NATIONAL
 ESTUARY
 PROGRAM
BACTERIAL MONITORING  AND  WATER  QUALITY  STANDARDS    <>EPA

Tillamook Bay—Oregon's third largest estuary—supports a thriving commercial and recreational shellfishing industry.  Unfortunately, bacteria concen-
trations found in all five of the Bay's major tributaries routinely violate state and Federal water quality standards, threatening human health and causing
commercial harvest area closures.
As is often the case in estuaries across the country, Tillamook Estuaries Partnership (TEP) knew bacteria came from a combination of point and non-point sources including agri-
cultural runoff, failing septic systems, overloaded municipal treatment plants, and urban stormwater. The tricky part was identifying exactly where these sources were delivering
the largest loads and quantifying how much bacteria was threatening the Bay's health.

THE NATIONAL  ESTUARY PROGRAM  IN ACTION                                     Tillamook  Estuaries  Partnership
With its Comprehensive Conser-
vation  and Management Plan
(CCMP) serving as a guide, the
TEP launched an ambitious bac-
teria research  and  monitoring
effort in the basin.

Data produced from this effort
has allowed TEP to apply mitiga-
tion efforts exactly  where they
are needed in order to efficiently
and effectively achieve  water
quality goals. In addition, bacte-
ria data collected through TEP's
monitoring was also used by the
State of  Oregon to  create the
Tillamook Bay Bacteria  Total
Maximum Daily Load (TMDL).
          TEP began its monitoring pro-
          gram in 1996, launching an ex-
          tensive Storm-Based Monitoring
          Program to identify and evaluate
          bacterial concentrations attrib-
          utable to the watershed's differ-
          ent land uses.  The effort also
          identified   suitable  long-term
          sampling sites for tracking the
          status and trends of bacteria
          throughout specific river reach-
          es. A small team of dedicated
          volunteers joined the effort the
          following year, and 13,000 sam-
          ples later, the TEP reported sig-
          nificant progress in 2007. TEP's
          trend data has led to some im-
          portant  discoveries,  including
the determination that forested
areas of the watershed generally
meet water quality standards for
bacteria,  indicating that forest
wildlife is not a key contributor
of bacterial contamination  as
some thought.

Working with Oregon State Uni-
versity researchers in 2001, the
TEP began a three-year genetic
marker study  in the Tillamook
Bay Watershed.  The study en-
abled scientists to discriminate
among bacteria from human and
ruminant  sources.  Ruminant
sources include cows, elk, and
deer. Through the analysis, they
 EFFECTIVE
                    EFFICIENT
                  ADAPTIVE
COLLABORATIVE

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                                 found widespread contamination
                                 from farm animal waste in spe-
                                 cific  segments of the river and
                                 high  concentrations of human
                                 waste in  other parts. Using  the
                                 data, watershed managers can
                                 now build the best strategies for
                                 decreasing fecal  pollution indi-
                                 cators in specific areas.

                                 The TEP is working with agricul-
                                 tural  landowners,  including  the
                                 local dairy  cooperative,  which
                                 made some important improve-
                                 ments to its discharge system so
                                 that  its effluent no  longer dis-
                                 charges directly into the Wilson
                                 River. With a credible, scientific
                                 framework the TEP  has  devel-
                                 oped  partnerships  with  local
                                 municipalities on habitat resto-
                                 ration and stormwater manage-
                                 ment projects. Additionally, TEP
                                 provides  assistance  to   small
                                 landowners  by  helping to  re-
                                 vegetate riparian  areas on their
                                 property,  and offers workshops
and other educational opportuni-
ties about the  importance of ri-
parian  owners and, for agricul-
tural   purposes,   fencing   off
riparian areas to prevent live-
stock from entering streams and
rivers. While the lower sections
of four of the  key rivers  in the
Tillamook  Bay watershed  still
violate  Oregon's  water quality
standards for  recreational use,
the fifth tributary,  the Wilson
River, has been in  compliance
since 2005, and statistically sig-
nificant trends  indicate that bac-
teria concentrations remain on a
steady  decline.

More than a decade's worth of
status  and trend  information  is
paying  off for the TEP with tar-
geted approaches that support
successful, efficient  implemen-
tation  of  the  Comprehensive
Conservation and Management
Plan.  Investing in  efforts that
strategically  target  land  uses
that contribute to surface water
bacteria is bringing the Tillamook
Bay watershed closer to coming
into compliance  with state  and
Federal water quality standards.

Visit  www.tbnep.org  to learn
more about this and other TNEP
efforts.

EPA's National Estuary  Program
(NEP) is a unique and successful
coastal watershed-based program
established in 1987 under the
Clean  Water  Act Amendments.
The NEP involves the public and
collaborates with partners to pro-
tect, restore, and maintain the wa-
ter quality and ecological integrity
of 28 estuaries of national signifi-
cance located in 18 coastal states
and Puerto Rico.

For more information about the
NEP  go  to www.epa.gov/owow/
estuaries.
The NEP:  Implementing the Clean Water Act in ways that are  Effective, Efficient, Adaptive, and  Collaborative.
                                                                            EPA-842F09001

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