-crested
  Cormorant

Brandt's Cormorant

Pelagic Cormorant

Glaucous-winged Gull

California Gull

Mew Gull

Bonaparte's Gull

Heermann's Gull

Common Murre

Pigeon Guillemot

Marbled Murrelet

Rhinoceros Auklet
17
21
8.59
1.71
44.53
 7.65
                              23
                             0.25
                            0.76
25
23
92
17
19
29
44

35
0.18
0.43
4.34
0.22
42.19
1.67
0.63

0.41
0.51
1.80 23
4.61 100
0.77
269.51
6.85 8
0.92 31
8
0.77 31

0.41 1.14
3.24 2.67


0.01 0.03
0.47 1.03
0.01 0.03
3.73 11.94
                                     288

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FALL (n=64)
Mean
% Density S.D.



20 2.80 17.77

16 0.15 0.66
92 10.62 17.54
33 0.62 1.76

47 6.17 17.51
42 2.98 9.82
67 42.61 70.38
16 0.16 0.52
25 0.41 1.22
25 0.55 1.92
WINTER (n=76)
Mean
% Density S.D. Species
28 2.20 13.23 Arctic Loon
29 0.29 0.81 Red-throated Loon
Western Grebe
Double-crested
Cormorant
42 8.06 53.19 Brandt's Cormorant
39 0.36 0.64 Pelagic Cormorant
93 10.00 23.86 Glaucous-winged Gull
California Gull
59 9.41 36.68 Mew Gull
21 6.74 38.11 Bonaparte's Gull
Heermann's Gull
92 63.77 146.00 Common Murre
38 0.40 0.83 Pigeon Guillemot
17 0.34 1.28 Marbled Murrelet
Rhinoceros Auklet
289

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Table III-X.
Percent occurrence, mean density (No./km2) and standard
deviation of common bird species in offshore waters
(greater than 20 m) open waters habitat
Species
Arctic Loon
Wester Grebe
Fork-tailed Storm
Petrel
Black Brant
Pelagic Cormorant
Northern Phalarope
Parasitic Jaeger
Glaucous -winged Gull
Herring Gull
Thayer's Gull
California Gull
Mew Gull
Bonaparte's Gull
Heermann's Gull
Common Kurre
Pigeon Guillemot
Ancient Murrelet
Rhinoceros Auklet
Tufted Puffin
SPRING (n=16)
Mean
% Density S.D.
25 2.12 7.22
19 0.09 0.30

12 0.64 2.42
25 0.22 0.80


87 0.82 0.70



37 0.27 0.50
44 6.20 22.63

62 0.80 1.98
19 0.03 0.10

56 1.09 1.95

SUMMER (n=9)
Mean
% Density S.D.

11 0.04 0.10
11 0.02 0.05
11 0.01 0.04
44 0.14 0.26


100 3.57 4.36




11 . 1.44 4.06

78 0.77 1.26
22 0.03 0.06

67 2.30 2.63
33 0.04 0.07
                                     290

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%






29
4
100
25

64
33
36
61
89


50

FALL (n=28)
Mean
Density S.D.






0.93 3.07
0.01 0.08
8.94 14.01
0.12 0.34

2.41 6.70
0.22 0.47
2.46 8.83
1.17 3.78
37.36 52.59


1.86 7.08

WINTER (n=36)
Mean
% Density
31 0.12




33 0.06


100 4.94
31 0.18
28 0.13

80 3.00
28 0.89

89 13.96

31 0.97
31 0.09

S.D.
0.30




0.16


5.70
0.67
0.28

8.31
2.18

26.71

2.24
0.20

Species
Arctic Loon
Western Grebe
Fork-tailed Storm
Petrel
Black Brant
Pelagic Cormorant
Northern Phalarope
Parasitic Jaeger
Glaucous-winged Gull
Herring Gull
Thayer's Gull
California Gull
Mew Gull
Bonaparte's Gull
Heennann's Gull
Common Murre
Pigeon Guillemot
Ancient Murrelet
Rhinoceros Auklet
Tufted Puffin
291

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Table III-Y.  Number of species, total density (No./km2) and total
              biomass for birds occurring in offshore habitats in
              spring 1978 and 1979, combined
                                               Number of   Total     Total
     Habitat                                    Species   Density   Biomass


Bays                                              21       103.06    164.54

Passages, narrow                                  29       229.29    407.93

Passages, broad                                   26        68.48     45.14

Open waters                                       23        15.62     12.88
                                     292

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Table III-Z.  Number of species, total density (No./km2) and total
              biomass for birds occurring in offshore habitats in
              summer 1978 and  1979, combined
                                               Number of   Total     Total
     Habitat                                    Species   Density   Biomass
Bays                                               6        17.65     22.09

Passages, narrow                                  14         8.29     11.52

Passages, broad                                    8         8.14      7.08

Open waters                                       15        12.80     10.32
                                      293

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Table III-AA.  Number of species, total density (No./km2) and total
               biomass for birds occurring in offshore habitats in
               fall 1978 and 1979, combined
Habitat
Bays
Passages , narrow
Passages , broad
Open waters
Number of
Species
15
30
26
30
Total
Density
118.63
84.50
77.25
72. 17
Total
Biomass
137.22
50.79
78.44
65.49
                                      294

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Table III-BB.  Number of species, total density (No./km2) and total
               biomass for birds occurring in offshore habitats in
               winter 1978 and  1979, combined
                                               Number of   Total     Total
     Habitat                                    Species   Density   Biomass
Bays                                              30       244.71    375.19

Passages, narrow                                  40       172.96    268.08

Passages, broad                                   33       122.77    125.07

Open waters                                       40        32.80     30.57
                                      295

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