4>EPA
United States
Environmental Protection
Agency
*1 NQAA^EPA fj
 Partnership \\
 t tj^gj^.,



^H^'
      Summary Report of
      Air Quality Modeling
  Research Activities for 2006
      RESEARCH AND DEVELOPMENT

-------
                                                         EPA/600/R-07/103
                                                               09/2007

                                                          NOAA Technical
                                                            Memorandum
                                                            OAR ARL-259
                                                               10/2007
             Summary Report  of
            Air Quality  Modeling
    Research  Activities  for 2006
ST. Rao, Robin Dennis, Valerie Garcia, Alice Gilliland, Rohit Mathur, David Mobley, Thomas Pierce, and Kenneth Schere

                         Atmospheric Modeling Division
                      National Exposure Research Laboratory
                       U.S. Environmental Protection Agency
                       Research Triangle Park, NC, 27711

                                and

                      Atmospheric Sciences Modeling Division
                          Air Resources Laboratory
                    National Oceanic and Atmospheric Administration
                         Silver Spring Maryland, 20910
 Notice: Although this work was reviewed by EPA and NOAA and approved for publication, it may not necessarily
     reflect official EPA or NOAA policy. Mention of trade names and commercial products does not constitute
     endorsement or recommendation for use.
U.S. Environmental Protection Agency          National Oceanic and Atmospheric Administration
Office of Research and Development           Office of Oceanic and Atmospheric Research
     Washington, DC 20460                     Silver Spring, Maryland, 20910

-------
                                         Notice
    The  research presented here  was performed under  the  Memorandum  of Understanding  and
Memorandum of Agreement between the U.S. Environmental Protection Agency (EPA) and the U.S.
Department of Commerce's (DOC's) National Oceanic and Atmospheric Administration (NOAA). It has
been subjected to EPA and NOAA peer and administrative review and has been approved for publication as
a joint EPA-NOAA  document.  Mention of trade names or commercial products does not constitute
endorsement or recommendation for use.
                                          ill

-------
                                        Abstract
    Through a Memorandum of Understanding (MOU) and Memorandum of Agreement (MO A) between
the Department of Commerce (DOC) and U.S. Environmental Protection Agency (EPA), the Atmospheric
Sciences Modeling Division (ASMD) of National Oceanic and Atmospheric Administration's (NOAA's)
Air Resources Laboratory (ARL) develops advanced modeling and decision support systems for effective
forecasting and management of the Nation's air quality. As a division within the EPA organizational
structure, ASMD is known as the Atmospheric Modeling Division (AMD). The Division is responsible for
providing a sound scientific and technical basis for regulatory policies to improve ambient air quality. The
models developed by the Division are being used by EPA, NOAA, and the air pollution community in
understanding and forecasting not only the magnitude of the air pollution problem, but also in developing
emission control policies and regulations. This report summarizes research and operational activities of the
Division for the year 2006.
                                            IV

-------
                                        Contents
Notice 	iii
Abstract  	iv
Acknowledgements 	viii
Chapter 1: Introduction	1
Chapter 2: Providing Scientifically-Advanced Models and Tools to Support Environmental 	4
Policy Decisions	4
    Introduction	4
    Research Description	4
    Accomplishments 	5
    Next Steps  	6
    Impacts and Transition of Research to Applications	6
Chapter 3: Evaluating the Impact of Regulatory Policies on Air Quality and Ecosystems 	9
    Introduction	9
    Research Description	9
    Accomplishments 	10
    Next Steps  	10
    Impacts and Transition of Research to Applications	10
Chapter 4: Linking Sources to Human Exposure 	12
    Introduction	12
    Research Description	12
    Accomplishments 	12
    Next Steps  	13
    Impacts and Transition of Research to Applications	13
ChapterS: Linking Sources to Ecosystem Exposure	14
    Introduction	14
    Research Description	14
    Accomplishments 	15
    Next Steps  	16
    Impacts and Transition of Research to Applications	16
Chapter 6: Providing Air Quality Forecast Guidance for Health Advisories	18
    Introduction	18
    Research Description	18
    Accomplishments 	18
    Next Steps  	19
    Impacts and Transition of Research to Applications	19
Chapter 7: Understanding the Relationships between Climate Change and Air Quality	21
    Introduction	21
    Research Description	21
    Accomplishments 	21
    Next Steps  	22
    Impacts and Transition of Research to Applications	22
Appendix A: Division Staff Roster 	23
Appendix B: Division and Branch Descriptions	27
Appendix C: Awards and Recognition	28
Appendix D: Publications	29
                                            v

-------
                                          Figures

Number                                                                                Page


1-1  The Division's role in the Source-Exposure-Dose-Effects Continuum	2
1-2  Strategy to meet user needs	3
2-1  Schematic of CMAQ modeling system, including meteorology, emissions, and air quality models	7
2-2  Schematic of paniculate matter/aerosol module in CMAQ model	7
2-3  Comparisons of monthly average PM2.5 species components observed at eastern U.S. STN sites
     with comparable results from CMAQv4.5 and CMAQv4.6 (from eastern U.S. simulation with
     12-km grids)	8
3-1  Back trajectories show Ohio River Valley as source region for high ozone levels at a site in
     the northeast (green trajectories indicate source regions of low ozone days and black
     trajectories indicate source regions of high ozone days) during the 2002 summer	11
3-2  NOX SIP Call evaluation showing maximum 8-hr ozone concentrations at 95th percentile for
     summer 2002 and summer 2004	11
4-1  Multiple scales in air quality modeling	13
5-1  CMAQ annual average wet plus dry, oxidized plus reduced nitrogen deposition (in kg-N/ha)
     across the U.S. based on 3 years of meteorology - one dry, one wet, and one average
     precipitation year - across the Eastern U.S	17
6-1  Forecast surface-level 8-hour maximum O3 concentrations on August 1, 2006	20
                                             VI

-------
                              Acknowledgements
    The authors thank Teri Conner of the National Exposure Research Laboratory and Patricia McGhee of
the Air Resources Laboratory for their technical editing and manuscript preparation. The report would not
have been possible without their contributions.
                                         vn

-------
                                                   Chapter 1
                                                 Introduction
September 2005  marked  the  50th  Anniversary  of  the
collaboration between the U.S. Department  of Commerce's
National Oceanic and Atmospheric  Administration (NOAA)
and the U.S. Environmental Protection Agency (EPA), and
their predecessor agencies on  air quality modeling research
and its application. The relationship between NOAA and EPA
began  when  the Air Pollution  Unit of the Public  Health
Service, which later became part of the EPA, requested the
Weather Bureau to  provide it with meteorological expertise.
Thus, a special Weather Bureau air pollution unit was formed
in 1955 and integrated with the Public Health Service.  It was
located in Cincinnati, Ohio, until it moved in 1969 to Raleigh,
North Carolina. Now called the NOAA Atmospheric Sciences
Modeling Division (ASMD), it works within the framework of
the Memorandum of Understanding and Memorandum  of
Agreement between the U.S. Department of Commerce and
EPA.   These  agreements are implemented through long-term
Interagency  Agreements DW13938483  and DW13948634
between EPA and NOAA.

The Division is organized into five research branches:
    •   Atmospheric Model Development Branch
    •   Model Evaluation and Applications Research Branch
    •   Air-Surface Processes Modeling Branch
    •   Air Quality Forecasting Research Branch
    •   Applied Modeling Branch

The first four branches listed above comprise the Atmospheric
Modeling Division (AMD) of the  National Exposure Research
Laboratory of the Office of Research and Development (ORD)
within EPA's organizational structure.  The fifth branch listed
is part of the Air Quality Assessment Division of the Office of
Air Quality Planning and Standards (OAQPS) within EPA's
organizational  structure.   Throughout  this report,  these
NOAA-EPA branches will be collectively referred to as "the
Division."  A listing of employees  and division and  branch
descriptions are located in the appendix along with a listing of
awards and publications.

The Division's role within the source-to-outcome continuum
is  to   conduct  research  that   improves   the  Agency's
understanding of the  linkages from source to exposure,  as
depicted in Figure l-l1.  Through its research branches, the
Division provides atmospheric sciences expertise, air quality
forecasting   support,   and   technical   guidance  on  the
meteorological and air quality modeling aspects of air quality
management  to various EPA offices, including  OAQPS
Regional Offices, state and local pollution control agencies,
and other federal agencies.

The  Division provides this technical support and expertise
using an interdisciplinary approach emphasizing integration
and  partnership  with  EPA  and public  and private research
communities.  Specific  research and development activities
are  conducted  in-house  and  externally via  contracts and
cooperative agreements.

In 2006, the  Division completed a major strategic  planning
process begun in 2002.  Six outcome-oriented theme areas
were identified:
    •   Providing scientifically-advanced models and tools to
        support environmental policy decisions
    •   Evaluating  the impact of regulatory policies on air
        quality and ecosystems
    •   Linking sources to human exposure
    •   Linking sources to ecosystem exposure
    •   Providing air  quality forecast guidance for health
        advisories
    •   Understanding  the  relationships  between  climate
        change and air quality.

Research  tasks  were developed  within each  theme area,
considering these questions:
    •   Over the next 2-3  years,  who  are the major clients
        and what are their needs?
    •   What research investments are  needed to further the
        science in a way that helps the client(s)?  How will
        we lead or influence the science in this area?
    •   What personnel expertise, resources, and partners are
        needed to do this work?
                                                             Exposure Science Research: A Conceptual Framework, November 2006
                                                            Draft by EPA's National Exposure Research Laboratory.

-------
    •   Does the proposed work fall within the current scope
       and plans  of  existing projects, or would people
       resources need to be shifted from other projects to
       make this happen?

The result  is a research strategy to meet user needs  built
around  six major theme areas and supported by  the five
branches of the Division, as depicted  in Figure 1-2.  The
Division's Applied Modeling Branch in turn supports these
research and development-focused branches by facilitating the
transition of atmospheric modeling systems and other research
tools to regulatory applications.

This report summarizes research and operational activities of
the  Division for the year 2006.  It includes descriptions of
research and operational efforts in air pollution meteorology,
meteorology and  air quality model development, model
evaluation and applications, and air pollution abatement and
compliance programs.  The report is organized by the major
program themes presented in Figure 1-2.
               Source-to-Outcome  Continuum
                       Figure 1-1. The Division's role in the Source-Exposure-Dose-Effects Continuum.

-------
Strategy to Meet User Needs

/

Sound Science for Environmental Decisions

1
/

Evaluating the impact of regulatory policies on air quality & ecosystems
Linking sources to human exposure
Linking sources to ecosystem exposure
Providing air quality forecasts guidance for health advisories
Und
erstanding the relationships between climate change and air qi
lality
/
Atmospheric Model
Development
Branch


Model Eval. &
Applications
Research Branch


Air- Surface
Processes Modeling
Branch


Air Quality
Forecasting
Research Branch


Applied Modeling
Branch

A
        Atmospheric Modeling Division
           Figure 1-2. Strategy to meet user needs.

-------
                                                  Chapter 2
           Providing Scientifically-Advanced  Models and Tools to Support
                                  Environmental  Policy  Decisions
Introduction
Air quality management in the U.S. is implemented for criteria
pollutants  through  the  National  Ambient  Air  Quality
Standards  (NAAQS).    The   states   must  submit  state
implementation plans (SIPs) for areas  that do not meet the
NAAQS, demonstrating how additional emissions  controls
will bring their areas into compliance with the NAAQS. The
principal tools that EPA and the states use to demonstrate this
compliance  are  air  quality simulation models.   Current
NAAQS exist for tropospheric ozone  (O3), fine paniculate
matter (PM25), coarse paniculate  matter  (PM10), and other
criteria pollutants.  EPA performs  a review of each NAAQS
every 5  years, and proposes changes  if the most  current
science  on health and ecological effects suggest changing the
standards.  In 2006, EPA  revised the standards for daily
average PM25 from 65 to 35 ug/m3,  and dropped the annual
average standard for PM10, leaving only the daily standard of
150  ug/m3.   When  areas of the country  are  designated as
exceeding the NAAQS for  a particular pollutant, the states
have at least three years to submit a SIP, including a modeling
demonstration illustrating  how  they   intend  to   mitigate
emissions to achieve compliance with the standards.

In addition to the NAAQS for the criteria pollutants, EPA and
the states also study mitigation strategies  for other types of
pollutants, such as hazardous air pollutants  (HAPS,  or air
toxics) and global pollutants, such as mercury.  While there
are a range of air quality policy-related issues that are tracked
separately for individual pollutants,  chemistry, and sources
involved in producing these air quality conditions are inter-
related.  Therefore, a multi-pollutant model is needed that can
simulate the atmospheric processes and emission source inputs
that contribute to all of these chemical species and conditions.
The Division develops, evaluates, applies, and refines such
models.  The principal modeling  platform, the Community
Multiscale Air Quality  (CMAQ)  modeling system,  includes
components  for meteorology,  emissions,  air quality, and
analysis with visualization (see Figure 2-1).
Research Description
The principal elements of the modeling program are Model
Development and Model Evaluation.  These elements are
inter-related, as model evaluation provides  information for
improving the models, models are improved through research
and development, improved  models are  re-evaluated,  and
improved models are then available for regulatory application.
Hence, the development and evaluation of the models form an
iterative process.

Through the Model  Development  program element,  the
Division develops and improves the CMAQ air quality model
for a  variety  of spatial (urban  through continental)  and
temporal (days to years) scales and for a variety of pollutants
(O3, PM, air toxics, mercury, visibility, acid deposition).  The
multi-pollutant  model approach  permits  the  testing  of
emissions control strategy impacts on the target pollutant, as
well as collateral impacts on other pollutants.

Focus areas of model development include the following:
    •   Turbulence   and  diffusion  within  the   planetary
        boundary layer in the meteorological and air quality
        models
    •   Data assimilation
    •   Consistent linkage of the meteorology model with the
        air quality and emissions models
    •   Source  emissions   modeling  including   biogenic,
        wildfire, dust, ammonia,  and  other anthropogenic
        emissions
    •   Gas- and aqueous-phase chemistry
    •   Aerosol chemistry, physics and thermodynamics
    •   Sub-grid parameterization and modeling techniques
    •   Numerical advection and other solution techniques
    •   Code parallelization and efficiency.

Integrating  meteorology and  chemistry  modeling is a new
program priority  to  provide feedback  from air  quality
parameters   (e.g.,  aerosols)  that   affect   meteorological
parameters (e.g., radiation).  Developmental areas are guided
by the model evaluation results and by model sensitivity and

-------
uncertainty tests. New CMAQ model versions are released for
public access roughly on a 1-2 year frequency. Workgroups
have been formed to focus around these research topics:
    •   Atmospheric Chemistry and Aerosols
    •   Two-way     interactive     Meteorology-Chemical
        Transport Modeling
    •   Weather Research and Forecast Model
    •   Air Toxics Modeling

Through the  Model  Evaluation  program  element,  the
Division evaluates the models to characterize the accuracy of
model predictions and to identify  improvements needed in
model processes or model inputs.  This requires comparisons
against observational data. Different CMAQ simulations (e.g.,
different model versions, different  chemical mechanisms,
different vertical layer  structuring)  are compared to identify
the  impact  of model  changes  or  options   on  model
performance. Uncertainties in meteorological predictions and
emission estimates  are considered to  help identify where
improvements are needed. Regulatory Applications of CMAQ
are evaluated by comparing model-predicted changes in ozone
and  aerosols to changes  in emission precursors.    Model
evaluation  is conducted through workgroups dealing with
these issues:
    •   Operational evaluations supporting the CMAQ model
        releases
    •   Model  diagnostics (chemistry, meteorology)
    •   Model   dynamics   (i.e.,  tracking simulated  and
        observed changes in air quality over time)
    •   Probabilistic  evaluation  (exploring  limits to  the
        deterministic use of model predictions)
    •   Spatial  and  temporal  analyses   of  modeled  and
        observed air pollutants

Through these efforts, the Division facilitates the transition of
research to the regulatory community.

Accomplishments
During FY-2006, the Division released several new versions
of the CMAQ model system to the model user community.
CMAQv4.5,  released  in October 2005,  included several
advancements in PM25 modeling capabilities.  New to this
version  of  the  model were  sea-salt aerosol emissions from
wind and wave action, along  with thermodynamic equilibrium
for the phase partitioning of these aerosols in the fine mode (0-
2.5 um diameter).    Figure  2-2  illustrates the treatment  of
paniculate matter in the CMAQ model.  Chemical  reactions
involving chlorine were added to the  gas-phase chemistry of
the CMAQ model as well. This  model release also included a
carbon source apportionment version  of the model,  in which
explicit  tracers  are  added  from various  emissions  source
sectors to track  the incremental contributions of these sectors
to primary carbon aerosol.
CMAQv4.5 was used to simulate a full year (2001) over the
continental U.S. using 36-km grid size in the horizontal and 14
vertical layers extending to 100 mb.  Model  results  for O3
were compared with data from EPA's Air Quality System
network data;  model results for PM25 were compared with
data from several surface-based monitoring networks.

CMAQv4.5.1,  released  in March  2006,  extended  model
capabilities   to   simulate   atmospheric   mercury    (Hg)
concentrations and  deposition.   The  additional  processes
included elemental mercury (Hg°), reactive gaseous mercury
(ROM), and paniculate mercury (Hg(p)) emissions, as well as
the chemical reaction pathways to transform Hg° into ROM.
When deposited in water bodies, ROM produces toxic forms
of methylated  Hg, which can enter the  food  chain through
ingestion by fish.  While the Division had been using research
versions of CMAQ-Hg for several years, this was the first time
these capabilities were included in a public release version of
the model.    The Division  is participating  in the   North
American   Mercury  Model   Intercomparison  Study,   a
collaboration among several groups in the U.S. and Canada, to
compare the results of different atmospheric models for Hg.

CMAQv4.6, released in September 2006, contained several
improvements to the chemistry and turbulent diffusion
modules. The Carbon Bond 2005 (CB05) chemical kinetic
mechanism was added to the model. The new CB05
mechanism, containing 52 species and 156 reactions, provides
an extended inorganic reaction set and better representations
of O3 and PM2 5 precursor species compared with the previous
version. In addition, the latest  data on the reaction efficiency
of the N2O5 hydrolysis reaction was incorporated into CMAQ.
This heterogeneous reaction is  important in the production of
HNO3 and paniculate NO3. The CMAQ model was also
extended to include new hazardous air pollutants (air toxics)
including several toxic metals (beryllium, cadmium, lead,
manganese, nickel, and chromium) and diesel exhaust
components. A new turbulent diffusion module was
developed to include both local and non-local components of
convective turbulence for mixing of pollutants in the planetary
boundary layer. CMAQv4.6 was evaluated by simulating one
month in each season of 2001 on a continental U.S. domain
(36-km grid cells) and nested eastern U.S. domain (12-km grid
cells), using both 14 and 34 vertical layers. Figure 2-3
provides information on July 2001 performance of CMAQ for
PM2 5 components. Note that the results show reasonably
good performance for inorganic species and under predictions
for organic aerosols. Note also that, about 25% of the PM2 5
mass is classified as other (i.e., unknown constituents) in both
observations and model predictions.
In FY 2006, CMAQ model evaluations included more detailed
analyses  of model performance based on different synoptic
weather patterns, chemical mechanisms, vertical resolution,
and  chemical  boundary  conditions.   These  analyses have

-------
shown that chemical boundary conditions, the depth of the
model's first layer, and the representation of clouds in the
model play roles in over predictions of ozone at low observed
concentrations.  More detailed analyses of the contribution of
individual aerosol species to the total PM25  have identified
that the PM "other" category is contributing  substantially to
over  predictions of  PM25  during  the fall  and  winter,
suggesting  uncertainty   in  the   primary PM25 emission
inventory.    Source  apportionment  or process  analysis
diagnostic  methods  have  also   identified  biases  in  the
emissions inventory inputs  to the CMAQ model  for several
primary PM25 sources.

New  advancements in diagnostic evaluation  methods have
also been emerging.  For example, the analysis of CMAQ's
paniculate  NO3  predictions  effectively  informed  model
developers of issues in the chemistry, which were addressed,
in part, in the CMAQv4.6 release. In addition, a  new metric
has been developed to estimate the change in aerosol  NO3
with changes in gaseous SO2 and NH3 emissions in the winter.
The recent NOX emissions reductions from eastern U.S. coal-
fired  power plants  present a unique opportunity to assess
model response to emissions changes.  CMAQ was  used to
apply  these NOX emission  changes to simulate  ambient O3
concentrations.  A new probabilistic model evaluation project
was begun to explore CMAQ model prediction sensitivities to
model physics and chemistry options, and ultimately develop
an ensemble of CMAQ predictions.

Next Steps
Over  the  next  several  years,  science and   technology
advancements planned for the CMAQ model system include
emissions modeling and additional model system evaluation.
These are some of the planned milestones:
FY-2007
    •   Incorporate Weather Research and Forecast (WRF)
        meteorological model into CMAQ modeling system
        as a new meteorological driver
FY-2008:
    •   Release and evaluate new version of CMAQ model
        system that will  include improved simulations  of
        aerosol  processes,  especially  secondary  organic
        aerosol production
    •   Develop    prototype   of    two-way    integrated
        meteorology/chemistry  simulation model based on
        WRF and CMAQ models
FY-2009
    •   Add fugitive wind-blown dust emission module  to
        CMAQ modeling system
Impacts  and  Transition  of  Research   to
Applications
The  Division  releases  versions of the  CMAQ model and
associated programs to the public through the ORD-supported
Community Modeling and Analysis System (CMAS) Center.
The  Center  also provides user support and training.   The
community air quality modeling concept, the CMAQ model in
particular, have seen growing acceptance since the model was
first  released  in 1998.   An annual  CMAQ  model-users
workshop now attracts over 200 people each year from North
America, Europe, and Asia.

EPA's  Office  of  Air  Quality  Planning  and  Standards
(OAQPS) and the states use the CMAQ model for assessments
in national  air  quality rulemaking  and  in  their  State
Implementation Plans (SIPs), respectively.  OAQPS has used
the CMAQ model to assess the potential effectiveness of the
Clean Air Interstate Rule and the Clean Air Mercury Rule as a
part of EPA's rule making process. The states, through their
Regional Planning Organizations, are using the CMAQ model
for visibility assessments in support of the Regional Haze Rule
and for upcoming SIP  assessments for O3 and PM25.   The
CMAQ model  is also being used in Canada, the U.K., Spain,
Eastern European Countries, China, Korea, and many  other
nations   in  programs   to  improve  regional  air  quality
management.    NOAA's National Weather  Service,  in a
collaborative project with EPA, is using the CMAQ model to
make publicly-available  short-term  (next-day) forecasts  of
ozone air quality  across the eastern U.S. (See Chapter 6).

The effects of all of these efforts will be to better inform the
public   on  current air  quality  conditions  (forecasting
applications) to help them make decisions on health-related
exposures to air pollution, and to better inform policy makers
(air quality model assessments) to guide them in the best long-
term emissions control decisions to reduce air pollution.

The  part  of the  Division organizationally associated with
OAQPS oversees and facilitates the process of transitioning
tools to regulatory applications, thus providing the foundation
for scientifically sound regulatory decisions.

-------
Figure 2-1. Schematic of CMAQ modeling system, including meteorology, emissions, and air quality models.
             CMAQ Aerosol  Module
   Alrimodal size distribution
     Gas/particle interactions treated
     for fine modes only
     Fine-modes coagulate
     Coarse mode, fine EC (black) &
   V^other fine PM (brown) are inert
                          SVOCs
                     Aromatics
                         Monoterpenes
                 HNO,
                  H2S04
                                                          HCI
                                                         H2O
       COARSE MODE
2 FINE MODES
Figure 2-2. Schematic of particulate matter/aerosol module in CMAQ model.

-------
          July Average PM2 5 vs  STN
                   STN Stacked Barplot for July 2001
                              CMACM.6
Figure 2-3.  Comparisons of monthly average PM2.5 species components observed at eastern U.S. STN sites with comparable results from
CMAQv4.5 and CMAQv4.6 (from eastern U.S. simulation with 12-km grids).

-------
                                                  Chapter 3
  Evaluating the Impact of Regulatory Policies on Air Quality and  Ecosystems
Introduction
The majority of the criteria pollutants are transported across
state  boundaries,  complicating  the  non-attainment issue.
Recent EPA rulemakings have recognized that this transport
must be considered in meeting NAAQS, requiring a regional
perspective when developing strategies for air pollution non-
attainment.

In 1998, EPA finalized a rule known as the "NOX SIP Call,"
requiring 22 states and the District of Columbia to submit SIPs
that address the regional transport of ground-level ozone.  The
actions directed by these plans include reducing emissions of
nitrogen  oxides (NOX),  a precursor  to  ozone  formation,
thereby decreasing the formation and transport of ozone across
state boundaries.

The recent Clean Air Rules are a suite of actions designed to
improve air quality. Three of the rules specifically address the
transport of pollution across  state borders.   The Clean Air
Interstate  Rule  (CAIR)  will permanently cap emissions of
sulfur dioxide and nitrogen oxides from utilities in the eastern
United States. When fully implemented in 2015, CAIR will
reduce SO2 emissions in these states by over 70 percent and
NOX emissions by over 60 percent from their 2003 levels.  The
Clean Air Mercury Rule (CAMR) will build on the CAIR to
reduce mercury emissions from coal-fired power plants.  The
Non-Road Diesel Rule will reduce emissions from future non-
road diesel engines  by  changing  the  way  diesel  engines
function to remove  emissions and the way diesel  fuel is
refined to remove sulfur.

Deposition of atmospheric nitrogen, sulfur,  and mercury to
land and water surfaces contributes significant loadings to
receiving  water bodies, affecting ecosystems health.   For
example,  atmospheric  deposition  of  nitrogen accounts for
about 30% of the nitrogen coming into the Chesapeake Bay.
CAA  regulations, including  the NOX SIP Call, CAIR,  and
CAMR are expected to reduce atmospheric deposition of these
pollutants.

Research Description
Given the  significant costs associated with these rules  and
control  measures,  it  is  important  to  demonstrate  their
effectiveness.  The Division has demonstrated reductions in
observed and modeled ozone concentrations resulting from
actions  of  the NOX  SIP Call.   Research will  continue to
develop ways to systematically track and periodically assess
our progress in attaining national, state, and local air quality
goals - particularly those related to criteria pollutants regulated
under the NAAQS and the Clean Air Rules.

Research under this Theme area falls into two categories:
    •   Evaluating    changes   in    ambient   pollutant
        concentrations and atmospheric deposition due to the
        implementation of emission reductions
    •   Investigating   relationships   between   emissions,
        ambient pollutant concentrations,  human exposure,
        and human health endpoints.

The  major research  questions addressed  by this  research
include the following:
    •   Did our control  strategies  result in the  anticipated
        emission reductions?
    •   Did our models accurately predict the changes in
        pollutant concentrations  and atmospheric deposition
        due to the control strategies?
    •   What   are   the  human  and   ecosystem   health
        consequences of these reductions?

This research  will  support  the  accountability  program to
develop tools and techniques for assessing the effectiveness of
control  strategies.    The CMAQ model  will be  used to
characterize air quality before and after the implementation of
a target regulation  and to  evaluate  relationships  between
changes  in  emissions  and  pollutant   concentrations  or
atmospheric deposition. Various scenarios will be modeled to
estimate  the  anthropogenic  contribution  to total  ambient
concentrations  and  the impact  of not  promulgating the
regulation.  Methods will also be developed to  differentiate
changes  attributable   to  emission  reductions   from  those
resulting from  other factors, such as weather and annual and
seasonal variations.

Research will initially focus on NOX and SO2 where emissions
monitoring  data are available.  Later, research will investigate
using other sources  of information  (e.g.,  remote  sensing,
surrogate measures) to evaluate pollutants such as paniculate

-------
matter and  mercury  where emissions  data  are  sparse  or
uncertain.

In addition, the relationship between meteorology  and the
regional-scale  transport of pollutants will be investigated.
Specifically, the effect of a target regulation on downwind
concentrations will be assessed.   Trajectory analysis, using
NOAA's  HYSPLIT  model, will be performed to investigate
the transport of primary and secondary pollutants from their
source to downwind  regions,  as illustrated in Figure 3-1.
Source regions  responsible for  atmospheric deposition  to
water bodies downwind  will be  investigated using similar
methods.

Methods  to  statistically combine  modeled and observed data
will be  developed  to improve  the  characterization of air
quality   and  deposition.     These  enriched  air   quality
concentration and deposition maps will  be used to  improve
and  track pollutant control programs and their impact on
ecosystem and human health. The enriched surface maps will
also be used with exposure models to estimate the probability
that a population will be exposed to an atmospheric pollutant.

Accomplishments
In FY 2006, substantial progress  was made  in comparing the
ozone levels before and after the implementation of  the NOX
SIP Call  (see Figure 3-2 for example).  The analysis of NOX
emissions data  from Electric  Generating Units  (EGUs)
indicated that utility NOX  emissions at both the source and at
downwind monitors were reduced substantially by May 2004
because of the implementation of the NOX SIP Call.

The  influence  of meteorology was  assessed by  analyzing
ozone and  meteorological data collected at the  CASTNET
sites, a national monitoring network for data on dry acidic
deposition and rural, ground-level ozone, and controlling for
meteorology in CMAQ model runs.  In addition to  reduced
NOX emissions, the changes in the meteorologically-adjusted
ozone concentrations between the pre- and post- NOX  SIP Call
periods indicated that the NOX SIP Call resulted in a reduction
to the secondary formation of ozone at sites downwind from
the reduced  emissions.   The  results from the  trajectory
analysis supported this potential  source-receptor relationship
and revealed that NOX and ozone  can be transported hundreds
of kilometers from their  sources aloft via  the nocturnal jet
stream.   The  results  of this investigation  indicated that
emission controls on EGUs in  the Midwest have contributed
toward the improvement  of ozone air quality in downwind
regions,  especially  east  and northeast  of the  Ohio  River
Valley.

Next Steps
Research conducted  under this  Theme  Area will  evaluate
changes in pollutant concentrations resulting from regulatory
actions  and  investigate relationships  among  sources  of
emissions, pollutant concentrations, atmospheric deposition,
and  human  and  ecosystem health.   The  following  major
milestones are planned:

FY-2008
    •   Develop methods to quantify the impact of the NOX
        SIP  Call on ambient  ozone  concentrations and
        atmospheric  transport  of   pollutants,   including
        impacts of not implementing  the regulation and
        quantifying the anthropogenic contribution.
FY-2009
    •   Develop methods to quantify the probability of ozone
        exposure above exceedance  levels to  populations
        before and after the NOX SIP call was implemented.
    •   Conduct a prototype risk assessment to  examine the
        health impact of simulated emission scenarios.
FY-2010
    •   Develop approaches for characterizing the magnitude
        of changes in hospital admissions in New York State
        resulting from the NOX SIP Call.
FY-2012
    •   Apply  prototype  ambient concentration  tracking
        method to evaluate impact of the CAIR on ambient
        and deposition concentrations.
    •   Apply  prototype deposition  approach  to  evaluate
        impact of CAIR on ecological exposure  endpoints in
        major water bodies.

Impacts   and  Transition  of  Research  to
Applications
Quantifying  the improvement in air quality and human and
ecological health brought about by costly regulations  is critical
in evaluating whether these  actions  are making the difference
originally anticipated.  This research will evaluate the impact
and  effectiveness of  specific regulatory  actions.   Methods
developed for these evaluations will also provide  a framework
for assessing future regulatory actions.  These methods will
include
    •   data combination techniques
    •   model  evaluations for  different  regulatory and
        emission scenarios
    •   approaches for  tracking  trends embedded  within
        spatial  and  temporal  signals  and confounded  by
        factors such as meteorology
    •   evaluation of the impacts of regulatory actions  on
        human and ecological exposure and health.

This  effort   transitions   research   to   applications   by
demonstrating the use of  CMAQ, HYSPLIT,  and various
statistical techniques to evaluate the  impact  of regulations
implemented to  improve air quality.
                                                       10

-------
                           Figure 3-1.   Back trajectories show Ohio River Valley as source
                           region for high ozone levels at a site in the northeast (green
                           trajectories indicate source regions of low ozone days and black
                           trajectories indicate source regions of high ozone days) during the
                           2002 summer.
ppbV
ppbV
  Figure 3-2.  NOX SIP Call evaluation showing daily maximum 8-hr ozone concentrations at 95th percentile for (a) summer 2002,
  and (b) summer 2004.
                                                        11

-------
                                                   Chapter 4
                               Linking  Sources to  Human Exposure
Introduction
The Clean Air Act requires EPA to assess which hazardous air
pollutants pose the greatest risk to  humans in the  United
States, and to  develop  strategies for  controlling  harmful
concentrations  of these  compounds.   These  assessments
typically   involve  the   application   of  different   models
depending on program objectives - national, regional, urban,
or locale scale  (Figure 4-1).  Performing  these assessments
requires  a link between ambient air quality  and  human
exposure models.  The Division conducts research to build this
link by combining the features  of grid-based, regional-scale,
chemical transport models and urban-scale, dispersion models.
This  research  facilitates the  use  of air quality  model
concentrations in  human exposure models,  which historically
have relied upon monitored concentrations at a central site.

For exposure assessments, air quality modeling should include
local-scale features, long-range transport, photochemistry, and
deposition to provide the  best estimates of air concentrations.
Generally speaking, there are two major types of air quality
models: source-based gaussian  dispersion  models and  grid-
based chemical  transport models. Chemical transport models,
such  as   the  CMAQ model,   can  provide  estimates  of
photochemically formed  pollutants typically at  12-km grid
dimensions, but  not  local-level details.   CMAQ provides
volume-average concentration values for each grid cell in the
modeling  domain for given   conditions.    Emissions are
assumed to be instantaneously well-mixed within the grid cell
in which they are emitted.  While grid-based models are the
platform  of choice for this simulation of chemically-reactive
airborne pollutants, there  are various dispersion models (such
as AERMOD2)  that have  been developed to simulate the fate
of airborne pollutants that are relatively chemically inert.
Research Description
To  incorporate  the  salient  features  of both modeling
approaches,  the Division has been testing a hybrid approach
that combines results from a regional grid model with a local
plume model.  The regional grid model provides the  regional
background  concentrations  and urban-scale photochemistry,
and  the  local  plume  dispersion  model  provides  the  air
concentrations due to local emission sources.  The results of
  Cimorelli, A.J., S.G. Perry, A. Venkatram, J.C. Weil, R.J. Paine, R.B.
Wilson, R.F. Lee, W.D. Peters, and R.W. Erode. AERMOD: A Dispersion
Model for Industrial Source Applications. Part I: General Model Formulation
and Boundary Layer Characterization. Journal of Applied Meteorology, 44,
682-693 (2005).
both model simulations are combined to provide the total
ambient air concentrations for use in exposure models. The
advantage  of using  this  modeling  approach  is that  it
incorporates the spatial and temporal variation of air pollution
within a study area  in lieu of dense  ambient monitoring
networks. This hybrid approach is currently being explored in
several studies, including the air quality and exposure study in
Detroit and the accountability study in New Haven, CT.

The goal of this research theme is to reduce uncertainties in
quantifying the link between sources of atmospheric pollution
and human exposure.  The  Division's work  in this theme is
broken into the following research tasks:
    •   Multi-scale modeling of toxic air pollutants
    •   Near-roadway modeling
    •   Homeland security support

Accomplishments
The CMAQ modeling system has been modified to include
HAPS, and its results have been coupled with the near-field
dispersion  model  AERMOD  to  account  for  urban-scale
gradients of air toxics. In addition, outputs from this coupled
system have been successfully linked to the Stochastic Human
Exposure and Dose Simulation (SHEDS) exposure model and
the Hazardous Air Pollutant Exposure Model (HAPEM). This
research has been performed in collaboration with scientists
from NERL's Human Exposure and  Atmospheric Sciences
Division (HEASD) and OAR's Office of Air Quality Planning
and Standards (OAQPS).

During FY-2006,  the Division  embarked upon the  Near-
Roadway and School Infiltration Research  Initiative.  The
overall goal of this EPA ORD-sponsored effort is to examine
the contribution  of  roadway  air  pollutants  to  sensitive
populations living near roadways.  As part of this  initiative,
the Division started a  numerical and physical modeling study
to examine the  impact of  typical road  configurations on
downwind  concentration patterns.  The road configurations
being studied include  noise barriers, road  cuts, and elevated
highways.    This  study  was   motivated  by  a   lack  of
parameterizations in current roadway dispersion models.  To
complement work in the meteorological  wind  tunnel,  the
Quick  Urban  Industrial Complex  (QUIC) model is  being
applied to help in developing parameterizations and to explore
field monitoring in Raleigh, NC,  and Las Vegas, NV.

Because  of  a decrease in  funding, research related  to
Homeland Security received less attention in FY-2006 than in
previous years. A 1:400 scale model of midtown Manhattan
has been constructed for insertion in the meteorological wind
tunnel, when and if resources allow.
                                                       12

-------
Next Steps
During the next few years, the Division is expected to build in
the areas of near-roadway modeling and linkage of air quality
models with human exposure models to assess human health.
Planned milestones include the following:

FY-2008
    •   Characterization of near roadway dispersion
FY-2009
    •   CMAQ  model   system  release  and evaluation,
        including   concurrent  multi-pollutant   modeling
        capability (O3, PM, air toxics, Hg)
FY-2010
    •   Development of line source algorithms for near-field
        and hybrid models
       2
        Improved CMAQ :
        scale applications.
FY-2012
    •   Improved CMAQ modeling system for use in urban-
Impacts  and   Transition  of  Research   to
Applications
The Division conducts research to link ambient air quality and
human exposure models. Application of these linked models
helps  policy-makers to develop control strategies targeting
those hazardous air pollutants identified as posing the greatest
risk to humans.
                                                                    Regional scale
                                     Figure 4-1. Multiple scales in air quality modeling.
                                                      13

-------
                                                  Chapter 5
                            Linking Sources to Ecosystem Exposure
Introduction
Ecosystems provide resources and services that contribute to
our social  and economic welfare.   A long-term goal  of
environmental  management   is  to   achieve   sustainable
ecological resources through a comprehensive assessment of
current and projected ecosystem health.  Such an assessment
must include identification of the major threats (in the form of
specific stressors) to ecosystem health, the source of those
stressors, and how they move through the environment.  This
is fundamentally a problem of multimedia pollution.

The  overall  objective  of this  work  is  to  develop  the
atmospheric  components  of multimedia  modeling  and
assessment tools to allow better management and protection of
ecosystems and their associated resources and services.  The
Division is developing a suite of linked models, tools, and
technology to provide long-range  ecological forecasts and a
scientific  basis  for  decision-making   to  protect  aquatic
ecosystems.     This   research  supports  EPA's  expanded
definition of air quality management that includes ecosystem
protection  in  regulatory  assessments  of  air pollution
regulations,  i.e.,  setting  of secondary  NAAQS.   It  also
supports EPA's renewed emphasis on linking  sources  to
exposure  in  a  multi-pollutant  context   and   developing
capabilities for ecosystem risk assessment.

The interaction between the atmosphere and the underlying
surface is increasingly being recognized as an important factor
in multimedia issues. Atmospheric deposition is an important
source of ecosystem  stressors,  in particular for acidification,
eutrophication of coastal estuaries due to excess nitrogen, and
bioaccumulation of mercury.  Critical load is the amount of
deposition above which natural resources can be negatively
affected  and is  intended as a protective  threshold.   The
National Academy of Sciences (NAS) has recommended that
EPA  consider a  critical  load  approach  to  ecosystem
management.3    In  support of  this  recommendation,  the
Division conducts research to provide the most accurate
atmospheric deposition estimates possible.

The Clean Water Act administered by the EPA requires states
to develop  Total Maximum Daily Load limits (TMDLs), the
maximum amount of a pollutant that a body  of  water  can
receive while still meeting water quality standards.  While the
atmosphere is an important contributor to stressors  such as
excess nutrients, atmospheric deposition is seldom considered
in the development of TMDLs. The Division's research has
been  improving  our  understanding of  the  atmospheric
contribution of stressors to TMDLs.

Research Description
For this research theme, the Division has identified research
areas  that  have  the  greatest potential  to  reduce  critical
uncertainties  in  atmospheric  deposition,  assess  program
accountability, and link atmospheric deposition to  ecosystem
resources and services.

Specific research tasks are grouped under one of the following
research program elements:
    •   Air-Surface Research and Development
    •   Multimedia Applications
    •   Multimedia Tool Development

Through the  Air-Surface  Research  and  Development
program element, the Division develops  and advances  air-
surface  exchange  modules for  CMAQ  and advances  the
linkage  between  CMAQ  and  the underlying  land-use
categories to  facilitate improved interactions with  ecosystem
models.  The Division also develops and advances air-surface
exchange modules for monitoring network operations using an
inferential method for dry deposition, focusing primarily  on
sulfur, nitrogen, and  mercury species.   Bi-directional  air-
surface  exchange process is a new feature of this program
element.
 Committee on Air Quality Management in the United States, National
Research council. 2004. Air Quality Management in the United States.
Washington, DC: National Academy of Sciences.
Focus  areas  of Air-Surface Research and Development
include the following:
    •   Dry deposition of fine particles
                                                       14

-------
        Uni-directional deposition of gases
        Bi-directional   flux   (air-surface   exchange)   of
        ammonia
        Bi-directional flux of mercury
        Land-surface  interface within  the CMAQ system to
        support bi-directional fluxes
        Land-use specific flux determination by  CMAQ for
        linkage with ecosystem models
        Dry  deposition and  bi-directional  flux  module
        adaptations for network operations
Through the Multimedia Applications program element, the
Division develops and improves  linkages between  air and
water models  and connections  to ecosystem resources and
services through  participation with partners  in multimedia
assessments. National coverage of deposition estimates is an
important output for these efforts (see Figure 5-1).

Focus  areas  of  Multimedia  Applications  include  the
following:
    •   Chesapeake Bay 2007/2008 Re-evaluation and 2010
        TMDL assessment
    •   Tampa Bay assessment
    •   Coastal air-water  model  linkage  development to
        address water quality issues
    •   Gulf of Mexico studies

Through  the   Multimedia  Tool  Development  program
element,   the   Division  develops  tools  for  specialized
multimedia analyses and applications involving atmospheric
models. The need for specialized tools is especially pertinent
to bringing atmospheric components together with watershed
components for multimedia management analyses.  Most off-
the-shelf tools do  not   address  the  specialized  needs or
applications encountered in analyzing data from a multimedia
perspective. Significant  effort  is often required  to  analyze
observations and model  results  and  provide them in a form
required to support management decisions.

Focus  areas of multimedia tool development include  the
following:
    •   Allocation  of  spatial  data to  a   CMAQ-useable
        gridded form
    •   Watershed deposition tool to overlay gridded CMAQ
        output onto  a  selected set of watershed segment
        polygons
    •   Updating CMAQ visualization tools to be based on
        Java

Accomplishments
The  Division   collaborated  with  Canadian  colleagues to
compare their  respective models that estimate dry deposition
for network operations, the Routine Deposition Model (RDM)
for  Canada and the Multi-Layer Model (MLM)  for EPA's
Clean Air Status and Trends Network (CASTNET). Required
input data for each  model  were  measured  at the  same
monitoring site in Canada.  These measured  concentrations
agreed quite well with each other.  However, there were large
differences in the deposition velocities calculated by MLM
and  RDM  due  to  different  assumptions about how  to
parameterize the dry deposition velocities.  These differences
are now being investigated.

An evaluation of the MLM for estimating dry deposition used
in CASTNET pointed to areas for model improvement.   In
response, the Division developed the Multilayer Biochemical
Model (MLBC) as a replacement for the MLM mode, and
made progress towards implementing the MLBC for network
operations.

The  Division partnered  with the  Chesapeake Bay Program
Office to  provide a series  of  CMAQ estimates of future
atmospheric  nitrogen deposition out  to  2020  simulating
growth and implementation of new air regulations. The new
regulations include the Clean Air Interstate Rule (CAIR) the
Clean Air Mercury Rule (CAMR) and the Clean Air Visibility
Rule (CAVR).  Figure 5-1 shows the 2001 base-case nitrogen
deposition against which the future scenarios are compared. A
significant decrease in nitrogen deposition from NOX emission
reductions is expected, but the growth  in ammonia emissions
erodes these benefits.

The Division used CMAQ to  estimate the relative contribution
of NOX emissions from mobile sources,  power plants, and
industry to nitrogen  deposition  in   the  Chesapeake  Bay
watershed.  The Division also investigated uncertainties in the
CMAQ model for estimating  dry deposition of nitrogen to the
Chesapeake  Bay  watershed,  specifically  examining  the
uncertainty in the efficiency  of the N2O5 hydrolysis reaction
that produces nitric acid and uncertainty in the  deposition rate
for ammonia. After reviewing the results, the uncertainties in
the dry deposition estimates provided to the Chesapeake Bay
watershed   modeling  team  were deemed  to  be  within
acceptable bounds. An analysis of ammonia sources and sinks
with CMAQ showed  that the  uncertainty in ammonia  dry
deposition rate can significantly affect the area  of influence of
a region of high ammonia emissions.

The  Division completed the evaluation of CMAQ-UCD, a
sectional  version  of CMAQ with code developed  at  the
University of California, Davis (UCD) that incorporates  sea
salt influences.  Model estimates compared well with the Bay
Regional Air Chemistry Experiment (BRACE) aircraft data.
The finding that almost half the total nitrate budget in  Tampa
Bay is associated with coarse  particle sea salt also agreed with
the observations.   These comparisons set  the stage for  the
Tampa Bay assessment to be completed in FY 2007.

The Watershed Deposition Tool (WDT) is designed to allow
users to read seasonally- or annually-averaged CMAQ  files in
native format, and calculate a weighted-average deposition or
change in  deposition for selected watershed hydrologic units.
The  Division made improvements to  the WDT,  adding  the
                                                       15

-------
capability to export GIS Shape files and to continue from the
point of exit from a previous work session.  The revised WDT
received favorable reviews.  Public release of the revised
WDT is planned for spring 2007.

Next Steps
Over the next several years, advancements are planned for the
multi-media theme area to investigate more  sophisticated
futures  scenarios for air-water  linkages and  to  adapt the
CMAQ modeling system, to calculate bi-directional exchange
of ammonia and mercury  and  to more closely  couple  to
ecosystems models. Some of the planned milestones are:

FY-2007
    •   Release of MLBCNet to the public, coordinated by
        EPA's Clean Air Markets Division (CAMD) of the
        Office of Air Programs
    •   Additional Chesapeake Bay scenarios commissioned
        by  the  Bay  Program.    Source   responsibility
        calculations re-evaluated
    •   Completion  of the Tampa Bay Assessment for the
        Tampa Bay National Estuary Program
    •   Bi-directional NH3 flux algorithms incorporated into
        CMAQ
    •   Release of the Watershed  Deposition Tool to the
        public
    •   Spatial Allocator configured to grid the new National
        Land Cover Data (NLCD) to CMAQ grids
FY-2008
    •   Chesapeake Bay futures scenarios simulated with 12-
        km grid cell sizes for the eastern US
    •   Bi-directional NH3 flux version of CMAQ run for
        Chesapeake Bay sensitivity
    •   New  mosaic  land-use   interface  incorporated  in
        CMAQ for  better communication with  ecosystem
        models
    •   Bi-directional Hg flux paradigm defined
FY-2009
    •   Chesapeake  Bay   scenarios  run with mercury  in
        addition to sulfur and nitrogen
    •   Advanced land-surface layer to support bi-directional
        flux calculations incorporated in a science version of
        CMAQ
    •   Preliminary  regional air-water model  linkage  pilot
        study completed for nitrogen and mercury

Impacts  and  Transition  of  Research  to
Applications
The  Clean  Air Status  and Trends Network (CASTNET)
monitors concentration and dry deposition at sites across the
country  to  assess long-term trends  in  air  quality,  dry
deposition,   and environmental  protection  resulting  from
regulatory policies and emission reductions required under the
Clean Air Act. CASTNET is considered the primary source
for estimates  of dry  acidic deposition  and  is vital to the
Agency's  efforts in the protection of terrestrial and aquatic
ecosystems.   The  Division's development of an improved
model  (MLBC) for  dry  deposition  estimates  is  a key
component of CASTNET's success.

The major connection between the atmosphere and ecosystems
is  through air-surface exchange, which includes deposition,
and for some  pollutants  also includes a bi-directional flux.
Significant ecosystem stressors that  result from air-surface
exchange include acidifying deposition of nitrogen and sulfur,
neutralizing  deposition  of base  cations,  and  eutrophying
deposition of reduced and oxidized nitrogen.  EPA program
offices such  as Office of Water and Office  of Air and
Radiation  and  states use  this information to  support their
policy  decisions affecting TMDLs, atmospheric  emissions,
and coastal management.

Estimates  of the expected changes  in atmospheric deposition
to  the  Chesapeake  Bay watershed  contribute  significant
information  on nitrogen  loading that  is  used  by  the
Chesapeake Bay Program to manage the  Chesapeake Bay.
This supports the Chesapeake Bay Program's commitment to
reducing nitrogen loads in the Chesapeake Bay by 2010 with
the help of reductions in atmospheric deposition.  In addition,
this  work provides  an  important  test  bed  for linking
atmospheric models with watershed models and is a flagship
of multimedia planning and benefits assessment for a coastal
estuary.

Air deposition reductions are a key element of the Tampa Bay
TMDL implementation strategy required by the  Clean  Water
Act. This  work will significantly reduce the uncertainty in the
estimates of nitrogen loading due to atmospheric deposition to
Tampa Bay watershed basins and bay  segments used  in the
Tampa Bay  TMDL.  The model-estimated effect  of  court-
ordered nitrogen oxide  (NOX) emissions reductions from two
electric  generating plants adjacent to the  bay  will provide
Tampa the best estimate  of nitrogen deposition reductions
across the bay and the  watershed attributable to known NOX
emission reductions expected to occur by 2010.   The model-
estimated  effects of deposition reductions  due to the  recent
clean air rules will assess whether these rules are keeping up
with or out-pacing the effects of growth.

Addressing multimedia  issues often requires working with
multiple types of models and data sets.  Proper software tools
allow environmental scientists and managers to perform their
work with less effort and allow them to develop insights that
they might have missed.  The software tools developed by this
project are for  community use, but will allow EPA and the
states to conduct their work more effectively and efficiently
and provide for a more complete multimedia approach.  These
tools will allow new users to be able to take advantage  of the
results of the more advanced air quality models for multimedia
applications.    The tools will also  allow  ecosystem and
watershed managers to  take  atmospheric deposition into
account in their planning.
                                                       16

-------
       20.00112
       15.00
       12.50
       10.00
        7.50
        5.00
        2.50
  0.00
kg/ha
 PWE
                                CMAQ Air Quality Model
                        Continental Coverage at 36 km x 36 km
                                                                                    148
             2001  Emissions: Annual Total Deposition of Nitrogen (kg-N/ha)
Figure 5-1. CMAQ annual average (wet plus dry and oxidized plus reduced) nitrogen deposition (in kg-N/ha) across the U.S. based on 3 years of
differing meteorology - one dry, one wet, and one average precipitation year - across the Eastern U.S.
                                             17

-------
                                                  Chapter 6
            Providing Air Quality Forecast Guidance for Health Advisories
Introduction
An increasing number of clinical and epidemiological studies
have  associated adverse  health  effects  in  humans  with
exposure to ambient O3 and fine paniculate matter (particles
with diameter less than 2.5 um, also called PM2 5). As a result,
local  air quality  agencies  need  accurate  forecasts  of
atmospheric  pollutant concentrations  to alert the sensitive
populations on the onset, severity,  and duration of unhealthy
air, and  to  encourage the public and industry  to  reduce
emissions-producing activities.  The ability to forecast  local
and regional  air pollution events is  challenging since the
processes  governing  the production  and  accumulation of
ozone and fine paniculate matter are complex and  non-linear.
Comprehensive atmospheric models provide a scientifically-
sound tool for providing air quality forecast guidance. These
models  represent as  much detail  as  possible the various
dynamical, physical,  and chemical processes regulating the
atmospheric transport and  fate of pollutants.  The Division
develops, applies, evaluates, and improves  such  models to
provide robust tools to forecast the day-to-day variability in air
pollutant concentrations. The  principal modeling platform is
the CMAQ modeling  system linked with the North American
Mesoscale (NAM) model, NOAA/National Weather Service's
operational weather prediction model.

Research Description
In 2003,  EPA  and  NOAA  signed   a  Memorandum  of
Agreement to collaborate on the design and implementation of
a  system  to  produce  daily  air  quality modeling  forecast
information.    The Division has  linked together NOAA's
operational NAM-meteorological  model and  EPA's CMAQ
model  to form  the  core of  this forecast  system.   The
preliminary system provided ground-level ozone predictions
over the  Northeastern United  States.   Through an on-going
collaborative program of phased development and testing with
the National Weather Service, the  Division is expanding the
system's capability.   As of August 31, 2005, the operational
domain was extended over the entire eastern United States. In
2006, the  domain coverage for experimental O3 predictions
was expanded  to cover the entire continental United States
(figure 6-1), and the Division began developmental testing for
PM25 forecasts over the continental United States.  Over the
next few years, the Division will expand the operational model
domain to the continental U.S., and will add PM25 to the
model  forecast capability.  The Division has already begun
developmental testing of both of these capabilities.

NOAA is supporting the basic infrastructure for air quality
forecasting,  with  NOAA-EPA/AMD  personnel  providing
much of that support.  The Division
    •   Contributes  to  the  CMAQ model improvements
        through comprehensive diagnostic analyses of model
        forecasts
    •   Builds an  air quality forecast database at EPA/RTP
        consisting  of the daily meteorological, emissions, and
        air quality outputs from the NAM-CMAQ forecast
        system
    •   Improves  the  accuracy   of  predicted  pollutant
        distributions through development and application of
        bias-adjustment methods to correct model errors in
        forecasts either in real-time or in post-process
    •   Makes  these  data  available  to  the  air  quality
        management community and the general public
    •   Provides value-added analyses of the data contained
        in this  long-term  database (e.g., reanalysis or data
        fusion with observations to create long-term archive
        of ambient air quality and deposition  surfaces for
        linkage with exposure  studies, analysis of long-term
        spatial and temporal trends in ambient air quality and
        deposition, exploring  relationships  between ambient
        concentrations and meteorological conditions).

Accomplishments
During FY-2006, several major changes were implemented in
the air quality forecast modeling system:

    •   In 2006, the Eta model was replaced by the Weather
        Research and Forecasting Non-hydrostatic Mesoscale
        Model  (WRF-NMM)  as   the  operational North
        American  Mesoscale  meteorological  model.   To
        reflect this change, modifications were introduced in
        the air quality forecast system to link CMAQ with the
        new version of the NAM.
                                                      18

-------
    •   Since the coordinate systems used in the WRF-NMM
        are different from those used in CMAQ, the initial
        linkage   between   the   models  was  based  on
        interpolation of meteorological data from the WRF-
        NMM coordinate structure to that used in CMAQ - a
        method known as "loose coupling." To reduce errors
        associated with this loose coupling,  the interface
        between  the  WRF-NMM model  and  CMAQ was
        modified so that the two models would use the same
        vertical  coordinate  systems for their  calculations.
        The  updated  system  provides  a  more accurate
        representation  of   the   3-dimensional   (3-D)
        meteorological fields.  Efforts are underway to also
        include consistent coupling between the horizontal
        coordinate and grid system between the two models.

    •   The  emission inventories used  by the Air Quality
        Forecast  system were updated to represent the 2006
        conditions.  Continuous Emission Monitoring (CEM)
        data from 2004 were used to generate a base year of
        emission estimates for NOX and SO2  from Electric
        Generating Units.   For  other pollutants and non-
        Electric Generating Units, base year 2001 emissions
        were used.  Annual Energy Outlook data from the
        Department of Energy  was used to project energy-
        related emissions  from  the base  year to  2006.
        Vehicle Miles Traveled projected out to 2006, along
        with updated 2006  fleet  information,  were used to
        estimate  mobile source emissions.  The emissions
        inventory was also augmented with updated emission
        information from some states.

    •   Diagnostic tracers were added to CMAQ to track and
        quantify the influence of lateral boundary conditions
        specified for  O3.   Analysis  of  simulated tracer
        distributions  indicated  that  the  simulated surface-
        level background O3 is highly dependent on lateral
        boundary conditions specified in the free troposphere.
        Additional analyses of the 3-D  O3 and diagnostic
        tracer    fields   with   extensive    ozonesonde
        measurements from the  2006 INTEX Ozonesonde
        Network  Study are underway.

Extensive evaluation of archived  forecasts results from the
summer of 2004  were also  conducted through comparisons
with a variety of measurements from surface sites as well as
aircraft deployed during the 2004 International Consortium for
Atmospheric Research on Transport and Transformation field
study.

Continuous evaluation of paniculate  matter forecasts results
from the developmental simulations was  performed through
detailed comparisons  with measurements from a variety  of
surface  networks.  Performance characteristics  for PM25
forecast over an entire year were investigated with emphasis
on understanding  seasonal biases.  A detailed comparison of
PM25   and  constituent   concentrations  forecasts  with
measurements from different surface networks was conducted
to characterize model performance during the winter-time.

The Division developed and tested a method to characterize
real-time emissions from wildfires using satellite information
from the Hazard Mapping  System to detect the  location of
fires.  The Division also developed a method to estimate the
emissions of gaseous and paniculate matter constituents from
these fires for input  to CMAQ.  Initial testing indicates the
new wildfire  estimates improved CMAQ model performance
for both O3 and PM2 5 in regions impacted by pollution plumes
from the fires.

Next  Steps
FY-2007
    •   Continue populating the air quality data archive at
        EPA/RTP  with WRF-NMM-CMAQ daily air quality
        forecasts and meteorological data for 2007
    •   Conduct   initial  testing  of  WRF-NMM-CMAQ
        linkage on the native WRF model E-Grid structure
    •   Development and evaluation of post-processing bias-
        adjustment techniques to achieve  improved model
        forecasts
FY-2008
    •   Analysis   and  evaluation  of  developmental  PM
        forecast simulations over  the  Continental United
        States
FY-2009
    •   Experimental   testing  of   daily   PM   forecast
        simulations (with NOAA/National  Weather Service)
    •   Improved  methods  to   specify  lateral  chemical
        boundary conditions for forecast applications through
        linkage with global models

Impacts   and    Transition   of  Research  to
Applications
Since early  2003,  the  Division  has  worked with NOAA's
National Weather  Service  to develop and deploy a model-
based national air  quality forecast guidance system, which
currently operates at the National Weather  Service.  Hourly
ozone forecasts through midnight of the following day are
available online, providing information on the onset, severity,
and duration of poor air quality to  more than 290 million
people   across the country.   Local  and  state  air quality
forecasters use this  tool to create daily air quality outlooks and
issue air quality alerts, using EPA's health-based Air Quality
Index.

Analysis of model forecasts of air quality will allow EPA and
NOAA researchers to continuously assess and improve model
performance.  Forecast guidance products have also been used
for in-field guidance for flight planning during  specialized
field campaigns such as the 2004 International Consortium for
Atmospheric  Transport  and  Transformation and the  2006
Texas Air Quality  Study.  Detailed post-mission  analyses of
model  forecast results with extensive  measurements from
                                                       19

-------
these  field  campaigns  have  also  provided  diagnostic    be used for to understand long-term trends in air quality, the
information on model performance, helping  improve  the
science in CMAQ.

EPA's archive  of the forecast  products  provides a  rich
repository of daily air quality information that can potentially
effectiveness  of emission control  programs  in  reducing
population exposure,  and relationships between air  pollution
and human health.
                       Figure 6-1. Forecast surface-level 8-hour maximum O3 concentrations on August 1, 2006.
                                                         20

-------
                                                  Chapter 7
   Understanding the Relationships between Climate Change and Air Quality
Introduction
It is well-known that meteorology has a strong influence on
ozone and aerosol variability, both spatially and temporally.
Meteorology  over  many  decades  includes  variations  on
synoptic, seasonal, and interannual time scales. In addition to
the  long-term, interannual variability,  research suggests  the
presence of an increasing trend in temperature over the past
century  and this trend is projected to continue into the future.
It is important to understand potential impacts from climate
change on air quality compared with projected improvements
in air quality stemming from regulatory programs.  In addition
to understanding the responses  of  air quality to potential
climate change, the air quality influences on climate must also
be understood.   For example, sulfate aerosols can have a
cooling  effect on the atmosphere through radiation scattering;
thus, emission controls resulting in  substantial decreases in
sulfate concentrations are likely  to affect  climate  change.
Using modeling tools  that can  simulate these  interactions
between climate and air quality, key  goals of this theme area
are to improve our understanding of the impacts of changing
climate  in the future for air quality and to identify potential
influences on climate from major changes in aerosol loadings.

Research Description
The  focus of the Climate Impacts on Regional Air Quality
(CIRAQ) project is characterizing potential effects of climate
change on regional air quality between now and 2050. The
results from the CIRAQ project have been generated using a
coupled global-to-regional downscaled modeling  approach.
Modeling results  suggest that  a  mid-range climate scenario
fifty years into the future could introduce a moderate increase
in ozone and a  decrease in aerosols in the  Eastern United
States; however,  future  emission scenarios would introduce a
much larger difference that has an uncertain direction in both
magnitude and direction.  The CIRAQ project will investigate
future  emission  scenarios  and  test  model  sensitivity  to
estimate the range of emissions and  the resulting impacts on
air quality.  The results from the first series of simulations will
contribute  to  the  2007  U.S.  EPA  national  air  quality
assessment report; the emission scenario tests will contribute
to the 2010 EPA  national  air  quality assessment report.
Results  of  CIRAQ  will support two  of the  Synthesis and
Assessment reports planned for the Climate Change  Science
Program (CCSP), a multi-agency program aimed at improving
our understanding of the science of climate change and its
potential impacts.

In addition to the series of simulations and analyses developed
under  the  current  CIRAQ  project,  future  research plans
include additional  downscaled regional climate simulations
using the  NOAA Geophysical  Fluid Dynamics Laboratory
(GFDL) global scale  models.  GFDLs global models are
regularly  scientifically  updated,  and  together with  the
Division's regional-scale models would provide an advanced
global  to  regional  scale modeling  tool  for this research.
Preliminary  linkages and  tests  are  underway,  and current
planning under the NOAA air quality and climate programs
may provide additional support for this effort.

The Weather, Research and Forecasting (WRF) model, a new
generation mesoscale weather model, will be used to produce
meteorology for CMAQ air quality simulations. The WRF-
CMAQ model  will provide direct feedbacks from aerosols in
CMAQ to radiation predictions in WRF.  The  Division will
use this integrated modeling tool  to conduct sensitivity
simulations  to evaluate  the  potential  impact of future  air
quality programs on regional climate.   For example, large-
scale reductions in sulfate concentrations  may  contribute to
warming in the United States.

Accomplishments
During the next three years, the CIRAQ project members have
collaborated with  Pacific Northwest  National Laboratory
(PNNL) and Harvard  University to  develop and evaluate a
series of 10 years  of current and  10 years  of future  (2050)
down-scaled regional climate simulations.  Dr. Ruby  Lueng
(PNNL) led the  effort to  generate the downscaled climate
scenarios.

Approximately four terabytes of regional climate model output
(i.e., a large volume of data) was transferred  and  archived
within  the Division.

A series of scientific papers has been prepared by the Division
to evaluate  these simulations for current time periods  and
                                                      21

-------
characterize the differences from the current to  future year
predictions.

During 2006,  5 years of current and 5 years of future (2050)
air quality simulations were developed using these  downscaled
regional climate simulations.

Next Steps
FY-2008
    •   Development  of  air quality emission scenarios for
        2050 time period (in collaboration with the National
        Risk Management Research Laboratory)
FY-2009
    •   Completion of 5  years of CMAQ simulations with
        future emission scenarios
FY-2010
    •   Development of manuscript and written contributions
        to the 2010 national air quality assessment report (led
        by  EPA's   National  Center  for  Environmental
        Assessment)
FY-2011
    •   Test linkages with the GFDL  global-scale climate
        and chemical transport models.

Impacts  and   Transition   of  Research  to
Applications
Air quality planning procedures rely on present meteorological
conditions when developing future emission control strategies.
The research conducted under this theme area will help for
future years identify the uncertainty  introduced when future
climate influences are not included in the analysis. Modeling
tools  including WRF-CMAQ  and  global model linkages
developed in this research will be made available for use in air
quality management to consider climate variability and trends.
Sensitivity studies will provide an additional assessment of the
role of short-lived pollutants on the radiative budget.
                                                      22

-------
                                            Appendix A
                                      Division Staff Roster
Office of the Director
S. T. Rao, Director
Patricia McGhee, Assistant to the Director
Veronica Freeman-Green, Secretary
Sherry Brown, Support Specialist
Val Garcia, Deputy Director
Linda Green, Budget Analyst
John Irwin (contractor)
David Mobley (EPA), Associate Director
Bill Peterson (contractor)
Dev Roy, (EPA) Post-Doc
Jeff West, QA Manager

Atmospheric Model Development Branch
Ken Schere, Chief
Shirley Long (SEEP), Secretary
Prakash Bhave
Russ Bullock
Simon Clegg (visiting scientist)
Rob Gilliam
Jim Godowitch
Alan Huber
Bill Hutzell (EPA)
Deborah Luecken (EPA)
Tanya Otte
Jon Pleim
Adam Reff (EPA), Post-Doc
Shawn Roselle
Golam Sarwar (EPA)
John Streicher
David Wong
Jeff Young
Yang Zhang (ORISE, Oak Ridge Science and Education
Program)

Model Evaluation and Application Research
Branch
Alice Gilliland, Chief
Melanie Ratteray (SEEP), Secretary
Wyat Appel
Jerry Davis (ORISE)
Brian Eder
Kristen Foley  (EPA), Post-Doc
Steve Howard
Sergey Napelenok
Chris Nolte
Rob Finder
Jenise Swall
Alfreida Torian
Gary Walter

Air-Surface Processes Modeling Branch
Tom Pierce, Chief
Jane Coleman (SEEP, Senior Environmental Employee
Program), Secretary
Bill Benjey
Jason Ching
Ellen Cooler
Robin Dennis
Vlad Isakov
George Pouliot
Donna Schwede
George Bowker, Fluid Modeling Facility
David Heist, Fluid Modeling Facility
Steve Perry, Fluid Modeling Facility
Ashok Patel (SEEP), Fluid Modeling Facility
John Rose (SEEP), Fluid Modeling Facility

Air Quality Forecasting Research Branch
Rohit Mathur, Chief
Ann Marie Carlton
Dale Gillette
Jerry Herwehe
Daiwen Kang (contractor)
Hsin-mu Lin (contractor)
Daniel Tong (contractor)
Shaocai Yu (contractor)

Applied Modeling Branch
Mark Evangelista, Chief
Dennis  Atkinson
Desmond Bailey
Pat Dolwick
Rich Mason
Brian Orndorff
Joe Touma
                                                  23

-------
                                                 Appendix B
                                 Division  and Branch  Descriptions
Division

The Division implements the Memorandum of
Understanding (MOU) and Memorandum of Agreement
(MOA) between the Department of Commerce (DOC) and
the Environmental Protection Agency (EPA). In this
capacity the Division develops and evaluates predictive
atmospheric models on all spatial and temporal scales for
forecasting the Nation's air quality, and for assessing
changes in air quality and air pollutant exposures, as
affected by changes in ecosystem management and
regulatory decisions. The Division is responsible for
providing a sound scientific and technical basis for
regulatory policies to improve ambient air quality. The
models developed by the Division are being used by EPA,
NOAA, and the air pollution community in understanding
and forecasting not only the magnitude of the air pollution
problem, but also in developing emission control policies
and regulations. Established in 1955, the Division serves as
the vehicle for implementing the agreements between
NOAA and EPA, which funds the research efforts.

The Division conducts atmospheric research in-house and
through contract and cooperative agreements with other
agencies, academia, and the private sector. With a staff of
NOAA and EPA scientists, the Division provides technical
information,  observational and forecasting support, and
consulting on all meteorological and modeling aspects of
the air pollution control program.  In addition to facilitating
research in the fields of air pollution meteorology and
atmospheric modeling, The Division interacts extensively
with academic and other scientific institutions in the U.S.
and abroad to help support NOAA's and EPA's mission-
oriented efforts as well as to  ensure that the environmental
community has the  benefit of the highest quality peer-
reviewed science in dealing with air pollution problems.

Atmospheric Model Development Branch

The Atmospheric Model Development Branch (AMDB)
develops, tests, and refines analytical, statistical, and
numerical models used to describe and assess relationships
between air pollutant source  emissions and resultant air
quality, deposition, and pollutant exposures to humans and
ecosystems.  The models are applicable to spatial scales
ranging from local/urban and mesoscale through regional,
including linkage with global models.  AMDB is a key
advocate in the meteorological modeling community for air
quality applications. AMDB adapts and extends
meteorological models to couple effectively with chemical-
transport models to create comprehensive air quality
modeling systems, including the capability for two-way
communication and feedback between the models.  AMDB
conducts studies to describe the atmospheric processes
affecting the transport, diffusion, transformation, and
removal of pollutants in and from the atmosphere using
theoretical approaches as well as from analyses of
monitoring and field study data.  The AMDB converts these
and other study results into models for simulating the
relevant physical and chemical processes and for
characterizing pollutant transport and fate in the
atmosphere.  AMDB conducts model exercises to assess the
sensitivity and uncertainty associated with model input
databases and applications results. AMDB's modeling
research is designed to produce tools to serve the nation's
need for science-based air quality decision-support systems.

Model Evaluation and Application Research
Branch

The Model Evaluation and Applications Branch (MEARB)
develops and applies advanced methods for evaluating the
performance of models in reproducing the observed air
quality.  MEARB provides  routine and high performance
computing support needed by the Division in the
development, evaluation, and application of environmental
models.  The Branch applies the Division's models to
important environmental problems, providing scientific
guidance on their use in air quality decision making. The
Branch fosters the application of new computational
techniques and tools to environmental simulation modeling
and contributes to the interagency Information Technology
Research and Development program.

Air-Surface Processes Modeling Branch

The Air-Surface Processes Modeling Branch (APMB)
performs process-based modeling research for the
Division's atmospheric pollutant models, with a focus on
three research themes:  (1) emissions modeling, (2)
deposition onto sensitive ecosystems, and (3) linkage of air
quality with human exposure. APMB's emissions modeling
effort (with a special emphasis on natural sources such as
wind-blown fugitive dust, wildfires,  and biogenic
emissions) helps ensure that meteorologically influenced
emissions are properly considered in air quality models.
APMB's deposition research uses state-of-the-art trace gas
flux measurements to develop tools for assessing nutrient
loadings and ecosystem vulnerability. APMB's urban-scale
modeling program (which includes collection and
integration of experimental data from its Fluid Modeling
                                                       30

-------
Facility is focused on building "hot-spot" air toxic analysis
algorithms and linkages to human exposure models.
Air Quality Forecasting Research Branch

The Air Quality Forecasting Research Branch (AQFRB)
fosters collaborations between NOAA and EPA in
developing, applying, and evaluating comprehensive models
for operational use for providing short-term air quality
forecast guidance. Through the continuous application of
the linked meteorological and chemistry-transport models
and analysis of its predictions, AQFRB develops diagnostic
information on model performance to guide further
development and enhancement of physical and chemical
process representations in the models. AQFRB also works
on extending the utility of the daily air quality forecast
model data being produced by NOAA's National Weather
Service (NWS) as part of the NOAA-EPA collaboration in
air quality forecasting, to EPA mission-oriented activities.
These include developing and maintaining a long-term
database of air quality modeling results (ozone and PM2.5),
performing periodic analysis and assessments using the
data, and making the air quality database available and
accessible to States, Regions, RPO's and others to use as
input data for regional/local scale air quality modeling for
policy/regulatory purposes.

Applied Modeling Branch

The Applied Modeling Branch (AMB) evaluates,  modifies,
and improves atmospheric modeling systems and  simulation
techniques to ensure appropriateness and consistency with
established scientific principles.  The Branch evaluates the
effect of meteorological conditions on air quality and on the
environmental decisions that are based upon air quality
assessments and simulations.

-------
                                            Appendix C
                                    Awards and  Recognition
Distinguished Career Award
    •   Dale Gillette - For Outstanding Theoretical and
       Empirical Contributions - International Conference
       on Aeolian Research

NOAA Silver Medal
    •   Ken Schere, Jon Pleim, George Pouliot, Tanya
       Otte, and Jeff Young - CMAQ Air Quality Forecast
       Team

EPA Bronze Medals
    •   David Mob ley and Jeff West - NARSTO Emission
       Inventory Assessment
    •   Joe Touma and Rich Mason - 2002 National Air
       Toxics Assessment
    •   Mark Evangelista and Desmond Bailey - Modeling
       guidance for the Best Available Retrofit
       Technology Rule

EPA Administrator's Award for Excellence
    •   Pat Dolwick - Economic Analysis Tool
       Development Team

EPA Special Act/Time Off Awards
    •   David Mobley, Adam Reff, Golam Sarwar, and
       Prakash Bhave - SPECIATE Update
    •   Deborah Luecken - CB05 Development
    •   George Bowker - Sand Flux Modeling Papers
    •   Dev Roy - Remote Sensing Support and Analysis
    •   Bill Hutzell - Addition of toxic species to CMAQ

NERL Special Achievement Awards
    •   Ken Schere - Goal 2: Promote High-Performing
       Organization
    •   Robin Dennis - Goal 3: Leadership in the
       Environmental Research Community
    •   Prakash Bhave - Goal 4:  Science Integration -
       Inter-divisional-laboratory research
    •   Alice Gilliland and Vlad Isakov - Goal 5:
       Identifying and Addressing Future Issues
    •   Jeff West - Quality Assurance Award
    •   David Heist and Steve Perry - Health and Safety
       Award

NOAA ClYA/Special Act/Time-Off Awards
    •   Wyat Appel - Testing new evaluation methods to
       better account for the nature of the data and model
    •   Sherry Brown - Analysis and resolution of NOAA
       property records and issues
    •   Russ Bullock - Facilitating a major collaborative
       intercomparison of models and model simulation
       results for atmospheric mercury
    •   Ellen Cooler - Programmatic and technical support
       to the CIRAQ program
    •   Mark Evangelista - Program and policy support for
       model applications
    •   Veronica Freeman-Green - Provided exemplary
       support in budget, human resources, and
       purchasing
    •   Val Garcia and Linda Green - Resolution of long-
       standing billing issues associated with the IAG
    •   Rob Gilliam - Evaluating the meteorological model
       used for CIRAQ
    •   Jim Godowitch - Analysis on the effectiveness of
       major reductions in NOX emissions on ozone
       concentrations
    •   Rohit Mathur - Transition of NOAA-EPA Air
       Quality Forecast System to the WRF-NMM system
    •   Trish McGhee - Exemplary support to the Division
    •   Chris Nolle - Completing CMAQ simulations to
       sludy air quality sensitivities lo future climate
       scenarios as part of CIRAQ (Congressional APM)
    •   Tom Pierce - Developmenl of research program in
       linking sources lo human exposure
    •   Evelyn Poole-Kober - Analysis and reconciliation
       of NOAA and EPA peer review database
                                                  32

-------
                                               Appendix D
                                               Publications
                                      (Division authors in  bold)
Journal Articles
Allen, J.O., P.V. Bhave, J.R. Whiteaker, and K.A. Prather.
  Instalment busy time and mass measurement using aerosol
  time-of-flight mass spectrometry. Aerosol Science and
  Technology, 40:615-626 (2006).

Arnold, J.R., and R.L. Dennis. Testing CMAQ chemistry
  sensitivities in base case and emissions control runs at
  SEARCH and SOS99 surfaces sites in the southeastern U.S.
  Atmospheric Environment, 40(26):5027-5040 (2006).

Bowker, G.E.,  D.A. Gillette, G. Bergametti, and B.
  Marticorena.  Modeling flow patterns in a small vegetated
  area in the Northern Chihuahuan Desert using QUIC (Quick
  Urban & Industrial Complex). Environmental Fluid
  Mechanics, 6:359-384 (2006).

Byun, D., and K.L. Schere. Review of the governing
  equations, computational algorithms, and other components
  of the Models-3 Community Multiscale Air Quality
  (CMAQ) modeling system. Applied Mechanics Reviews,
  59:51-77(2006).

Ching, J., J. Herwehe, and J.  Swall. On joint deterministic
  grid modeling and sub-grid variability conceptual
  framework for model evaluation. Atmospheric Environment,
  40(26):4935-4945 (2006).

Davis, J.M., and J.L. Swall. An examination of the CMAQ
  simulations of the wet deposition ammonium from a
  Bayesian perspective. Atmospheric Environment,
  40(24):4562-4573 (2006).

Eder, B., D. Kang, R Mathur, S.Yu, and K. Schere. An
  operational evaluation of the Eta-CMAQ air quality forecast
  model. Atmospheric Environment 40(26):4894-4905 (2006)

Eder, B., and S. Yu. A performance evaluation of the 2004
  release of Models-3 CMAQ. Atmospheric Environment,
  40(26):4811-4824 (2006).
Gillette, D.A., J.E. Herrick, and G.A. Herbert. Wind
  characteristics of mesquite streets in the Northern
  Chihuahuan Desert, New Mexico, USA. Environmental
  Fluid Mechanics, 6:241-275 (2006).

Gilliam, R.C., C. Hogrefe, and S.T. Rao. New methods for
  evaluating meteorological models used in air quality
  applications. Atmospheric Environment, 40(26):5073-5086
  (2006).

Gilliland, A.B., K.W. Appel, RW. Finder, and RL. Dennis.
  Seasonal NH3 emissions: Inverse model estimation and
  evaluation. Atmospheric Environment, 40(26) :4986-4998
  (2006).

Hanna, A., and W. Benjey. Preface. Special issue on model
  evaluation: Evaluation of urban and regional Eulerian air
  quality models. Atmospheric Environment, 40(26) :4809-
  4810 (2006).

Hanna, S.R., MJ. Brown, F.E. Camelli, S.T. Chan, W.J.
  Coirier, O.R. Hansen, A.H. Huber, S. Kim, and R.M.
  Reynolds. Detailed simulations of atmospheric flow and
  dispersion in urban downtown areas by Computational Fluid
  Dynamics (CFD) Models - An application of five CFD
  Models to Manhattan. Bulletin of the American
  Meteorological Society, 87(12):1699-1712. (2006).

Hogrefe,  C., P.S. Porter, E. Gego, A. Gilliland, R Gilliam, J.
  Swall, J. Irwin, and S.T. Rao. Temporal features in
  observed and simulated meteorology and air quality over the
  Eastern United States. Atmospheric Environment,
  40(26):5041 -5055 (2006).

Huber, A.H. Development of CEO simulations in support of
  air quality studies. Wind Engineering Research Center,
  Tokyo Polytechnic University. Wind Effects Bulletin, 5:8-10
  (2006).
                                                     33

-------
Huber, A.H., M. Freeman, R. Spencer, W. Schwartz, B. Bell,
  and K. Kuehlert. Pollution dispersion in urban landscapes.
  Fluent News, XV(2): 13-16 (2006).

Isakov, V., and A. Venkatram. Resolving neighborhood scale
  in air toxics modeling: a case study in Wilmington,
  California. Journal of Air &  Waste Management
  Association, 56:559-568 (2006).

Isakov, V., S. Graham, J. Burke, and H.  Ozkaynak. Linking
  air quality and exposure models. Environmental Manager,
  September, 26-29 (2006).

Luecken, D., W. Hutzell,  and G. Gipson. Development and
  analysis of air quality modeling simulations for hazardous
  air pollutants. Atmospheric Environment special issue on
  Model Evaluation: Evaluation of Urban and regional
  Eulerian Air Quality Models, 40(26):5087-5096 (2006).

Miller, A.C., G. Hidy, J. Hales, C.E. Kolb, A. S. Werner, B.
  Haneke, D. Parrish, H. C. Frey, L. Rojas-Bracho, M.
  Deslauriers, B, Pennell, and J.D. Mobley.  Air emission
  inventories in North America: A critical assessment. Air &
  Waste Management Association, 56:1115-1129 (2006).

Okin, G., and D.A. Gillette. Multi-scale controls on and
  consequences of aeolian processes in landscape change in
  arid and semi-arid environments. Journal of Arid
  Environments, 65:253-275 (2006).

Pennell, W., and D. Mobley. The case for improving emission
  inventories in North America. Environmental Manager,
  January: 24-27 (2006).

Phillips, S.B., and P.L Finkelstein. Comparison of spatial
  patterns  of pollutant distribution with CMAQ predictions.
  Atmospheric Environment, 40(26):4999-5009 (2006).

Finder, RW, P.J. Adams, S.N. Pandis, and  A.B. Gilliland.
  Temporally resolved ammonia emission inventories:
  Current estimates, evaluation tools, and measurement needs.
  Journal  of Geophysical Research-Atmospheres, 111(D1
  6310): 1-14(2006).

Pinto, J.P., L.D. Grant, A.F. Vette, and A.H.  Huber.
  Evaluation of potential human exposures to airborne
  paniculate mailer following the collapse of the World Trade
  Center towers. In Urban Aerosols and Their Impacts--
  Lessons Learned from the World Trade Center Tragedy. J.S.
  Gaffney, andNA. Marley (Eds.). American Chemical
  Society,  Washington, DC, 190-237 (2006).

Pleim, J.E. A simple efficient solution of flux-profile
  relationships in the atmospheric surface layer. Journal of
  Applied Meteorology and Climatology, 45:341-347 (2006).
Qin, X., P.V. Bhave, and K.A. Prather. Comparison of two
  methods for obtaining quantitative mass concentrations
  from aerosol time-of-flight mass spectrometry
  measurements. Analytical Chemistry, 78:6169-6178 (2006).

Rao, S.T. Understanding the relationships between air quality
  and human health. Environmental Manager, September, 6-7
  (2006).

Swall, J.L., and J.M. Davis. A Bayesian statistical approach
  for the evaluation of CMAQ. Atmospheric Environment,
  40(26):4883-4893 (2006).

Touma, J.S., V. Isakov, J. Ching, and C.  Seigneur. Air
  quality modeling of hazardous pollutants: Current status and
  future directions. Journal of Air & Waste Management
  Association, 56:547-558 (2006).

Yu. S., B. Eder, R Dennis, S. H.Chu, and S.E. Schwartz.
  New unbiased symmetric metrics for evaluation of air
  quality models. Atmospheric Science Letters, 7:26-34
  (2006).

Yu, S., R Mathur, D. Kang, K. Schere, B. Eder, and J.
  Pleim. Performance and diagnostic evaluation of ozone
  predictions by the Eta-Community Multiscale Air Quality
  Forecast System during the 2002 New England Air Quality
  Study. Journal of the Air & Waste Management
  Association, 56:1459-1471, (2006).

Yuan, J., A. Venkatram, and V. Isakov. Dispersion from
  ground-level sources in a shoreline urban area. Atmospheric
  Environment, 40:1361-1372  (2006).

Zhang, KM., E.M. Khipping, A.S. Wexler, P.V. Bhave,  and
  G.S. Tonnesen. Reply to comment on "Size distribution of
  sea-salt emissions as a function of relative humidity."
  Atmospheric Environment, 40:591-592 (2006).

Book Chapters
Gillette, D.A., and H.C. Monger. Eolian processes on the
  Jornada Basin. In Structure and Function of a Chihuahuan
  Desert Ecosystem. Jornada Long Term Ecological Research
  Volume. Chapter 9. Havstad, KM., L.F. Huenneke, and
  W.H. Schlesinger (Eds.). Oxford University Press, New
  York, 189-210 (2006).

Conference Papers and Proceedings
Appel, W. K., and A.B. Gilliland. Effects of vertical-layer
  structure and boundary conditions on CMAQ v4.5 and v4.6
  model performance. 5th Annual CMASModels - 3 User's
  Conference, Chapel Hill, NC, Oct. 16-18, 2006.
                                                      34

-------
Bowker, G.E., D.K. Heist, S.G. Perry, L.A. Brixey, R.S.
  Thompson, and R. W. Wiener. The influence of a tall
  building on street canyon flow in an urban neighborhood.
  Preprints, 28th NATO/CCMSInternational Technical
  Meeting on Air Pollution Modeling and its Application,
  Leipzig, Germany, pp. 58-59, May 15-19, 2006.

Brown, M.J., S.U. Pal, W. Coiner, S. Kim, A.  Huber, M.A.
  Nelson, P. Klein, M. Freeman, and A. Gowardhan.
  Experimental and model-computed area-averaged vertical
  profiles of wind speed for evaluation of mesoscale urban
  canopy schemes. Preprints, 6th Symposium on Urban
  Environment, Atlanta, Georgia. American Meteorological
  Society, Boston, Paper Jl .7, available online
  http://ams.confex.com/ams/pdfpapers/105229.pdf. Jan. 29-
  Feb. 2, 2006.

Bullock, O.R, Jr., D. Atkinson, T. Braverman, A. Dastoor,
  D. Davignon, N. Eckley Selin, D. Jacob, K.  Lohman, C.
  Seigneur, K.  Vijayaraghavan, T. Myers, K.  Civerolo, and C.
  Hoprefo. The North American Mercury Model Inter-
  comparison Study (NAMMIS). Preprints, 28th NATO/CCMS
  International Technical Meeting on Air Pollution Modeling
  and its Application, Leipzig, Germany, pp. 60-61, May 15-
  19, 2006.

Bullock, O.  R, Jr., and T. Braverman. Application of the
  CMAQ mercury model for U.S. EPA regulatory support.
  Preprints, 28th NATO/CCMS International Technical
  Meeting on Air Pollution Modeling and its Application,
  Leipzig, Germany, pp. 62-69, May 15-19, 2006.

Ching, J., V. Isakov, MA. Majeed, and J.S. Irwin An
  approach for incorporating sub-grid variability information
  into air quality modeling. Proceedings,  14th Joint
  Conference on the Applications of Air Pollution
  Meteorology with the Air and Waste Management
  Association, Atlanta, GA, pp. 11, Jan. 28- Feb. 2, 2006.

Cooter, E.J., R Gil Mam  W. Benjey, C.  Nolte, J. Swall, and
  A. Gill Hand  Examining the impact of changing climate on
  regional air quality over the United States. Preprints, 28th
  NATO/CCMS International Technical Meeting on Air
  Pollution Modeling and its Application, Leipzig, Germany,
  pp. 100-113, May 15-19,2006.

Godowitch,  J., A.B. Gilliland, S.T. Rao, F. Gego, and P.S.
  Porter. Integrated observational and modeling approaches
  for evaluating the impact of emission control policies.
  Preprints, 28th NATO/CCMS International Technical
  Meeting on Air Pollution Modeling and its Application,
  Leipzig, Germany, pp.  198, May 15-19, 2006.

Godowitch,  J.M. and R.R. Draxler. Linking the CMAQ and
  HYSPLIT modeling systems: Interface program and
  example application. 5th Annual CMAS Models - 3 User's
  Conference, Chapel Hill, North Carolina, Oct. 16-18, 2006.
Huber, A.H., M. Freeman, R. Spencer, B. Bell, K. Kuehlert,
  and W. Schwarz. Development and applications of CFD
  simulations supporting urban air quality and homeland
  security. Preprints, 6th Symposium on Urban Environment,
  Atlanta, Georgia. American Meteorological Society,
  Boston, Paper J7.4, available online at
  http://ams.confex.com/ams/pdfpapers/105308.pdf. Jan. 29-
  Feb. 2, 2006.

Huber, A.H.  A framework for fine-scale computational fluid
  dynamics air quality modeling and analysis. 5th Annual
  CMAS Models - 3  User's Conference, Chapel Hill, NC,
  Oct. 16-18, 2006.

Hutzell, W.T., G. Pouliot, and D.J. Luecken. Changes to the
  chemical mechanisms for hazardous air pollutants in CMAQ
  version 4.6. 5th Annual CMAS Models - 3 User's
  Conference, Chapel Hill, North Carolina, Oct. 16-18, 2006.

Kang, D., R Mathur, S. Yu, and K. Schere. Performance
  characteristics of Eta-CMAQ 03 forecast over different
  regions of the Continental United States. Preprints, 28th
  NATO/CCMS International Technical Meeting on Air
  Pollution Modeling and its Application, Leipzig, Germany,
  pp. 314-321, May 15-19,2006.

Otte, T.L. The value of nudging in the meteorological model
  for retrospective CMAQ simulations. 5th Annual  CMAS
  Models-3 User's Conference, Chapel Hill, NC, Oct.  16-18,
  2006.

Pleim, J.E. A new combined local and non-local PEL model
  for meteorology and air quality modeling. 5th Annual CMAS
  Models- 3 User's Conference, Chapel Hill, NC, Oct. 16-
  18, 2006.

Pleim, J.E., S. Roselle, P. Bhave, R Bullock, Jr., W.
  Hutzell, D. Luecken, C. Nolte, G. Sarwar, K. Schere, J.
  Young, J. Godowitch,  and W. Appel. The 2006 CMAQ
  release and plans for 2007. 5th Annual CMAS Models - 3
  User's Conference, Chapel Hill, NC, Oct. 16-18, 2006.

Porter, P.S., E. Gego, A. Gilliland, C. Hogrefe, J. Godowitch,
  and S.T. Rao. Modeling assessment of the impact of
  nitrogen oxide emission reductions on ozone air quality in
  the eastern United States: Offsetting increases in energy use.
  28th NATO/CCMS International Technical Meeting on Air
  Pollution Modeling and its Application, Leipzig, Germany,
  May 15-19, 2006.

Porter, P.S. and S.T. Rao.  The relationship between
  meteorology and NOX emissions from electrical generating
  units in the U.S. 28th NATO/CCMS International Technical
  Meeting on Air Pollution Modeling and its Application,
  Leipzig, Germany, May 15-19, 2006.
                                                      35

-------
Sarwar, G., D. Luecken, and G. Yarwood. Developing and
  implementing an updated chlorine chemistry into the
  Community Multiscale Air Quality model. Preprints, 28th
  NATO/CCMSInternational Technical Meeting on Air
  Pollution Modeling and its Application, Leipzig, Germany,
  pp. 497-504, May 15-19, 2006.

Schere, K., V. Bouchet, G. Grell, J. McHenry, and S.
  McKeen. The emergence of numerical air quality
  forecasting models and their application. Preprints, 14*
  Joint Conference on the Applications of Air Pollution
  Meteorology with the Air & Waste Management
  Association, and 86th Conference on Atmospheric
  Chemistry, Atlanta, Georgia. American Meteorological
  Society, Boston, Paper J10.1, available online at
  http://ams.confex.com/ams/pdfpapers/102293.pdf. Jan. 29-
  Feb. 2, 2006.

Tang, W., A. Huber, B. Bell, K. Kuehlert, and W. Schwarz.
  Application of CFD simulations for short-range atmospheric
  dispersion over open fields and within arrays of building.
  Preprints, 14th Joint Conference on the Applications of Air
  Pollution Meteorology with the Air & Waste Management
  Association, Atlanta, Georgia. American Meteorological
  Society, Boston, Paper JI .8, available online at
  http://ams.confex.com/ams/pdfpapers/104335.pdf. Jan. 29-
  Feb. 2, 2006.

Yu, S.,  R Mathur, K. Schere, D. Kang, J. Pleim, J. Young,
  and T. Otte. A study of process contributions to ozone
  formation during the 2004 ICARTT period using the Eta-
  CMAQ forecast model over the Northeastern U.S.  Preprints,
  28th NATO/CCMS International Technical Meeting on Air
  Pollution Modeling and its Application, Leipzig, Germany,
  pp. 608-615, May 15-19, 2006.
                                                      36

-------
United States
Environmental Protection
Agency
Please make all necessary changes on the below label,
detach or copy, and return to the address in the upper
left-hand corner.

If you do not wish to receive these reports CHECK HERE n;
detach, or copy this cover, and return to the address in the
upper left-hand corner.
PRESORTED STANDARD
 POSTAGE & FEES PAID
          EPA
    PERMIT No. G-35
Office of Research
and Development (8101R)
Washington, DC 20460

Official Business
Penalty for Private Use
$300
EPA/600/R-07/103
09/2007
NOAA Technical
Memorandum
OAR ARL-259
10/2007

-------