osr             UNITED STATES ENVIRONMENTAL PROTECTION AGENCY
 -^ —%                         WASHINGTON D.C. 20460
                                                              OFFICE OF THE ADMINISTRATOR
                                                                SCIENCE ADVISORY BOARD
                                 November 29, 2007

EPA-CASAC-08-003

Honorable Stephen L. Johnson
Administrator
U.S. Environmental Protection Agency
1200 Pennsylvania Avenue, NW
Washington, DC 20460

       Subj ect:       Clean Air Scientific Advisory Committee's (CASAC) NOX & SOX
                    Secondary NAAQS Review Panel's Consultation on EPA's Draft Plan
                   for Review of the Secondary NAAQS for Nitrogen Dioxide and Sulfur
                    Dioxide (September 2007 Draft)

Dear Administrator Johnson:

The Clean Air Scientific Advisory Committee (CASAC) NOX & SOX Secondary NAAQS
Review Panel met on October 30, 2007 and has completed its consultative review of EPA's
Draft Plan for Review of the Secondary NAAQS for Nitrogen Dioxide and Sulfur Dioxide
(September 2007 Draft). A consultation is conducted under the normal requirements of the
Federal Advisory Committee Act, which include advance notice of the public meeting in the
Federal Register.  The CASAC uses a consultation as a mechanism for individual technical
experts to provide comments on the Agency's draft plan for developing technical assessments
as the basis of the review of the secondary NAAQS review for NOX and SOX. Written
comments provided by the individual Panelists are attached to this letter. As this is a
consultation, we do not expect a formal response from the Agency.

       We thank the Agency for the opportunity to provide advice early in the NAAQS review
process, and look forward to the review of the draft Integrated Science Assessment in March
2008.

                                 Sincerely,

                                 /Signed/

                                 Armistead (Ted) Russell, Ph.D.
                                 Chair, CASAC NOX & SOX Secondary Review Panel

Attachments

Attachment A: Roster of CASAC NOX & SOX Secondary NAAQS Review Panel
Attachment B: Compilation of Individual Panel Member Comments on EPA's Draft Plan for Review
of the Secondary NAAQS for Nitrogen Dioxide and Sulfur Dioxide (September 2007 Draft)

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Attachment A:  Roster of CASAC NOX & SOX Secondary NAAQS Review Panel

                  U.S. Environmental Protection Agency
                 Clean Air Scientific Advisory Committee
              NOX & SOX Secondary NAAQS Review Panel

CASAC MEMBERS

Dr. Armistead (Ted) Russell (Chair), Professor, Department of Civil and
Environmental Engineering, Georgia Institute of Technology, Atlanta, GA
Dr. Ellis B. Cowling, Emeritus Professor, Colleges of Natural Resources and Agriculture
and Life Sciences, North Carolina State University, Raleigh, NC
Dr. Douglas Crawford-Brown, Professor and Director, Department of Environmental
Sciences and Engineering, Carolina Environmental Program, University of North
Carolina at Chapel Hill, Chapel Hill, NC
Dr. Donna Kenski, Director, Lake Michigan Air Directors Consortium, Rosemont, IL

PANEL MEMBERS

Dr. Praveen Amar, Director, Science and Policy, NESCAUM, Boston, MA
Dr. Andrzej Bytnerowicz, Senior Scientist, Pacific Southwest Research Station, USDA
Forest Service, Riverside, CA
Ms. Lauraine Chestnut, Managing Economist, Stratus Consulting Inc., Boulder, CO
Dr. Charles T. Driscoll, Jr., Professor, Environmental  Systems Engineering, College of
Engineering and Computer Science, Syracuse University, Syracuse, NY
Dr. Paul J. Hanson, Distinguished R&D Staff Member, Environmental Sciences
Division, Oak Ridge National Laboratory, Oak Ridge, TN
Dr. Rudolf Husar, Professor and Director, Mechanical Engineering, Engineering and
Applied Science, Center for Air Pollution Impact & Trend Analysis (CAPITA),
Washington University, St. Louis, MO
Dr. Dale Johnson, Professor, Department of Environmental and Resource Sciences,
College of Agriculture, University of Nevada, Reno, NV
Dr. Naresh Kumar, Senior Program Manager, Environment Division,  Electric Power
Research Institute, Palo Alto, CA
Dr. Myron Mitchell, Distinguished Professor and Director, College of Environmental
and Forestry, Council on Hydrologic Systems Science, State University of New York,
Syracuse, NY
Mr. Richard L. Poirot, Environmental Analyst, Air Pollution Control  Division,
Department of Environmental Conservation, Vermont Agency of Natural Resources,
Waterbury, VT
Mr. David J. Shaw, Director, Division of Air Resources, New York State Department of
Environmental Conservation, Albany, NY
Dr. Kathleen Weathers, Senior Scientist, Institute of Ecosystem Studies, Millbrook, NY

SCIENCE ADVISORY BOARD STAFF
Ms. Kyndall Barry, Designated Federal Officer, 1200 Pennsylvania Avenue, NW
1400F, Washington, DC, Phone: 202-343-9868, Fax: 202-233-0643,
(barry.kyndall@epa.gov)

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  Attachment B: Compilation of Individual Panel Member Comments on EPA's Draft
   Plan for Review of the Secondary NAAQSfor Nitrogen Dioxide and Sulfur Dioxide
                           (September 2007 Draft)

Comments from CASAC NOX & SOX Secondary NAAQS Review Panel on EPA's
Draft Plan for Review of the Secondary NAAQSfor Nitrogen Dioxide and Sulfur Dioxide
(September 2007 Draft)

Comments from Dr. Praveen Amar	4
Comments from Dr. Andrzej Bytnerowicz	6
Comments from Ms. Lauraine Chestnut	9
Comments from Dr. Ellis Cowling	11
Comments from Dr. Douglas Crawford Brown	21
Comments from Dr. Charles Driscoll	23
Comments from Dr. Paul Hanson	25
Comments from Dr. Rudolf Husar	27
Comments from Dr. Dale Johnson	28
Comments from Dr. Donna Kenski	32
Comments from Dr. Myron Mitchell	36
Comments from Mr. Richard Poirot	36
Comments from Mr. David Shaw	43
Comments from Dr. Kathleen Weathers	44

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Comments from Dr. Praveen Amar

EPA's Draft plan is a commendable effort on the part of EPA staff to present in a short
document the key policy-relevant issues, and then describe how it will assess issues
related to (1) science, (2) risk-exposure, and (3) policy, as they inform the complex
process of establishing secondary standards for both NC>2 and SC>2.

The draft plan, to its credit, recognizes that we have arrived at the current state of affairs
in establishing separate NAAQS for 862 and NC>2 in an ad hoc manner by historically
considering "one pollutant" or "one atmospheric or ecological issue" at a time. The goal
of considering the two pollutants in a joint "integrated" manner under the current review
process, because of the "science-entanglement" of both the atmospheric processes and
ecological effects of the two pollutants, is worthwhile, but not without its own set of
policy-related problems. For example, such a "multi-pollutant/one atmosphere/diverse
and variable ecosystems" approach can easily lead to a policy-situation where one can
not make "some" necessary policy decisions unless one is ready to make "all" decisions.
For example, we should be careful that such an "integrated" approach does not lead to not
setting a nitrogen-based standard in the context of eutrophication of water bodies in
certain regions of the US in the absence of complete information relating to sulfur-based
impacts.

The Draft Plan (page 1-13) notes that the role of ammonia "will be considered," while it
is "not the focus of this review." It goes on to state that "a detailed discuss (sic) of these
processes is included in the PM review." I think it is important that ammonia also be the
focus of this review in the context of "total nitrogen and total sulfur", and not just the
oxidized forms of nitrogen and sulfur. This means that its emissions at about five million
tons per year in the US (there  is high level of uncertainty associated with this estimate),
location of its major sources in the US, its role in long-range atmospheric transport and
then deposition as ammonium sulfate and ammonium nitrate, its chemistry in the
atmosphere and in soils, and its ecological impacts, all of these factors need to be the
focus of this effort. For example, questions like "Is NC>2 a good indicator of oxidized
nitrogen in the atmosphere? Are there others?" may not even be the right questions to ask
if the  focus is on total nitrogen and its deposition to the ecosystems (oxidized and
reduced). Same reasoning may also be applicable to SCVtotal sulfur.

The Draft Plan in all of its major Sections (key policy-relevant issues, science
assessment, risk/exposure assessment, and policy assessment) does not discuss the issue
of how the review process would evaluate the critical load-based approach as an
alternative to promulgating ambient concentration-based standards.  It appears to me that
this is a major oversight of the Draft Plan. For example, Chapter 8 (the science annex on
critical loads, July 2007 draft version) quotes the 2004 National Research Council (NRC)
report, "... However,  concentration-based  standards are inappropriate for some resources
at risk from air pollutants,  including soils, groundwater, surface waters, and coastal
ecosystems. For such resources, a deposition-based standard would be more appropriate.
One approach for establishing such a  deposition-based standard is through the use of so-

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called "critical loads."  At a minimum, the Draft Plan should be revised to describe how it
would address critical load-based approach.

Finally, I will like the Draft Plan to be more explicit in how the process of establishing
secondary standards will address uncertainties in inputs and outputs (emissions, CMAQ
models, rate constants in atmospheric chemistry processes, deposition maps, ecosystems
modeling, etc.) and how these uncertainties would affect the judgments that must be
made in recommending standards or range of standards. Each of the many models that
would be used in this process would generate outputs with associated uncertainties that
then will be used as inputs for subsequent models across a set of linked modules
(Appendix B of the Draft Plan describes this process but at a very cursory level).  There
are numerical and analytical methods available for propagating uncertainty across
modules for quantifiable sources of uncertainties. For uncertainties that are difficult to
quantify, there are "scenario-based" methods that can be used to bound the results.
However,  propagating uncertainty across models and modules represents  only one part of
the puzzle: the results of these analyses require communication to policy-makers and
other interested stakeholders. Uncertainty analyses, particularly multi-dimensional ones
necessary  for establishing secondary standards for SC>2 and NC>2, can be difficult to
communicate and to understand, hindering their use in  policy-making. To address this, I
suggest that the Draft Plan address the issue of quantifying uncertainty in several  models
used in the review process and develop  an integrated uncertainty analyses and also
develop communication tools to explain the implications of uncertainty in decision
making.

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Comments from Dr. Andrzej Bytnerowicz

General Comments

Generally, the document is well written, logically structured, and can serve as a good
start of discussions on possible revision of the NO2 and SO2 NAAQS. The first phase of
the process (integrated review plan), as well as three other phases (Integrated Science
Assessment, risk exposure assessment and policy assessment and rulemaking) are
logically and clearly presented.

It would be helpful to clarify what N pollutants should be discussed as those which may
have secondary (welfare) effects. In my opinion, in regard to the oxidized N compounds,
we should not discuss  only NOx (which is just a sum of NO2 and NO), but rather NOy,
which includes NOx and also other gases of a potential ecological importance such as
nitric acid vapor (HNO3) or peroxyacetyl nitrate (PAN) (Seinfeld and Pandis, 1998, p.
71). It would be even better if we could use a term "N gaseous compounds", since
reduced species such as NH3 also have pronounced ecological effects.

I would be even more comfortable with a term "welfare effects resulting from deposition
of criteria pollutants (NO2 and SO2) and their transformation products" (p. 1-7, lines 22-
23).

Changing climate should be considered in development of the secondary NO2 & SO2
NAAQS as a modifier of the ecological effects of N and S deposition. For example, in
western ecosystems the effects of elevated levels of N deposition or ambient ozone
(increased above-ground biomass production, reduced water availability, premature foliar
senescence) can be enhanced by elevated temperatures, drought or winds of higher speed
and frequency. All these factors may lead to catastrophic fires as those from 2003 and
these recently observed in southern California.

Specific Comments

1. Introduction

Generally Introduction is well written and offers a good basis for the rest of the
document.

However, in reference to my above statement, I suggest that on page 1-10, line 5, a
change is made: "In addition to acidification, NOx and HNO3 act with ...".
Alternatively, it could  be changed to: "In addition to acidification, NOy acts with.

Page 1-12, line 12 -instead of considering NO2 and its transformation products, it could
be better to stress that NOy contributes to N loading of ecosystems. If such a change is
made, than HNO3, which provides large proportion of oxidized N to ecosystems,
especially in dry climate, would be automatically included.

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Page 1-13. It is a very important section emphasizing a need for including reduced N
compounds if deposition and ecological effects are concerned.

Page 1-13, line 14 - recent evidence suggests that fine paniculate matter can also reduce
precipitation in mountainous areas of California and elsewhere (Rosenfeld et al., 2007).

3. Key Policy-Relevant Issues

Page 3-1, line 21 - it is not scientifically correct to say "particulate NOx and SOx". The
authors probably had in mind N and S aerosols, including fine particulate nitrate and
sulfate.

4. Science Assessment

Page 4-1, line 5, and the following text. Again, more precision is using various chemical
terms is needed. Criteria pollutants are SO2 and NO2, not NOx and SOx. Maybe a term
"SO2 & NO2 and their transformation products" would be more  appropriate.

Page 4-2 lines 4 and 5.1 would like to suggest that also "gray" literature, specifically
reports, such as those from the UN ECE ICP Forest and ICP Mapping and Modelling
dealing with issues of Critical Loads for S, N and acidity could also be considered. These
reports have been internally reviewed  and may have an important practical value for
developing similar approaches in the US.

Page 4-1, lines 9 and 10. I would also consider recent information  from CASTNET and
various passive sampler networks in US and Europe, on HNO3 concentrations. In some
areas, information of ambient NH3 is also becoming available (mostly from large-scale
passive sampler networks). Information on these two gases, which  due to their high
deposition velocity provide significant amounts  of N to ecosystems, could be quite
valuable.

Page 4-2, line 25 and 26. Ammonia (NH3) should also be added to the proposed literature
search.

Page 4-3, lines 8-21, again, I would like to emphasize again a potential value of the ICP
Mapping and Modelling and ICP Forests annual reports.

Page 4-3, lines 18 and 19. Modifying effects of the changing climatic conditions (in
western conditions, increasing temperature, reduced precipitation and long - term
drought) or increasing background concentrations of ambient ozone should be
considered.

Page 4-5, lines 1  - 16. Passive sampler networks (for HNO3, NH3, NO, NO2 or SO2)
can provide the receptor-level data that can be used for validation of the deposition
models. Use of geostatistics (such as ArcGIS Geostatistical Analyst) may greatly help in
translating point data into landscape-level concentration surfaces.

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5. Risk /Exposure Assessment

Page 5-1, line 8 - the recommended by NRC (2004) critical loads approach for N, S ands
acidity (already widely used in Europe) could be considered. The US FS is already
developing a strategy for measuring parameters needed for calculation of CL for N & S
on a network of experimental forest and FS-managed LTER sites (21 sites altogether
nationwide).

Page 5-2, lines 5-10. Air pollution gradient studies or large-scale monitoring/research
networks linking information on air chemistry, deposition and ecological responses could
be considered.

Page 5-2, lines 11-15. Responses of ecosystems to N and S deposition in mesic (East)
and arid (West) climates are quite different and should be better studied. Due to high
diversity of the US ecosystems, an understanding of the occurring changes on a
continental scale may be more  difficult than in Europe.  International cooperation with
partners in Europe and Asia may greatly help in understanding of N deposition responses
in two types of climate. In addition, responses of mountain ecosystems (forests, sub-
alpine and alpine) should be taken into serious consideration. Since ecological effects of
climate change in high elevation forests have been very strong in recent years,
interactions with elevated N &  S deposition and increasing background ozone
concentrations should be investigated.
Literature:

Rosenfeld, D., J. Dai, X. Yu, Z. Yao, X. Xu, X Yang, C. Du. 2007. Inverse relationship
between amounts of air pollution and orographic precipitation. Science, 315, 9 March
2007, 1396-1398.

Seinfeld, J., & S. N. Pandis. 1998. Atmospheric Chemistry and Physics -from Air
pollution to Climate Change. John Wiley and Sons, Inc., New York, 1326 pp.

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Comments from Ms. Lauraine Chestnut

The draft plan gives a comprehensive overview of the ambitious scientific review and
policy assessment process planned by EPA for determining what secondary standard
might be appropriate, if any, for the deposition related effects of NOx and SOx. I have
just a few questions and comments on the policy aspects of this plan.

How  much needs to be known to provide a defensible basis for setting a secondary
standard for the deposition-related effects of NOx and SOx?

If all the questions articulated here could be answered then the decisions about standards
would be fairly straightforward. Difficulties will arise, of course, because current science
and analysis tools will not be able to answer many of these important questions.
Judgments will be necessary about whether there is sufficient information to provide a
defensible basis for selecting a secondary standard. Does the secondary standard
language provide guidance on this issue? With the primary standards, the presumption is
to be  protective of human health, but with public welfare is the presumption the same?
Public welfare is definitely impacted by standards that impose costs; so how firm must
the evidence be that the standards prevent an adverse impact?

The plan mentions the need to assess the progress expected in reducing deposition
precursors as a result of the primary NAAQS (e.g., for PM and ozone) and current
regulations (e.g., CAIR), but this is an important issue that perhaps deserves  more
attention. This review of a potential secondary standard needs to acknowledge that other
standards and regulatory efforts are already underway that have reduced deposition
precursors and will reduce them further in the future. Theoretically, a secondary standard
could be based on a simple determination of what level of exposure is sufficient to
prevent adverse environmental effects, independent of expected future emission levels.
However, it is a relevant policy question whether such standards are needed to prevent
expected future adverse effects or whether current standards and regulatory efforts are
sufficiently protective.

Defining what makes an effect "adverse."

Obviously, a key step in the standard setting process is determining what effects are
adverse. The draft mentions valuation studies as one way to assess how adverse an effect
may be. Although valuation (either monetary or non-monetary) studies provide some
metrics to measure strength of preference, they do not alone provide sufficient
information about what effect may be adverse. Just because an effect has some monetary
value (either use or nonuse value), it is not necessarily adverse.

The draft says little about what other methods may be useful in assessing whether an
effect is adverse. It seems like there may be many ways to assess this from a biological
perspective that would not necessitate valuation. For example, acidification of lakes and
streams to the point that some aquatic species cannot survive in those waters could be
established to be an adverse effect without necessarily having estimates of society's

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monetary valuation for preventing such effects. I think the assessment will have to make
the case regarding what constitutes an adverse effect on the biological level regardless of
what valuation information may or may not be available.

Related to this is, I think, the issue of variations in sensitivity to pollutants in different
locations. Providing all locations the same level of protection may well necessitate
different standards in different locations. Setting a uniform national standard at a level to
protect the most sensitive locations would likely be unnecessarily costly. I'm glad to see
language in the draft that seems to allow for the possibility of standards that vary by
location. However, the assessment process will have to take into consideration the
practical policy implications of the long-range transport of the pollutants in this case.
Meeting a deposition-related standard in one location would necessitate emission controls
in many distant locations and this may limit the practicality of having very fine tuned
location specific standards.

Repairing current injury versus maintaining current quality.

The draft mentions the need to assess how beneficial a standard might be in terms of
preventing or reducing ecological effects. This raises some questions about how the
standard setting process should take into account ecological injury that has already
occurred. With pollutants that bioaccumulate or persist in the system for long periods of
time, it seems that a different standard might be needed in locations where injury is
already significant because lower exposures might be needed to allow recovery to occur.

Critical load/carrying capacity versus full dose-response.

The draft plan describes all the information that would be needed for a full assessment of
the ecological benefits of changes in emissions of NOx and SOx. Although a full
quantitative benefits assessment would be nice, it is going to be very  difficult to do and
may not be necessary. Perhaps standards could be reasonably established based on less
than a full benefits assessment. This might be the case, for example, if thresholds or
limits could be determined based on the amount of exposure a system could tolerate
without suffering adverse effects. This would need to be assessed in terms of ecosystem
services and at what levels of exposure these services could still be maintained by the
system. This would not necessarily require, however, the full quantification of the dose-
response relationship between levels of deposition and levels of environmental response.
The linkages between emissions and environmental effects would have to be sufficient,
however, to establish that there is a causal link between anthropogenic emissions and
adverse environmental effects of deposition.
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Comments from Dr. Ellis Cowling

            Very General Comments on these NAAQS Review Processes

Before dealing with the details of my specific assignment during the October 30, 2007
CASAC Consultation on the Secondary (public-welfare based) NAAQS for NOx and
SOx, I would like to offer a few general comments about these periodic NAQQS Review
processes and the changes that are being made in both the organization and focus of these
reviews.

As described on pages 1-2 of the "Draft Plan" for the NOx and SOx Secondary standards,
the Clean Air Act of 1970 established two general goals for management of air quality in
the United States — protection of human health and protection of public welfare. Section
108 of the CAA directs the Administrator of EPA to identify and list "air pollutants" that
"in his judgment may reasonably be anticipated to endanger public health and welfare"
and to issue  air quality criteria for those that are listed - hence the term "Criteria
Pollutants."

Section 109  of the CAA further directs the Administrator of EPA to propose and
promulgate "Primary" National Ambient Air Quality Standards to protect public health
and "Secondary" National Ambient Air Quality Standards to protect public welfare.

A secondary standard, as defined in Section 109, must "specify a level of air quality the
attainment and maintenance of which, in the judgment of the Administrator, based on
such criteria, is required to protect the public welfare from any known or anticipated
adverse effects  associated with the presence of [the] pollutant in the ambient air ..."  The
welfare effects of concern include, but are not limited to "effects on soils, water, crops,
vegetation, man-made materials, animals, wildlife,  weather, visibility and climate,
damage to and deterioration of property, and hazards to transportation, as well as effects
on economic values and on personal comfort and well-being."

So far, the several Administrators of EPA since 1970 have:
    1)  Identified six specific "Criteria Pollutants" - carbon monoxide, ozone and other
       photochemical oxidants, sulfur dioxide, oxides of nitrogen, particulate matter, and
       lead  - which have thus been designated officially as requiring development and
       implementation of National Ambient Air Quality Standards;
   2)  Emphasized protection  of public health as the principal (and overwhelmingly
       important) de facto focus of concern within the Agency, and public welfare as a
       (rarely openly acknowledged) but distinctly less important de facto focus of
       concern;
   3)  Established Secondary (public-welfare-based) NAAQS standards for all six
       criteria pollutants that almost always were identical in form (including level,
       indicator, statistical form, and averaging time) to the Primary (public- health
       based) NAAQS standards for each of these  six criteria pollutants;
   4)  Developed a long-standing tradition of dealing with these six specific air
       pollutants mainly on a "one-at-a-time" basis rather than collectively - i.e., without
       strong attention to the frequent interactions  and simultaneous occurrence of some
       of these pollutants as mixtures within the air in various  parts of our country;
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   5)  Maintained a reluctant attitude about the concepts of ecologically based "Critical
       Loads and Critical Levels" developed in Europe as possible alternative or
       additional approaches to air-quality management in the US; and
   6)  Maintained a long-standing general focus on the related concepts of:
       a) "attainment counties and non-attainment counties,"
       b) "attainment demonstrations" based on mathematical modeling of a limited
             number of exceedance events under extreme weather conditions, and
       c) "local anthropogenic sources" as opposed to "both local and regional biogenic
             and anthropogenic sources of emissions."

In recent years, in contrast to several of the six ideas listed above, EPA has shown
increased willingness to think more holistically - and in more fully integrated ways -
about both the policy-relevant science and the practical arts of air quality management
aimed at protection of both public welfare and public health. These shifts in both
emphasis and approach have included:
   1)  Participation with other federal agencies and international bodies in discussions
       about the "One Atmosphere," "Critical Loads-Critical Levels," and "Multiple-
       Pollutant-Multiple Effects" concepts;
   2)  Adoption of the "NOx SIP Call" in 1999 and both the "Clean Air Interstate Rule"
       (CAIR) and the "Clean Air Mercury Rule" (CAMR) in 2005 with their more
       balanced perspectives about both regional (interstate) and local sources of
       emissions and interactions among NOx, SOx, VOCs, "air toxics," and mercury in
       the formation, accumulation, and biological effects of "ozone and other
       photochemical  oxidants," and fine, coarse, thoracic,  and secondary aerosol
       particles;
   3)  Recognition of both fine and coarse PM as complex and geographically variable
       mixtures of sulfate-, nitrate-, and ammonium-dominated aerosols; natural
       biogenic and anthropogenic organic substances; heavy metals including cadmium,
       copper, zinc, lead, and mercury; and some other miscellaneous substances;
   4)  More frequent discussion about  of the occurrence and both ecologically-important
       and public-health impacts of mixtures of air pollutants; and, most recently
   5)  The unprecedented decisions to:
       A) Prepare and publish in September 2007 a "Draft Plan for [simultaneous]
          Review of the Secondary National Ambient Air Quality Standards for Nitrogen
          Dioxide and Sulfur Dioxide;"
       B) Include on page 2-1 of this "Draft Plan" a "Proposed Schedule for Joint NOx
          and SOx Secondary Standard Review " with a  "Final Integrated NO2/SO2
          NAAQS Work Plan" in December 2007 to be followed by preparation and
          CASAC review of similarly  integrated NOx/SOx documents including:
             i) an Integrated Science Assessment (ISA) to be issued in December 2008,
             ii) a Risk/Exposure Assessment (R/EA) to be completed by July 2009,
             iii) a Policy Assessment/Rulemaking document prepared in the form of an
                 Advanced Notice of Proposed Rule Making (ANPR) in  August 2009
                 and  Final Rule Making to be completed by  October 19,  2010; and
       C) Separate the preparation and  review of documentation, the required CASAC
          and public reviews, and (possibly also) the final decision-making processes
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          for a Secondary (public-welfare-based) NAAQS from the (previously always
          dominating) Primary (public-health-based) NAAQS review processes.

 Need for Policy Relevancy as the Dominant Concern in NAAQS Review Processes

In a May 12 2006 summary letter to Administrator Johnson, CASAC Chair, Dr. Rogene
Henderson, provided the following statement of purpose for these periodic NAAQS
review processes.

       "CASAC understands the goal of the NAAQS review process is to answer a
       critical scientific question:  "What evidence has been developed since the last
       review to indicate if the current primary and/or secondary NAAQS need to be
       revised or if an alternative level or form of these standards is needed to protect
       public health and/or public welfare? "

During the past 18 months, CASAC has participated in reviews of three of the existing
six criteria pollutants - particulate matter, ozone, and lead. CASAC has also joined with
senior EPA administrators in a "top-to-bottom review" and the resulting recently-
completed revision of the NAAQS review processes. These two experiences have led to
a seemingly slight but important need for rephrasing and refocusing of this very
important "critical scientific question:"

      "What scientific evidence and/or scientific insights have been developed since the
     last review to indicate if the current public-health based and/or the current
     public-welfare based NAAQS need to be revised or if alternative levels, indicators,
     statistical forms, or averaging times of these standards are needed to protect
     public health with an adequate margin of safety and to protect public welfare?"

With regard to the important distinction in purpose of the primary (public health) and
secondary (public welfare) NAAQS standards, it is noteworthy that in all five cases in
which a secondary NAAQS standard has been established, the secondary standard has
been set "Same as Primary."

Thus, a second very critical scientific question that needs to be answered — especially
with regard to the present Joint Review of the Secondary  Standards for NOx and SOx, as
well as the other four criteria air pollutants is:

      "What scientific evidence and/or scientific insights have been developed since the
     last review to indicate whether, and if so, what particular ecosystem components
     or other air-quality-related public welfare values, are more or less sensitive than
     the populations of humans for which primary standards are established and for
     this reason may require a different level, indicator, statistical form, or averaging
     time of a secondary standard in order to protect public welfare."

I hope these two "critical scientific questions" will be borne in mind carefully as CASAC
joins with the various relevant parts of the Environmental Protection Agency in
completing the upcoming reviews of both the primary and secondary National Ambient
Air Quality Standards for NOx and SOx.
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We now have the considerable advantage that a much more complete focus can be
achieved in the Integrated Science Assessment than has historically been achieved in the
encyclopedic Criteria Documents that have been prepared during the years since 1970.

Thus, I recommend that every chapter of the soon to be completed NOx/SOx
Integrated Science Assessment, the Risk/Exposure Assessment, and the Policy
Assessment/Rule Making documents contain a summary section composed almost
entirely of a series of very carefully crafted statements of Conclusions and Scientific
Findings that:
    1)  Contain the distilled essence of the most important topics covered in each
       chapter, and
    2)  Are as directly relevant as possible to the two Critically Important Scientific
       Questions written in bold italic type above.

In this connection, I call attention once again to the attached "Guideline for
Formulation of Statements of Scientific Findings to be Used for Policy Purposes."
These guidelines were developed and published in 1991 by the Oversight Review Board
for the National Acid Precipitation Assessment Program.  They are the best guides that I
know of for formulation of scientific findings to be used for policy purposes.
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                 GUIDELINES FOR FORMULATION OF SCIENTIFIC FINDINGS

TO BE USED FOR POLICY PURPOSES
    The following guidelines in the form of checklist questions were developed by the NAPAP Oversight Review
Board to assist scientists in formulating presentations of research results to be used in policy decision processes.
1) IS THE STATEMENT SOUND?  Have the central issues been clearly identified? Does each statement contain
   the distilled essence of present scientific and technical understanding of the phenomenon or process to which it
   applies? Is the statement consistent with all relevant evidence - evidence developed either through NAPAP
   research or through analysis of research conducted outside of NAPAP? Is the statement contradicted by any
   important evidence developed through research inside or outside of NAPAP?  Have apparent contradictions or
   interpretations of available evidence been considered in formulating the statement of principal findings?
2) IS THE STATEMENT DIRECTIONAL AND, WHERE APPROPRIATE, QUANTITATIVE?  Does the
   statement correctly quantify both the direction and magnitude of trends and relationships in the phenomenon or
   process to which the statement is relevant? When possible, is a range of uncertainty given  for each quantitative
   result?  Have various sources  of uncertainty been identified and quantified, for example, does the statement include
   or acknowledge errors in actual measurements, standard errors of estimate, possible biases  in the availability of
   data, extrapolation of results beyond the mathematical, geographical, or temporal relevancy of available
   information, etc. In short, are there numbers in the statement? Are the numbers correct? Are the numbers relevant
   to the general meaning of the  statement?
3) IS THE DEGREE OF CERTAINTY OR UNCERTAINTY OF THE STATEMENT INDICATED
   CLEARLY? Have appropriate statistical tests been applied to the data used in drawing the conclusion set forth in
   the statement? If the statement is based on a mathematical or novel conceptual model, has  the model or concept
   been validated? Does the statement describe the model or concept on which it is based and the degree of validity of
   that model or concept?
4) IS THE STATEMENT CORRECT WITHOUT QUALIFICATION?  Are there limitations of time, space, or
   other special circumstances in which the statement is true? If the statement is  true only in some circumstances, are
   these limitations described adequately and briefly?
5) IS THE STATEMENT CLEAR AND UNAMBIGUOUS? Are the words and phrases used in the statement
   understandable by the decision makers of our society? Is the statement free of specialized jargon?  Will too many
   people misunderstand its meaning?
6) IS THE STATEMENT AS CONCISE AS IT CAN BE MADE WITHOUT RISK OF
   MISUNDERSTANDING? Are there any excess words,  phrases, or ideas in the statement which are not necessary
   to communicate the meaning of the statement? Are there  so many caveats in the statement that the statement itself
   is trivial, confusing, or ambiguous?
7) IS THE STATEMENT FREE OF SCIENTIFIC OR OTHER BIASES OR IMPLICATIONS OF SOCIETAL
   VALUE JUDGMENTS? Is  the statement free of influence by specific schools of scientific thought? Is the
   statement also free of words, phrases, or concepts that have political, economic, ideological, religious, moral, or
   other personal-, agency-, or organization-specific values, overtones, or implications? Does the choice of how the
   statement is expressed rather than its specific words suggest underlying biases or value judgments? Is the tone
   impartial and free of special pleading?  If societal value judgments have been  discussed, have these judgments been
   identified as such and described both clearly and objectively?
8) HAVE SOCIETAL IMPLICATIONS BEEN DESCRIBED OBJECTIVELY? Consideration of alternative
   courses of action and their consequences inherently involves judgments of their feasibility and the importance of
   effects. For this reason, it is important to ask if a reasonable range of alternative policies or courses of action have
   been evaluated?  Have societal implications of alternative courses of action been stated in the following general
   form?:
     "If this [particular option] were adopted then that [particular outcome] would be expected."
9) HAVE THE PROFESSIONAL BIASES  OF AUTHORS AND REVIEWERS BEEN DESCRIBED OPENLY?
   Acknowledgment of potential sources of bias is important so that readers can judge for themselves the credibility of
   reports and assessments.
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         My Assignment in this CASAC Consultation on the Draft Plan for
    Review of the Secondary Standards for Nitrogen Dioxide and Sulfur Dioxide

My specific assignment in preparation for the October 30 , 2007 CASAC Consultation on
the Draft Plan as outlined in Chairman Ted Russell's memo of 11 October 2007 is — Key
Policy Relevant Issues. These topics are covered primarily in Chapter 3 of the Draft Plan
and are summarized in the five Overarching Policy-Relevant Questions on pages 3-1 and
3-2 and the additional policy relevant scientific questions presented in Chapters 4-6.

Chairman Russell also gave this same assignment to two other CASAC panel colleagues
— Lauraine Chestnut and Rich Poirot. Thus, I am very much looking forward to
comparing notes with both Lauraine and Rich during our Consultation on October 30.

There are many parts of Chapter 3 and other parts of this Draft Plan showing that both
gaseous and particulate forms of the various  oxides of nitrogen and sulfur should be
included among the  "Pollutants of Concern" in this review of the NOx and SOx
Secondary standards.  That is good.

As an ecologist, who is aware of the many different and important adverse public-welfare
effects of both oxidized and reduced forms of reactive nitrogen, I was pleased to find that
section 1.4.3 of Chapter 1 is titled "Ammonia" At first, I thought this might mean that
EPA would be willing to broaden its perspectives about the many, diverse, and very
significant adverse welfare effects of reactive nitrogen pollution by adding ammonia,
ammonium ion, and other reduced forms of reactive nitrogen to the "Indicators of
Concern" in this nitrogen and sulfur NOx and SOx joint NAAQS review.  But my hopes
were quickly dashed by EPA's apparent continuing preference (see page 1-13) to
consider reduced forms of nitrogen almost exclusively in the context of the PM review.

Many of us in the ecological community are  well aware that atmospheric deposition of
nitrogen and sulfur oxides - but also atmospheric deposition of chemically reduced forms
of these same elements (especially ammonia and ammonium ion) — are causing a wide
variety of sometimes beneficial and sometimes adverse effects on terrestrial  and aquatic
ecosystems in many parts of our country.  These effects include:
    1) acidification of lakes, streams, soils, and both  surface and ground waters;
   2) eutrophication of lakes, streams, and  estuaries,
   3) hypoxia in some coastal and marine ecosystems,
   4) changes in biodiversity within some aquatic and terrestrial ecosystems,
   5) changes in reproduction and age-class distributions offish populations,
   6) changes in the nutrient status of forest trees and natural grasslands that sometimes
      lead to increased growth and productivity but sometimes also cause increased
      susceptibility to pest and pathogens,
   7) decreases in  frost hardiness in some forest tree species such as red spruce,
   8) nitrogen saturation of some forest soils, as well as
   9) decreases in  visibility and increases in regional haze in urban and rural locations
      as well as in  scenic vistas in wilderness areas and airports, and
                                        16

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    10) increased deleterious effects on some building materials and historical
       monuments of various types.

These many and varied ecological and other public-welfare consequences of nitrogen and
sulfur pollution provide strong justification for reexamination of the secondary NAAQS
standards for both nitrogen and sulfur. To be sure, inclusion of reduced as well as
oxidized forms of nitrogen and sulfur would require a very significant change in the
"Indicators of Concern" for either or both of the NOx and/or SOx NAAQS standards.

But it is very clear that the wide range of adverse effects listed above fit very well with
the definition of "welfare effects" specified in section 109 of the Clean Air Act — "effects
on soils, water, crops, vegetation, man-made materials, animals, wildlife, weather,
visibility and climate, damage to and deterioration of property, and hazards to
transportation, as well as effects on economic values and on personal comfort and well-
being."

Also, there is a very large body of accumulated scientific evidence about many of the 10
different welfare effects listed above that have been shown to be attributable to exposures
to reduced as well as oxidized forms of both nitrogen and sulfur. In fact, essentially all
10 of the important "Effects of Concern" listed above have been attributed to- or at least
are significantly influenced by- both reduced and oxidized forms of nitrogen. Some of
these same "Effects of Concern" also are influenced by both reduced and oxidized forms
of sulfur. This is true for the 1st, 5th, 6th, 7th, 9th, and 10th effects listed above.  Thus, it
makes much logical sense - and well-justified scientific  sense as well — for EPA to
carefully consider the possibility of broadening the definition of the "Indicators of
Concern" for the NAAQS for NOx and SOx to include both reduced and oxidized forms
of nitrogen — and perhaps also both reduced and oxidized forms of sulfur - as a part of
the presently proposed joint science assessment for the secondary NAAQS for NOx and
SOx.

Section 4.1 of this Draft Plan makes an important and well-reasoned distinction between
how the Agency plans to include welfare effects caused by NOx and SOx "and their
transformation products while still residing in the ambient air" in the secondary PM
NAAQS review, and thus to include in the present "NOx and SOx secondary NAAQS
joint science assessment" the "welfare effects driven by the[se] pollutants or their
transformation products once deposited into the environment."

For all of the reasons outlined above,  many of us in the ecological community continue to
believe that the US and other developed countries of the  world need to consider the
establishment of an integrated total reactive nitrogen approach in air-quality
management.

Such an integrated total reactive nitrogen idea was considered in a 1997 EPA report titled
"Nitrogen Oxides: Impacts on Public Health and the Environment." This document was
prepared by a team of scientists and engineers led by Doug Grano in EPA's Office of Air
and Radiation.  Such an integrated approach was also recommended in a 1998 review
paper titled "Optimizing air quality management in Europe and North America:
Justification for integrated management of both oxidized and reduced forms of nitrogen"
by Cowling et al (Environmental Pollution  102 SI (1998) 599-608).
                                        17

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During the intervening years, a solid foundation of experimental work and periodic
reassessments of integrated total reactive nitrogen approaches have been presented in a
series of peer reviewed journal articles and focused workshop and international
conference reports developed under the auspices of:
 • the 1st, 2nd, 3rd, and 4th International Nitrogen Conferences held in the US and
    abroad,
    the International Fertilizer Industry Association,
    the UN ECE Convention on Long Range Transboundary Air Pollution (LRTAP),
    the European Commission's Clean Air for Europe program (CAFE),
    the Nordic Council of Ministers, and
    the International Nitrogen Initiative (INI).

The International Nitrogen Initiative (www.initrogen.org) was started in 2002 as an
outgrowth of the 2nd International Nitrogen Conference. An integrated nitrogen approach
and management of nitrogen was proposed in the Nanjing Declaration, which was an
outgrowth of the 3rd International Nitrogen Conference held in Nanjing in 2004.

The following peer reviewed articles and both workshop and conference reports provide
important parts of the scientific background for consideration of integrated total reactive
nitrogen strategies:

Erisman, J. W., W. de Vries, H. Kros, Oene Oenema, L. van der Eerden, H. van Zeijts,
   and S. Smeulders. 2001.  An outlook for an integrated nitrogen policy.
   Environmental Pollution and Policy 4:87-95.

Galloway, J.N., J. D. Aber, J.W. Erisman, S.P. Seitzinger, R.W. Howarth,  and E.B.
   Cowling. 2003.  The Nitrogen Cascade.  Bioscience 53:341-356.

Erisman, J. W., P.  Grennfelt,  and M. Sutton. 2003.  The European perspective on
   nitrogen emission and deposition. Environment International 29:311-325.

Erisman JW. 2004.  The Nanjing Declaration on management of reactive nitrogen.
   BioScience 54, 286-287.

Erisman, J.W., N. Domburg, W. de Vries, B. deHaan, B., and K. Sanders. 2005. The
   Dutch N-Cascade in the European Perspective. Science in China Series C. Life
   Sciences, 48(1): 1-10.

Erisman, J.W.  2007.  Nitrogen and the Convention on Long-Range Transport of Air
   Pollution.
   http://asta.ivl.seAVorkshops/Saltsiobaden3/Background%20material/JWE_nitro.gen%
   20and%20clrtap.doc

Erisman, J.W., T. Spanger, M.A. Sutton, C. Askelssson, S. Amin-Hansjani, H.V.
   Anderson, H. Apsimon, S. Belyazid, H. Fagerli, H. Harmens, M. Havlikova, J.P.
   Hettelingh, K. Hicks, L. Horvath, N. Hutchings, M. Maasikmets, M. Maione, S. Reis,
   and C. Stenby.  2007.  Nitrogen - integrated environmental policies. Working Group
   5 Report, http://asta.ivl.se/Workshops/Saltsjobaden3/Conclusions/WG5.pdf'
                                       18

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Grennfelt, P., L. Lindau,. and J. Arnell. 2007. Air pollution and its relationship to
   climate change and sustainable development: Linking immediate needs with long
   term challenges. Main Conclusions from "Saltsjobaden 3" Workshop, Goteborg,
   Sweden, 12-14 March 2007.
   http://asta.ivl.seAVorkshops/Saltjoboden3/Conclusions/Salt3_Final_conclusions_rev8
   juni.pdf

Sutton, M.A., J. W. Erisman, and O. Oenema. 2007. Strategies for controlling nitrogen
   emissions from agriculture: Regulatory, voluntary and economic approaches.
   International Fertilizer Industry Association International Workshop on Fertilization
   Best Management Practices, Brussels, Belgium. March 2007.
   http://www.fertilizer.org/ifa/publicat/bap/2007_brussels_fbmp.asp

Only one of these peer reviewed publications and detailed workshop and conference
reports are included among the References listed in Chapter 7 of the Draft Plan for
Review of the Secondary NAAQS  for NOx and SOx.

It is important to note that these emerging ideas about the need for an "integrated total
reactive nitrogen" approach also led to a recent decision by the Science Advisory Board
(SAB) of the USEPA to establish a special committee of the Board to make a thorough
study of reactive nitrogen and its effects on public health and welfare. This committee is
titled the Integrated Nitrogen Committee (INC).  It has been at work for most of the past
year and is led by Dr. James Galloway of the University of Virginia. The 18 current
members of the INC include a carefully selected group of scientists and engineers with
broad experience in both air quality and water quality aspects of nitrogen pollution and its
management.

It is also noteworthy that during the 2007 "Solsjobaden 3 Workshop" cited above, the
USEPA joined with other LRTAP signatory organizations in proposing that a "Taskforce
on Integrated Nitrogen" should be established within the LRTAP Convention to explore
integrated reactive nitrogen strategies under the auspices of the LRTAP Working Group
on Strategies. In April 2007 the Executive Body of LRTAP decided to implement this
proposal in 2008 with leaders from the UK and the Netherlands as co-chairs. This is the
first time that an integrated nitrogen approach has been approved for consideration on a
political level.

           Other Suggestions for Improvement of the Secondary NAAQS
                      NOx and SOx Documents Yet to Come

Finally, permit me to offer the following additional suggestions for improvement of the
Integrated Science Assessment, Risk/Exposure Assessment, and Policy
Assessment/Rulemaking documents to be completed with the present Draft Plan as an
initial guide:

   1)  The term "acidic deposition" used frequently in Chapter 1 should be replaced by
       the more accurate term "acidifying deposition" or at least the less misleading term
       "acid deposition." Gaseous ammonia, ammonium ion, and both ammonium
       sulfate and ammonium nitrate are all acidifying substances even though some are
       not acidic when they are being deposited from the atmosphere into ecosystems.
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   2) The answers that will be given to the well-formulated and well-focused
      "overarching policy-relevant questions" listed on pages 3-1 and 3-2 in Chapter 3
      and the more detailed "policy-relevant questions" listed on pages 4-4 and 4-5,
      pages 5-5 and 5-6, and page 6-3 will inevitably be incomplete and or misleading
      with regard to quantitative interpretation of the causal "Pollutants of Concern"
      and the principal "Effects of Concern" if gaseous ammonia, ammonium ion, and
      other reduced forms of reactive nitrogen in both wet and dry deposition are not
      included in the science assessment, risk assessment, and proposed rulemaking
      documents.
 Resolution from the Integrated Nitrogen Committee of the Science Advisory Board
 for Consideration by the CASAC Secondary NAAQS NOx and SOx Review Panel

During the ongoing meeting of the EPA Science Advisory Board's Integrated Nitrogen
Committee (INC) — meeting at SAB Headquarters in Washington DC on October 29-31,
2007 — the several members and Chair of the INC, Dr. James Galloway of the University
of Virginia, asked me (as the CASAC-designated liaison person to the Science Advisory
Board's Integrated Nitrogen Committee) to present the following Resolution (which was
developed and approved by the INC) for consideration during the  CASAC review of the
NAAQS for NOx and SOx during our CASAC Conference Call Consultation on October
30, 2007.

Resolution

The current air pollution indicator for oxides of nitrogen, NOx, is an
inadequate measure of  reactive nitrogen in the atmospheric
environment. The SAB's  Integrated Nitrogen Committee
recommends that inorganic reduced nitrogen (ammonia plus
ammonium) and total oxidized nitrogen, NOy,  be monitored  as
indicators of total chemically reactive nitrogen.
                                    20

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Comments from Dr. Douglas Crawford Brown

I am generally supportive of the plan laid out here. This is in part because it is only a
sketch of what will be done, and so there is little with which I might disagree with respect
to details, but also because I think the choices made are wise ones. I agree with the plan
to focus on gaseous phase contaminants since the particulate ones are include in the PM
assessment, although I believe it will be VERY difficult to separate out the effects of the
gaseous and particulate phase NOx and SOx. I agree with the effects being considered,
including the decision to reflect both direct effects and effects on natural services
(although the latter is by far the more contentious of these two classes of effects). The
stages of the assessment are also properly outlined.

I have some specific comments to offer at this point:

1.1 agree with the decision, outlined on pages 1-7 and  1-8, to bring NOx and SOx into a
linked assessment, as it will not be possible (I believe) to separate their effects in any
studies. But I also mentioned above that it will prove equally difficult to separate the
gaseous and particulate phase effects.

2.1 was not completely clear, even after reading the document several times, how
atmospheric and non-atmospheric loadings will be assessed and incorporated into the
analysis. This includes the difficulty of separating their attributable risks in the ecological
studies that have been conducted. But I agree with the need to focus on the atmospheric
loading, so long as this also includes loadings onto a surface that are then washed to an
ecosystem through run-off

3. On page 1-12, it seems to me that there is an assumption (lines  12-18) that all
ecosystem changes that cause a  shift in species are adverse. I don't agree with this, and
this will be a central question when the assessment is performed.

4.1 liked the fact that the review is to be focused around a series of "policy relevant
questions" (as  stated on page 3-1 at the top). This is a wise choice because it will result in
a document that can serve as the basis for subsequent parts of the NAAQS process. The
particular issues described later in that paragraph are also the appropriate ones.

5. Later on page 3-1, shouldn't the questions all make reference to "gaseous phase
ambient..." rather than the larger "ambient"?

6. In the questions at the top of page 3-2, the authors mention "effects we are trying to
protect..." I assume they mean "effects we are trying to protect against".

7. On page 4-1, it is claimed that thousands of papers will be evaluated. I rather doubt
this. On page 4-2, some of the search terms are "terrestrial ecosystems", aquatic
ecosystems", etc.  These will return very large pools of studies, and so I wonder whether
they shouldn't always be paired by NOx  and SOx in the search.
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8. The criteria on page 4-3 are good, although I note that criterion 6 is both the most
important and by the far the most difficult to specify procedurally.

9. On page 4-4, there is mention (and on other pages later) of climate change. It was not
clear whether this was being included to try to assess impacts in the future. If so, it must
also be noted that climate change will change transport patterns for pollutants.

10.  There are very strong reasons economists give for not believing procedures that
estimate the economic values of natural services (as they have discussed with respect to
the  kind of assessments performed by Bob Costanza). The Agency should be prepared to
offer some counter arguments to these critiques. Most of the critiques center on the fact
that existing natural services valuations are not actually rooted in market phenomena.

11.  On page 5-1, lines  19 and 20, the claim is made that the Administrator must make the
final decision as to whether a given effect is significantly adverse to warrant changing the
standard. While I might agree with this to some degree, I question whether the policy side
will understand the science well enough to know HOW adverse a given ecological effect
is. The science papers must present this case as well, from a scientific perspective.

12.  On page 5-2, the authors ask "To what degree can assumptions be made..." I don't
know what this means. Assumptions can always be made. I presume they mean "To what
degree are assumptions supported by the available science"?

13.  On page 5-3 (line 22), the  authors mention normalizing all ecosystems. I have no idea
what this means. It is not the proper phrase.

14.  On page 5-4 (lines 25-30), the discussion of overlaying deposition and impacts in GIS
seems to me much too simplistic. At the least, some sort of spatial correlational
methodology will be needed.

15.  On page 6-1, lines 21-31, the issues being raised appear to me all science questions,
not policy questions. But the bulleted questions presented on the next pages of this
chapter are the appropriate ones for the policy maker to ask of the science..
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Comments from Dr. Charles Driscoll

I appreciate the opportunity to comments on the EPA Draft Plan for Review of the
Secondary National Ambient Air Quality Standards for Nitrogen Dioxide and Sulfur
Dioxide. I received this document late (only yesterday).  The advantage is that I have had
the opportunity to read everyone else's comments. Many of the comments and thoughts
that I have are similar to those of others on the panel.

In general I am supportive of the document and approach. Some of these comments
amplify some of the comments of others on the panel.

Reduced nitrogen. I agree with the comments of many of the committee members that
reduced nitrogen should be included in the assessment. Reduced nitrogen species (NH4+,
NH3, organic N) make substantial contributions to particulate matter in the atmosphere
and to the total nitrogen loading to ecosystems. Given the magnitude of these
contributions it seems that we should consider these  emissions and deposition as part of
this assessment.

Linked assessment of nitrogen and sulfur emissions.  I also agree with the comments
of many of the panel members that I very much support the linked assessment of sulfur
and nitrogen deposition, as there are similar pathways for these materials and
acidification effects are related to the combined impacts of sulfur and nitrogen. That said
in addition to acidification effects, there are fertilization effects associated with nitrogen
that need to be assessed separately.  Another issue that may challenge the linked
assessment of sulfur and nitrogen may be how well the science is developed for each of
these elements. I may be off base here but my sense is that the science may be more
definitive for sulfur effects than nitrogen effects.  This may be due to the longer residence
time of nitrogen in ecosystems and the more complex ecosystem cycling of nitrogen.

National vs regional control strategies. I agree with some of the panel members that
there may be some advantages associated with a regional approach to air quality
management in the U.S. concerning ecosystem effects. This approach was suggested by
the NRC (2004). However, there also appear to be disadvantages to this approach.  I am
specifically thinking about the recent NOX Budget Trading Program (NBP) to control
NOx emissions in the eastern U.S.  I believe that this rule was directed to control ozone
in the East. However, there is a fair amount of scientific literature suggesting nitrogen
deposition effects on the West. While there are some advantages associated with these
regional rules they rule the risk of ignoring  environmental issues in areas of the country
where emissions are not controlled.

Positive vs negative effects.  I endorse Dale Johnson's comments about positive and
negative effects. It is difficult to pass judgement on what are positive and negative
effects.  I think we should simply document change and let others decide what are the
positive and negative effects.
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Extent and rate of recovery. One issue that I can imagine that will be difficult to
address is the extent and rate of "ecosystem recovery" following reductions in emissions.
There is a wide range of sensitivity of ecosystems to inputs of atmospheric sulfur and
nitrogen deposition. With respect to acidification many ecosystems are naturally acidic
due to inputs of organic acids. In addition, the long-term monitoring studies and
modeling studies suggest that the recovery of ecosystems following reductions will occur
over extended time scales (e.g., many decades). These two interrelated considerations
will challenge our ability to establish secondary standards for sulfur and nitrogen. Some
ecosystems are  so sensitive that it is unlikely that they will ever "recover" from emission
reductions. Likewise, the recovery period for some ecosystems will likely be so extended
that this will create a difficult situation.

Methylation of mercury.  There is a bit of text on the linkage between methylation of
mercury and sulfur deposition, but this effect and relative pH effect on fish should be
addressed in the assessment.

Specific comments

1-9, line 28  I don't like the term occult deposition.  Can this be changed to cloud and fog
deposition?

1-9, line 31  Should this be biogeochemistry?

1-9, line 32 and below. Font change?

1-11 Figure title. Should the figure title be in caps or lower case?

1-11, line 12  Change levels to concentrations.

1-12, line 5  Decreases in available base cations...

1-12, line 11 and elsewhere Should section titles be in caps or lower case.

1-12, line 21  On an annual basis, atmospheric nitrogen deposition  may contribute up to
40%....

1-12, line 22-24. I do not understand these sentences.

1-12, line 29. ... addition, increasedphytoplankton growth in the water column and on
surfaces can attenuate light causing declines in submerged...
                                        24

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Comments from Dr. Paul Hanson

I found the draft plan to be a concise yet fully developed plan for the review of the
policy-issues, science, and risk/exposure/policy assessment of the welfare effects of NOx
and SOx. The following comments provide editorial comments and address some specific
issues that should be considered in the implementation of the final plan.

Specific comments:

Pages iv and v:
In the listing of terms the EPA might denote which terms represent legal definitions
within the context of the Clean Air Act or other regulatory statutes versus those that are
scientific consensus definitions.
The definition of biologically relevant indicator should be expanded and clarified.  As I
read it I wondered if it might alternatively be a measure of organism response to a
stressor (essentially the opposite of what is presented)? On the other hand, if it is
intended to denote an indicator of pollutant occurrence or exposure to which biological
system are known to respond this should be clarified.  Is a biologically relevant indicator
the generic version of the chosen statutory 'form' of NAAQS standards?

Page 1-1 lines 16  and 17 (also relevant to  1-8 line 20):
       To avoid missing key science products that might be relevant to the current
evaluation of NOx science, the current science reviews should go back prior to 1995 to
around 1991. Much of the research summarized in the previous NOx Air Quality Criteria
Document was written and summarized several years prior to the final publication data of
1995.

Section 1.4
       Somewhere in this section the fertilization potential of forms of N deposition for
terrestrial ecosystems should be acknowledged.  An evaluation of the impacts of N
deposition on organisms and ecosystems will need to recognize that N-deposition
responses through time can proceed along a continuum of response from growth
enhancing fertilization to growth depressing conditions associate with advanced level of
N inputs. Excess  N-deposition results when available N can't be assimilated by existing
vegetation or immobilized via soil buffering capacities.

Figure 1-1 should include plant fertilization as an end point.

Section 1.4.2
       The concept of 'excess N'  demands a comprehensive understanding of the
biogeochemical cycle of N that will be location specific and able to capture complex
interplay between biological productivity and N uptake potential and the biogeophysical
processes that  store and release forms of N and acidity in soils. A key question for the
science assessments will be — Do current models have the capacity to handle this
complexity?
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Section 4.1
       Similar to the manner in which this section deals with NOx and SOx contributions
to participate matter issues (it is summarized elsewhere), Section 4.2 should also describe
the issue of NOx as a tropospheric ozone precursor. I assume that such a summary
statement would conclude that NOx as an ozone precursor is/ handled and discussed in
the context of the recent review and AQCD for photochemical oxidants.  The dominant
role of NOx as an ozone precursor may, however, still be relevant in the context a
standard  setting process for NOx  and perhaps shouldn't be completely excluded during
this review.

Page 4-4 lines 25 and 26:
       This statement seemed vague. I wasn't sure of the intent.

Page 4-5 lines 1 to 16:
       A separate bullet on the nature and impacts of wet and dry deposition might be
highlighted. Some forms of wet and dry (gaseous) deposition have direct access to
biologically active plant interiors through  surface or stomatal uptake. This pathway
should be contrasted with the soil-mediated pathway for biological response.

Section 5.3
       Section 5.3 and the questions it raises are very important and should be fully
evaluated by EPA and vetted in the review processes.  As with other criteria pollutants, it
is an unfortunate fact that funding for the continued development of mechanistic
understanding of welfare effects is limited. A  comprehensive description of critical data
gaps and research needs is essential to justify and prioritize future research needs for NOX
and SOX welfare effects.
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Comments from Dr. Rudolf Husar

Overall, the draft  review plan for the Secondary NAAQS  for NOx and SOx is sound and
executable. In particular, the combination of NOx and SOx review process is commendable.  In
essence, such an integrated review plan is consistent with the multifaceted nature of welfare
impacts. Also,  dividing the review  into the four activities: integrated review plan, science
assessment, risk assessment and policy assessment is appropriate. Below are specific comments
and suggestions regarding the draft plan:

Linking of Science, Risk and Policy  Assessments:
       In the review process, additional consideration should be given to the interaction between
the science, risk and policy assessments. In past NAAQS assessments, these three assessments
were  conducted somewhat  independently following a  linear  causality  chain:  (1)  Science
assessment determines the nature of the pollutants and their effects; (2) Risk assessment draws
on the science to quantify the risk: Policy/Regulation is then developed based on the science and
risk assessments.   However,  policy  making  includes many other considerations beyond the
science and quantitative risk assessment. Therefore, in developing a policy-relevant science and
risk assessments could benefit from  a more iterative approach among these assessments.  For
example, the selection of appropriate indicators might be influenced by the policy options that
are being considered.

Comments on Science Assessment:
    •  In updating the  observational evidence  since the last NAAQS  science review, special
       consideration should be given for the new satellite-based observations  of NO2 and to a
       lesser degree SO2.
    •  Similarly,  the  observational  databases from  surface  monitoring networks should
       incorporate new data from the aerosol Speciation, AIRNOW and NOy networks.
    •  The above new observations  are of  particular importance  for  the validation and
       improvement  of the  regional  chemical  transport  models used  in  the  assessments
       (CMAQ).

Comments on Risk/Exposure Assessments:
    •  The heavy reliance on CMAQ model  for assessment necessitates the validation and
       improvement of the CMAQ model performance.  The marginal performance of CMAQ
       for non-sulfur species suggests considerable room for improvement.
    •  The statistical  analysis to  generate concentration-deposition  relationships is unclear.
       Providing further rationale for the approach would be beneficial.

Comments on Policy Assessment:
       As indicated earlier, the policy assessment could provide considerable guidance on both
identifying policy  relevant science,  as well  as policy-relevant risk assessment.   Therefore,
making the policy assessment  more  transparent  and  also more  closely  linked  to  other
assessments would be desirable.
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Comments from Dr. Dale Johnson

I have reviewed the Draft Plan for Review of the Secondary National Ambient Air
Quality Standards for Nitrogen Dioxide and Sulfur Dioxide, and I have some substantial
problems with this document as written. Specifically, I find that the tone is entirely biased
toward the negative impacts of both SOx and NOx, whereas we have known for decades
that there are positive effects as well. I am more than a little amazed that these
considerations continue to fail to make it into review papers and documents like this. In
particular, I find absolutely no reference to the possibility that increased deposition of
NOx, which delivers the one nutrient most commonly limiting to terrestrial vegetation, to
increased growth and/or ecosystem "health". This possibility has been raised many times
in various reviews (including some of my own, which I am not pushing here, as they are
now quite old). I can refer you to two publications that have appeared on the scene since
the 1990's that I think are particularly significant. Kauppi et al (1992) evaluated forest
mensurational  data for Europe over the period  1970 to 1990, and found, contrary to what
we were being told in the 1980's, that the growth of European forests had been
increasing, not decreasing, over this period. They  speculated that this could be due to
better silviculture, increased nitrogen deposition, and perhaps increasing levels of
atmospheric carbon dioxide. More recently, Magnani et al (2007) concluded that forest
net carbon sequestration in the Northern Hemisphere "is found to be overwhelmingly
driven by nitrogen deposition, largely the result of anthropgenic activities" Given
the high visibility of increasing atmospheric carbon dioxide levels and climate change, I
am amazed that this kind of consideration is lacking in the document. Yes, one could
argue that the Magnani article is too new to have made it in yet, but there is the Kauppi
article as well as several other older ones suggesting that N deposition enhances forest C
sequestration (see the Magnini article for these references). To be even handed, the report
should also consider the Nadelhoffer et al (1999) article, which dismisses the possibility
of nitrogen deposition increasing forest growth by contending that it is mostly tied up in
the soil, given  our experience in fertilizer studies.  (I personally dispute that, as nitrogen
deposition, unlike fertilizer applied nitrogen, can be directly taken up by foliage.)

I make these statements with absolutely no political axe to grind at all -1 am NOT anti-
environmentalist, and I am NOT in favor of allowing pollutants to run rampant. And I
most certainly  do not deny the existence of N-saturation and negative effects of too much
N deposition -1 have seen such things in my own research. My only motivation is that
this document  give a balanced view of the effects  of these pollutants and consider both
the pluses and  minuses of them. I have been making the  same point in various meetings
and reviews  for a couple of decades now. To not do so is to invite even more scathing
review comments from its detractors at a later time.

Specific Comments:

p.  1-10, lines 5-8: Fertilizer is mentioned here, but only in a negative context - why do
you suppose that people bother to manufacture fertilizer then? To poison the environment
or to promote positive growth responses?
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p. 4-2, lines 24-26:1 believe that the key words should include "sulfur" and "nitrogen" as
well. The key words listed here will automatically steer toward negative pollutant effects
and leave out basics.

p. 5-3, lines 21-32: This section comes the closest to an objective evaluation in that it
least considers the potential for nitrogen uptake.

p. B-9, lines 11-23:  Should include potential increases in C sequestration here.

p. B-14, Diagram: Amazing that the "Altering plant nutrients" box mentions Ca, but not
N! "Altering of Production" "Food and Fiber" and "Carbon sequestration" are all shown
here, but given that the only reference is to Ca (presumably in a negative context), I
presume that only negative effects of N on all these  results are being considered.

p. B-16, Diagram: This diagram makes the most sense of anything I have seen so far -
crop (or forest) yield increases with N fertilization, but, inevitably, so does nitrate
pollution. This is the kind of balance that ought to be present in the entire document.

References:

Kauppi, P.E., Mielikainen, K. and Kuusela, K., 1992. Biomass and carbon budget of
   European Forests,  1971 to 1990. Science, 256: 70-74.
Hogberg, P. 2007. Nitrogen impacts on forest carbon. Nature 447: 781-782.

Magnini, F., Mencuccini, M., Borghetti, M., Berbigier, P, Beringer, P., Delzon, S.,
   Grelle,  A., Hari, P., Jarvis, P.O., Kolari, P., Kowalski, A.S., Lankreijer, H. Law. B.E.,
   Lindroth,  A., Loustau, D., Giovanni, M., Moncreiff,  J.B., Rayment, M., Tedeschi,  V.,
   Valentini, R. and Grace, J. 2007. The human footprint in the carbon cycle of
   temperate and boreal forests. Nature 447: 848-850.

Nadelhoffer, K. J., B. A. Emmett, P. Gundersen, O.  J. Kj0naas, C. J. Koopmans, P.
   Schleppi,  A. Tietema, and R. F. Wright.  1999. Nitrogen deposition makes a minor
   contribution to carbon sequestration in temperate forests. Nature 398:145-148.
                                        29

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Comments from Dr. Donna Kenski

Overall, this was an excellent plan for moving forward with a comprehensive review of
NOx and SOx effects on ecosystems. It was well written and logically presented.  I
thought the posing of policy relevant issues in Sec. 3 was particularly well done.  There
were two significant shortcomings that I hope are addressed in the ISA. First, this plan
didn't explicitly mention any assessment of the spatial scales of susceptible ecosystems.
Some ecosystems and parts of the country are more vulnerable than others to the effects
of acidification and deposition.  These should be clearly identified and their degree of
susceptibility depicted, ideally with maps.   Conceivably, a secondary  standard for
deposition might be different for various parts of the country, to adequately protect
sensitive ecosystems but allow flexibility for regions with more ecological resilience.
The whole process is crying out for a GIS analysis that could overlay and really integrate
the deposition data with the ecosystem data, emissions data, valuation data, etc. - i.e.,
build an atlas of relevant information. Once that information is gathered together, GIS-
based spatial analysis tools can be used to extract many more insights  from the collection
of data. Note that uncertainty in this spatial information can be incorporated into this
kind of analysis. Section 5.3 does mention that a GIS approach will be used, but almost
as an aside. It should play a much more central role in the presentation and integration of
findings in the ISA.

Second, I'm confused about the extent to which NH3/NHx will be addressed in the ISA.
It rates a paragraph in section 1.4.3 that announces it will be 'considered', but then it is
barely mentioned again.  It is unrealistic to consider acidification effects  of NOx and
SOx without NHx, which also plays an important role in acidification. Because the
chemistry of NOx and SOx are inextricably linked to NHx, it needs to be  addressed
explicitly.  I do not believe that it can be dismissed by noting that its role  in aerosol
formation will be addressed in the PM ISA. It plays an important role in total nitrogen
deposition that has to be discussed in detail  here, in the context of all the important
species.  It may well be that a more  suitable secondary standard includes  all nitrogen
species, not just NOx; thus to leave it out of the ISA process would be a serious omission.

Science Assessment, p. 4-1, 2nd and 3rd paragraphs:  It's not very clear how this
organization of the annexes will be done, with respect to summarizing the thousands of
studies. There is bound to be  a good deal of overlap among studies (since some studies
will address more than one effect being summarized—e.g., both acidification and
nonacidification effects) so having a well-thought out plan for presenting  these that
minimizes duplication among the various annexes would be useful.  Another suggestion
is to be rigorous in separating the discussion of new data from the review of old studies -
this was a minor shortcoming CAS AC identified in the recent review of the NOx primary
ISA that could be avoided here.

Section 4.2.2:  These criteria for evaluating the studies are eminently reasonable.  I would
urge the authors to err on the side of being more selective, rather than  more inclusive, to
keep the ISA and annexes to a manageable size if there really are thousands of studies to
review.
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p. 4-5: Is there a particular significance to the underscored text?  Item 2.g needs to be
reworded; insert 'and' between pollution and variations?

Sec. 5 and App. B:  In several places this plan emphasizes that the Administrator will
make the final decision on the standard and judge whether an effect is significantly
adverse, factoring in the inherent uncertainty in the information. Yet there doesn't seem
to be a clear plan for describing and quantifying uncertainty at the various stages of this
process, integrating that uncertainty across the process, or for clearly identifying what is
and isn't an adverse effect.  Reasonable people might disagree about what constitutes an
adverse effect and how to value it - nitrogen deposition on a farm field might be seen as
favorable, while the same nitrogen deposition on an adjacent forest might be considered
adverse.  The information in Appendix B on ecosystem  services and valuation presented
an interesting framework for beginning to make these assessments, but it wasn't clear
who gets to make the valuation decisions. Is EPA planning to conduct a survey?  Or is
this data that's already been collected? If the valuation part of the assessment is carried
out correctly, it shouldn't be up to the  Administrator to judge whether an effect is adverse
or not. The point of the exercise is to take this judgment out of the policy realm and
apply a quantitative and nonsubjective method to determining value.

Sec. 6: Does this first paragraph (p. 6-1) mean that discussion of the possible form of the
standard won't be discussed in the ISA or REA?  If so, that is a distinct shortcoming.
Analysis of the many options for regulating deposition needs to be part of the ISA. There
is no reason to put it off to the last part of the process. It is nice to see that total  nitrogen
is considered as a possible indicator, and that the seasonal variability of deposition might
justify a seasonal standard;  temporal variability was only briefly mentioned in the rest of
the plan and yet it might be an important risk driver.  Similarly, as I noted above, it seems
reasonable to think that a standard might differ regionally due to broad differences in
ecosystem  susceptibility. This concept is touched on as well on p. 6-3, but the sooner
these possible forms of the  standard are discussed the better.

Appendix B:  This was a helpful description of the various tools, but it's not clear how
they all fit together, since the models cover a broad range of spatial and temporal scales.
Perhaps a schematic of the modeling process would be useful.

p. B-5: Not clear why this section on AIRQuest is here, whether AIRQuest exists, or
whether it is being developed as part of this process.  In any event, a database of national
air quality monitoring data  already exists (EPA's AQS). However, it does not include
much data on non-criteria species  like  NH3, NO, NOx, etc.  Those might need to be
gathered from other sources. In particular, data from Canada might be useful, as well as
satellite observations or special study data.  The Midwest RPO has collected ambient
NH3 data for several years.

p. B-14, line 18: what is WTP?
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Comments from Dr. Myron Mitchell

GENERAL COMMENTS

The document generally does a very good job of developing a protocol for developing
secondary national ambient air quality standards for nitrogen dioxide and sulfur dioxide.
The rationale for evaluating concomitantly the interactions of nitrogen dioxide and sulfur
dioxide needs to be separated with respect to atmospheric versus other ecosystem
processes.  Examining together sulfur and nitrogen chemical  species in the atmosphere
due to the important linkages of these chemical species is a useful approach.

Careful attention will be needed for quantifying the differential effects of nitrogen and
sulfur atmospheric inputs on ecosystem response.  The interactions of nitrogen and sulfur
inputs in affecting soil, microbial and plant processes differ between these elements.
Their respective biogeochemical transformations and fluxes are relatively  distinct from
each other. It will be challenging to develop appropriate metrics that capture the essential
ecosystem features that determine: 1) whether nitrogen and sulfur inputs by atmospheric
deposition will be lost or retained; and 2) the influence of these two elements and their
different chemical species on other factors including recovery from acidification and loss
of nutrients. This will be particularly important for evaluating long-term effects on the
availability of base cation nutrients including calcium and magnesium.

The current document does not clearly address which soil chemical and physical
characteristics need to receive particular attention in the development of standards and
how spatial variation in these characteristics will be incorporated in the determinations.
For sulfur, attention will be needed on the adsorption/desorption responses in soils. In
addition, the contribution of any internal S sources (both organic sulfur mineralization
and inorganic sulfur mineral weathering) to sulfate fluxes in soil and the resultant
differences in responses to decreases in sulfur deposition in surface and ground waters
will need some consideration.  In contrast for nitrogen, more attention will need to focus
on what soil features including how organic matter quality affects microbial processes.
This assessment will also need to be linked to the role of vegetation both with respect to
nitrogen cycling, but also in affecting organic matter quality via organic matter inputs to
the soil.

It will be critical to look at other factors including climate change, invasions of exotic
species and the alterations of species composition (especially wood vegetation) that will
be occurring concomitantly with changes in atmospheric deposition of sulfur and
nitrogen.  Such considerations will be needed to help  clarify other factors that will be
separating how other long-term trends are influencing ecosystem response.

Information is provided on the CMAQ (Community Multi-Scale Air Quality) model
especially in Appendix B.  A clear delineation of how the CMAQ model compares and/or
differ from other models including that being used by CASTNET for estimating
deposition at individual sites would help unify various approaches that are evaluating
atmospheric deposition. It may also be useful to include some review of how these
                                         32

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efforts compliment or differ from efforts in other regions including those taking place in
Europe.

The consideration of ecosystem services as a factor to be evaluated in developing the
standards could be helpful.  However, it will likely be necessary to clearly identify early
in the process of developing these new standards those services that are most relevant
with respect to the effects of nitrogen and sulfur deposition.

DETAILED COMMENTS

Page 1-2, line 7: "whose" should generally be reserved for reference to individuals.
Replace with "of which".

Page 1-3, line 9: subscript x

Page 1-5, line 6: insert "ic" (acidic vs. acid)

Page 1-6, line 6: where is the beginning of the quoted statement?

Pagel-8, line 1: subscripts here and throughout document.

Page 1-9, line 2: add an "s" to detail

Page 1-9, linelS: replace "Once" with "After" and "complete" with "completed"

Page 1-9, line 28: replace "or" with "and"

Page 1-9, line 30: consider "Deposition of other chemical species..."

Page 1-9, line 31: replace "biochemistry" with "biogeochemistry"

Page 1-9, line 32: from this point on the font changes through line 8 of page 1-10.

Page 1-10, lines 1-3: consider separating these statements to read as
       "Acidification results in a cascade of effects that alter biogeochemical cycles and
       harm terrestrial and aquatic ecosystems.  These effects include slower growth, the
       death of forest vegetation, and ..."

Page 1-10, line  5: replace "such as" with "including"

Page 1-10, line  8: disease is a very general term. Either be more specific or delete.

Page 1-11:  in the figure also include the charge on SO4 for soil processes.

Page 1-11, line  9: should read "Acidic deposition"
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Page 1-11, line 12: consider "toxic to both terrestrial and aquatic biota"

Page 1-12, line 1: consider "organisms" vs. "species"

Page 1-12, line 7: could read "in the case of Ca, Mg and K, the role of these essential..."

Page 1-12, line 8: could read "... nutrients especially in comparison with Al
concentrations have..."

Page 1-12, line 15: change to "more nitrogen-limited"

Page 1-12, line 16: could read "... changes in the ability of invasive species to
colonize..."

Page 1-12, line 20: "that is ultimately..."

Page 1-12, line 23: replace "places"  with "locations"

Page 1-12, line 24-25: could read "... ecologically important, may play a more important
role than indicated by the annual average concentrations."

Page 1-12, line 28: could read "other population changes which can cascade throughout
the food web."

Page 1-12, line 29: omit "off

Page 1-12, line 30: "...which serves as an important..."

Page 1-13, line 7: replace "nitrogen" with "ammonium"

Page 1-13, line 10: replace "gives" with "increases"

Page 3-1, line 4: could  read "In this review of the ecosystem-related effects on public
welfare related to NOX  and SOX.

Page 3-1, line 6: replace "the" with "this"

Page 3-1, line 16: insert comma after "i.e."

Page 4-3, 4.2.2 includes questions so should this paragraph end with a question mark?
Page 5-3, line 9: "correlation" would suggest a somewhat weak statistical approach.
Consider changing to "relationships"

Page 5-3, line 10: This  would suggest a strong approach; see previous comment.

Page 5-3, line 12: insert comma after "i.e."
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Page 5-3, line 28: What is implied by soil type and characteristics? Wouldn't it be better
to use the more general term of "soil properties"?

Page 5-3, lines 30-31: should read "... characteristics, which may help assess
sensitivities, include..."

Page 5-4, line 2: omit "a"

Page 5-4, line 26: replace "numerical" with "simulation"

Page 5-4, line 30: insert comma after "i.e."

Page 5-5, line 12: should read "Can deposition models..."

Page 5-5, line 12: Shouldn't occult deposition be included as well?

Page 5-5, line 26: should read "... into services being beneficial to ecosystems."

Page 5-5, line 30: should read "... results in specific benefit to ecosystems?"

Page 6-1, line 23: Abundance is a weak term. Would nitrogen availability or another
term be better?

Page 6-1, line 25: Can this be made more explicit.

Page 6-1, line 26: replace "depth of soils" with "soil characteristics"

Page 6-2, line 1: should read "... sulfate and other acidifying components..."

Page 6-2, line 2: should read "soil constituents including sulfate..."

Page B-2: How does CMAQ compare and/or differ from the model being used by
CASTNET for estimating deposition at individual sites? Shouldn't the document be
consistent with  respect to use of SI versus English units? Elsewhere in the document
"miles" are used.

Page B-9: paragraph B. 1.3: Shouldn't those ecosystem services that will be evaluated be
clearly identified early in the process of developing the new standards?
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Comments from Mr. Richard Poirot

Comments on Chapter 3.  (Key Policy-Relevant Issues)
1. Alternative Indicators. There is very encouraging discussion in Chapter 3 and
elsewhere advocating broadened definitions of SOx and NOx, and of possible new
(secondary NAAQS) indicators for these pollutants - separately or combined - to
specifically include not just gaseous NO2 and SO2, but also (some of) their various
transformation products. However, the discussion of alternative indicators seems
unnecessarily vague, and might benefit from more specific examples. It's not clear how
far the Agency might actually be able (or willing) to depart from the traditional practices
of considering only direct effects of and/or indicators based on gaseous NO2 and SO2.
Could, for example, a new indicator be:
   -   Total atmospheric oxidized sulfur (sum of S from airborne SO2 and SO4)?
       Total atmospheric oxidized nitrogen (sum of N from NOy & NH4NO3)?
       Total (wet, dry and occult) deposition of oxidized atmospheric sulfur?
   -   Total deposition of atmospheric nitrogen (or at least oxidized nitrogen)?
   -   Exceedance (by X %) of critical load for atmospheric sulfur deposition?
       Exceedance (by X %) of critical load for total sulfur + nitrogen deposition?

Has this current consideration of NAAQS indicators based on transformation products of
"criteria" pollutants has always been an option, or is it inspired by the clarifying
definition of welfare effects added to Section 302 (h) of the 1990 CAAAA (".. .whether
caused by transformation, conversion,  or combination with other air pollutants")?

The question of whether "total nitrogen deposition" - including both reduced and
oxidized forms - is on (or off) the table as a potential indicator is of particular interest.
Discussion under "Policy Assessment" in Chapter 6 (P. 6-lines 21-31) suggest that yes,
it's on the table (i.e. there's a potential to consider and possibly control ammonia
emissions here).  If so, this should be identified up front as a key science/policy issue in
the ISI and not withheld from public discussion until the (policy assessment) ANPR.

The possible use of critical loads (also explored in more detail in the Chapter 6 discussion
of the planned policy assessment) raises an important question of whether site-specific
conditions of receptor locations could be incorporated as a component of a secondary
NAAQS indicator. Expressing a secondary NAAQS as a limit (absolute or %) by which
a critical load for S (or N or S+N) should not be exceeded might allow for a "uniform"
number to be applied nationally which would have substantially different regional
implications.  Is this option on the table?

A related question is whether separate  standards might be applied to different areas (for
example Class 1 Wilderness areas as suggested on p. 5-3, line 32).  Conceivably, it might
be possible to specify, or propose a process for identifying, "sensitive areas" where more
stringent standards might apply. This reminds me to point to an informative new Forest
Service-supported  critical loads web resource at: http://nrs.fs.fed.us/tools/cl/home.htm
and to suggest that EPA might do well to seek collaborative assistance from the FS and
NFS in this secondary NAAQS review.
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2. Sulfate & Nitrate Aerosols. There's a clearly stated intention to avoid consideration
of public welfare (primarily visibility) effects of sulfate and nitrate aerosols in this review
- but rather to address these only in the upcoming PM review.  The details  of and reasons
for this separation aren't clear, and I don't see why a section focusing on "the visibility
effects of sulfate and nitrate aerosols" couldn't be developed and copy/pasted into both
the secondary  SOx/NOx and the PM ISIs (and environmental risk assessments).  Good
arguments could be made on both sides of the issue of whether visibility effects can best
be addressed through secondary PM2.5 or secondary SOx & NOx standards (or
especially the  combined sulfate+nitrate standards that seem to be on the table here for
deposition-related effects).  But this interesting and potentially illuminating
science/policy discussion (and resulting policy options) would be precluded by an
advance decision that only one approach will be considered.

The nature and logic of this division isn't stated very clearly. Page 3-1, lines 19-21,
indicate that "this review will focus on the ecosystem-related welfare effects that result
from the deposition of these pollutants and transformation products in the gas-phase...."
Does this mean that wet, occult and particle-phase deposition of these pollutants will not
be considered  here?  Do visibility effects from light absorption by gaseous NO2 belong
in the PM review?  The first paragraph on page 4-1 describes somewhat more clearly the
intended division of effects associated with pollutants suspended in the ambient air (only
considered under PM) vs. pollutants which have been deposited to the environment
(considered here).  However, no justification is provided for this division. Babs by NO2
still falls through the cracks, particulate-phase NH4NO3 is often partially lost by PM2.5
mass measurement methods and undergoes rapid and frequent transformations to and
from the gas phase. Sulfates + nitrates account for a majority  of visibility impairment
nationally,  are typically the most "anthropogenic" (and controllable) of major PM and
visibility-impairing species, are (nearly) unique as water-absorbing PM species, greatly
enhancing their scattering efficiencies compared to most other species (although water is
intentionally disregarded in PM measurements).  The aerosol information is also a critical
component of the S & N transformation, transport, air quality characterization and
deposition stories - all  of which need to be included here even if aerosol effects are
disregarded. Conceivably a gas+aerosol, S+N indicator might correlate well with but be
easier to implement than one based on deposition or critical loads.

At a minimum, there needs to be a more clearly-stated (and convincing) rationale for the
predetermined avoidance of secondary aerosol effects.  A section focused specifically on
sulfate+nitrate visibility effects (& pro & con vs. an unspeciated PM2.5 indicator) should
be included in the PM document (and given high time priority, since that review lags this
one).  This review should include a pointer to that section in the PM doc (or just include
it as an appendix here).  But most importantly, there needs  to be a way to include
consideration of aerosol effects in developing alternative environmental exposure
characterization and risk assessments, such that a policy decision can be based on
understanding aerosol and other benefits of alternative deposition-based standards (or
deposition benefits of speciated aerosol + gaseous standards, etc.)
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3. Title IV and CAIR. The CAA Title IV SO2 and NO2 emission cap and trade
program with its pending CAIR extension is the 800 Ib. gorilla lurking in the corner of
the room, while the plan avoids making eye contact. I think it would be important to
include a discussion of these programs in the Chapter 1 review of regulatory history, and
to then address some associated policy-relevant issues in Chapter 3. SO2 NAAQS were
last reviewed in 1988, following a decade of extensive, prioritized acid rain research and
just as the 1990 CAA details were being developed. A (much) tighter secondary (and/or
primary) NAAQS (for SO2 and/or its transformation products) would have been an
effective way to achieve the same emission reductions that have been achieved by Title
IV - perhaps in a shorter time frame or in a way where environmental benefits rather than
polluter's profit margins were maximized. We seem however to now be stuck indefinitely
with an allowance-based cap and trade program as the only way that SO2 and NOx
emissions will be controlled in the future (and EPA's  former "Acid Rain"  Division is
now the "Clean Air Markets" Division).

Air quality-based, deposition-based or effects-based standards are at odds with an
emissions-based trading program, since the latter approach assumes all  emissions are
equal in space and time, while the former approaches  assume some locations or times are
more important than others. How revised NAAQS for SOx/NOx and transformation
products might interact with, complement or modify existing and future emissions trading
programs could be an interesting  and informative area for future science/policy
discussions, and should be emphasized in this NAAQS review cycle rather than avoided.
Even if cap & trade remains our preferred or exclusive control approach in the future, the
timing and  magnitude of the cap(s) could and  should be guided  by health, welfare and
environmental protection needs.  Consideration should also be given to extension of or
alternatives to these programs for the Western half of the country, for which Title IV and
CAIR have not reduced emissions.

In considering current and projected future environmental and other welfare effects, and
associated alternative secondary NAAQS, the Agency will want to consider historical
deposition burdens (generally  declining since  the mid 1970s, well before Title IV) and
projected future reductions from CAIR (or other on-the-way programs). The
environmental responses - first in concentration and deposition and later in biological
indices - to recent (primarily) downward trends in emissions can provide compelling
evidence of causal relationships.  And evaluation of the rates and extent of biological
recovery will want to take  into account both current and projected future loading rates.

Specific Comments on Chapter 3
P. 3-1, lines 17-24: You could change "particulates" in line 18 to "transformation
products" for a more inclusive term.  Or if you intend "NOx and SOx" here to mean all
gaseous precursors and gaseous transformation products, then this is inconsistent with the
term "NOx and SOx particles" in line 22.  It's also unclear what "gas-phase" in line 20
applies to.  I assume you plan to consider effects contributed by deposition of gaseous,
particulate  and precipitation-bound pollutants.
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P. 3-1, lines 26&27:  The term "ambient" on line 26 isn't quite right unless you add "and
their transformation and deposition products" after "SOx" on line 27.  I think you want to
specifically include deposition effects but avoid considering effects from the pollutants in
the "ambient" air (or at least that's what you say on page 4-1).

P. 3-2, line 1: You could add "soil and bedrock geology," after "conditions,".

P. 3-2, line 6: You could add "or deposition" after "air quality".

P. 3-2, line 22: You could add "effects from" before "deposition" and change "sulfates"
to "sulfur compounds" (presumably you intend to include effects from SO2 deposition).

P. 32, lines 30-3 1 :  The parenthetical expression relating to long-term impacts from
current and cumulative loadings is clearly relevant to a NAAQS review, but isn't
necessarily a  subset of this bullet on effects of varying meteorological & climatic
conditions. I suggest breaking it out as a separate bullet and putting it before the one that
considers met & climate variability (or long-term change).

Comments on other sections

Chapter 1
P. 1-4, lines 25-27: This 'logic' - that there were insufficient data to establish a
quantitative relationship between SO2 and vegetation effects - seems to be necessarily
based on an assumption that it was necessary that gaseous SO2 be the indicator.  Has this
assumption changed and why?

P. 1-5, lines 25-26: 1  don't think "premature and unwise" are accurate descriptors
(unless modified by the term "politically") for EPA's reluctance to prescribe any
regulatory control program for sulfur oxides in 1988 - considering that the Agency has
estimated (midrange  estimate in 1999 report) economic benefits of the 1990 CAA
Amendments (which included the 10 million ton cap and trade SO2 reduction) of $110
Billion, and currently estimates that incremental benefits from additional future 862 and
NOX reductions in from the Clean Air Interstate Rule (CAIR)  "will result in $85 to $100
billion in health benefits and nearly $2 billion in visibility benefits per year by 2015 and
will substantially reduce premature mortality in the eastern United States."
I do think that at that point in time (1988), the Agency was (understandably) politically
reluctant to act because Congress was actively debating 'acid rain control legislation' (&
had been for the preceding decade), and the Agency was working on an internal plan that
became the basis for the Title IV cap & trade provisions of the 1990 CAA Amendments.
Twenty years later, it appears that the predetermined policy is that SO2 and NOx should
be controlled primarily through emissions-based cap & trade and not by effects-based
NAAQS.
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P. 1-9, line 18: Generally, the clarity of this "science primer" section would benefit from
some editing, for example:

P. 1-9, line 21: Change "generally accepted science" to something like "the more recent
peer-reviewed scientific literature"...

P. 1-9, line 25: You could delete "most", since air masses & met influences acting on the
formation of ozone are limited primarily to sunny summer days, while reactions of SOx
and especially NOx are also important in clouds, at night, during winter, etc.

P. 1-10, line 2:  You need something like "with" before "effects".

P. 1-11, line 11:  add","  after "sediments".

P. 1-12, line 3:  Add something like "Research on" before "Effects".

P. 1-12, line 7: Change "...  and in the case of calcium, magnesium and potassium, are
essential ..." to something like "... and because calcium, magnesium and potassium are
essential ..."

P. 1-12, line 9: "correlated" is pretty weak. Could maybe change it to "associated".

P.1-12, lines 22 & 23: No idea what the point is here, but I'm sure it's not the
"uncertainties" that cause greater relative contributions...

P. 1-12, line 24:1 would change "... may be higher" to "can be  substantially higher" (of
course episodic extremes are higher than averages. Ain't no "may" about it).

P. 1-12, line 25:  You could delete "over-"  (or else delete "often").

P. 1-13, lines 7-9: This observation that formation of ammoniated nitrate & sulfate
aerosols extends the atmospheric lifetime (& transport) of NH3/4 from a day to more than
a week (prior to  deposition), helps illustrate the problem of avoiding discussion of sulfate
& nitrate aerosols from this NAAQS Review process.

Chapter 4
P. 4-1, lines 3-4: As indicated elsewhere, avoiding any "duplicating" of topics intended to
be addressed in the PM review doesn't necessarily save any staff resources. A 'portable'
section on the visibility effects of sulfate and nitrate aerosols could be cheaply
"duplicated" and copy/pasted in both the SO2/NOx ISA and the PM ISA. It would make
for some interesting policy discussion (to include either here or  in PM ISA or both) to
consider whether future visibility might be most efficiently improved by secondary
PM2.5 standards or by alternative secondary indicators for sulfur & nitrogen oxides and
their transformation products.  For example, an indicator of total oxidized atmospheric
sulfur (S from SO2 + SO4) might be worth considering (and would likely correlate well
with total S deposition),  but may be precluded by this a priori decision to separate aerosol
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phase transformation products of S & N from their precursor gases and their deposition
products.

P. 4-1 lines 9-12: This sentence needs work. If the subject is "category", the (line 9)
verb (line 10) should be "is" not "are", but how does this category get to be "these
processes" (line 11), and what is it that "interacts" (line 12) with other PM components?

P. 4-3 line 8: Why not include "and Canadian", since their deposition is often
predominantly from US sources and we do have an AQ Agreement on acid deposition.
Generally, I think there will be a very useful body of historical and continuing recent
literature relating to critical loads and similar approaches from both Canadian and
European research groups - who are more generally more advanced in this area than we
are.  It could be an especially limiting approach to focus here primarily on US studies.

P. 4-5, line 15:  You could add ", transport" after "chemistry"

P. 4-5, line 48:  Might add a bullet or two relating to the (time lags and) physical,
chemical and ecological characteristics of "recovery" from acidification and how the end
points might differ from pre-acidification conditions.

Chapter 5
P. 5-2, line 7: Might also consider including Southern Canada in some of the US
"mapping" exercises (for example forest sensitivity and surface water mapping by NE
Governors & Eastern Canadian Premiers).

P. 5-3, lines 10-20:  In  developing and comparing these gridded layers of ambient
concentration and deposition, it would be useful to include grid layers aerosol SO4, NO3
& NH4 (regardless of whether visibility effects are considered here), and might also be
informative to include similar gridded emission data and analyses (i.e. plots of the ratios
of deposition to emissions).

P. 5-3, line 29:  Could add "current and historical" after "including".

P. 5-3, line 32:  Could add ", National Parks and Fish and Wildlife Refuges and National"
between "Class I" and "Wilderness".

Chapter 6
P. 6-1, line 6-1:  It's very encouraging to see the option of a "total nitrogen" indicator
(presumably to include deposition of all oxidized and reduced N). It's not clear in earlier
sections of the plan that this option is actually on the table, and that effects of NH3 &
NH4 deposition will be fully considered.  An interesting range of other optional
indicators (and receptor-specific modifiers) for biological sensitivity to fertilization or
acidification also seem to be presented here for the first time (as exclusively policy
considerations).  The technical foundations for use of these potential indicators should be
presented up front and  in public in the ISI and evaluated in the ecological risk assessment
- rather than considered only in the Agency's internal policy assessment discussions.
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P. 6-2, line 8: I'm not sure that determination of "adversity" is exclusively a policy
decision.  Many of the various tools and methods for assessing adversity are developed
and evaluated in the scientific realm and associated literature (albeit the dismal science).
Presentation of these techniques and their associated results should not be withheld until
the last-minute ANPR.

The concept of "sustainability" is a related topic which is a policy consideration that
would benefit from advance scientific illumination (in might conceptually add a time
dimension to the concept of "adversity"). Are there ecosystems where the present state
of acidification is not currently resulting in "adverse" ecological effects, but where the
net rate of base cation removal from acid deposition can't be sustained in the future?
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Comments from Mr. David Shaw

I believe EPA's Draft Plan fairly presents the key policy-relevant issues and the proposed
method to review issues related to science, risk-exposure and policy.  The Draft Plan also
recognizes the significant regional variability in effects associated with this issue.

The Draft Plan states that the role of ammonia will be considered as part of the analysis
but does not contain specifics on how the role of ammonia will be evaluated. The level
of ammonia emissions in the United States is substantial and in order to fully review the
secondary NAAQS for SO2 and NO2, its role in transport and subsequent deposition
formation needs to be fully understood and evaluated.

Substantial data from current studies of various ecosystems exists and should be used as
part of this review. Current data shows small, but improved trends in aquatic chemistry
and species. A thorough analysis of these trends should be included in this review and
factored into any modeling provided as part of EPA's analysis.
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Comments from Dr. Kathleen Weathers

This draft plan is in places specific and in others quite vague, necessarily; it is a draft plan.
Nonetheless, while some of the sections are rather straightforward and reasonably clear, the
Risk/Exposure section is significantly underdeveloped. It will be, ultimately, the synthesis of
research findings and understanding. Thus, among other things, the development of a conceptual
model as well as clearly defining specific response variables will be critical to developing a
credible analysis to support this area of inquiry.

Below I have listed general as well as many specific comments on this version of the draft.

First, I am encouraged that in 1995 the Acid Deposition Standard Feasibility Report to Congress
concluded that "establishing acid deposition standards for sulfur and nitrogen deposition may at
some point in the future be technically feasible..." The ability to relate emissions, deposition and
ecosystem effects seems to me still at the core of the secondary effects assessment (see below).

A primary science and policy-relevant "tool" that was not explicitly addressed is the importance
of the environmental monitoring data and programs that have been and will be necessary to
detect long-term and short-term secondary effects of NOx and  SOx. Ultimately, this  document
should identify what monitoring programs are necessary to determine the efficacy of air quality
related policy.

I applaud the efforts to combine the effects of pollutants. That said, I think it very important to
consider the emissions, deposition and ecosystem effects of ammonia and ammonium as well, as
was pointed to in section 1.4.3. This review should continue to underscore the importance of
linked biogeochemical processes in considering effects of NOx and  SOx on ecosystems.
Compartmentalizing analyses/assessment by chemical species or particle size makes little sense
from an ecosystem effects standpoint.

Throughout (page 3-2 and beyond) the document, the importance of receptor surfaces (i.e.,
landuse/landcover) in influencing atmospheric deposition is under realized. "Ecosystem
receptors" are considered important to identify for their susceptibility to SOx and NOx in this
report, however, it is also important to recognize the importance of receptor surfaces in affecting
the deposition of gases and particles (dry deposition), since dry deposition can contribute
significantly to total deposition (in many locations and for many chemical species ^50% of total
deposition).

Introduction:
The relative influence of ground-based vs tall stack-emitted SOx and NOx vis-a-vis deposition
should be noted.

The background (history) section is quite useful. Thank you for including it.

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Section 1:
1.4 Science Primer
line 21: what's the definition of "generally accepted science?" By whom? How is it determined?

line 31: ..."can initiate changes in..."

Figure 1.1 might be modified for clarity. For example, the use of the word "soil processes (e.g.,
nitrate, sulfate and NHx)" is confusing; processes within the soil influence the rate  of production
or movement of these ions.  The arrow showing dry deposition depositing vertically to land
surface could be modified to indicate more realistic transfers (horizontal deposition and/or
deposition to trees). It might also be worth modifying the size  of the arrows (for fluxes) to
indicate (broadly) proportional contribution.

1.4.1
The beginning of this section could be made clearer and more  linear.

1.4.3
I think it very important to include ammonia/ammonium as part of discussion on nitrogen
deposition, especially since it is becoming an increasing issue  in parts of the US (e.g.,
southeastern US). Salient points from the PM review should be cross referenced in  the NOx/SOx
report, at a minimum.

Section 3: It is important that dry deposition is considered part of this review (the deposition of
gases and particles).

Section 4: It would be helpful to include a list of the related topics that will be addressed by the
PM science assessment, just for references.

Page 4-1.1 assume that the  data from US  and Canadian federal monitoring networks will be used
as a basis to help..."provide a better understanding of the nature, sources, distribution..." of air
and precipitation chemistry and deposition. If so, they should be noted as a source of information
in addition to peer reviewed literature.

How will the vast literature be distilled and/or weighted?

Give dates  for the window in which published literature will be considered (page 4-1).

Page 4-2: Deposition (atmospheric and acid deposition) should be used as a search  term. Also, a
brief accounting of the relative numbers of papers in each of the search categories would be
instructive.

Page 4-3:1 think the focus should be  explicitly expanded to recent studies in the US and abroad,
especially like ecosystems in other countries (Canada and the UK, for example).
It seems to me that the assessment of the scientific quality of studies is redundant, at best, with
peer review and may lead to subjectivity and/or bias in deciding which studies are considered
high quality and which are not.
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Section 5: This section's title addresses exposure (often synonymous with deposition, it appears)
and risk. The title is inconsistent with the discussion below and should more accurately read:
Exposure and Risk.

Page 5-1: The introductory paragraphs to this section are quite unclear. Creating a conceptual
model (i.e., figure) depicting the proposed steps of the assessment would help. As I understand it,
the goals are to consider the effects of nitrogen and  sulfur deposition (aka inputs) to ecosystems.
The response variables for ecosystems are functions (such as productivity, rates of nutrient
cycling), and the more general ability of the ecosystem to produce clean water/air (i.e., goods
and services via the ecosystem functions noted above), and that these ecosystem functions and
services will be valued.

I could not tell what long-term trends would be assessed (line 14), nor how such things as
"biologically-relevant" indices or "sensitive" ecosystems will be defined.  Furthermore, in
developing indices for assessment, it would be useful to know what scientific criteria are likely
to be used by the Administrator  when s/he makes "the final decision as to whether an effect is
significantly adverse," so that this section can be made most useful and relevant to the process.

There is confusion throughout this section in regard to the use of the terms exposure  (does this
mean ambient air concentrations of SOx and NOx and their effects on ecosystems?) and
deposition, and the quantity of N and/or S delivered to ecosystems. Demonstrating the link
between air concentrations and deposition is of course critical to both exposure and risk
assessments and is a topic that it being actively researched.

Once again, the scope section might reiterate what the response variables  are. (Many of the
potential questions to be posed are also active areas of research.)

The topic of ecological recovery is a challenge. First, it must be defined—is it biological?
chemical? What are the measures? Recover to what? Next, in regard to assessing standards,
recovery may be especially relevant in regard to thresholds: are there demonstrated exposures
and levels of deposition beyond which ecological recovery can, or cannot, be achieved?
Examining the literature for this country and abroad on the determination  of environmental
thresholds for N and S deposition and exposure will be important.

5.1 Assessment Approach
The goals here, once again, are to examine the relationships between emission and deposition,
and deposition and ecosystem effects (this goal is stated in the Appendices, and see above).
Thus, it seems important to be clear, from the outset, about the suite of ecosystem effects
(response variables) to be considered (see comments above). Also, bringing to bear all of the
data and analyses available, from process models as well as from monitoring programs and
specific research projects will be important, as suggested. There are published studies for areas
of the country showing relationships between emissions and air/rain concentrations and, in some
cases, wet deposition. As noted in this document, deciding on the relevant time step for this
analysis will be important. For example, is  annual or seasonal deposition sufficient to determine
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welfare effects, or are hourly or daily data necessary? For evaluating many ecosystem responses,
the former might be the focus.

How does the CMAQ model compare to other estimates of total deposition based on monitoring
data? Does CMAQ take into account land use/land cover? Do regions of high and low deposition
line up, especially for sensitive ecosystems, using different approaches?

Page 5-3, lines 10-20: It is unclear to me what analyses are being proposed and how other data
might be used in these analyses  (e.g., precipitation, relative humidity, etc.).

There exist GIS-based maps of sensitive ecosystems as well  as of atmospheric deposition (e.g.,
www.ecosystems-research.com/fmi/reports). Although I think that the idea of "normalizing"
ecosystems is interesting, data for the types of characteristics identified are unlikely to be widely
available and/or published. It may be instructive to look at the BioScience articles on acid rain
(2001) and nitrogen (2003) that are a result of the ScienceLinks program as models for synthesis.

Although the cluster analysis can group ecosystems together based on certain characteristics, I
underscore that it  is critical that those characteristics are relevant to the questions being asked. (I
have seen the method used in ways that are completely irrelevant to the process being
addressed).

Models
I think it important to preface a model results or modeling section with a general discussion on
the purpose, utility,  strengths and limitations of the models used as part of this analysis. Rather
than being predictive, most models are best exercised as heuristic tools.

Also, there is no mention of the potential use of Day-Cent-Chem except as part of a list. Further
analysis of and emphasis  on GIS-based models should be considered
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