EPA/600/R-05/149
                                                     November 2005
TMDL Model Evaluation  and Research

                         Needs
                             By
              Leslie Shoemaker, Ting Dai, and Jessica Koenig
                         Tetra Tech, Inc.
                       Fairfax, Virginia 22030
                       Contract 68-C-04-007
                        Mohamed Hantush
              Land Remediation and Pollution Control Division
              National Risk Management Research Laboratory
                       Cincinnati, Ohio 45268
              National Risk Management Research Laboratory
                  Office Of Research And Development
                  U.S. Environmental Protection Agency
                       Cincinnati, Ohio 45268

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                                             Abstract

The report was submitted in fulfillment of contract number 68-C-04-007 by Tetra Tech, Inc., under the sponsorship
of the United States Environmental Protection Agency. This review examines the modeling research needs to
support environmental decision-making for the 303(d) requirements for development of total maximum daily loads
(TMDLs) and  related programs  such as  319 Nonpoint Source  Program  activities,  watershed management,
stormwater permits, and National Pollutant Discharge Elimination  System (NPDES) discharge evaluations.  By
examining the currently available models and considering the needs for TMDLs and related watershed programs, a
comprehensive list of modeling research needs can be developed.

More than 65  currently available  models were  evaluated  for  their capabilities and applicability to  TMDL
development  and related watershed  management  activities.   Evaluation tables  were  developed  to facilitate
comparison of models and inventory the potential gaps in model  capabilities, and fact sheets  were developed for
models to provide more detailed information on the capabilities of each model. Existing integrated models systems
were also evaluated and compared, based on data processing, modeling tools,  and model linkages supported.  The
review of available models  demonstrates that  many  of the dominant  pollutant types  and  waterbodies  can be
simulated using available technologies.   However, many specific technical gaps remain, especially in linkages
between air, surface water, groundwater and receiving water models.

The  model reviews and emerging trends in technology were considered  in developing a comprehensive  list of
research needs that encompass a variety  of sources, processes, waterbodies, data, systems, and integration needs.
This diversity of needs is consistent with the  current development of TMDLs across the country. Initially,  TMDL
development focused on dominant  source and pollutant types, but more recently, emphasis has shifted to completing
TMDLs under a variety of site-specific conditions and supporting more detailed implementation planning. Because
of the specialized and diverse characteristics of the needs, an equitable prioritization of specific needs cannot be
defined.  Key  recommended  research areas that  could  benefit multiple applications  include:  integrated  best
management practice (BMP) modeling  systems, more physically based representation of watersheds,  and support for
linkage of watershed and receiving water models.

The  review recommends that this diverse set of technical needs  should be supported by new and more flexible
modeling systems and tools.  Development of integrated modeling systems can provide the commonly needed tools
and  support adoption of new  solution techniques,  source representation,  and algorithms.  Providing integrated
system platforms, ideally Internet-based, can help minimize duplication of effort (shared on line data management,
data display, shared resources), while maximizing resources for more fundamental development and  research of key
components.  The use of Internet-based  technologies  has now emerged as a  viable  and practical  medium for
management  of data, analysis techniques and tools to support TMDL and more generalized watershed analyses.
Development of a standardized Internet-based framework could provide significant cost saving for the management
and  application of models.   In  addition, a standardized and open framework,  with clearly defined  linkage
capabilities, could encourage research and continuous testing and update of new components.

Future development  of  models and the  supporting infrastructure  of data and guidance can support informed
environmental decision-making, improve understanding of the physical systems in our world, and ultimately provide
information to support the effective restoration and protection of the nation's waters.

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                                          Foreword

The U.S. Environmental Protection Agency (EPA) is charged by Congress with protecting the Nation's land, air,
and water resources. Under a mandate of national environmental laws, the Agency strives to formulate and
implement actions leading to a compatible balance between human activities and the ability of natural systems to
support and nurture life. To meet this mandate, EPA's research program is providing data and technical support
for solving environmental problems today and building a science knowledge base necessary to manage our
ecological resources wisely, understand how pollutants affect our health, and prevent or reduce environmental
risks in the future.

The National Risk Management Research Laboratory (NRMRL) is the Agency's center for investigation of
technological and management approaches for preventing and reducing risks from pollution that threaten human
health and the environment. The focus  of the Laboratory's research program is on methods and their cost-
effectiveness for prevention and control of pollution to air, land, water, and subsurface resources; protection of
water quality in public water systems; remediation of contaminated sites, sediments and ground water; prevention
and control of indoor air pollution; and restoration of ecosystems. NRMRL collaborates with both public and
private sector partners  to foster technologies that reduce the cost of compliance and to anticipate emerging
problems. NRMRL's research provides  solutions to environmental problems by: developing and promoting
technologies that protect and improve the environment; advancing scientific and engineering information to
support regulatory and policy decisions;  and providing the technical support and information transfer to ensure
implementation of environmental regulations and strategies at the national, state, and community levels.

This publication has been produced as part of the Laboratory's strategic long-term research plan. It is published
and made available by  EPA's Office of  Research and Development to assist the user community and to link
researchers with their clients.
                                                    Sally Gutierrez, Director
                                                    National Risk Management Research Laboratory
                                               in

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IV

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                                            Contents


Abstract	ii

Foreword	iii

Contents	v

Figures	vii

Tables	viii

Acronyms and Abbreviations	ix

Acknowledgments	xiii

Chapter 1     Introduction	1

Chapter 2     Modeling Needs for TMDL Development	3
    TMDL Modeling Requirements	4
    Analysis Categories	6
    Model Selection Considerations	11

Chapters     What is a Model?	15
    Model Complexity	15
    Alternatives Analysis	16
    Model Development	16
    Integrated Modeling Systems and Linked Models	17
    Trends in Model Development	18

Chapter 4     Available Models	21

Chapters     Applicability of Models	35
    Application Criteria	35
    Capabilities and Limitations of Currently Available Models	52
    Integrated Modeling Systems	54

Chapter 6     Case Studies	59
    Development of Mercury TMDLs in Arivaca Lake and Pefia Blanca Lake, Arizona	59
       Background and Problem Identification	59
       Source Assessment	60
       Model Selection	62
       Model Setup	67
       Model Evaluation	69
       Model Application	72
    Development of a Nutrient TMDL in the Cahaba Paver, Alabama	74
       Background and Problem Identification	74
       Source Assessment	77
       Model Selection	79
       Model Setup	80
       Model Evaluation	84

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        Model Application	86

Chapter?     Research Needs	91
    Methodology for Identifying Research Needs	91
    Model Capabilities	92
        Sources	93
        Hydrology	94
        Sediment Loading	96
        Pathogens	97
        Nutrient Loading Simulation	98
        Mercury	99
        Other Pollutants and Toxics	99
        Chloride and Selenium	100
        Management Practice Simulation	100
        Hydrodynamics	101
        Sediment Transport	102
        Nutrients and Eutrophication	103
        Ecological/Habitat	104
    Data	104
    Model Defensibility	105
    Systems Development and Supporting Tools	107
    Integrated Modeling Systems	107
    Conclusions	108

References	Ill

Appendix: Model Fact Sheets	129
                                                 VI

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                                               Figures

Figure 2-1. Ten major analysis categories	6
Figure 3-1. Steps for performing allocation analysis	16
Figure 6-1. Location of Upper Cahaba River watershed, Alabama	75
Figure 6-2. Locations of sites utilized for ecoregion reference-stream analysis	76
Figure 6-3. Locations of major (>1.0 MOD) NPDES-permitted point source discharges in the
    Upper Cahaba River watershed	77
Figure 6-4. Water quality sampling sites used to assess nonpoint source concentrations of TP and other nutrients.. 78
Figure 6-5. Nonpoint source concentrations of TP as a function of percent urban area	79
Figure 6-6. MRLC land use aggregation calculated by LSPC subbasin delineation	81
Figure 6-7. Precipitation sites with 3 years of hourly or daily data used in the LSPC watershed model	81
Figure 6-8. Example of LSPC GIS interface for selecting headwater subbasins	82
Figure 6-9. Examples of EPDRIV1 cross-sections derived from FEMA survey data	83
Figure 6-10.  Schematic of the functional relationship of data inputs in the Cahaba Spreadsheet Model	84
Figure 6-11.  Example of hydrologic model calibration: model and observed streamflow	85
Figure 6-12.  Example of monthly streamflow predictions compared to USGS data at seven sites	85
Figure 6-13.  Estimated monthly median TP concentrations in the Cahaba River in September 1999, from
    Trussville (upstream at left) to Centreville (downstream at right). Gray lines indicate maximum and
    minimum monthly predicted TP concentrations based on streamflow variation	86
Figure 6-14.  Cahaba River nutrient TMDL evaluation points upstream of critical reaches	87
Figure 6-15.  TMDL scenario, growing-season median TP for 1999-2001 and three=year average	88
                                                  VII

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                                               Tables

Table 2-1. Top 10 303(d) List Impairments in the United States	4
Table 2-2. Summary of Analysis Sequences for Analysis Categories	8
Table 4-1. Summary of Available Models	22
Table 4-2. Summary of Receiving Water Simulation Capabilities	27
Table 4-3. Summary of Watershed Simulation Capabilities	29
Table 4-4. Summary of Management Practice Simulation Capabilities	31
Table 4-5. Overview of Models-Review Categories	33
Table 5-1. TMDL Endpoints Supported	37
Table 5-2. General Land and Water Features Supported	40
Table 5-3. Special Land Features Supported	43
Table 5-4. Special Water Features Supported	47
Table 5-5. Application Considerations	50
Table 5-6. Capabilities of Integrated Modeling Systems	56
Table 6-1. Cross-Sectional Comparison of Studied Lakes	65
Table 6-2. Comparison of Summer Hypolimnetic Water Chemistry between Studied Lakes	66
Table 6-3. Sensitivity Analysis on the Ruby Dump Sediment Load Multiplier	70
Table 6-4. Sensitivity Analysis on the Ball Mill Site Sediment Load Multiplier	70
Table 6-5. D-MCM Calibration for Pena Blanca, Arivaca, and Patagonia Lakes	72
Table 6-6. TMDL Allocations for Pena Blanca and Arivaca Lakes	73
Table 6-7. Summary of Median Nutrient Concentrations for April-October at the ADEM Reference Stations in
    Ecoregion67	76
Table 6-8. Sites Within the Cahaba River Watershed Not Impacted by Point Sources	78
Table 6-9. TMDL Summary for Cahaba River Phased TP Reductions	88
Table 6-10. Existing and Predicted Instream Growing Season Median TP in the Cahaba River	89
                                                 Vlll

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                              Acronyms and Abbreviations
ADEM
AGNPS
AGWA
AnnAGNPS
ARS
BASINS
BMP
BOD
CAEDYM
CFR
CH3D-IMS
CH3D-SED
CONCEPTS
CREM
CWA
DCIA
DDT
DEM
DIAS/IDLMAS

DMR
DOC
DWSM
ECOMSED
ED AS
EFDC
ELM
EMC
EPA
EPIC
FEMA
FMS
CIS
GISPLM
GLEAMS
GLLVHT
Alabama Department of Environmental Management
Agricultural Nonpoint Source Pollution Model
Automated Geospatial Watershed Assessment
Annualized Agricultural Nonpoint Source Pollution Model
Agricultural Research Service (USDA)
Better Assessment Science Integrating Point and Nonpoint Sources
Best management practice
Biochemical oxygen demand
Computational Aquatic Ecosystem Dynamics Model
Code of Federal Regulations
Curvilinear-grid Hydrodynamics SD-Integrated Modeling System
Curvilinear Hydrodynamics 3D-Sediment Transport
Conservational Channel Evolution and Pollutant Transport System
Council on Regulatory Environmental Modeling
Clean Water Act
Directly connected impervious areas
Dichloro-Diphenyl-Trichloroethane
Digital elevation model
Dynamic  Information Architecture  System/Integrated Dynamic Landscape Analysis
  and Modeling System
Discharge monitoring report
Dissolved organic carbon
Dynamic Watershed Simulation Model
Estuary and Coastal Ocean Model with Sediment Transport
Ecological Data Application System
Environmental Fluid Dynamics Code
Everglades Landscape Model
Event mean concentration
U.S. Environmental Protection Agency
Erosion Productivity Impact Calculator
Federal Emergency Management Agency
Flexible Modeling System
Geographic information system
GIS-Based Phosphorus Loading Model
Groundwater Loading Effects of Agricultural Management Systems
Generalized, Longitudinal-Lateral-Vertical Hydrodynamic and Transport
                                                IX

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CMS
GSSHA
GWLF
HEC-6
HEC-6T
HEC-HMS
HEC-RAS
HSCTM-2D
HSPF
HUC
KINEROS2
LA
LEAM
LSPC
MCM
Mercury Loading Model
MOD
MINTEQA2
MMS
MODIS
MOS
MRLC
MS4
MUSLE
NEXRAD
NHD
NPDES
P8-UCM

PCB
PCSWMM
PGC-BMP
ppb
PRMS
QUAL2E
REMM
RF3
scs
SED3D

SLAMM
SME
SNTEMP
Groundwater Modeling System
Gridded Surface Subsurface Hydrologic Analysis
Generalized Watershed Loading Functions
Scour and Deposition in Rivers and Reservoirs
Sedimentation in Stream Networks
Hydraulic Engineering Center-Hydrologic Modeling System
Hydrologic Engineering Center-River Analysis System
Hydrodynamic, Sediment, and Contaminant Transport Model
Hydrologic Simulation Program—FORTRAN
Hydrologic Unit Code
Kinematic Runoff and Erosion Model, v2
Load allocation
Land-Use Evolution and Impact Assessment Model
Loading Simulation Program in C++
Mercury Cycling Model
Watershed Characterization System—Mercury Loading Model
Million gallons per day
Metal Speciation Equilibrium Model for  Surface and Ground Water
Modular Modeling  System
Moderate Resolution Imaging Spectroradiometer
Margin of safety
Multi-Resolution Land Characteristics
Municipal separate  storm sewer system
Modified Universal Soil Loss Equation
Next Generation Weather Radar
National Hydrography Dataset
National Pollutant Discharge Elimination System
Program for Predicting Polluting Particle Passage through Pits, Puddles, and Ponds—
  Urban Catchment Model
Polychlorinated biphenyl
Stormwater Management Model
Prince George's County Best Management Practice Module
Parts per billion
Precipitation-Runoff Modeling System
Enhanced Stream Water Quality Model
Riparian Ecosystem Management Model
Reach File, version 3
Soil Conservation Service
Three-Dimensional Numerical  Model of Hydrodynamics and Sediment Transport in
  Lakes and Estuaries
Source Loading and Management Model
Spatial Modeling Environment
Stream Network Temperature Model

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SPARROW
SSTEMP
STORM
SWAT
SWMM
TMDL
TN
TP
TSS
USAGE
USDA
USFWS
USGS
USLE
WAMView
WARMF
WASP
WEPP
WinHSPF
WLA
WMS
WQBEL
WRDB
WWTP
XP-SWMM
SPAtially Referenced Regression On Watershed Attributes
Stream Segment Temperature Model
Storage, Treatment, Overflow, Runoff Model
Soil and Water Assessment Tool
Storm Water Management Model
Total maximum daily load
Total nitrogen
Total phosphorus
Total suspended solids
U.S. Army Corps of Engineers
U.S. Department of Agriculture
U.S. Fish and Wildlife Service
U.S. Geological Survey
Universal Soil Loss Equation
Watershed Assessment Model with an Arc View Interface
Watershed Analysis Risk Management Framework
Water Quality Analysis Simulation Program
Water Erosion Prediction Project
Interactive Windows Interface to HSPF
Wasteload allocation
Watershed Modeling System
Water quality-based effluent limits
Water Resources Database
Wastewater treatment plant
Stormwater and Wastewater Management Model
                                                XI

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Xll

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                                   Acknowledgments

The authors would like to thank Mohamed Hantush, Project Officer, and technical reviewers, Dr. Zhonglong
Zhang, U.S. Army Corps of Engineers, Environmental Laboratory, and Dr. Deva Borah, Illinois State Water
Survey, for their insightful and thorough comments.  The authors would also like to thank Dr. John Hamrick
and Dr. Jenny X. Zhen of Tetra Tech, Inc., who provided significant contributions to this document, including
conducting multiple model reviews to develop model evaluation tables and fact sheets and identify research
needs.  In addition, the authors would like to acknowledge their fellow members of the Tetra Tech TMDL and
Modeling Center whose experience in developing thousands of TMDLs was integral to the development of this
review and who supported this project with model reviews, examples,  and excellent suggestions for future
needs.  Specifically, the following  people developed  model  fact sheets  and case  studies to  support this
document:

    William Anderson
    Khalid AM
    Clint Boschen
    SenBai
    Jon Butcher
    Steve Carter
    Mustafa Faizullabhoy
    Yoichi Matsuzuru
    Sabu Paul
    John Riverson
    Eric Thirolle
    Brian Watson

The authors would also like to acknowledge the editorial review staff for their excellent review capabilities.
                                              Xlll

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XIV

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                                  Chapter 1       Introduction

Models are used to answer questions, support decision-making, and assess alternatives.  Models are used as a tool to
describe and understand the dynamics of physical systems including watersheds and receiving waters such as lakes,
rivers, estuaries, and coastal areas. Analysts use models to answer questions such as:

        How do inputs from human sources and land management activities affect the conditions of our receiving
        waters?

        How should these inputs be changed to benefit the condition of our receiving waters?

Exploration of these cause and effect relationships drives the need to develop  and apply models.  However, the
development of models that can reliably represent watersheds and receiving waters is also a tremendous challenge.
The analyst must consider how to  represent the system with sufficient accuracy to  have confidence in the result.
Practical and technical constraints require  that the representation  of the system is  consistent  with available
information, time, resources  and  scientific understanding.   Each modeling application needs to  address  this
challenge.  Each modeling application must address the challenge of balancing the needs of the particular study at an
appropriate level of accuracy and reliability.

Current environmental protection programs rely on  modeling to evaluate and  select various  control  strategies.
Historically, models have been  used  to derive water quality-based effluent limits  (WQBELs) for point source
discharges. Large-scale national estuary program activities (e.g., Chesapeake Bay,  Tampa Bay), which represent
some  of our most significant resources, have used models to  determine allowable loading of nutrients and restoration
needs. More recently, the Total Maximum Daily Load (TMDL) program has required the determination of loading
allocations that  will result in restoring waters designated as impaired on state 303 (d) lists.  In many cases, models
are used during  TMDL development to evaluate the  relationship between load reduction and compliance with water
quality standards.  Models provide a "linkage" between loads and receiving water conditions. To address the TMDL
development needs for a highly diverse group of impaired waters and  pollutant sources,  a wide range of model
techniques is required.  Although models are available and have been used successfully in environmental and water
quality management since the 1970s, the diversity of the pollutants, sources, and receiving water conditions to be
evaluated  under the TMDL program have placed new challenges on the use of modeling to support environmental
decision-making.

Watershed management planning also increasingly relies on modeling to  develop restoration goals and identify load
reduction  needs.  U.S. Environmental Protection Agency (EPA) released Nonpoint Source Program and Grants
Guidelines for States and Territories (October 23, 2003) for grants appropriated by  Congress in Fiscal Year 2004
and   in   subsequent  years.      The   guidelines,   available   online   at   http://www.epa.gov/fedrgstr/EPA-
WATER/2003/October/Day-23/w26755.htm, identify  the following nine minimum elements that must be included
in watershed plans funded by Section 319:


    1.  Causes and sources

    2.  Pollutant load reduction estimates

    3.  Management measures needed

    4.  Technical and financial assistance required to implement

    5.  Information and education activities

    6.  Implementation schedule

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    7.  Interim measurable milestones

    8.  Indicators to evaluate progress toward load reductions and water quality standards

    9.  Monitoring program


Addressing these guidelines, especially elements 2 and 3, places increased emphasis on developing watershed plans
that result in meeting water quality standards and demonstrate a linkage between pollutant sources and water quality.

The specific limitations of models for TMDL support and watershed management are not well documented.  States
and EPA continue to face new challenges as they address more complex waterbodies, impairments, and sources, for
which there is limited experience. As models and supporting systems evolve, research should be targeted to those
areas  where our analysis capabilities need to be improved.   As technology and various Internet-based applications
and mapping systems continue to improve, new modeling systems (e.g., one or more linked models)  and supporting
analysis tools (e.g., data preparation, output display, optimization, uncertainty analysis) will clearly be needed.

This review will examine the modeling research  needs to support environmental  decision-making and  programs
such  as 303 (d)-related development  of  TMDLs,  implementation  of 319 Nonpoint Source Programs,  watershed
management, stormwater  permits, and  National Pollutant Discharge  Elimination  System  (NPDES)   discharge
evaluations.  By examining the currently available  models and considering  the  needs for TMDLs and related
watershed programs, a comprehensive list of modeling needs can be developed.

The first task of the review process was to identify and evaluate currently available  model capabilities. The second
task  evaluates the ability of models to simulate the TMDL- and watershed-related  load reduction needs  and
management related alternatives. The evaluation also considers model performance, simulation capabilities, level of
effort, training, and user interfaces. Supporting this evaluation are case studies of two successful TMDL modeling
applications for nutrients and mercury.  Finally, the review provides recommendations for key areas of research to
address the modeling  needs and fill the gaps identified  in  the review of available models.  The evaluation  also
considers  the need for various  software and supporting tools, including linkages between existing models,  and
further integration  of new and emerging modeling resources to  address multiple media (e.g., air, surface waters,
groundwater).

This report is organized as follows:


    •   Chapter 2  discusses modeling needs for TMDL development, including programmatic and technical issues
        that affect model selection and application for TMDL development.

    •   Chapter 3 provides background  on models, including what a model is, processes and levels of complexity
        represented in available models, and recent trends in model development.

    •   Chapter 4  discusses the types of models available and identifies the models included in this review.

    •   Chapter 5 evaluates the applicability of the reviewed models and integrated modeling systems to TMDL
        development and watershed management applications and provides an evaluation of their capabilities.

    •   Chapter 6 includes two case study  applications: Case Study #1  - Development  of Mercury TMDLs in
        Arivaca Lake and Pena Blanca Lake, Arizona; Case Study #2 - Linked Model  Development for Nutrient
        TMDL in  Cahaba River, Alabama

    •   Chapter 7  discusses modeling needs and recommendations for future research.

    •   Appendix  includes detailed fact sheets on each of the models included in the review.

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               Chapter 2        Modeling Needs for TMDL Development
Section 303(d) of the Clean Water Act (CWA) and the EPA's Water Quality Planning and Management Regulations
(40 Code of  Federal Regulations  [CFR]  Part  130)  require states to  identify and list those waters  within  their
boundaries that are water quality-limited, to prioritize them, and to develop TMDLs for the pollutants of concern.
States develop and submit the 303 (d) list that defines water quality-limited waters to EPA for review and approval.
Water quality-limited waters are waterbodies that do not meet applicable water quality standards or are not expected
to meet applicable standards after application of technology-based effluent limitations for point sources.
A TMDL is the allowable load of a specific pollutant that
can  be discharged  into  a waterbody and meet  water
quality  standards.   TMDLs  consist   of   wasteload
allocations  (WLAs) for point sources,  load allocations
(LAs)  for nonpoint sources,  and  a margin of  safety
(MOS).  A TMDL is based on the  relationship between
pollutant  sources  and  water  quality and  provides the
scientific basis for a state to establish water quality-based
controls to  reduce  pollutant loads from both point and
nonpoint sources to restore  and maintain the quality of
the state's water resources.   The load expressed  is not
necessarily  a  daily  load  but  is  expressed  in  the
appropriate averaging period that protects  water quality
standards.   TMDLs, once implemented should result in
meeting the states' water quality standards.

Across the  country, thousands of  waters  are listed as
impaired by a wide variety of pollutants.  Based on most
recent  state 303(d)  lists, there are approximately 34,000
impaired  waters  in the  United States and  more than
59,000 associated impairments (National Section 303(d)
List    Fact   Sheet,   http ://www. epa. gov/o wo w/tmdl/.
accessed August  1,  2005).  Metals, pathogens, nutrients
and  sediment are the most common pollutants included
on state lists,  and the top  10 listed  impairments account
for over 75 percent of the total listings in the nation (Table 2-1). Since January 1, 1996, EPA has approved almost
15,000 TMDLs, accounting for approximately 25 percent of the nationwide listings.
Loading capacity. The greatest amount of loading that a
water can receive without violating water quality standards. (40
CFR130.2(f))

Load allocation (LA). The portion of a receiving water's
loading capacity that is attributed either to one of its existing or
future nonpoint sources of pollution or to natural background
sources. (40 CFR 130.2(g))

Wasteload allocation (WLA). The portion of a receiving
water's loading capacity that is allocated to one of its existing
or future point sources of pollution. (40 CFR 130.2(h))

Total maximum daily load (TMDL). The sum of the individual
WLAs for point sources and LAs for nonpoint sources and
natural  background. TMDLs can be expressed in terms of
either mass per time, toxicity, or other appropriate  measure.
(40 CFR 130.2(i))  TMDLs must be calculated with seasonal
variations and a margin of safety and must take into account
critical conditions for stream flow, loading, and water quality
parameters. (40 CRF 130(c)(1))

Margin of safety (MOS). TMDLs must be established with a
margin  of safety that takes into account any lack of knowledge
concerning the relationship between effluent limitations and
water quality. (40 CFR 130.7(c)) EPA guidance explains that
the MOS may be implicit (i.e., incorporated into the TMDL
through conservative assumptions in the analysis) or explicit
(i.e., expressed in the TMDL as a portion of the loading
capacity).

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Table 2-1.  Top 10 303(d) List Impairments in the United States
 General Impairment Name1        Number Reported            Percent Reported           Cumulative Percent

Metals                                11,526                       19.2                        19.2

Pathogens                             7,896                       13.2                        32.4

Nutrients                               5,585                        9.3                        41.7

Sediment/siltation                        5,045                        8.4                        50.1

Organic enrichment/low                   4,406                        7.3                        57.4
dissolved oxygen

Fish consumption advisories               3,178                        5.3                        62.7

pH                                    2,904                        4.8                        67.5

Other habitat alterations                   2,389                        4.0                        71.5

Thermal modifications                    2,200                        3.7                        75.2

Biological criteria                        2,116                        3.5                        78.7

1 "General impairment" categories may represent several associated pollutants or impairment listings. For example, the "metals"
category includes 30 specific pollutants or related listings (e.g., iron, lead, contaminated sediments).
TMDL Modeling Requirements

Models are often used to support development of TMDLs—typically to  estimate source  loading  and evaluate
loading capacities that will meet  water  quality standards. The  technical requirements of a TMDL  stipulate that
analysis should demonstrate that the allocation of point and nonpoint source loads would result in meeting water
quality standards.  The wording of the TMDL requirements also stipulates  that WLA and LA must  be separately
defined.  For modeling purposes,  this requirements means  that point and nonpoint sources  must be evaluated as
separate  sources  so that  they can be simulated  under various loading scenarios.   Point  sources  are  typically
represented individually to accommodate TMDL regulations, which require  "individual waste load allocations" for
point sources.  For wet weather or  diffuse point sources (e.g., stormwater), the municipal boundaries may need to be
addressed in the modeling analysis as well (USEPA 2002).  For nonpoint sources, TMDL guidance identifies that
allocation can be  made to individual sources, categories or subcategories of sources. In cases of limited data, LAs
can also be expressed as "gross allotments," allowing for larger scale grouping of nonpoint source.

In the development of a  TMDL, load allocations might also be identified that affect sources upstream of a listed
water depending  on the transport  properties of the pollutant.  The need to  look at sources upstream of the listed
water necessitates a "watershed-based" approach to TMDLs. The contributions upstream of the listed water are all
potentially part of the solution to  the impairment.  Although TMDLs are developed for specific listed waters and
their associated watersheds, the TMDL analyses are sometimes developed in "bundles" to address groups of listed
waters that are located within a larger collective watershed.  This grouping of TMDL analyses can result in more
efficient TMDL development and review.

EPA's 1991 guidance discusses the option of developing TMDLs using the "phased approach," often  referred to as
"adaptive management."  Under the phased approach, TMDL  development  should be  based on estimates that use
available data and information, but monitoring for collection of new data would be required (USEPA 199la). The
phased approach provides for further pollution reduction without waiting for new data collection and analysis.  The

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margin of safety developed for the TMDL under the phased approach should reflect the adequacy of data and the
degree of uncertainty about the relationship between load allocations and receiving water quality (USEPA 1991a).
The TMDL program does not dictate or require the use of any particular model  or modeling procedures.  NRC
(2001) discusses the use of modeling in TMDL development, supporting the assertion that there is no recommended
model for TMDLs but that any model chosen for TMDL development should meet a set of criteria related to the
specific TMDL issues  (e.g., water quality standards, data availability, cost).
                                        TMDL Regulations and Guidance

Water Quality Planning And Management Regulations. Code of Federal Regulations, Title 40, Part 130. Regulations are available
online at http://www.apoaccess.gov/cfr/index.html.

USEPA. 2002. The Twenty Needs Report: How Research Can Improve the TMDL Program.  EPA841-B-02-002. U.S.
Environmental Protection Agency, Office of Water, Office of Wetlands, Oceans and Watersheds, Washington, DC.
http://www.epa.gov/owow/tmdl/20needsreport 8-02.pdf
USEPA. 2002. Establishing Total Maximum Daily Load (TMDL) Wasteload Allocations (WLAs) for Storm Water Sources and
NPDES Permit Requirements Based on Those WLAs. Memorandum from Robert H. Wayland, III, Director, Office of Wetlands,
Oceans and Watersheds, and James A. Hanlon, Director, Office of Wastewater Management, U.S. Environmental Protection
Agency, Washington, DC.  November 22, 2002. http://www.epa.gov/npdes/pubs/final-wwtmdl.pdf

USEPA. 2001. Protocol for Developing Pathogen TMDLs. EPA 841-R-00-002. U.S. Environmental Protection Agency, Office of
Water, Washington, DC. 132 pp. http://www.epa.gov/owow/tmdl/pathogen all.pdf

USEPA. 1999. Protocol for Developing Nutrient TMDLs. EPA 841-B-99-007. U.S. Environmental Protection Agency, Office of
Water, Washington, DC. 135 pp. http://www.epa.gov/owow/tmdl/nutrient/pdf/nutrient.pdf

USEPA. 1999. Protocol for Developing Sediment TMDLs. EPA 841-B-99-004. U.S. Environmental Protection Agency, Office of
Water, Washington, DC. 132 pp. http://www.epa.gov/owow/tmdl/sediment/pdf/sediment.pdf

USEPA. 1997. New Policies for Establishing and Implementing Total Maximum Daily Loads (TMDLs). Memorandum from Robert
Perciasepe, Assistant Administrator, Office of Water, U.S. Environmental Protection Agency, Washington, DC.  Augusts, 1997.
http://www.epa.gov/OWOW/tmdl/ratepace.html
USEPA. 1997. Compendium of Tools for Watershed Assessment and TMDL Development.  EPA841-B-97-006.  U.S. Environmental
Protection Agency, Office of Water, Washington, DC.

USEPA. 1991. Guidance for Water Quality-Based Decisions: The TMDL Process. EPA 440/4-91 -001.  U.S. Environmental
Protection Agency, Office of Water, Washington, DC. http://www.epa.gov/OWOW/tmdl/decisions/
EPA has provided guidance for major pollutant types
that  identify  modeling  and   analysis  needs   and
generalized  approaches   (USEPA  1999a;   USEPA
1999b,  USEPA  2001).     Other  modeling  related
guidance   from   USEPA   mostly  relates   to   the
requirements for record keeping and  documentation.
All TMDL reports,  models, and documentation are
subject  to  public review  and  comment.     Record
keeping and documentation of  all modeling  code and
software   are    recommended   as   part    of   the
administrative  records.    The  need  for review  by
USEPA and open comment periods for stakeholders
has resulted in a strong preference for public domain or
open code  modeling systems for application in TMDL
development.
                Administrative Records

While not a necessary part of the TMDL submittal, USEPA
recommends preparation of an administrative record containing
documents that support the establishment of and
calculations/allocations in the TMDL. Components of the record
should include all materials relied upon to develop and support
the calculations/allocations in the TMDL, including any data,
analyses, or references that were used, records of
correspondence with stakeholders and USEPA, responses to
public comments, and other supporting materials. This record
is needed to facilitate public and/or USEPA review of the
TMDL.

From: Guidelines for Reviewing TMDLs Under Existing
Regulations Issued in 1992
http://www.epa.gov/owow/tmdl/guidance/final52002.html

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                                                            Freshwater

Lakes - Metals
Lakes - Nutrients

Rivers - Metals/Pesticides
      (active & legacy)
Rivers - Pathogens
Rivers - Nutrients
Rivers - Sediment
Rivers - Temperature


         -


Analysis Categories

Understanding the types of impairments that  occur throughout
the country can assist in identifying the types of models that are
needed   to  investigate   impairments,   diagnose   causes   of
impairment, and identify management solutions.  The waterbody
and general impairment types can be grouped into 10 dominant
analysis  categories  (Figure  2-1).   The grouping  of analysis
categories is based on defining the physical processes associated
with  the  major  waterbody  types  and  the characteristics  of
impairments and associated pollutants.  The physical processes
of water  movement  characterize the major  waterbody  types
including lakes,  rivers, and tidal estuaries and  coastal areas.
Lakes and  reservoirs  are impounded waters, and the major
processes are associated  with relatively static water  systems.
Rivers are typically flowing systems characterized by velocity
and  volume of  flow.   Riverine studies   normally focus  on
concentration of pollutants  in flowing water.  In tidal waters,
analyses  focus on the  dominant processes  related to tidal flux,
salinity,  and  mixing.    Similar  to the  physical  conditions
associated  with   waterbodies, pollutants can  also  be  broadly
grouped  into nutrients, metals,  pathogens,  sediment and temperature.  Nutrients are  typically associated with
eutrophication-related effects; metals and toxics are  associated with sediment and water column criteria violations;
elevated  concentrations of  sediment and deposition of fine-grained  sediment are associated with  fish habitat
impairment; and in-stream temperature is a stressor associated with fish habitat.

These analysis categories illustrate the diversity of conditions that result in the selection of an appropriate analytical
approach.  Recent and current TMDL development efforts  have  resulted in  the  development of many TMDLs
representative of the 10 major categories of frequently observed waterbody-impairment combinations.  Examination
of recent TMDLs and  experience in the development of TMDLs were used to develop a general summary of the
typical sequence  of models  or analysis techniques that have been used (Table 2-2; 10 major combinations, and 1
combination having two types of pesticides—active and legacy).  This  table  is not intended to  provide specific
guidance on the  selection of modeling approaches for TMDLs but to  illustrate  the typical sequences of approaches
and the diversity of techniques employed. In addition, the table demonstrates how the selection of the appropriate
modeling techniques is tightly linked to waterbody type and impairment.  The table is organized  according to the
defining features of the analyses used in developing a TMDL.
                                                         Figure 2-1. Ten major analysis categories.
•   Impairment Conditions - TMDLs are a plan to meet water quality standards.  An understanding of when
    and under what conditions impairment occurs is needed to determine the type of analysis needed.

•   Delivery of Pollutants - Source loading can be delivered directly from discharges and from precipitation-
    driven processes.  The type of impairment is often related to timing of pollutant delivery.

•   Modeling Approach  -  The  selected approach will  include  a  combination  of watershed  loading and
    receiving water response models or other estimation techniques.

•   Model Output Used to Calculate Loading Capacity - Output from the model(s) is processed to provide a
    representation of the loading capacity that meets the water quality standards.

•   Typical Implementation - This feature qualitatively or quantitatively discusses the types of practices that
    could be used to achieve the loading target.

•   Sample Case Studies - Case studies illustrate the types of approaches described in each column of the
    table.

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Several observations relevant to modeling for TMDL development can be made from Table 2-2:


    •   TMDLs often require multiple models to address the watershed and receiving  water components  (see
        Category II, which includes Generalized Watershed Loading Functions [GWLF] and BATHTUB).

    •   Some pollutants are addressed through the  use  of  statistical/analytical techniques that are not formal
        "models" or "modeling systems" (see Category VII).

    •   Although many models are available, the 11  categories presented can be addressed by using a relatively
        small set of models.

    •   Processing of model output is needed  to specifically evaluate the TMDL's compliance with  the water
        quality standard.

    •   The example models shown are typically public domain and/or EPA-supported models.

    •   Explicit modeling of best management practices (BMPs) is not typically  included or required in a TMDL
        analysis.


However, examining the historical use of models for TMDL development is only  a reflection of how the currently
available models have been applied and does not explain the limitations in current models to address specific needs
or local considerations. Many additional waterbodies will require TMDL development, and, in some areas, TMDLs
will be revised to improve on previous analysis or reallocate source loading. If more efficient modeling systems or
more robust, process-based models are developed, users are likely to adopt the new technology.

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    Table 2-2. Summary of Analysis Sequences for Analysis Categories
     Category
                 I

Impairment
Conditions
River - Pathogens
Storm events or warm weather, dry
season periods
Lake - Nutrients
Summer/dry season
River- Nutrients
Summer/dry season/year-round
Delivery of Pollutants  Storm event runoff or dry weather
                    discharge, direct deposition
                                   Stormwater runoff, dry weather
                                   inflows, point sources
                                   Dry weather inflows (point source
                                   discharges, nonpoint sources,
                                   groundwater)
Modeling Approach
General
Approach
Watershed
Loading
Receiving
Water
Response
Wet weather and dry weather
pathogen analysis
Flow, concentration, and load
estimation using HSPF
In-stream response using HSPF (data
collection consideration)
Eutrophication analysis to identify
nutrient loading thresholds to meet in-
lake targets
Load estimation using GWLF,
AGNPS, AnnAGNPS, SWAT,
SWMM, or HSPF
Lake response using BATHTUB.
More detailed option using CE-QUAL-
W2 or EFDC.
Low- or high-flow analysis of nutrient
loading thresholds to meet in-stream
targets
Load estimation based on tributary
and point source low-flow monitoring
Stream response using mass
balance, QUAL2E low-flow model, or
WASP
Model Output Used
to Calculate Loading
Capacity
Number of exceedance days based
on model output or monitoring data
and comparison with reference
watershed
Loading of nitrogen and phosphorus
needed to meet lake target as
simulated by lake model
Loading or concentration for critical
low-flow or average summer, or high-
flow periods
Typical              Targeted management of pathogen
Implementation       sources: stormwater, rural uses,
                    septics
                                   Targeted management of nutrient      Targeted dry or weather reductions
                                   sources: stormwater, rural uses, open  from point sources, dry season
                                   space uses, septics, point sources     nonpoint sources
Sample Case        Santa Monica, CA
Studies             http://www.swrcb.ca.aov/rwgcb4/html/
                    meetings/tmdl/tmdl  ws santa monica
                    .html
                                   Lake Ontelaunee, PA
                                   http://www.epa.gov/reg3wapd/tmdl/pa
                                    tmdl/Lake%20ontelauneeTMDL/inde
                                   x.htm
                                  Wissahickon Creek, PA
                                  http://www.epa.gov/reg3wapd/tmdl/pd
                                  f/wissahickon tmdl/index.htm

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    Table 2-2. Summary of Analysis Sequences for Analysis Categories (continued)
                                    IV
                                                    V
                                                                                                            VI
     Category
     River- Pesticides/Urban
    (Active Pesticide Sources)
                                                            River - Pesticides/Legacy
                                                          (No Current Pesticide Sources)
                                                                                                  River/Estuary- Toxics
Impairment           Mixed.  Associated with application
Conditions           dates and days when transport
                     occurs
                                   Mixed. Associated with disturbance or Mixed
                                   resuspension of historical deposits
Delivery of Pollutants
Urban runoff, typically storm drains.
Dry weather discharges including
irrigation and dumping
                                                       Historic delivery. Resuspension due
                                                       to storm events, aquatic life
                                                                                       Municipal and industrial wastewater,
                                                                                       urban runoff, agricultural runoff, other
                                                                                       sources
I
0)
•g
    General         Identification of reduction needed to
    Approach       meet water column toxicity-based
                    targets
                                                        Identification of reduction needed to
                                                        meet sediment, fish tissue, or water
                                                        column water quality toxicity-based
                                                        targets
                                                                       Identification of reduction needed to
                                                                       meet sediment, fish tissue or water
                                                                       column toxicity-based targets
     Watershed
     Loading
Source characterization
                                                       Tributary monitoring
                                                                                       Source characterization
Receiving       Allowable loading determination
Water           based on calculation from identified
Response       target at design flow or a range of
                flows
                                                       Allowable loading determination
                                                       based on calculation from identified
                                                       target at design flow or a range of
                                                       flows
                                                                       Allowable loading determination
                                                                       based on calculation from identified
                                                                       target at design flow or a range of
                                                                       flows
Model Output Used
to Calculate Loading
Capacity
Allowable load for design flow or
annual period
                                                       Allowable load for design flow or
                                                       annual period
                                                                                       Allowable load for design flow or
                                                                                       annual period
Typical               Reduction or elimination of active
Implementation       pesticide sources
                                   Removal or stabilization of deposits,
                                   long-term attenuation
                                                                                           Reduction or elimination of active toxic
                                                                                           sources
Sample Case         San Francisco Bay Area Urban
Studies              Creeks Pesticide Toxicity/Diazinon
                     TMDL, CA
                     http://www.swrcb.ca.aov/rwgcb2/urb
                     ancrksdiazinontmdl.htm
                                   Newport Bay, CA

                                   http://www.epa.gov/region09/water/tm
                                   dl/final.html
                                                                                           Newport Bay, CA

                                                                                           http://www.epa.gov/region09/water/tm
                                                                                           dl/final.html

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    Table 2-2. Summary of Analysis Sequences for Analysis Categories  (continued)
     Category
                                         VII
                                                           VIM
                                  River - Sediment
                                                   River - Temperature
                                             IX
                                      River - Biological
Impairment
Conditions
Nonseasonal: estuary infilling, pool filling
Spring: spawning/incubation
All seasons: rearing
Winter: migration (turbidity-related)
Summer/dry-warm weather
Multiple/dry-wet season
Delivery of
Pollutants
Storms and throughout the wet season over a wide
range of flows
Summer heat input
Depends on
pollutants/stressors
associated with the
impaired conditions
     General        .  Long-term loading analysis based on sediment
     Approach         budget and reference approach. Sediment
                      source analysis if full budget not possible
                   •  Turbidity/total suspended solids (TSS) events
                   •  Sedigraphs (combination of flow and
                      turbidity/TSS data)
 g  Watershed
                                            Temperature estimation based on
                                            flow, solar inputs, stream geometry,
                                            meteorologic conditions, vegetative
                                            shading, and other factors
                                  Biological reference
                                  approach, load estimation
                                  for identified pollutants
  .
<
 0)
"8
     Loading
Load estimation using sediment budget or
sediment source analysis
Estimation of inputs based on sediment yields
and delivery from land use/erosion categories
Temperature estimation based on
models of flow, travel time,
solar/meteorologic conditions.
Shade models do not address
watersheds with dams or high levels
of irrigation return flows, or cooling
water discharges.
Load estimation of
identified pollutant(s)
contributing to biological
impairment using GWLF or
similar model
     Receiving      .  Load target determined from comparison with
     Water            desired reference watershed
     Response      .  Rate of infilling
                   •  Geomorphic/habitat targets derived from
                      literature
                                               SSTEMP or SNTEMP stream flow  Comparison of estimated
                                               and temperature analysis,         watershed/source loads
                                               QUAL2E stream flow and          with loads in reference
                                               temperature analysis             watershed
Model Output Used
to Calculate
Loading Capacity
Average annual sediment load from dominant
sources to meet reference conditions.
Identification of achievable reductions by source
category
   Heat loading
   Shade dominated streams
   Effective shade allocations
   (percent of stream shade)
Annual loading
benchmarked to reference
watershed
Typical             Targeted management of sediment sources for
Implementation     long-term restoration
                                            Targeted management of vegetation
                                            and stream system, dam releases,
                                            irrigation withdrawals, or return flows
                                  Targeted management of
                                  relevant pollutant sources
Sample Case       Garcia River, CA
Studies            http://www.epa.aov/reaion09/water/tmdl/final.html
                                             North Fork Eel River, CA
                                             http://www.epa. aov/region09/water/t
                                             mdl/final.html
                                  Cooks Creek, VA
                                  http://www.deg.state.va.us/
                                  tmdl/tmdlrpts.html
    SNTEMP = Stream Network Temperature Model
    SSTEMP = Stream Segment Temperature Model
                                                             10

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    Table 2-2. Summary of Analysis Sequences for Analysis Categories (continued)
                                                                                            XI
     Category
                                   Estuary- Nutrients
                                                                 Coastal - Pathogen
Impairment
Conditions
Die-off of macrophytes, floating maps, algal blooms
Spring runoff or winter and summer dry weather
Delivery of Pollutants Annual/long-term nutrient loading from runoff, nutrients
                   associated with sediment, groundwater
                                                 Runoff/wet weather sources or dry weather sources

                                                 Direct deposition
    General
    Approach
Long-term loading, nutrient cycling, and response of
estuaries
Wet weather loading and response of estuaries
_c  Watershed
 ro  Loading
Load estimation using GWLF, HSPF, analyses of
monitoring data, or similar model
Load estimation using HSPF or direct analysis of
monitoring data
^  Receiving
"g  Water
    Response
Estuary response using Tidal Prism, WASP, EFDC, or
similar model
Response using WASP, EFDC, or similar model
                                                                    Alternatively determine correlation of coastal impairment
                                                                    with tributary loading
Model Output Used   Annual loading based on meeting estuary target condition
to Calculate Loading
Capacity
                                                 Wet and dry weather exceedance frequencies and
                                                 associated loading
Typical             Targeted management of nutrient and sediment sources:
Implementation      stormwater, rural uses, open space uses, septics, point
                   sources, irrigation return flows, fertilizer management
                                                 Targeted management of pathogen sources: stormwater,
                                                 rural uses, septics
Sample Case
Studies
(Several available nationally)
Santa Monica, CA
http://www.swrcb.ca.aov/rwacb4/html/meetinqs/tmdl/tmdl
ws santa monica.html
    Model Selection Considerations

    When addressing any impairment, selecting the appropriate model is crucial in developing a feasible, defensible and
    equitable TMDLs and load allocations. The primary factor in determining the modeling approach for a TMDL, as
    demonstrated by the analytical categories, is the pollutant and associated endpoint that represents compliance with
    water quality standards.  The TMDL endpoint is  a numeric threshold that is equated with compliance with water
    quality standards.   Some TMDL endpoints are derived directly from numeric water quality criteria  and have a
    defined magnitude, duration, and frequency (e.g., zinc expressed as a concentration in pg/1, 4-day average, l-in-3
    year frequency of exceedence).  Some endpoints are derived based on interpreting narrative criteria to  derive a
    numeric endpoint.  For example, a waterbody impaired by nuisance algal blooms could result in a TMDL that
    defines nutrient loads (total  phosphorus  [TP] and  total nitrogen  [TN])  that will  result in meeting  a  summer
    chlorophyll a endpoint of 20 pg/1. Endpoints designed to address acute (short-term) impairments are typically based
    on instantaneous maximums or daily averages while chronic (long-term)  problems  (e.g., eutrophication, sediment
    loading and deposition) are represented  by endpoints with longer durations (e.g., monthly average concentration,
    annual loading). The applicability of a model for a specific TMDL application is evaluated based on the ability to
    simulate  at  a time-scale  and  resolution appropriate for evaluation of the endpoint's  magnitude,  duration and
    frequency.  For example, if an endpoint is based on a  maximum daily concentration, a model that provides output of
    only monthly average concentration is not appropriate.
                                                          11

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Other factors that guide model selection for TMDLs
include   defining   the  waterbody   type,   sources,
necessary spatial resolution (e.g., gross watershed vs.
subwatershed vs. site-scale) and special local features
(e.g.,  surface-groundwater  interactions)   or  land
features  (e.g., wetlands).   If  management  solutions
will be evaluated, model selection must  consider  the
types of management techniques,  spatial scale of the
information, and degree of specificity required in  the
management alternatives analysis.

Special  processes  or  technical considerations  that
affect  pollutant  loading and impairment conditions
and, therefore, TMDL development are  of particular
concern in the appropriate selection and application of
models.  Models that include more complex processes
are  typically  more  difficult  to   apply,   require
significantly  more  data for setup  and  testing,  and
might include untested algorithms.  However, not all
of  the  identified  technical considerations   may  be
crucial  to include  in  a particular application—they
may not  have enough effect on the outcome  of  the
results to merit selecting a more complex modeling
approach to address them.  The standard practice in
modeling is to  identify  the  dominant processes and
identify  the simplest models sufficient  to  meet  the
needs of the project.

In   developing   TMDLs,  some    key   technical
complexities or issues are often identified. Some have
been addressed in  simplified approaches or through
the use of statistical or site-specific models.  Many of
these key technical  considerations could be addressed
through  additional  research and integration of new
physically  based   modeling  techniques   and   are
discussed further in Chapter  6.  Specific  technical
issues that have been encountered as considerations or limitations in TMDL development include the following:
Water quality standards. Provisions of state or federal law which
consist of a designated use or uses for the waters of the United
States, water quality criteria for such waters based upon such
uses. Water quality standards are to protect public health or
welfare, enhance the quality of the water and serve the purposes
of the Act (40 CFR 131.3(1))

Designated uses. Those uses specified in  water quality
standards for each waterbody or segment whether or not they are
being attained (40 CFR 131.3(f))

Criteria. Elements of state water quality standards, expressed as
constituent concentrations, levels, or narrative statements,
representing a quality of water that supports a particular use.
When criteria are met, water quality will generally protect the
designated use (40 CFR 131.3(b))

Numeric Criteria. Numeric criteria or limits exist for many
common pollutants, such as high concentrations of bacteria,
suspended sediment, algae, dissolved metals, etc. An example of
numeric criteria is "dissolved oxygen must be at least five
milligrams per liter" (i.e., dissolved oxygen > 5.0 mg/L). Numeric
criteria  are based on laboratory and other studies that test or
otherwise examine pollutant impacts on live  organisms from
different species such as frogs, fish, and insect larvae.

Narrative Criteria. Non-numeric descriptions of desirable or
undesirable water quality conditions. An example of narrative
criteria  might be that "all waters shall be free from sludge, floating
debris,  oil and scum, color and odor-producing materials,
substances that are harmful to human, animal or aquatic life, and
nutrients in concentrations that may cause algal blooms."

Chronic.  Defines a stimulus that lingers or continues for a
relatively long period of time, often one-tenth of the life span or
more. Chronic should be considered a relative term depending on
the life span of an organism. The measurement of a chronic effect
can be  reduced growth, reduced reproduction, etc., in addition to
lethality (USEPA1991 b).

Acute.  Refers to a stimulus severe enough  to rapidly induce an
effect; in aquatic toxicity tests, an effect observed in 96 hours or
less is typically considered acute. When referring to aquatic
toxicology or human health, an acute affect is not always
measured in terms of lethality (USEPA 1991b).
         Sediment - Stream bank erosion and channel adjustments can be substantial sources of sediment in urban
         and rural areas and are difficult to characterize and quantify.

         Irrigation - Irrigation can significantly alter the natural hydrology of an area, and irrigation return flows
         are a significant source of pollutants in arid regions.

         Drainage - Drainage tile can affect the hydrologic response of the watershed and can provide discharges to
         rivers.

         High  water table areas -  In areas  of high water  tables, water  fluctuations,  and surface-groundwater
         interactions affect runoff and pollutant delivery.  Wetland areas can retain water and affect water quality.

         Wetlands - Large areas of wetlands influence watershed hydrology, loading, and management options, and
         areas with wetting and drying can influence tidal areas (i.e., estuaries).

         Contaminated sediment -  Contaminated  sediment  is subject to  several  processes that  influence their
         interaction with the  water  column  and aquatic biota, including  accumulation,  movement,  burial,  and
                                                       12

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        dredging.  In many areas, contaminated sediments are the result of historical sources, limiting management
        options.

    •   Pesticides - Application of pesticides can result in water contamination  through overspray or rainfall
        during  or immediately after application.  However, pesticide monitoring data are limited, and few tested
        simulations are available.

    •   Ecological impairments - Ecological or  habitat related parameters/stressors are poorly understood or
        cannot be modeled directly.

    •   Best management practices - Data on existing management techniques are often not readily available, and
        techniques are difficult to represent accurately in models.


A number of issues that affect model selection  and application for TMDL development are not  related to the
technical representation of the  system.  General issues related to the overall TMDL process and the use of models
include:


    •   Data availability - Many TMDLs have limited local monitoring data available to support analysis, limiting
        the potential  approach options  as  well as the  confidence in modeling approaches (i.e., no  data for
        calibration).  TMDL guidance  does not require  data collection and supports the use of "available data and
        information" when possible (USEPA 1991a).

    •   Accuracy of models - TMDLs are developed with a wide range of approaches and models.  Regardless of
        the approach,  there are often concerns regarding oversimplifications, insufficient data or lack of confidence
        in complex models. No guidance is available that specifically recommends the level of accuracy  expected
        for modeling studies.
         Water quality standards formulation - TMDLs often involve some degree of interpretation of applicable
         water quality standards.  Standards may be narrative and may require a determination of a representative
         numeric value.   Other  examples include criteria that  are  not  defined precisely (e.g., no  frequency or
         duration) or situations where the  parameter included in the standards is not  suited to modeling (e.g.,
         turbidity).   Models may not be able to directly predict the endpoint associated with the water quality
         standard.
    •   Pollutant focus of TMDLs - TMDLs are developed to
        address specific impairments associated with a pollutant
        as  identified  on  the  303(d) list  (40  CFR  130.7(c)).
        Protection  of  designated uses, such  as  aquatic  life
        support,  may   require  an  approach   that  addresses
        multiple stressors and the cumulative  benefit  on the
        impaired water.  Some  stressors, such as low flow or
        poor habitat, that affect aquatic  life uses are not defined
        as pollutants under  the CWA (§ 502(6)) and therefore
        do  not require  TMDLs.  Watershed studies, which may
        or  may  not include a  TMDL, may need to address
        broader  ecological  modeling  or  multiple  stressor
        analyses.
              Pollutant vs. Pollution

Pollutant. Dredged spoil, solid waste, incinerator residue,
sewage, garbage, sewage sludge, munitions, chemical
wastes, biological materials, radioactive materials, heat,
wrecked or discarded equipment, rock, sand, cellar dirt
and industrial, municipal, and agricultural waste
discharged into water. (CWA § 502(6)).

Pollution. Generally, the presence of matter or energy
whose nature, location, or quantity produces undesired
environmental effects. In 40 CFR 130.2(c), pollution is
defined as "The man-made or man-induced alteration of
the chemical, physical,  biological, and radiological
integrity of water."
                                                     13

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14

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                               Chapter 3        What is a Model?

The term "model" describes the set of equations or algorithms that are used to simulate a physical system.  In this
report, "model" also refers to a variety of available software tools that automate the  calculation of equations or
groups of equations representing the  system. To address a specific  technical problem, an analyst may choose to
apply an existing model, apply multiple models alone or in combination, modify an existing model, or develop a
site-specific model.  Each application of a model must be designed to meet the analytical needs of the specific
system.
Model Complexity
Models are developed at various levels  of complexity,
depending on the application needs. The simplest models
provide general predictions based on  a  limited set  of
environmental or physical factors. One example might be
a loading  rate model that provides an estimate of annual
pollutant  load  as a simple  function of  land use type.
These  simplified approaches group  physical processes
and provide generalized estimates of response. Empirical
equations, that build functional  relationships based on
long-term studies and statistical analysis, are typically
used in simplified models  (e.g.,  Universal  Soil Loss
Equation  [USLE]).  Simplified techniques, due  to their
inherent generalizations, are limited in applicability  to
the various pollutants  and waterbodies  addressed by
TMDLs.  On the other end of the  spectrum are physically
based  models  that seek to describe  the fundamental
processes  that are associated with  water,  sediment, and
pollutant  movement,   transport,  transformation,  and
delivery.  Physically based models  describe fundamental
processes, such  as  infiltration, through the   use  of
scientifically based equations. The most sophisticated models will solve fundamental equations on a detailed spatial
and temporal scale. Physically based models require additional data to estimate the various parameters used in the
solution techniques.  For example, infiltration  calculations might require detailed information on precipitation,
evaporation, slope, soil conductivity, soil profiles, and vegetated cover.

The complexity of models is also a function of the spatial representation of the heterogeneity of the watershed or
waterbody.  The  simplest watershed models group large areas by land use category.  Similarly, a simplified lake
model  represents the lake as one  large unit. More detailed watershed models will represent land areas as a network
with grid cells that have  defined land  and soil features.   Other  watershed models  compromise by using a
hydrologically  based network of subwatersheds and  stream segments  to  represent  the  system.   Within each
subwatershed, the individual land use  units are "lumped"  based on similar characteristics (e.g., land use, soils,
slope).  This lumped approach simplifies  the physical representation  of the subwatershed and does not distinguish
between small parcels and contiguous parcels of land areas within a subwatershed.  Models are also distinguished by
their temporal complexity - with  simple models that use long timesteps (i.e., annual, seasonal) and detailed models
that have  timesteps of hours or minutes. Even the most detailed models are built using a combination of empirical
and physically based techniques, with varying degrees of flexibility for users to select the spatial and temporal scale
of the application.
            Additional Modeling Definitions

Field scale. Taking place at the subbasin or smaller level.
Field scale modeling usually refers to geographic areas
composed of one land use (e.g., a cornfield).

Lumped model.  A model in which the physical characteristics
for land units within a subwatershed unit are assumed to be
homogeneous.

Mechanistic model. A model that attempts to quantitatively
describe a phenomenon by its underlying causal mechanisms.

Numerical model. Model that approximates a solution of
governing partial differential equations that describe a natural
process. The approximation uses a numerical discretization of
the space and time components of the system or process.

Steady state model. Mathematical model of fate and transport
that uses constant values of input variables to predict constant
values of receiving water quality concentrations.

Dynamic model. A mathematical formulation describing the
physical behavior of a system or a process and its temporal
variability.
                                                     15

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Alternatives Analysis
Models can help evaluate and quantify the potential effects of alternative plans and operational schemes and help
understand the relationships between natural systems and  human influences on those systems.  For TMDLs and
watershed studies, models are particularly useful in evaluating the  likely benefits and drawbacks associated with
various loading alternatives and their effect on specific quantifiable endpoints that represent compliance with water
quality standards.  Central to the application of models is support for alternatives analysis.  Modeling analyses can
be used to test multiple  scenarios, with various allocations to  nonpoint and point sources (i.e., LA and WLAs).
Among the scenarios, one or more may meet water quality standards; however, some  distributions of loading may
not be  technically feasible  or accepted  by stakeholders.  Using the  model to develop an understanding of the
magnitude  of each source, its geographic  location, and the sensitivity of the receiving water  to changes in source
loading supports the selection of feasible or preferred allocations. The allocation or alternatives analysis is typically
performed based on the following discrete steps, as illustrated in Figure 3-1:
        Step 1: Application of the Model to Existing
        Conditions  - This application  represents the
        current condition (e.g., observed water quality,
        current loadings) and is compared to available
        monitoring   data  for   model  testing   and
        calibration.      Point   sources   are  set  at
        representative    discharge     concentrations,
        reflective   of   permit    monitoring    data.
        Representative concentrations may be lower or
        higher than permit limits.
                                                                                                 Total Load
                                                                    Load Reduction
                                                      Figure 3-1.  Steps for performing allocation analysis.
Step 2: Application of the Model to Existing
Conditions  with  Point  Sources  at Permit
Limits  -  This  application  establishes  the
baseline  condition, which will be reduced to
meet the allowable load.  The point sources are
set at permit limits for flow and pollutant concentration. If no permitted flow is available, the design flow
or historic observed flow can be  used.  If the permit does not include a  permit  limit for  the affected
pollutant, then the observed concentration can be used.

Step 3: Application of the Model to Future Conditions - When future growth is considered, it  can be
added to the nonpoint or point source loading contributions.

Step 4: Develop and Test Allocation Scenarios - Working from the baseline condition (Step 2, or Step 3 if
future growth is considered), sample allocation scenarios  are applied with a variety of source reductions.
These scenarios are shown as A, B, and C in Figure 3-1.  The results of each scenario are compared with
the applicable water quality standard, and scenarios are adjusted until water quality standards (or loading
capacity) are achieved.

Step 5: Select Final TMDL Scenario - Once the final TMDL scenario is selected, results are processed to
provide the required TMDL elements.
Model Development
Models include suites of equations that represent key processes.  Conventional wisdom indicates that the simplest
model sufficient  to answer management questions  with confidence should be applied.   Analysts will  need to
consider the level of complexity needed and appropriate for a given application.  Additional complexity, in the form
of more detailed simulation of physically based processes and higher spatial and temporal resolution, requires more
experience, time, data, and resources to implement.  However, the selected model will need to include sufficient
description of processes to preserve sensitivity to evaluate management techniques or alternatives and the effects on
the relevant performance measures.   In other words, if the chosen TMDL model is not capable of quantifying the
potential response of the selected endpoints to changes in source loads, that model is inadequate to the task.
                                                    16

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The complexity of a model application can also be adjusted by configuring a specific modeling system.  Typically,
detailed modeling systems include the flexibility to select processes and define the appropriate spatial and temporal
detail.  For example, the Hydrological Simulation Program—FORTRAN (HSPF) provides the ability to use detailed
descriptions of land runoff and erosion processes. But HSPF can also be applied without including explicit erosion
processes.   Simplified models are  more limited by their original  formulation and  defining assumptions.  For
example, the GWLF model does not include simulation of in-stream  processes, and no alternative formulations are
offered. The user of a model makes numerous choices during model setup that define the complexity of a particular
model application. The user defines spatial and temporal resolution, the specific processes simulated, and the level
of detail of the analysis.  For example, based on user setup selections, a model such  as Stormwater Management
Model (SWMM) can include pollutant simulation using a description of buildup and washoff of dust and dirt or a
simpler approach, where a fixed concentration (e.g., event mean concentration [EMC])  is assigned to runoff.  When
applying the model to a specific watershed  or waterbody, the user will also determine the spatial resolution of the
model—how many land use categories, subwatersheds, and waterbody features to simulate.  These decisions allow
the user to change the level of complexity from a simplified approach to a more detailed analysis.

Integration of management practices will also  affect the development of models for TMDL development and
watershed assessments. Point sources that are discrete discharges, located at well-defined discharge points, typically
will need  to be represented individually to determine  individual  WLAs.  Other management practices  for wet-
weather point sources,  including combined sewer  overflows, sanitary system overflows,  and stormwater, and
nonpoint sources  can  be represented in varying  levels  of detail depending  on the  pollutant type,  watershed and
waterbody  conditions, and  the level  of  detail of the management  planning  analysis.   In  most  states, an
implementation plan is not a  required element of a TMDL, and detailed description of BMPs is not required.
However,  increasingly, TMDL practitioners are using models to demonstrate management techniques that can be
used to achieve the needed load reductions. The 319 program guidelines also identify the  need to evaluate  load
reductions and identify management measures needed to achieve the load reductions.

The spatial detail required  for simulation of BMPs,  especially  stormwater and  nonpoint source management
techniques, place particular challenges on the development of practical and cost-effective model applications.  Most
applications use simplified estimates of BMP adoption and benefit to evaluate the potential for load reduction.  Land
use-based  management might be represented by a general representation of a reduction in loading.  For example, a
change in crop practice could be estimated by percentage reduction  in cropland loading expressed as a percentage of
the total load.  In detailed simulations, individual BMPs can be applied and their effects on water quality simulated.
For example, in an urban watershed, specific stormwater management ponds can be simulated as a hydrologic unit
and the trapping of runoff and pollutants simulated for each pond.  Although simulation of individual BMPs can be
achieved using existing modeling  systems,  the effort for data collection and modeling for  watershed-wide
applications is often too high.  The selection and placement of the specific BMPs are typically addressed later, as
part of a watershed implementation planning study. Often, implementation planning includes less rigorous modeling
and focuses more on technical and budget-related specifics.  In some studies, a "nested" model development process
is used, where a small-scale, detailed evaluation of BMP performance is used as a basis for extrapolation to a larger
watershed.  Some studies use small-scale monitoring studies and literature values of BMP effectiveness to support
watershed-wide estimates.
Integrated Modeling Systems and Linked Models
For watersheds with multiple land and water features, such as a land areas, rivers, canals, reservoirs, and estuaries,
more than one model is often needed.  In TMDL studies, representation of sources and receiving waters  often
requires two or more models. Modelers often connect or "link" models together to describe an entire system.  The
use of multiple models is necessary when multiple features of the system cannot be sufficiently described by one
model. These linkages between models (either available modeling software systems or customized systems) can be
static or dynamic. A static linkage takes output from one model and uses it as input to a second model. A dynamic
linkage can be bi-directional, where information from each timestep transfers back and forth between the models
and affects both simulations. Modelers often implement linkages through a simple file transfer system or a common
database.  Some  models or modeling software systems provide software-enabled linkages so that all file exchange
requirements are automatically performed as the models are applied.
                                                    17

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Integrated modeling systems may also provide software that facilitates data  exchange; uses common spatial and
point data  formats; and  prepares input files.   Often,  shared  tools support data management, Web-based data
downloads, model setup,  and post-processing.  Some modeling systems are based on independent models with an
open set of supporting tools.   Other systems provide a unified system with a single interface that launches and
manages several models concurrently.
Trends in Model Development
Models are needed to address the new questions that watershed managers ask that reflect the 21st century trends in
policy and environmental decision-making. Many models are applied as part of larger scale watershed management
studies that address multiple objectives, including TMDLs. Questions that models might be used to evaluate include:

    •   The implications of long-term changes in land use

    •   Competition among dischargers for limited assimilative capacity

    •   Conjunctive use of water resources for water supply, recreation, and aquatic life

    •   Management of harbors and shipping channels to maintain navigation and aquatic life support

    •   Planning for effective, targeted implementation of TMDLs

    •   Addressing multiple  concurrent programs such  as NPDES, TMDL,  Endangered Species, Wetlands, and
        Source Water Protection

    •   Cost effectiveness of management alternatives

    •   Optimization techniques to help select alternatives that minimize cost and maximize benefit

    •   Implication of global climate changes on long-term changes in water quantity and quality


New  technical challenges will be  placed  on modeling  to support environmental  decisions  and emerging
programmatic  needs.   This review will ultimately focus  on identifying those specific areas where technical
development is needed to support TMDL development and related programs. However, an initial review of existing
trends in model use can help to develop a preliminary list of key technical needs.


    •   Less-familiar pollutant types will need to be analyzed. Many studies, especially for TMDLs and watershed
        and estuary restoration, have  been performed to assess nutrients,  dissolved oxygen, sediment, pathogens,
        and metals.   But many more pollutant types will need to be addressed, including chloride, Dichloro-
        Diphenyl-Trichloroethane (DDT), polychlorinated biphenyls (PCBs), and mercury.  Existing models and
        available supporting data are limited in the range of chemical processes and pollutants they can represent.

    •   The range of source types will need to be expanded.   Typical modeling applications have focused on
        dominant, general source categories, such as "agriculture," "urban," "forest." New studies will likely need
        to  address more specific source types or source loading characteristics, such as agricultural specialty crops
        (e.g., strawberries), golf courses, or ski areas.

    •   Improved techniques are needed to address complex hydrologic conditions, such as high water tables with
        surface-to-groundwater interactions, pumped and managed systems,  dams, decreasing baseflow due to
        groundwater pumping, or complex geology (e.g., karst).

    •   Competition for resources, management of airborne sources (i.e., mercury, nitrogen), and watershed-based
        management needs will increasingly require cross-media analyses (air-land-surface water-groundwater).
                                                    18

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•   Contaminated sediment problems and the  need  to  examine restoration  alternatives  and  dredging
    implications will require more detailed simulation of sediment transport and sediment chemistry.

•   Evaluation of  designated  use support  in  waters  of  the  United  States  and watershed management
    implications will require further analysis of aquatic life and terrestrial habitat (i.e., ecological models).

•   An expanded focus on cost-effective implementation will drive technical development in modeling systems
    to include simulation of management  practices,  consider  management  cost, and include optimization
    techniques.

•   Global climate change and rapid  urbanization will require modeling of future conditions under changing
    land use and meteorological conditions, requiring more sophisticated land use and meteorologic projection
    techniques.

•   As models are increasingly used to support decisions that  result in  significant financial investment for
    restoration and infrastructure, the defensibility and accuracy of models will be challenged.  Techniques will
    be needed to support model testing, calibration support, verification, and uncertainty analysis.
                                                19

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20

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                               Chapter 4      Available Models

This review initially focuses on models that are available today for simulation of watershed and receiving water
conditions. The review emphasizes public domain models, although some selected private or proprietary models are
included if they are published, provide significant technical benefit, or are typically used in TMDL development.
Preparing the review categories considered prior model  reviews including Kalin and Hantush  (2003) and USEPA
(1997) and online systems such as EPA's Council on Regulatory Environmental Modeling (CREM) Knowledge
Base structure (http://cfpub.epa.gov/crem/knowledge base/knowbase.cfm).

Most models focus on particular land-water features; some are dominantly receiving water models, while others are
primarily oriented to calculating watershed loading. Both receiving water and watershed models can incorporate the
ability to simulate  management techniques.  For this  review, two major categories of models are recognized and
used for evaluation and comparison:


    •   Receiving water models (Hydrology, Water Quality).  This group of models emphasizes description of
        hydrology and water quality of water conveyance systems, including rivers, canals, reservoirs, lakes and
        estuaries.  Some include bi-directional flow, pumps, and operations in freshwater systems.  Others include
        evaluation  of tidal systems  and the influences of wind, waves,  and tides on mixing.  Water quality
        simulation involves representation of sediment  and pollutant transport and transformation.  Some models
        include ecological processes, such as vegetative growth, aquatic organisms and aquatic productivity.  Not
        all receiving water models address  water quality.   Sometimes, water quality functions are provided by
        linking hydrologic and water quality models.

    •   Watershed models.   This group of models emphasizes description of watershed hydrology and water
        quality, including runoff, erosion, and washoff of sediment and pollutants.  Some models include surface-
        groundwater interactions  and simplified groundwater transport.  Some also include internally linked river
        transport and water quality processes and reservoirs.


Table 4-1 provides a summary of currently available models included in this review with contact information and
support for watershed, receiving  water,  and other key features.  Some models simulate BMP  performance and
treatment capabilities. Models continue to be expanded to address multiple categories of analysis, such as watershed
models that include BMP analysis (e.g., SWMM), or receiving water models that include hydrology and water
quality (e.g., Environmental Fluid  Dynamics Code [EFDC]).  Some models are identified as "system," to recognize
that these systems support multiple models (e.g., the EPA TMDL Modeling Toolbox includes linkages between
watershed models and receiving water models).  Integrated systems are included in the list of models and include the
multiple capabilities of their component models. This review uses the model categories for descriptive purposes but
recognizes that available models may support both watershed and receiving water simulations.
                                                   21

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Table 4-1.  Summary of Available Models
Model Acronym
AGNPS
AGWA
Ann AGNPS
AQUATOX

BAblNb
CAEDYM
CCHE1D
CE-QUAL-ICM/
TOXI
CE-QUAL-R1
CE-QUAL-RIV1
CE-QUAL-W2
CH3D-IMS
CH3D-SED
DELFT3D
DIAS/IDLMAS
DRAINMOD
DWSM
ECOMSED
Full Model Name
Agricultural Nonpoint Source
Pollution Model
Automated Geospatial Watershed
Assessment
Annualized Agricultural Nonpoint
Source Pollution Model
—

Better Assessment Science
Integrating Point and Nonpoint
Sources
Computational Aquatic Ecosystem
Dynamics Model
—
—
—
—
—
Curvilinear-grid Hydrodynamics 3D —
Integrated Modeling System
Curvilinear Hydrodynamics 3D —
Sediment Transport
—
Dynamic Information Architecture
System/Integrated Dynamic
Landscape Analysis and Modeling
System
—
Dynamic Watershed Simulation
Model
Estuary and Coastal Ocean Model
with Sediment Transport
0) W 0)
|1 |£
»S »! S 73
= >< = a •= ,-8
5 ^ 5 tfl E u
1 S | S % Q. | S
Source 8 "§, 8 * 13 | g, T5
a: x a: S 3 oa w w
USDA-ARS — — • • — —
USDA-ARS — • • • • —
USDA-ARS — — • • — —
EPA — • — — — —


University of Western Australia • • — — — —
University of Mississippi • • — — — —
USACE — • — — — —
USACE • • — — — —
USACE • • — — — —
USACE • • — — — —
University of Florida, Department • • — — — —
of Civil and Coastal Engineering
USACE • • — — — —
WL | Delft Hydraulics • • — — — —
Argonne National Laboratory — — • • • —
North Carolina State University — — • • —
Illinois State Water Survey — • • • — —
HydroQual, Inc. • • — — — —
Process-based
*
*
*
*


*
•
*
•
•
•
*
*
•

*
*
*
EFDC
               Environmental Fluid Dynamics Code   EPA and Tetra Tech, Inc.
                                                     22

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Model Acronym
EPIC
GISPLM
GLEAMS
GLLVHT
GSSHA
GWLF
HEC-6
HEC-6T
HEC-HMS
HEC-RAS
HSCTM-2D
HSPF
KINEROS2
LSPC
MCM
Mercury Loading
Model
MIKE 11
MIKE 21
MIKE SHE1
Full Model Name
Erosion Productivity Impact
Calculator
CIS-Based Phosphorus Loading
Model
Groundwater Loading Effects of
Agricultural Management Systems
Generalized, Longitudinal-Lateral-
Vertical Hydrodynamic and Transport
Gridded Surface Subsurface
Hydrologic Analysis
Generalized Watershed Loading
Functions
Scour and Deposition in Rivers and
Reservoirs
Sedimentation in Stream Networks
Hydraulic Engineering Center
Hydrologic Modeling System
Hydrologic Engineering Center River
Analysis System
Hydrodynamic, Sediment, and
Contaminant Transport Model
Hydrologic Simulation Program —
FORTRAN
Kinematic Runoff and Erosion Model,
v2
Loading Simulation Program in C++
Mercury Cycling Model
Watershed Characterization
System — Mercury Loading Model
—
—
—
Source
Texas A&M University — Texas
Agricultural Experiment Station
College of Charleston, Stone
Environmental, and Dr. William
Walker (for Vermont DEC)
USDA-ARS
J.E. Edinger Associates, Inc.
USACE
Cornell University
USACE
USACE
USACE
USACE
EPA
EPA
USDA-ARS
EPA and Tetra Tech, Inc.
Tetra Tech, Inc
EPA
Danish Hydraulic Institute
Danish Hydraulic Institute
Danish Hydraulic Institute
i | i >, "8
5^5 = <8
'> "5 '> 2 S2 E s  55 ct
_ _ • _ _ •

_ __•__•
• •____•
_ _••__•
_ _•___•
• •____•
• • 	 •
_ _•___•
• _____•
• •____•
_ •••__•
_ _••__•
- • • • 	 •
• • 	 •
_ _•___•
• • 	 •
• • 	 •
• _•••_•
23

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Model Acronym
MINTEQA2
MUSIC
P8-UCM
PCSWMM
PGC-BMP
QUAL2E
QUAL2K
REMM
RMA-1 1
SED2D
SED3D
SHETRAN
SLAMM
SPARROW
STORM
SWAT
SWMM
Toolbox
Full Model Name
Metal Speciation Equilibrium Model
for Surface and Ground Water
Model for Urban Stormwater
Improvement Conceptualization
Program for Predicting Polluting
Particle Passage through Pits,
Puddles, and Ponds — Urban
Catchment Model
Stormwater Management Model
Prince George's County Best
Management Practice Module
Enhanced Stream Water Quality
Model
—
Riparian Ecosystem Management
Model
—
—
Three-Dimensional Numerical Model
of Hydrodynamics and Sediment
Transport in Lakes and Estuaries
—
Source Loading and Management
Model
SPAtially Referenced Regression On
Watershed Attributes
Storage, Treatment, Overflow, Runoff
Model
Soil and Water Assessment Tool
Storm Water Management Model
TMDL Modeling Toolbox
Source
EPA
Monash University, Cooperative
Research Center for Catchment
Hydrology
Dr. William Walker
Computational Hydraulics Int.
Prince George's County, MD
EPA
Dr. Steven Chapra, EPA TMDL
Toolbox
USDA-ARS
Resource Modelling Associates
USACE
EPA
University of Newcastle (UK)
University of Alabama
uses
USACE (Mainframe version),
Dodson & Associates, Inc. (PC
version)
USDA-ARS
EPA
EPA
0) tf) 0) ._
13 •:= 13 >> a>
5 E 5 = 
>33>7i 55 ct
_ •____•


- • • • 	 •
_ __•__•
_ •____•
_ •____•
_ __•__•
• • 	 •
• • 	 •

• • • 	 •
_ _••_•_
_ _•__•_

- • • • 	 •
- • • • 	 •
• ••••_•
24

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Model Acronym
Full Model Name
Source
                                                                             I
                                                                             ai in  01
IE  is
?!  ?§   '
~ J?  ~ a   •=
>E  .£°   S2
01 c  01 01   01
op  os   is
01 >.  01 5   5
o£ i  a: 5   5
                                                                                                     ^   5
V^l   wf   w

I  S   2
                                                                                            00  OT   OT
TOPMODEL     —
                        Lancaster University (UK),
                        Institute of Environmental and
                        Natural Sciences
WAMView
               Watershed Assessment Model with
               an ArcView Interface
                        Soil and Water Engineering
                        Technology, Inc. (SWET) and
                        EPA
WARMF        Watershed Analysis Risk
               Management Framework
                        Systech Engineering, Inc.
WASP
WEPP
WinHSPF

WMb
Water Quality Analysis Simulation
Program
Water Erosion Prediction Project
Interactive Windows Interface to
HSPF

Watershed Modeling System
(Version 7.0)
EPA 92 •____•
USDA-ARS — _••__•
EPA — •••__•

Systems, Inc.
XP-SWMM      Stormwater and Wastewater
               Management Model
                        XP Software, Inc.
 When MIKE SHE is fully linked to MIKE 11, it can be characterized as a system and is able to simulate receiving water
hydrodynamics
2 Only when WASP is used together with DYNHYD-a hydrodynamic program for WASP
USDA-ARS = U.S. Department of Agriculture, Agricultural Research Service
USAGE = U.S. Army Corps of Engineers
USGS = U.S. Geological Survey

Receiving water model simulation capabilities are examined in greater detail in Table 4-2. The type, complexity and
water quality simulation capabilities are identified for each model. Model type is categorized as follows:


    •    Steady State. These models  operate under a single nonvariable flow condition.  Steady state models are
         typically used to evaluate a design flow.

    •    Quasi-dynamic.  Quasi-dynamic models allow for limited variation, typically a variation in meteorologic
         conditions over the course of day, to examine variability.

    •    Dynamic.   These  models allow for  variations  in both flow and  meteorologic conditions  on a small
         timestep, typically shorter than daily.


Level of complexity in receiving water models is also evaluated based on spatial detail described as  one, two or
three dimensions.  Most three-dimensional models also have the ability  to be applied in one- or two-dimensional
modes.

Descriptions of water quality capabilities are based on support for specific pollutants or parameters.

Watershed model capabilities are reviewed in Table  4-3.   For watershed models, the evaluation is based on five
separate factors: type, complexity, timestep, hydrology, and water quality. Types of watershed models are generally
                                                     25

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classified as landscape only, simulating only land-based processes, and comprehensive models, including land and
conveyance systems (e.g., rivers, pipes). Complexity in watershed models is classified on three levels:


    •   Export functions are simplified rates that estimate loading based on a very limited set of factors (e.g., land
        use).

    •   Loading functions are empirically based estimates of load based on generalized meteorologic factors (e.g.,
        precipitation, temperature).

    •   Physically based  include  more physically based representations of runoff, pollutant accumulation  and
        washoff, and sediment detachment and transport. Most detailed models use a  mixture  of empirical  and
        physically based algorithms.


Timestep, a defining characteristic of models, is  often a factor in the comparison of model results to evaluate
management alternatives.  If a model  is limited to simulation of individual events, it is noted next to the  model
name.  If not specified, the model is capable of continuous simulation that provides an ongoing account of flow and
load.  The table identifies the smallest timestep supported by a model (e.g., hourly, daily).  If larger output timesteps
are needed, model output  can be  summarized from  smaller timesteps.  Hydrology  evaluation  criteria consider
whether  a  model includes  surface runoff only,  or if surface and groundwater inputs are considered. Most
comprehensive watershed models include a groundwater factor to account for baseflow contributions to streams and
rivers.  Finally,  water quality capabilities  are evaluated based  on the pollutants  or parameters simulated by the
model. Depending on the level of complexity,  the model may use various techniques to simulate the behavior of the
individual pollutants.

Management practice simulation capabilities of watershed and receiving water models are evaluated in more detail
in Table  4-4.  Some models specialize in the representation of agricultural areas and include capabilities to evaluate
various crops, crop rotations, tillage practices, and impoundments.  Other models are primarily oriented to urban
areas  and typically include the ability to evaluate various structural solutions,  such as detention  ponds.   The
simulation of management practices is evaluated based on the scale,  complexity, hydrology, and water quality.  The
final category  identified the specific BMP types considered by the model.  For BMP modeling assessment,  model
scale is defined as field, BMP, or generalized, as follows:


    •   Field practices  refers to models that assess land use management for one or more  single uniform land
        drainage area.   These models are typically used in  agricultural applications to examine crop rotation,
        tillage,  or nutrient  management practices on a small  scale or as part  of a  larger watershed modeling
        simulation.

    •   BMP refers to models that can assess one or more individual BMPs and their influence on hydrology or
        water quality loading.

    •   Generalized identifies models that include a technique to estimate the effect of management as a gross or
        larger-scale effects, typically  through the  use of percentage reductions  at the land use  or subwatershed
        scale.


Hydrology evaluation describes the  hydrologic processes of storage, overflow, infiltration and routing that typically
describe  BMPs.  These hydrologic processes are fundamental to a more physically based description  of the  BMPs
and are a basis for evaluation of related pollutant removal techniques. Water quality evaluation criteria consider the
support for various pollutants. "Types  of BMPs" provides a listing of the support for the  major or most commonly
encountered practices. "Vegetative practices" refers to BMPs that use vegetation as part of a system to slow  runoff
and help  stormwater infiltrate the  soil and settle particulates. Examples of vegetative practices include stream buffer
zones, disturbed area stabilization (with mulch, sod, permanent vegetation, temporary vegetation), filter strips,  and
grass swales.
                                                     26

-------
Each model included in the review is also described in a longer fact sheet (Appendix).  The fact sheet includes a
narrative discussion of essential features of each model and provides a comprehensive evaluation of the individual
model software,  tools,  and supporting features.   Each of the identified models was evaluated on  key technical,
practical, and software related capabilities.  The  evaluation format for the fact sheet is structured to  support future
use in a database format and facilitate comparison of models. The structure of the model fact sheets and definitions
for each category are shown in Table 4-5.


Table 4-2. Summary of Receiving Water Simulation Capabilities	
Type
                                      Level of Complexity
Water Quality


Model

ACJUAI UX
O
1 1

>. •"?
"5 »
8 §
55 O



o
ro


ro
c
O
in
ti
O -c

(vert)
ro
c
O
in
°l


— -a
ro 01
c c
0 s=
, '1 •§
£ I at
£ .= m
\--a 3




Sedime



in
Nutrient




Toxics




in
ro
13




Q
O
00



"8
Dissolv
oxygen




Bacteric


BASINS
CAEDYM
CCHE1D
CE-QUAL-ICM/TOXI    —   —
CE-QUAL-R1
CE-QUAL-RIV1
CE-QUAL-W2
CH3D-IMS
CH3D-SED
DELFT3D
DWSM
ECOMSED
EFDC
GISPLM
GLLVHT
GSSHA
HEC-6
HEC-6T
HEC-RAS
                                                   27

-------
Type          Level of Complexity                     Water Quality
o
Si I ra ra ra
i & o § § §
>, "? £ « c ' C
Model | 1 | g| o| ||
53 o Q o 5 H 5 H 5
HSCTM-2D — — • — • —




MCM — — • • — —
MIKE 11 • — • — • —


MINTEQA2 • — — — — —


QUAL2E — • — • — —
QUAL2K — • — • — —
RMA-11 — — • • • •
SED2D — — • — • —
SED3D — — • • • •
SHETRAN — — • • — —




_ _ _ _ _
Toolbox — • • • • •
W AM View — — • • — —


WASP — — • • • •
WinHSPF — — • • — —
WMS — — • • • —
XP-SWMM — — • • — —
BOD = Biochemical oxygen demand
il!s, I* i
m "~ "^ "~ " O t/) ^) ^t
(/) Q) 3 Q fl) O .;*• s> (5
Z) CO Z I— ^ CO Q O DQ
________




(Hg)
— — — — — — — —


--------


• _•__•••
• _•__•••
• ••-_••_
________
________
________






_••__•••


	 -
	
	
	 __•

                           28

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Table 4-3. Summary of Watershed Simulation Capabilities
Type


Model
AGNPS (event
based)


tt
V)
E
2
5
•

g included
_c
Stream rou
•

Level of
Complexity
in
'c
01
O
E
g
O
O
Q.
X
HI
—

in
O
5
Loading fu
—

E
2
Physically
•

Timestep


>,
! * f I
3 
-------
Type


Model
PCSWMM


in
g
Tl
5

ncluded
O)
_c
Stream rou
•
Level of
Complexity
in
o
'o
E
%
o
o
Q.
X
HI

in
O
1
a
Ol
c
^
3
•

in
s
Physically
•
Timestep


_>,
'i5
1 t
OT Q
•


|



Annual

Hydrology


Surface

jndwater
8
O)
•c
Surface an
•

•c
User-defin



Sediment

Water Quality


Nutrients

in
01
•c
|o
Toxics/pes



U)
ro
'3



Q
O
00



Bacteria
•
PGC-BMP
SHETRAN
SLAMM
SPARROW
STORM
SWAT
SWMM
Toolbox
TOPMODEL
W AM View
WARMF
WEPP
WinHSPF
WMS
XP-SWMM
                                            30

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Table 4-4. Summary of Management Practice Simulation Capabilities
HSPF
                Type     Level of      Hydrology              Water Quality              Types of BMPs

                       Complexity


                                                                                        in   w

                                                                                        s   s

                                                                                   =   ti   *        8
                a!                                                                   '«    S   2        =
               £         -a                          "8"                     .3    o-   a.        -g
               +t         Q)                  ^        C       L        (/)                 ^   fl)        -5


                I        i!&3i?i^ls2H4iii£«
    Model      2Q.    |    ra   2'gs:§£j§l'sjj]5.s'§|'S£S

               .3*^    a)    ^32>i^O(/)SIfi
               i^    00    CD    Q   fftO   Cfy*^^n    ^n   ^nno    ^^gQ


AGNPS         ••    •    ___••_••••__•_•__




AnnAGNPS      ••    •    ——  —   ••   —   ••••   —  —   •   —   •   —   —




AQUATOX      —   •    —    _____•_••___•____




BASINS         •••    •_____••••__•_•_•




DIAS/IDLMAS    —   •    •    ______•__________




DRAINMOD      •__    •   •••____•______•_




DWSM          _•_    •__••_••••__••___




EPIC           •__    •   •••__••••__••_•_




GISPLM         —   •    •    _______•_________




GLEAMS        ••_    •_••__••••_______




GSSHA         ••_    •__••_•_____••       ••




GWLF          •    —    •    ______•••_____•__
KINEROS2
LSPC
MUSIC         —   •    —    ••••••   —   —  —   —   —  —   •••••




P8-UCM        _•_    ••••_••••_•_•••_•




PCSWMM       _•_    •••••••_•___••__•




PGC-BMP      _•_    ••••••______•••••




REMM          —   •    —    •—  —   ••   —   ••••   —  —   —  —   •   —  —




SLAMM         —   •    •    •    •••__•••_•_•••••




STORM         —   •    —    —    ••_____________•
                                                  31

-------

Model
SWAT
SWMM




WARMF
WEPP

WinHSPF


XP-SWMM
Type Level of Hydrology
Complexity
d)
g -a 13
I 1 ! & 1 1 ? 1 1
11 1 i 1 s 1 1 s l
U.OQO Q CO O .£ £ 3 CO
• •— •__••_•
— •—•••••••




_•_ •_____•
• • • • • •

• • • _____••


— •—•••••••
Water Quality
c
'in
Ig! 5 1
S- o o J2 § 'c
S 2 i is I I
£ s; 01 Ji ra 01
Q. Z Q. S 00 Q
• ••--•
— • — — — •




• • — •• —


• •••• —


— • — — — •
Type
Infiltration practices
*
•




—
9

—


•
s of BMPs
Vegetative practices
Wetlands
* -
— —




— •


— —


	 	

Other structures
•
—




•


—


•
32

-------
Table 4-5. Overview of Models - Review Categories
            Categories
                                   Description
Contact Information
                                   Includes:

                                      Contact name
                                      Affiliation
                                      Address
                                      Phone number
                                      E-mail
                                      Web site
Download Information
                                   Includes location, contact, availability, and cost, if applicable, for downloading the model and
                                   related files on the Internet
Model Overview/Abstract
                                   Provides a general summary of model purpose and capabilities
Model Features
                                   Identifies the key model features characterizing the model type and simulation capabilities
                                   (e.g., lumped, nonpoint source)
Model Areas Supported
Grades the model's support for the following key features:

•  Watershed
•  Receiving water
•  Ecological
•  Air
•  Groundwater

Each feature is graded as follows:

•  High—fully supported/physically based
•  Medium—some simplifying assumptions
•  Low—empirical representation
•  None—no support
Model Capabilities
Includes the following subcategories:

Conceptual basis—summarizes of the general formulation of the model

Scientific detail—discusses specific technical components and solution techniques used in
the model

Model framework—discusses the structure of the model
Scale
Assumptions
Model Strengths
Model Limitations
Application History
Includes the following subcategories:
Spatial scale — identifies the smallest operational unit of the model (e.g., cell, watershed,
size range)
Temporal scale— identifies the model's timestep
Lists key operational or technical assumptions included in the model
Lists key strengths (technical, operational, or systems/software-related) of the model
Lists key limitations (technical, operational, or systems/software-related) of the model
Identifies past applications that demonstrate model utility and applicability and identifies
documentation of model application
Model Evaluation
                                   Summarizes any available formal testing of model, peer review, or other supporting
                                   documentation
                                                         33

-------
            Categories
                                    Description
Model Inputs
Listing of key inputs and parameters (or categories of parameters) needed for model setup
and application
Users' Guide
                                    Identifies the availability of a user's manual and where to obtain it
Technical Hardware/Software
Requirements
Listing of key computer and operational related information related to:

•  Computer hardware
•  Operating system
•  Programming language (code and interface)
Linkages Supported
Lists related or linked models or modeling systems
Related Systems
                                    Lists other or alternate interfaces for the model
Sensitivity/Uncertainty/Calibration      Identifies supporting tools or measures of sensitivity/uncertainty and calibration components
Model Interface Capabilities
Lists model interface tools (e.g., pre- and post-processors, data display tools, data
preparation tools)
References
Lists key references (selected recent or relevant articles)
                                                           34

-------
                            Chapter 5       Applicability of Models

Although a variety of models is available, the assessment of modeling needs must also consider the applicability of
models for TMDLs and watershed programs. In this chapter, the applicability of models is evaluated by matching
model capabilities to a set of  application criteria.  Applicability considers the  defining characteristics of project
applications including pollutants, land and water characteristics, management alternatives, data, and user interfaces.
The coverage provided by available models is discussed and key gaps identified.  The ability of existing integrated
modeling systems to address the application needs, through linkage of models and supporting utilities, is also
discussed.
Application Criteria
The application criteria were designed to evaluate the capabilities of currently available models to support TMDL
development and evaluation of implementation options.  The application criteria match specific TMDL modeling
needs with the modeling capabilities and processes described, the land and water features simulated, and the utilities
that support model application.  The application criteria were used to evaluate the capability of models to  perform
TMDL analyses, including training, level of effort, and user interface capabilities.  In the previous chapter, the
models were evaluated on their  basic capabilities in watershed,  receiving water, and  BMP simulation.   For this
chapter, all available models were  evaluated in each table, recognizing that each model could support multiple
criteria.  Integrated modeling systems (e.g., BASINS, Toolbox, and WMS) were evaluated on the capabilities of
their component models.
A structured sequence of application  criteria was used to
evaluate capabilities for each of five major categories. The
first application category, TMDL endpoints, considers the
ability of models to predict the magnitude, frequency and
duration of the typical endpoints (Table 5-1). Prediction of
endpoints is essential for evaluating  loading  capacity in
TMDLs and watershed simulation modeling. For example,
a wide range of models—simple models that provide only
annual  loads or complex models that perform subhourly
simulation—can  evaluate  annual  phosphorus  loading.
Evaluation of a dissolved oxygen endpoint might require a
model to evaluate hourly dissolved oxygen fluctuations.

The second application category was  designed to  identify
the capabilities of models to address specific land and
waterbody characteristics (Table 5-2).  Some models are
designed  to address  one or more waterbody  types (e.g.,
lakes and rivers) while others  are  limited  to  a single
waterbody type. The purpose of this category is to develop
an inventory that characterizes the capabilities and scope of
the available models. In practical application,  as  noted in
Chapter  2,  one  or  more  models   may  be  used  in
combination to address  multiple land and water  features
present in an individual watershed.
              Model Application Tables

TMDL Endpoints (Table 5-1). Considers the model's ability
to simulate typical TMDL target pollutants and expressions
(e.g., load vs. concentration). Characterizes the models
depending on the timestep of the simulation for the target—
steady state, storm event, annual, daily or hourly.

General Land and Water Features (Table 5-2). Rates
models according to their ability to simulate general land
uses and waterbody types.

Special Land Processes (Table 5-3). Rates models on
their ability to simulate special land  processes such as
wetlands, hydrologic modification, urban BMPs and rural
BMPs.

Special Water Processes (Table 5-4).  Rates models on
their ability to simulate special processes occurring in
receiving waterbodies such as air deposition, stream bank
erosion, algae and fish.

Application Considerations (Table 5-5).  Rates models on
the following practical considerations affecting their
application—experience required, time needed for
application, data needs, support available,  software tools and
cost.

A uniform scoring system is defined in the "key" below each
table.
Special application categories were also identified to highlight the land and water processes that are sometimes, but
not always, needed in models (Table 5-3 and 5-4).  The purpose of separating these application categories from the
general categories is  to  highlight  the  differences between  models  and identify  those  that have incorporated
                                                     35

-------
specialized physically based algorithms that might be  needed for specific applications. With these  categories
separated, the emerging capabilities are more clearly discernable.

The  last application category examines the model interface and application considerations, including data needs,
user interfaces, and availability of code (Table 5-5).  These functional descriptions help evaluate model "usability"
based on the  data  requirements  and software systems.   The  criteria are generalized for each model, although
complexity of a specific model application will vary depending on the number of endpoints, land uses, and processes
simulated.  This table evaluates  models on their typical application complexity.  In some cases, highly detailed
models  can also be applied very  simply and cost-effectively by experienced users.  For  example, HSPF could be
applied  very simply and quickly  to a small, homogeneous watershed.  Simple models, however, have  very little
variation in the level of complexity.   The design of  these  criteria recognizes that TMDLs are  often highly
constrained in data availability, application resources, and schedule.   The considerations in model selection and
application show a  benefit in many cases for models that have low data requirements and are easy to apply.  The
criteria scores recognize these considerations by showing "solid dot" or high value for low data needs and "dashes"
or low value for high data needs.  Scores for user interfaces show solid dots for good software support.

Following Tables 5-1 through  5-5 is a discussion of the capabilities and limitations of  the models based on the
model review.
                                                    36

-------
Table 5-1. TMDL Endpoints Supported
              0000—  —  —  O—  — — 000— —  00—  —  —  ———  —
AGNPS
AnnAGNPS
AQUATOX
BASINS
CAEDYM
CCHE1D
CE-QUAL-
ICM/TOXI
CE-QUAL-R1
CE-QUAL-RIV1
CE-QUAL-W2    •••••••••••••— — — — — —  •   •
CH3D-IMS
CH3D-SED
DELFT3D
DIAS/IDLMAS
DRAINMOD     —  —  —  —  •  •
DWSM
ECOMSED

EFDC

EPIC

GISPLM

GLLVHT

GSSHA
                                              37

-------
HEC-6

HEC-6T

HEC-HMS
HEC-RAS
HSCTM-2D
HSPF
KINEROS2      ___________  «  «  «
LSPC          •••••••—  —  —••••  —  •——•  •   •—  •—  •

MCM          ___________________  __e  —  e  —
Mercury Loading  	  	  	  	  	  	  	  	  	  	 	 	 	 a
Model
MIKE 11
MIKE 21        ••••••••••••••  —  •— — —  •   •—  ••   •

MIKE SHE       ________________________   _


MINTEQA2      +  +  +  +  +  +  +—  —  — — — — —++——+  —   —  —  ++   —

MUSIC         ,,,,__,____,,___________   _
P8-UCM
PCSWMM
PGC-BMP     •••••••—  —  —••••  —  •——•  •   •—  •—  •

QUAL2E        +  +  +  +  +  +  +  +  +— — — — —  —  — — — —  +   +  —  —  —  —

QUAL2K        +  +  +  +  +  +  +  +  +  +— — — —  —  — — — —  +   +  —  —  —  —

REMM         eeeeeee—  —  — eeee—  — — — —  —   —  ———  —
                                              38

-------

DMA 1 1

SFD2D

c Fmn

QUFTPAM

CI AIV/IIV/I

o
c c "§
•^ ^ "c
TO m a)
i ^ o
c go
I I I | I










Amm onia concentration
TN : TP mass ratio










DJ ssolved oxygen
Chlorophyll a
Algal density (mg/m2)
M et TSS load










TSS concentration










Sed iment concentration










Se diment load
Sulfate concentration










IVi etals concentrations










p esticides concentrations










Herbi cides concentrations
Toxics concentrations1
Pathogen count
(e.g., fecal colifonn)
Temperature
Methylmercury tissue
concentration










IVI etals sediment concentration










Mercury sediment concentration










Synt netic organic chemicals
sediment concentration










SPARROW       0000—  —  O—  — —  —  —  —  O—  —  00—   —  —  —   —  —    —

STORM          —  —  00—  —  —  —  — —  —  000—  —  —  —  —   O  —  —   —  —    —

SWAT            eeeeeeeee—  —  eee  —  eee—   e
SWMM
Toolbox
TOPMODEL
WAMView
WASP
WARMF          eeeeeeeee  —  eeeeeeee—   e   e—   ee    —
WEPP
WinHSPF
WMS
XP-SWMM
1 Entries under this category indicate that models have the capacity to simulate user-defined toxic chemicals
2 GWLF calculations are performed on a daily basis, but results are presented on a monthly basis.
Key:
—  Not supported
+   Steady State
o   Storm
<3   Annual
e   Daily
•   Hourly (or less)
                                                       39

-------
Table 5-2. General Land and Water Features Supported
                                                                   Reservoir/    Estuary    Coastal
      Model        Urban   Rural   Agriculture  Forest   River   Lake   impoundment   (tidal)  (tidal/shoreline)


AGNPS              —••—      —      —         —         —         —

AnnAGNPS           —••—      —      —         —         —         —

AQUATOX            ——        —        —00         O         —         —

BASINS              9       •        •        •      •      9         9         —         —

CAEDYM             ——        —        —••         •         •         •

CCHE1D             o       O        O        O      •      —         —         —         —

CE-QUAL-ICM/TOXI     ——        —        —••         •         •         •

CE-QUAL-R1          ——        —        —      —      o         O         —         —
CE-QUAL-RIV1 ______ _ _ _
CE-QUAL-W2 —— — —•• • • •
CH3D-IMS —— — —•• • • •
CH3D-SED —— — —•• • • •
DELFT3D —— — —•• • • •
DIAS/IDLMAS — (t (t • — — — — —
DRAINMOD —••• — — • — —
DWSM
ECOMSED

EFDC

EPIC

GISPLM

GLLVHT

GSSHA

GWLF

HEC-6

HEC-6T

HEC-HMS
                                                40

-------
                                                                   Reservoir/    Estuary    Coastal
      Model        Urban   Rural   Agriculture  Forest   River   Lake   impoundment  (tidal)  (tidal/shoreline)


HEC-RAS             ______        _         _         _


HSCTM-2D            ______        _         «         _


HSPF                o       •        •        •      •      O        o         —         —


KINEROS2            O       •        •        O      O      —        O         —         —


LSPC                o       •        O        •      •      •        •         —         —


MCM                ______        «         _         _


Mercury Loading        o       O        O        O      O      O        o         -         -
Model


MIKE 11              ______        «         _         _


MIKE 21              ——        —        —••        O         •         •


MIKE SHE            •••••—        •         —         —


MINTEQA2            ______        _         _         _


MUSIC               ______        _         _         _


P8-UCM              00000—        9         —         —
PCSWMM
PGC-BMP
• 00000 0 — —
.
QUAL2E ______ _ _ _
QUAL2K
REMM
RMA-11
SED2D
SED3D
SHETRAN
SLAMM
SPARROW


STORM


SWAT


SWMM
                                                41

-------
Model
Reservoir/ Estuary Coastal
Urban Rural Agriculture Forest River Lake impoundment (tidal) (tidal/shoreline)
Toolbox •••••• • • •
TOPMODEL
WAMView
WARMF
— •••o— — — —
>•••>> 0 — —
• • • • o • • — —
WASP —— — —•• • • •
WEPP —••• — — — — —
WinHSPF
WMS
XP-SWMM
>••••> 0 — —
>••••> 0 — —
.
Key:
-    Not supported
o    Low-Simplified representation of features, significant limitations
<3    Medium-Moderate level of analysis, some limitations
•    High-Detailed simulation of processes associated with land or water feature
                                                          42

-------
Table 5-3. Special Land Features Supported
     Model
AGNPS
                     *§  o
                           _

                     II  I
                     in  o  ra
                        E  a.
                                   Urban Land Management
                                             Rural Land Management
                                       3      8
                                                •
                                   SI  I
                             §  a-
.    = ,
t3°)50)
                                                =
                                                0   .a
                                                -
e practices
fl  I   f  I   I  jjlil  I  II                   11
<  g  J   I  00   W  2 t. W S"  S  O  !>  £    Z ;§!. — ~ °  i  H  O.   !>
                                                                  —   O   O  O
AnnAGNPS
                                                                  o   o   o  o
AQUATOX        _____    _______    _   _   _  _  a  _




BASINS         ooooo    oo   —  ooo   —    •   •   —  —  oo




CAEDYM        _____    _______    _   ___,_




CCHE1D        _____    _______    _   _____




CE-QUAL-ICM/TOXI  o   O  —  —  —    _______    _   ___,_




CE-QUAL-R1      _____    _______    _   _____




CE-QUAL-RIV1     _____    _______    _   _____




CE-QUAL-W2      _____    _______    _   ___,_




CH3D-IMS        o   —  —  —  —    _______    _   ___,_




CH3D-SED        o   —  —  —  —    _______    _   ___,_




DELFT3D        o   —  —  —  —    _______    _   ___,_




DIAS/IDLMAS      ____a    _______    _   _____




DRAINMOD       _a_a_    _______    «   _,,,_




DWSM          ____,    _______    _   __,aa




ECOMSED        _____    _______    _   ___,_
EFDC
                                                                         •  O
                                      43

-------

Model
EPIC

GISPLM
GLLVHT

GSSHA
GWLF
HEC-6

HEC-6T

HEC-HMS
HEC-RAS

HSCTM-2D

HSPF
KINEROS2
LSPC
MCM

Mercury Loading
Model
MIKE 11

MIKE 21

Urban Land Management Rural Land Management
•58 ?
-11 »
"c c <8|).i.'°g <8 ZT § ,2
ill 11 i c f i s jjil! H s
1 1 | . £| « | | | 1 £§ « g 8 |
1 i 1 1 I H5 1 i 1 . 1
li i li i jiiij j H 1 1
< § J3 i OQ SSzsHSSw'Q o > 1 z£_ 2* o t j= £ .g


_ _ _ _ a ___o_o_ o o___o


- , - . 0 ----,-- - 9 - - . -
— — — — — 0 — — — — 0 — 0 0 — — — 0




--,,,----,-- - - , 	




09090 —0—0 — 00 • • — — 90
— — — 90 — — — — 0 — — — 9 — — 9 —
— 9 — 90 —0—0 — 00 9 9 — — 9 0








MIKE SHE
                 —   9  •   •   O    ——0—000     —    00   —  —  —
                                            44

-------

Model
MINTEQA2

MUSIC
P8-UCM
PCSWMM
PGC-BMP
QUAL2E

QUAL2K

REMM

RMA-1 1

SED2D

SED3D

SHETRAN
SLAMM
SPARROW
STORM

SWAT
SWMM
Toolbox
Urban Land Management
«f «
1 I
all i I
oo_ .".? o i
1 1 I 1 I fi« | 1 I I
« Eoni fliO^oj i  =


- » 	 ---.-..
— O — — 9 OOOOOOO
— O — 99 9 O 9 9 O O —
— 9 — • • ____a__












— 9 • • 0 — 0 0—000
— 0 — 00 0000000
— 9 — — — — — —— — — —


— O — — — O O — O O O —
— O — 99 9 O 9 9 O O —
<:>••<:»<:» o c» o c» • c» c»
Rural Land Management
Nutrient control practices
(fertilizer, manure mgmt.)
Vgricultural conservation
iractices (contouring, terracing,
ow cropping)
Irrigation practices
Tile drains
Ponds


- - - - "
- - - - 3
0 0 — — 9
9 - - - .












0 00 — —
— — — — 9
0 0 — — —


• • • • 9
O O — — 9
9 9 9 • •

Vegetative practices


—
—
—
—












—
—
—


»
—
9
45

-------
                                                    Urban Land Management             Rural Land Management
Model
TOPMODEL

WAMView
WARMF
WASP

WEPP

WinHSPF
WMS
XP-SWMM
Air deposition
Wetland
Land-to-land simulation1


o • •
- » -




000
O 9 O
— o —
Hydrologic modification


»
—




0
»
»
BMP siting/placement


»
—




0
o
»
Street sweeping


o
—




—
—
»
Nutrient control practices
(fertilizer, pet waste mgmt.)


»
—




0
o
o
Stormwater structures (manhole,
splitter)


o
—




—
—
»
Detention/retention ponds


»
—




0
o
»
Constructed wetland processes


•
—




—
—
o
Vegetative practices


»
—




0
o
o
Infiltration practices


»
—




0
o
—
Nutrient control practices
(fertilizer, manure mgmt.)


»
•




•
•
o
Vgricultural conservation
iractices (contouring, terracing,
ow cropping)
Irrigation practices
Tile drains
Ponds


a a . .
- - - •




• — — o
. - - o
0 - - 0
Vegetative practices


"
—




0
o
—
 Land-to-land simulation: Model capacity to transfer runoff, sediment, and nutrients from land to land instead of from land to streams
or other receiving water.
Key:
-        Not supported
o        Low-Simplified representation of features, significant limitations
<3        Medium-Moderate level of analysis, some limitations
•        High-Detailed simulation of processes associated with land feature
                                                         46

-------
Table 5-4. Special Water Features Supported
o

IE
O 3
•a °-
— VI
Model 2 o
0=2
VI
I

Near-field ana
(mixing zone)


Airdepositior


Surface/


groundwater
interactions
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MI
Stream bank i
o
Q.
t/)

Sediment trar
Ol
§
r*t
Sediment diac
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c
Phytoplanktol
floating algae


Periphyton/
macrophytes

"O
Planktonic an
benthic algae


^
iZ
AGNPS
AnnAGNPS
AQUATOX
BASINS
                                 (t       (t
CAEDYM
CCHE1D
CE-QUAL-ICM/TOXI    _
CE-QUAL-R1
CE-QUAL-RIV1
CE-QUAL-W2
CH3D-IMS
CH3D-SED
DELFT3D
DIAS/IDLMAS
DRAINMOD
DWSM
ECOMSED           _      _      _     _





EFDC               •      •      o     O




EPIC               _      _      _     o-




GISPLM             _      _      _     _




GLLVHT             _      _      _     _




GSSHA             _      _      _     «




GWLF               _      _      _     _




HEC-6               _      _      _     _
                                              47

-------

in
O
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01
Q.
O
E
Model 2


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ng zone)1
II


eposition
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actions
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8

•c
ment transpo
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ment diagene
V)


opiankton/
ing algae
•5,13
££


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= ^
i!
0.2



ktonic and
hie algae
||



in
[L
HEC-6T
HEC-HMS
HEC-RAS
HSCTM-2D
HSPF
KINEROS2
LSPC
MCM
Mercury Loading
Model
MIKE 11
MIKE 21
MIKE SHE
MINTEQA2
MUSIC
P8-UCM
PCSWMM
PGC-BMP
QUAL2E
QUAL2K
REMM
RMA-11
SED2D
SED3D
SHETRAN
                                             48

-------
Model
SLAMM
!_ I 1
2 in ~m^~ c &
SL| sg a sz =
°= TJ 2 « 5 o S
E°: *£> a ||| ^
1 2 "1 3 I 1 2 |
Bo ra.o . t 2 « S*
tig aip .- =2* i:
Q =. z i. < w o).E w
— — — O —
Sediment transport
—
in
'in
01
1 =
I sl -8 SS
•» _o> c -e o 51
•£ ra « £.= 'E "
1 H tl 11 I
(0 Q- 5= Q- E Q. J2 u.
— — — — —
SPARROW ___________
STORM ___________
SWAT
— — — 9 —
9
— — — — —
SWMM a____a_____
Toolbox
TOPMODEL
WAMView
WARMF
WASP
9 9 O O 9
— — — 9 —
9 — — 9 0
O — 9 9 —
— — O — —
9
—
0
—
—
.
— — — — —
— — — — —
— — — — —
9999 —
WEPP ___________
WinHSPF
WMS
XP-SWMM
0 — 99 —
9
• — O O —
0
9
9
— — — — —
— — — — —
— — — — —
 Near-field is the region of a receiving water where the initial jet characteristic of momentum flux, buoyancy flux, and outfall
geometry influence the jet trajectory and mixing of an effluent discharge.  This is a specialized feature included only in the most
detailed receiving water models.
Key:
—       Not supported
o        Low-Simplified representation of features, significant limitations
9        Medium-Moderate level of analysis, some limitations
•        High-Detailed simulation of processes associated with water feature
                                                           49

-------
Table 5-5. Application Considerations
       Model
Experience  Time Needed for                Support      Software
 Required     Application     Data Needs    Available       Tools
Cost
AGNPS
AnnAGNPS
AQUATOX
BASINS
CAEDYM
CCHE1D
CE-QUAL-ICM/TOXI
CE-QUAL-R1
CE-QUAL-RIV1
CE-QUAL-W2
CH3D-IMS
CH3D-SED
DELFT3D
DIAS/IDLMAS
DRAINMOD
DWSM
ECOMSED
EFDC
EPIC
GISPLM
GLLVHT
GSSHA
GWLF
HEC-6
HEC-6T
HEC-HMS
-
• • • O • •
9 9 0 0 • •
0 0 0 0 • 0
0 0 0 0 • •
                                                50

-------
Model
HEC-RAS
HSCTM-2D
HSPF
KINEROS2
LSPC
MCM
Mercury Loading Model
MIKE 11
MIKE 21
MIKE SHE
MINTEQA2
MUSIC
P8-UCM
PCSWMM
PGC-BMP
QUAL2E
Experience Time Needed for Support Software
Required Application Data Needs Available Tools
9
— — o o o
— — 0 • •
0 0 0 0 •
— o o 9 •
0
• •909
— — 0 • •
— — O • •
— — O • •
9 • 9 0 0
9 9 9 • •
• • • O O
— O O 9 •
9 • O O •
9 • 9 9 0
Cost
•
•
•
•
•
a
•
—
—
—
•
0
•
—
a
•
QUAL2K a « a a a «
REMM
RMA-1 1
SED2D
SED3D
SHETRAN
SLAMM
SPARROW
STORM
SWAT
O 9 O O —
-
— — 0 9 9
-
— — O • •
09999
9 9 • • 9
O • 9 O —
0
•
—
—
•
a
0
•
•
•
SWMM _ o ooo*
51

-------
                        Experience  Time Needed for                  Support       Software
        Model            Required      Application     Data Needs     Available       Tools         Cost

Toolbox                      o              o             o             •             •             •

TOPMODEL                  a              a             •             9             •             •

WAMView                    o              —             O             (t             •             (t

WARMF                     o              O             000             —

WASP                       _              _             000*

WEPP                       a              «             «             o             O             •

WinHSPF                    _              o             O             •             •             •

WMS                        —              o             O             O             •             —

XP-SWMM                   _              o             O             O             •             —

Key:
Experience:                                            Time Needed for Application:   Data Needs:
-  Substantial training or modeling expertise required (generally  -  > 6 months               o  |_|jqn
   requires professional experience with  advanced watershed    o  > 3 mOnths
   and/or hydrodynamic and water quality models.)                                       a  Medium
                                                      o  > 1 month               _  . _.,,
o  Moderate training required (assuming some experience with                             •  LOW
   basic watershed and/or water quality models)               *  < 1 montn
o  Limited training required (assuming some familiarity with
   basic environmental models)
•  Little or no training required
Support Available:                                       Software Tools:              Cost:
-  None                                               -  None                   -  Significant Cost (>$500)
o  Low                                                o  Low                    o  Nominal Cost (<$500)
o  Medium                                            o  Medium                 o  Limited Distribution
•  High                                               •  High                    •  Public Domain
Capabilities and Limitations of Currently Available Models
The currently available models address many of the TMDL needs identified in Tables 5-1 through 5-5, at various
levels of complexity and difficulty.  Observations can be drawn from examination of each table to evaluate model
capabilities and limitations for the development of TMDLs and waterbody restoration plans.


    •   Endpoints supported (Table 5-1).  Of the more than 65 models reviewed, most of the models support
        some type of analysis of sediment and nutrients. Many models address related measures of eutrophication
        such as chlorophyll a and nutrient concentrations.  Some models, in particular some of the more detailed
        models, support simulation of pathogens.   However,  significantly fewer models support evaluation of
        metals (20 models) and toxics (12 models).  Contaminated sediment, herbicides and pesticides are the least
        frequently supported endpoints. Only a few highly specialized models  support mercury simulation.

    •   General Land and Water Features. All waterbodies and general land use types are supported by models;
        however, most models specialize in one of the following: land/watershed system, freshwater rivers,  lakes,
        and tidal areas.  Many comprehensive watershed models (e.g., HSPF,  LSPC, SWMM) include watersheds,
        rivers and simplified lakes.  Simulation of tidal waters is addressed  by specialized models (e.g., EFDC,
        CH3D, ECOM) that are limited  to receiving water simulation.  Development of watershed inputs for
        receiving water models  is provided by linkage with watershed models or evaluation of  monitoring data.
        Integrated modeling  systems may  include linked models that provide support for watersheds, rivers,  lakes,
                                                    52

-------
        and estuaries (e.g., EPA TMDL Toolbox).  Support for linkage between watershed and receiving water
        models, especially tidal waters, is extremely limited.

    •   Specialized Land Features.  Support for specialized land features is limited to a few models.  The most
        commonly  supported feature is simulation of impoundments such as ponds or reservoirs, often needed in
        the evaluation of stormwater management. However, although most receiving water models can simulate
        ponds, typically the models are too complex for practical application. More typically applied are simplified
        tools included in watershed models to assess stormwater management ponds (e.g., P8-UCM). Atmospheric
        deposition is an important consideration in large watershed or estuaries. The application criteria show that
        some  watershed models assess dry and wet weather deposition but do not always consider a separate
        atmospheric deposition term.  HPSF is one  of the few available models with an explicit function to
        assessing atmospheric  deposition of nutrients.  Practices such as fertilizer and manure  application are
        included in many agriculturally oriented watershed  models  (e.g., AnnAGNPS, SWAT).   However,
        irrigation and tile drainage are less frequently included.  Wetlands and BMPs that include constructed
        wetlands are also  infrequently included in models.  Similar  to  modeling of impoundments, wetland
        simulation, although possible using complex receiving water models,  is not always practical for general
        application. For example, EFDC has the capability to evaluate wetland systems within the context of a
        larger simulation of a  tidal waterbody.  For urban areas, street sweeping is included only as a distinct
        practice in traditional urban models such as SWMM, SLAMM, and P8-UCM but not included in many
        other watershed models such as HSPF and GWLF.

    •   Specialized Water Features. Only the most detailed physically based models support multiple specialized
        water features. Few models address surface-groundwater interactions in detail. Few hydrodynamic models
        can address near-field  mixing zone studies.  Only rarely do models support calculation of stream bank
        erosion.  More models address  stream sediment transport at varying levels of complexity. Few models
        include  sediment diagenesis, which can be an essential factor in the internal recycling of nutrients in lakes
        and estuaries.  This feature is increasingly significant in performing long-term projections of restoration
        potential.   Some support evaluation of multiple processes related to  algal, periphyton, and macrophyte
        species.  This is  an important feature for many  eutrophication-related TMDLs because simulation of
        aquatic  vegetation is  needed to determine allowable  loading  of nutrients.   Of the reviewed models,
        ecological processes such as fish and food chain simulation are  supported only by AQUATOX.  Many of
        the three-dimensional models used for large-scale estuary applications integrate atmospheric deposition as
        a source (e.g., ECOM, EFDC, WASP).   However, very few models incorporate irrigation and drainage
        processes,  except agriculturally  oriented systems (e.g., SWAT) or specialized drainage models (e.g.,
        DRAINMOD).

    •   Application Considerations.  Detailed  models typically require a high level of experience, significant
        amounts of data, and time for setup and testing.  Most of the models reviewed require  experience and
        training to apply; application and interpretation of even the simplest models  still require some experience in
        environmental analysis. The data requirements and time needed for application are typically associated
        with complexity.  Some models have technical support available (e.g., list servers), while others have no
        formal network for support.  Some of the propriety  models provide technical support as part of the services
        included with purchase of the systems  (e.g., XPSWMM, MIKE SHE).  Levels of support vary and are
        typically more limited for research or public domain models.  Many models include interfaces and software
        tools,  such as post-processors, which can help to make application and interpretation of model results more
        efficient.  Software tools often focus on the typical use of the model.  Models  that are actively used for
        watershed  and TMDL development typically include  specific  software  tools for calculating TMDL
        allocations (e.g., LSPC, WARMF).  Integrated systems provide support for data, software, and analysis,
        although the complexity of the systems still requires training and experience for application (e.g., BASINS,
        TMDL  Toolbox).   Few  models  include  tools  for  evaluation of  model accuracy, support  for
        calibration/validation, or sensitivity analysis.  Cost  of the models and systems varies from free distribution
        of public domain or open source code systems to  significant costs  (i.e., more  than $1,000) for privately
        maintained and distributed models (e.g., MIKE SHE, XP-SWMM).


Of the dominant pollutants identified in TMDL listing across the country, many still have significant limitations in
the availability and sensitivity of simulation techniques.  Pathogens are simulated by few watershed models, and
                                                   53

-------
accuracy of source characterization is limited.  Metals are also simulated by few watershed models with the major
limitation being speciation of metals and pH-related processes.  Nutrients  are addressed relatively well by both
watershed and receiving water models, building on a long history of eutrophication studies in lakes and estuaries.
However, some of the  more specific endpoints related to nutrients are not well described  and require more
development  of ecological models.   In addition, river models are  less likely to  include dynamic simulation of
attached algae and dynamic calculation of the input of dissolved nutrients. Simulation of stream sediment, stream
bank erosion, and channel formation is not supported by most watershed models.   However, sediment-related
aquatic  life impairment comprises more than 8 percent of TMDL listings and is likely associated with additional
listings for Biological Criteria.

The review of TMDL requirements and comparison with available models demonstrates that, although many of the
technical needs are addressed, the capabilities are distributed among  multiple models, techniques are not uniformly
available, and selection of any single model is likely to result in limitations of simulation capabilities. The available
models  also reflect the genesis of their development—as agricultural or urban models, tidal modeling systems, or
ecosystem  models—that have been only partially adapted to TMDL and restoration plan development.   The
specialized land and water features, supported by few of the available models,  include many of the technical
considerations that are present in impaired waterbodies throughout the United States. The  most promising aspect of
model development for TMDL and restoration planning support is the integrated modeling systems discussed further
in the following section.
Integrated Modeling Systems
In this section, the unique characteristics  and system of supporting tools that comprise integrated systems are
discussed further. In the previous sections, integrated modeling systems were reviewed for and categorized by the
comprehensive capabilities  of their component models.  In this section, the applicability and capabilities of the
integrated modeling systems are described and compared.   These systems are evaluated for their capabilities in
providing more comprehensive  solutions of the need for simulation and development  of management plans for
TMDLs.

Integrated systems are compilations of data support tools and  multiple models that provide a workspace or
environment for executing multiple analytical steps.  Integrated systems demonstrate a high level of support for
TMDL needs, based on the application criteria examined in Tables 5-1 through 5-5. Integrated systems can satisfy
multiple application criteria because they include the capabilities of multiple models, provide various software tools,
and  include data and  analysis  support.   Much of the recent development of  integrated  systems  for  TMDL
applications has  focused on improving efficiency and consistency of modeling applications.  Integrated systems
typically  provide linkages between data and models  and include a set of tools to quickly and efficiently build, test,
and apply models to support environmental decision-making. The development of integrated  systems has generally
focused on functionality and not on the fundamental  research and development of new models and physically based
processes.

In 1996,  the first major release of an integrated modeling system in the public domain was the BASINS modeling
system.  BASINS provided a linkage between spatial and point data and  a watershed model (HSPF) through the use
of emerging geographic information system (GIS) technology. Bundled within the  BASINS system was a series of
tools that facilitated data analysis and development of model input files.  Semi-automating various data analyses and
facilitating spatial  data processing significantly  reduced the  time and effort required for performing a basic
watershed characterization and  developing input files for HSPF. The  linkage of GIS  and  modeling technology
significantly advanced the ability of users to evaluate watershed systems  including point and nonpoint sources under
a variety  of conditions.   Since the original release, the BASINS system has continued to add models (e.g., SWAT,
PLOAD,  AQUATOX,  KINEROS) and additional  systems  (e.g., AGWA) to improve the  functionality of data
download and management tools.

The  TMDL Modeling  Toolbox, sponsored by EPA Region 4 and EPA Office of Research and Development,
Watershed and Water Quality Modeling Technical Support Center, provides a loosely linked system that is designed
to facilitate  TMDL development.  In this framework,  the models  are developed and supported individually, but
linkage is facilitated by data exchange tools and common data  management and GIS interfaces. The Toolbox has
emphasized  support for linking watershed and receiving water models.  Adding EFDC and WASP to the Toolbox
                                                   54

-------
supports the capability to evaluate watersheds, rivers, lakes, and estuaries.  Additional specialized tools were added
to address sediment and mercury impairments. WAMView provides an assessment tool for areas with high water
tables. The recent addition of the Conservational Channel Evolution and Pollutant Transport System (CONCEPTS)
provides a tool  that can assess channel sediment and  stream channel adjustments.   The system also  includes
watershed report generation tools that facilitate characterization and a database system for managing and analyzing
water monitoring data.

The WMS provides another format for an integrated modeling system, including various data management tools and
watershed models. The WMS includes  GIS, support tools, and watershed models. Most recently, WMS has added
support for a grid-based  model for  hydrologic simulation (GSSHA) and HSPF  for water quality modeling. This
system, once tested, could provide more practical applicability for grid-based models for watershed simulation and
TMDLs.

The three most commonly used and  available integrated modeling systems are BASINS, the EPA TMDL Toolbox,
and WMS (fact sheets are provided in the Appendix). The three systems are compared in more detail in Table 5-6,
with particular focus on the included analytical tools and model linkages.

Examination of the recent history in development of the three major  integrated systems discussed here  shows a
continuing expansion in three general areas—data analysis  tools, available types and complexity of models, and
linkages between models.  Data analysis tools within integrated model systems include pre-processing tools to help
understand watershed and waterbody conditions,  perform diagnostic analysis of waterbody conditions or sources,
and process data for use in model input files. Data analysis tools are also used in the evaluation and interpretation of
model output datasets. Models are being added to integrated modeling  systems to provide a variety of simple (e.g.,
PLOAD) and more detailed models addressing receiving waters (e.g., EFDC, WASP) or specific source types (e.g.,
SWAT for agricultural applications).

There is also increasing interest in developing systems that link models to each other and facilitate the linkage with
GIS tools (to spatially locate linkage points) and provide file conversion and data management capabilities.  For
larger scale TMDL applications, multiple models are often needed to evaluate source  loading and receiving water
response (e.g., watershed  and estuary models). For some TMDL applications, receiving water models are needed to
compare predicted waterbody conditions to water quality standards.   For  example, to  address dissolved oxygen
impairment in an estuary, an estuary  model might be used to  simulate eutrophication processes and the sensitivity of
dissolved oxygen concentrations to changes in nutrient loading, and a watershed model might be used to  estimate
the magnitude and sources of nutrient loading.  Watershed model  outputs in the form of discharge time series (i.e.,
daily  or hourly  flow and concentrations) provide input data at critical boundary points  of the  estuary model.
Linkages between watershed and receiving water model are typically one-directional, because the data pass directly
from one model to other, and the two models can be run separately. The watershed model output points are selected
above the head of tide so that the flow is one-directional and is not controlled by the  tidal fluctuations.  Linkages
between ground and  surface water models are  more complex,  with typically  bi-directional dynamic  linkages.
Surface and groundwater models both need to consider water table elevation and soil moisture content, and the two
models may need to run concurrently with frequent data exchange to  maintain continuity  and assess water
conservation.  Examples  of model-to-model linkages that are supported by the three integrated modeling systems
discussed here include:


    •   Watershed to receiving water—LSPC to EFDC

    •   Receiving water hydrodynamic model to water quality model—EFDC to WASP

    •   Watershed model to water quality/ecological model—HSPF or  SWAT to  AQUATOX
                                                    55

-------
Table 5-6. Capabilities of Integrated Modeling Systems
 01
 I,
 V)
           BASINS
 http://www.epa.gov/ost/basins/
       EPATMDLToolbox
http://www.epa.gov/athens/wwqtsc/
    http://wcs.tetratech-ffx.com
                                                                                            WMS1
                                                                                http://www.ems-i.com/index.html
 in
•3
GIRAS land use
Soils
Digital Elevation Model (DEM)
Reach File, version 3 (RF3) and
National Hydrography Dataset (NHD)
STORE! water quality data summary
Permit Compliance System data
WDM weather data
 303(d) listed waters
 Multi-resolution Land Characteristics
 (MRLC) land use
 Soils
 DEM
 RF3 and NHD
 Agricultural Census
 Population data
 National Resources Inventory
 erosion data
 STORE! water quality data summary
 Pesticide and fertilizer data
 Monthly weather data summary
                                                                                 DEM
                                                                                 Triangulated Irregular Network (TIN)
                                                                                 Land use
                                                                                 Soils
                                                                                 Watershed images
                                                                                 Hydrography
                                                                                 Precipitation
                                                                                 Stream stage
tn

I


I
ro
c
         Theme Manager
         Import Tool
         Data Download Tool
         Grid Projector
         GenScn
         WDMUtil
         AGWA
         Manual Delineation Tool
         Automatic Delineation Tool
         PEST  (parameter
         estimation/calibration) Predefined
         Delineation Tool
         Land Use, Soil Classification, and
         Overlay
         Land Use Reclassification
         DEM Reclassification
         Water Quality Observation Data
         Management
         Lookup Tables
                                    WCS - characterization reports
                                    (including 12 physical reports, 4
                                    water quality reports, and 5 loading
                                    reports)
                                    WCS - manual delineation
                                    WCS - automatic delineation
                                    WCS - NHD download tool
                                    LSPC data preprocessor
                                    SWMM data preprocessor
                                    NPSM data preprocessor
                                    SNPP - WASP stream network
                                    preprocessor
                                    WRDB - water resources data
                                    access and analysis
                                    Watershed Sediment Loading Tool
                                    Watershed Mercury Loading Tool
                                    EFDC Grid Generator
                                    EFDC Interface and Post-processor
                                      Map Module - defining watershed
                                      data and maps
                                      GIS Module - manipulating spatial
                                      data
                                      Terrain Data Module - processing
                                      terrain data
                                      Drainage Module -watershed
                                      delineation
                                      Hydrologic Modeling Interface
                                      River Modeling Interface
                                      Stochastic Simulations
                                      Scatter Point Module - interpolate
                                      data from scattered points to grids
                                      2D Grid Module -surface
                                      visualization

01

S




. PLOAD
. WinHSPF
. KINEROS
. SWAT
. QUAL2E
. AQUATOX

. LSPC
. PC-SWMM
. EFDC
. QUAL2K
. WASP
. WAMView
. CONCEPTS
. HEC1 (HMS)
. TR-20
. TR-55
. MODRAT
• Storm Drain
. CE-QUAL-W2
• National Flood






Frequency Program
                                                                                 (NFF)
                                                                                 Rational Method
                                                                                 HSPF
                                                                                 HEC-RAS (steady flow analysis)
                                                                                 UNET (unsteady flow analysis)
                                                                                 BRI-STARS (flow and sediment
                                                                                 transport analysis)
                                                                                 GSSHA
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   01
HSPF-AQUATOX
1 ra  .  SWAT-AQUATOX
  •S
   c
  LSPC - EFDC
  EFDC-WASP
                                                                              .  HEC1 - HEC-RAS
 Distributed by Environmental Modeling Systems, Inc. (EMS-I, http://www.ems-i.com/index.html). Similar to WMS, EMS-I also
distributes a groundwater modeling system (QMS) and a surface water modeling system (SMS).
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These types of linkages provide the capability to assess the complex waterbodies that often require consideration in
TMDLs.   Numerous other linkages are performed in practice but are not yet supported by a  specific modeling
system.  For example, HSPF has been linked with MODFLOW to address groundwater-surface water interactions.
In TMDL applications, linkages are often essential for identifying the allowable loading capacity and determining
the source loading components.

The newest trends in model integration are toward Web-based or partially Web-based systems that use the Internet
to extract, manage, and manipulate data. Integral to Web-based data systems is the adoption of uniform data storage
and management standards and formats.  Other research has emphasized building universal and flexible systems that
can be used to build model linkages. However, practical application of  many of the emerging systems is not yet
demonstrated.  Selected emerging systems include:


    •   Modular Modeling  System (MMS).   MMS provides a framework  for linking modules to  provide  a
        comprehensive  modeling  system that can  be used  to  develop  and test physical process algorithms
        (http://www.brr.cr.usgs.gov/projects/SWjrecip rirnoff/mms/).  The individual modules can be new code
        or created as executable  objects from existing models.  However, MMS places strict requirements on the
        structure of source code that comprises the modules.  Application of the  system requires experience in
        modeling and software development.

    •   Flexible Modeling  System (FMS).    FMS  (http://www.gfdl.noaa.gov/~fms/)  is designed  for the
        construction of climate  models,  and is oriented to facilitating parallel  and  vector solution techniques.
        Modules or kernels are developed  for  high-performance  solutions that are linked together based on the
        FMS structure specifications. Independent groups of researchers can  collaborate by evaluating different
        subsystems concurrently.  The system includes specific standards and a shared software environment.

    •   Spatial Modeling  Environment (SME).  SME  (Maxwell and Costanza  1994; Maxwell and Costanza
        1997; Maxwell 1999; http://giee.uvm.edu/SME3') provides an environment for linking models and solving
        analysis with parallel supercomputers.  The modeling environment is graphically based and draws from a
        generic object database.   The environment  facilitates sharing modules and reusing components in new
        configurations.  Early applications  of the system for  ecological and nutrient modeling include Patuxent
        River,  Buzzards Bay, and the Everglades Landscape Model (ELM).  One application of the SME is the
        Land-Use Evolution and Impact Assessment Model (LEAM) that provides an approach for simulating the
        evolution of urban systems by using the Cellular Automata approach combined with the open architecture
        tools (http://www.rehearsal.uiuc.edu/projects/leamA).
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                                 Chapter 6      Case Studies

This chapter includes case studies of two TMDL applications for mercury and nutrient impairments, respectively.
Case studies are included to provide an illustration of how models are applied for the purposes of developing
TMDLs.  These case studies were selected as demonstrations of the typical techniques used in recent years in
developing TMDLs for two of the most  critical pollutant types, mercury and nutrients.  Each study had particular
complexities that required the use of models to support the analysis and involved the use multiple models.

Selection of the case studies considered the type of pollutants, the use of multiple models, and the availability of the
final report and supporting documents. Each TMDL considered in the case studies is also complete and approved by
the state and appropriate EPA region.

The first case study discusses the development of mercury TMDLs in Arivaca Lake and Pena Blanca Lake, Arizona.
A combination of watershed loading model, spreadsheet analyses, and  mercury  lake cycling model is used to
describe various sources of mercury loading, in lake processes, and bioaccumulation of mercury in fish.

The second case study summarizes the TMDL development for nutrients in the Cahaba River, Alabama. This case
study demonstrates the use of multiple models to address elevated nutrient concentrations during low flow that cause
excessive periphyton (attached algae) growth  in  the  Cahaba River.   A combination of watershed hydrology
modeling, spreadsheet analyses, and river modeling are  used to examine the relationship between various low-flow
sources and resulting algal growth.

Each case study provides a description of the steps in the TMDL development process, with a clear emphasis on the
development of the modeling aspects.

    •   Background and Problem Identification, including watershed characteristics, listing information and water
        quality standards and TMDL targets

    •   Sources

    •   Model Selection

    •   Model Setup

    •   Model Evaluation

    •   Model Application
Development of Mercury TMDLs in Arivaca Lake and Pena Blanca Lake, Arizona

Background and Problem Identification

Watershed Characteristics
Arivaca Lake and Pena Blanca Lake are impoundments in rural southern Arizona in the Santa  Cruz watershed
(hydrologic unit code [HUC] 15050304) near the Mexican border. Arivaca, impounded in 1970, has a full-pool
surface area of 89 acres, a volume of 1,037 acre-feet, and a maximum depth of 25 feet. Pena Blanca, impounded in
                                                  59

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1958, has a full-pool surface area of 49 acres, a volume of 1071 acre-feet, and a maximum depth of 60 feet. Both
lakes establish strong summer stratification, which typically breaks down in October.

The  region has a semi-arid climate, with abundant rainfall only in July and August. Most of the remainder of the
annual precipitation occurs in the winter months. The watersheds are predominantly evergreen forest and shrub and
brush rangeland, and tributary inflow to both lakes is intermittent. Both lakes are managed as recreational fisheries.


Listing Information
Both Arivaca and Pena Blanca lakes were placed on Arizona's  303(d) list following detection of elevated levels of
mercury in fish tissue and issuance of Fish Consumption Advisories. The criterion used by Arizona to establish Fish
Consumption Advisories is an average concentration in target species of greater than 1 mg/kg wet weight (ppm). In
Pena Blanca Lake, average concentrations in yearly samples of largemouth bass collected from 1994 to 1997 ranged
from 1.31 to 1.53  mg/kg mercury, with individual fish samples ranging up to 2.02  mg/kg. Similar concentrations
have been observed in Arivaca Lake, with largemouth bass averages ranging from 1.03 to  1.5 mg/kg. The two lakes
were determined not to support their designated uses offish consumption.


TMDL Targets
The applicable  numeric targets for the Arivaca and Pena Blanca TMDLs are the Arizona water quality standard of
0.2 ug/1 total mercury in the water column and the Fish Consumption Guideline criterion of 1 mg/kg total mercury
concentration in fish tissue. Water column mercury  concentrations  have not been found in excess of the ambient
water quality standard; however, fish tissue concentrations have consistently exceeded the guideline value. Fish in
the lakes accumulate unacceptable tissue concentrations of mercury even though the ambient water quality  standard
appears to be met. The most binding regulatory criterion is the fish tissue concentration criterion of 1 mg/kg total
mercury, which is selected as the primary numeric target for calculating the TMDL.

Mercury bioaccumulates in the food chain. Within a lake fish community, top predators usually have higher mercury
concentrations than forage fish, and tissue concentrations generally increase with age class. Top predators are often
target species for sport fishermen, and Arizona's Fish Consumption Guideline is based on average concentrations in
a sample of sport fish. Therefore, the criterion should not  be applied to the extreme case of the most-contaminated
age class of fish within a target species; instead, the criterion  is most applicable to an average-age top predator.
Within Arivaca Lake  and Pena Blanca  Lake, the top predator sport fish is the largemouth bass. A site-specific
spreadsheet model was developed to evaluate lake water quality  model output and predict mercury concentrations in
fish tissue for each age class at each trophic level. Average mercury concentrations in fish tissue of target species are
assumed to be approximated by average concentration in 5-year-old largemouth bass. In the May 1995 sampling of
Pena Blanca Lake, the average mercury tissue concentration in largemouth bass (1.31 mg/kg) was slightly lower
than the average concentration in 5-year-old largemouth bass (1.35 mg/kg), and the average concentrations  in all
other sampled species were lower than that in largemouth bass. Therefore, the selected target for the TMDL analysis
is an average tissue concentration in 5-year-old largemouth bass  of 1.0 mg/kg or less.
Source Assessment
There are no permitted point source discharges and no known sources of mercury-containing effluent in the Arivaca
or Pena Blanca watersheds. External sources of mercury load to the lake include natural background load from the
watershed, nonpoint loading from past mining activities, and atmospheric deposition.


Watershed Background Load
The watershed background load of mercury derives from mercury in the  parent rock and from the net effects of
atmospheric deposition of mercury  on the watershed. Because no  near-field  significant  sources  of mercury
deposition were identified, mercury from atmospheric deposition onto the  watershed is treated as part of a general
watershed background load in this analysis.  Atmospheric deposition of mercury occurs throughout the world, and
mercury enters these watersheds through both wet deposition (precipitation) and dry deposition. As described below,
atmospheric deposition is estimated to contribute more than 12 micrograms of mercury per square meter per year
(ug/m2/yr).  The direct atmospheric loading to the lake is greater than the total estimated load of mercury from the
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watershed to the lake; however, portions of the atmospheric mercury deposition do not enter the lake because they
are recycled to the atmosphere or sequestered within the watershed.

Mercury is also  present within the parent rock formations of the Pena Blanca and Arivaca watersheds.  Cinnabar
(HgS), the primary naturally occurring ore of mercury, typically consists of 86.2 percent mercury and 13.8 percent
sulfide. Cinnabar occurs as impregnations and vein fillings in near-surface environments from solutions associated
with volcanic activity and hot springs.  Cinnabar also may occur in placer-type concentrations produced from the
erosion of mercury-bearing rocks. In the Pena Blanca watershed, cinnabar has been reported to occur as traces in
irregular and lensing fissure veins in association with argentiferous galena, pyrite, marcasite, and chalcopyrite.

The net contributions of both atmospheric deposition and weathering of native rock were assessed by measuring
concentrations in sediment of tributaries to Arivaca Lake and Pena Blanca Lake. Based on these data, as well as
three background sediment samples from just outside the Arivaca Lake watershed (in areas expected to be relatively
uncontaminated by anthropogenic sources of mercury), most of the sediment samples from the Arivaca and Pena
Blanca watersheds  may be considered at or near background  mercury levels.  In  the Pena Blanca watershed,
sediment mercury concentrations were below 100 parts per billion (ppb), except for samples at and just downstream
of an old gold mine tailings pile found during reconnaissance. The sample just below the tailings pile showed an
extremely elevated concentration of 555,000 ppb. In the Arivaca watershed, sediment mercury concentrations were
below 150 ppb,  except for samples at  and just downstream of the Ruby Dump site, in the  southern end of the
watershed. Samples within Ruby Dump  had mercury levels as high as 1467 ppb.


Nonpoint Loading from Past Mining Activity
The mining of precious metals such as  gold and silver was common in the Parajitto mining area surrounding Pena
Blanca Lake. It  was also  common in the area surrounding Arivaca Lake,  but apparently not within the Arivaca
watershed itself.

Before the introduction of cyanidation  technology at the beginning of the 20th century, mercury-amalgamation of
precious metal ores it was a common practice throughout the western United States, using mercury to amalgamate
gold ore in ball mills. Ball mill process  mercury is likely to be of greater concern for environmental impact because
the residue is more likely to contain soluble species of mercury than low-solubility cinnabar outcrops. Studies of the
highly contaminated Carson River area in Nevada demonstrate  that the dominant  form  of mercury present in
amalgamation-process tailings is still  elemental mercury,  approximately a century after peak mining activity, while
stream sediments in the tailings area were dominated by elemental and exchangeable forms of mercury. Significant
conversion to  relatively insoluble cinnabar occurs only when these materials  are  transported to more anoxic,
reducing environments with concentrations of labile sulfur in excess of 0.1 percent by weight. Thus, the mercury
contained in ball mill tailings  is likely to be more mobile and more bioavailable than the mercury  contained in
cinnabar in the watershed  soils and tailings residue from hard rock mines (which were not processed by mercury
amalgamation).

One ball mill site has been identified in the Pena Blanca watershed, associated with the St. Patrick Mine and with a
tailings pile adjoining an intermittent stream bed. In June  1999,  30 samples were collected from the  tailings pile,
mill  site, and adjacent streambed site.  Samples from outside of the tailings pile generally  revealed low levels of
contamination (from nondetectable up  to 15 mg/kg).  Seven samples collected from the tailings pile gave higher
results, ranging from 63 to 460 mg/kg  total mercury. These results confirm that the tailings pile is a mercury hot
spot.

Reconnaissance efforts in the Arivaca watershed have not located any obvious ball mill sites within the watershed.
Although the possibility cannot be ruled out, the likelihood of finding previously unknown additional mill sites or
tailings piles in the Arivaca drainage is  low. No detectable mercury was found at two known mine shaft sites in the
watershed. However, somewhat elevated levels of mercury were found within the old Ruby Dump, in the southern
end of the watershed. Ruby Dump is located in the southern portion of Arivaca watershed, at the very upstream end
of Cedar Canyon Wash. The dump apparently served the town of Ruby and the Montana Mine. This former mining
town is located about 1 mile southwest of the dump site, outside the Arivaca watershed.
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Atmospheric Deposition
The third component  of mercury loading is direct  atmospheric  deposition to the lake surface.  Atmospheric
deposition is often separated into near-field, or local sources, and far-field sources. Elevated near-field deposition is
often found downwind of coal-fired power plants, smelters, and lime kilns. A variety of potential near-field sources
was evaluated in the United States and Mexico. Based on the lack of major nearby sources, particularly sources
along the axis of the  prevailing wind, near-field atmospheric deposition  of mercury  attributable to individual
emitters is not believed to be a major component of mercury loading to the Arivaca and Pena Blanca watersheds.

Long-range  atmospheric deposition is a major source  of mercury in many parts of the country.  A study of trace
metal contamination of reservoirs in New Mexico indicated that perhaps  80 percent of mercury found in surface
waters was coming from atmospheric deposition. In other remote areas (e.g., in Wisconsin, Sweden, and  Canada),
atmospheric deposition has been identified as the primary (or possibly only) contributor of mercury to waterbodies.

Wet deposition of mercury has been measured by the Mercury Deposition  Network in its first year of operation
(February 1995-February 1996), the Mercury Deposition Network found a volume-weighted average concentration
of 10.25 ng/L total mercury in precipitation at 17 stations located mainly  in the upper Midwest, Northeast, and
Atlantic seaboard (http://nadp.nrel.colostate.edu/ NADP/mdn/mdn.html). Volume-weighted average concentration
of mercury did vary by station, ranging from 3.62 ng/L at Acadia National Park, Maine, to 13.56 ng/L at Bondville,
Illinois. Average weekly wet deposition at the 17 stations ranged from 63 ng/m2 to 280 ng/m2.

Only limited monitoring of atmospheric deposition of mercury is available in the Southwest and none in Arizona.
Dry deposition were measured in the Pena Blanca watersheds (Caballo data), but the monitoring location is about
150 miles closer  to the subject lakes than the Pena Blanca lakes. Lack of geographically  closer monitoring
introduces considerable uncertainty; however, as shown below, direct atmospheric  deposition appears to account for
only a  small  portion  of  the total mercury  load  to  the  lake. Even if  the direct  atmospheric loading rate is
underestimated by a significant amount,  it would  have only a minor effect on the predicted lake response. The
Caballo data therefore were selected to characterize mercury wet deposition to the lake surfaces. The short period of
record available was extrapolated to provide estimates across the period  of simulation. Two  approaches were
considered to  make this extrapolation:  development of a relationship between mercury  concentration and rainfall
volume, and calculation of average  deposition rates. The first approach is based on the observation that mercury wet
deposition concentrations  are typically inversely related to rainfall volume. There is considerable  scatter in this
relationship  in the Caballo data, particularly at low precipitation volumes. Given this scatter and the short period of
record available, the concentration  approach was rejected. Instead, it was assumed that cumulative deposition mass
was a  more robust estimator than concentration.  To make maximum use of the available data,  the series of all
possible running 12-month sums were calculated and then averaged, yielding an average annual deposition rate of
4.125 ug/m2-yr (79 ng/m2-wk). This annual sum was then apportioned to months based on the observed deposition
pattern from May 1997 through April 1998.

The Caballo station does not measure dry deposition.  Although there are few direct measurements to support well-
characterized estimates, dry deposition of mercury often is assumed to be approximately  equal to wet deposition
(e.g., Lindberg et al., 1991), as is reported in the Pena Blanca Lake. Because the climate at Arivaca and Pena Blanca
is wetter than at Caballo, the distribution of wet and dry deposition is likely to be different. Total mercury deposition
at Arivaca/Pefia Blanca is assumed to equal that estimated for Caballo, New Mexico, but Arivaca/Pena Blanca are
estimated to receive  greater wet deposition and less dry deposition than Caballo because more of the paniculate
mercury and reactive gaseous mercury that contribute to dry deposition will be scavenged at a site with higher
rainfall.
Model Selection
The TMDLs needed to be completed on a short time line established in a consent decree and with limited resources.
This condition required focusing efforts  on those aspects of the problem that were most important to the decision
process. Of the many physical and chemical processes linking mercury sources to bioaccumulation in fish, some
were, of necessity, addressed through simple  scoping  models, while for other components, highly sophisticated
methods were used. Focusing the modeling effort  was a key factor in successful completion of the TMDLs and
depended on two factors:  use of a cross-sectional  comparison (using a reference lake) and collection of a high-
quality dataset.
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The Mercury Cycle
Development of the risk  hypothesis, and therefore  selection  of appropriate modeling approaches, requires  an
understanding of how mercury cycles in the environment. Mercury chemistry in the environment is quite complex.
Mercury has the properties of a metal (including great persistence due to its inability to be broken down) but also
has some properties of a hydrophobic organic chemical due to  its ability to be methylated via a bacterial process.
Methylmercury, easily taken up by organisms, tends to bioaccumulate; it is very effectively transferred through the
food web, magnifying at each trophic level. This transfer can result in high levels of mercury in organisms high on
the food chain, despite  nearly immeasurable quantities of mercury in the water column. In fish, mercury is not
usually found in levels high enough to cause the fish to exhibit  signs of toxicity, but wildlife that habitually eat
contaminated fish are at risk of accumulating mercury at toxic  levels, and the mercury in sport fish can present a
potential health risk to humans.

Mercury and methylmercury form strong complexes with organic substances (including humic acids)  and strongly
sorb onto soils and  sediments. Once  sorbed to organic matter,  mercury can be ingested  by  invertebrates, thus
entering the food chain. Some of the  sorbed mercury will settle to the lake bottom; if buried deeply enough, mercury
in bottom sediments will become unavailable to the  lake  mercury cycle. Burial in bottom sediments  can be  an
important route of removing mercury from the aquatic environment.

Methylation and demethylation play an important role in determining how mercury will accumulate through the
food web. Hg(II) is methylated by a biological process that appears to involve sulfate-reducing bacteria. Rates of
biological methylation of mercury can be affected by a number of factors. Methylation can occur in water, sediment,
and soil solution under anaerobic conditions and, to a lesser extent, under aerobic conditions. In lakes, methylation
occurs mainly at the sediment-water  interface and at the oxic-anoxic boundary  within the water column. The rate of
methylation is affected by the concentration of  available Hg(II),  microbial concentration, pH, temperature,  redox
potential, and the presence of other chemical processes. Demethylation of mercury is also mediated by bacteria.

Note that both Hg(II) and methylmercury (MeHg) sorb to algae  and detritus, but only methylmercury is assumed to
be passed up to the next trophic level  (inorganic mercury is relatively easily egested). Invertebrates eat  both algae
and detritus, thereby accumulating sorbed MeHg. Fish eat the invertebrates and either grow  into larger fish (which
have been  shown to have higher body burdens  of mercury) or are eaten by  larger fish. At each trophic level, a
bioaccumulation factor must be assumed to represent the magnification of mercury concentration that occurs up the
food chain.

Typically, almost all of the mercury found in fish (more than 95  percent) is in methylmercury form.  Studies have
shown that fish body burdens of mercury increase with increasing size or age  of the  fish, with no signs of leveling
off.

Although it is important to identify sources of mercury to the lake, there may be fluxes of mercury within the lake
that would continue nearly unabated for some time, even if all  sources of mercury to the lake were eliminated. In
other words, compartments within  the lake  probably currently store a significant  amount of mercury, and this
mercury  can continue to cycle through the system even without an ongoing outside source of mercury. The most
important store of mercury within the lake is likely to be the bed sediment. Mercury in the bed sediment  may cause
exposure to biota by being:


    •   Resuspended into the water  column, where it is ingested or it adsorbs to organisms that are later ingested.

    •   Methylated by bacteria. The methylmercury tends to attach to organic  matter, which may be ingested  by
        invertebrates and thereby introduced to the lake food web. Methylmercury poses the real threat to biota due
        to its strong tendency to accumulate in biota and magnify up the food chain.
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Data Collection
Unfortunately, much of the historic database on environmental mercury concentrations is  suspect, due to high
detection limits and potential contamination due to  lack of ultra-clean sampling and analysis techniques. Further,
while methylmercury concentrations are key to predicting bioaccumulation, the methylated component is rarely
measured.

To develop a defensible TMDL linkage analysis, high-quality data were needed to describe mercury distribution and
movement in the waterbodies and their watersheds, but time and resources for data collection were limited. During
two  sampling events representing stratified and unstratified lake conditions, data were collected using ultra-clean
techniques on mercury species in biota, mercury species and general chemistry in the water column and sediments
of both lakes. Sampling of inflow was not possible, given the highly intermittent nature of runoff. Watershed
sampling therefore focused on evaluating mercury concentrations and sediment characteristics in the beds of the
intermittent  stream networks feeding each lake. Another important  aspect of data collection was  detailed field
reconnaissance. While there  are  no permitted point sources or active  mines  in either  watershed,  the field
reconnaissance, together with evidence from stream sediments, identified an important mercury source area in old
ball-mill tailings in the Pefia Blanca watershed.

Summer stratified surface water concentrations in both lakes were low (about 4 ng/1 total mercury in Pefia Blanca
and  8  ng/1  in Arivaca),  but increased with depth, reaching  20 to  40  ng/1 near the sediment. Methylmercury
concentrations below the hypolimnion were 4 ng/1 in Pefia Blanca and 14  ng/1 in Arivaca. Higher concentrations
were found in lake sediment, ranging up to 470 ppb in Pefia Blanca and 192 ppb in Arivaca. Surveys of watershed
sediments revealed higher concentrations. Within Pefia Blanca watershed, concentrations ranged up 554,937 ppb dry
weight and  in Arivaca watershed up to 1,222  ppb  dry  weight; however, most samples were less than 100 ppb.
Background concentrations  collected in an area just outside the Arivaca watershed believed to be relatively
uncontaminated by anthropogenic  sources ranged from 12 to  197 ppb mercury, consistent with other studies of
background  mercury  levels in soils. Thus, both watersheds appear to  be largely in the range of background
measurements, with isolated mercury hot spots.


Cross-Sectional/Reference Site Approach
The  complex nature of mercury cycling in the environment can introduce considerable uncertainty into  linkage
analysis modeling. From examination of a single waterbody, it is difficult to determine the relative contributions of
gross mercury loading, internal mercury cycling, and rates of mercury methylation and food chain accumulation to
observed body burdens in fish.

Additional  constraints on the analysis can be developed by examining several  lakes  within  the same  region
simultaneously (cross-sectional approach). Explaining the differences in mercury load, cycling, and bioaccumulation
among several lakes provides a robust basis on which  to develop the conceptual model. Therefore, the  linkage
analysis for  Arivaca Lake was developed simultaneously with analyses for Pefia Blanca Lake and Patagonia Lake.
Patagonia Lake is within the same region, yet it has acceptable fish tissue mercury concentrations. Patagonia thus
serves as an unimpaired reference site for the cross-sectional analysis.  The basic physical characteristics of the three
lakes and their watersheds are compared in Table 6-1.

All three lakes lack known point source discharges of mercury and have a fairly similar distribution of rural
rangeland and forest land uses. The Patagonia watershed has far more historical gold mining operations (but also a
much larger watershed area), but it is  not known how many (if any) of the Patagonia mines are associated with
mercury-contaminated ball mill sites. EPA has not detected elevated sediment mercury in the  Patagonia watershed.
Physically,  Patagonia differs  from Pefia  Blanca and Arivaca because  it has a much  larger volume,  a larger
contributing watershed, and a shorter hydraulic residence  time. Patagonia is also  the deepest of the three lakes.

EPA collected data from all three lakes and their watersheds in July 1998, providing a valuable basis for cross-
sectional comparison. All three lakes were strongly stratified with anoxic hypolimnia at the time of sampling.
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Table 6-1.  Cross-Sectional Comparison of Studied Lakes
Characteristic
Surface area (acres)
Volume at full pool (acre-feet)
Average depth (ft)
Maximum depth (ft)
Estimated hydraulic residence time
(yrs), 1985-98 average
Watershed area (acres)
Rangeland (acres)
Evergreen Forest (acres)
Cropland and Pasture (acres)
Urban and Residential (acres)
Water (acres)
Pena Blanca Lake
49
1071
21.8
60
0.36
8820.6
845.9
7906.7
0
33.2
34.8
Arivaca Lake
90
1050
11.7
25
0.33
12696.4
5761.3
6421.1
420.3
26.5
67.3
Patagonia Lake
200
11000
29.1
86
0.16
145904
55509.7
88503.8
1204.2
408.2
278.1
Producing mines identified in MILS     4 inactive
88 inactive

6 active
Mines producing gold
                                 2 inactive
51 inactive

1 active
Note: "Active" mines include those on temporary shutdown as of the 1995 MIL. Prospects are omitted from the tabulation.

At the time  of the July sampling, all three lakes had similar total mercury concentrations in the sediment but very
different concentrations in the water column. Lake sediment concentrations in Pena Blanca were somewhat elevated
relative to Arivaca and Patagonia. All three lakes showed significant amounts of methylmercury in sediment, but
Patagonia, unlike Arivaca and Pena Blanca, did not have much methylmercury in the water column. This condition
seems to explain why fish have unacceptable levels of mercury contamination in Arivaca and Pena Blanca but not in
Patagonia.

The July data emphasize that there may be little correlation between the total mercury mass stored in lake sediments
and  mercury concentration in  fish.  Sediment concentrations in Patagonia Lake  of both  total mercury  and
methylmercury  were higher  than those observed  in Arivaca,  yet  Patagonia Lake has acceptable  fish tissue
concentrations while Arivaca does not. Sediment concentrations of total mercury in Pena Blanca were three times
those in Arivaca, but total mercury concentrations in the water column were  about twice as high in Arivaca as in
Pena Blanca. These observations—indicating that total mercury concentrations  in sediment are not linearly related to
fish body burden—suggest that  the linkage analysis requires a model that can describe the relationship between
external mercury load and methylmercury generation.

Why are mercury levels in the water column higher in Arivaca and Pena Blanca than in Patagonia, despite rather
similar sediment  concentrations?  Strong clues emerge from the water column chemistry results from the July
sampling. As shown in Table 6-2, sulfate is strongly elevated in the hypolimnion of Patagonia relative to the other
lakes, while alkalinity and pH are also elevated, and dissolved organic carbon (DOC) is somewhat depressed.
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These  observations  suggest  that  relatively high  sulfate concentrations  (under alkaline  conditions)  promote
precipitation  of cinnabar  in  Patagonia, thus reducing  water  column concentrations.  Differences in sediment
chemistry might also play an important role. The sediment of Patagonia Lake has a stronger reducing environment
and lower organic carbon content than the other two lakes.  Finally, Patagonia is the deepest lake, which might
reduce growth of algae and photosynthetic bacteria at the sediment interface.
Table 6-2. Comparison of Summer Hypolimnetic Water Chemistry between Studied Lakes
Parameter
Sulfate (mg/L)
Alkalinity (mg/L)
pH
DOC (mg/L)
Total Hg (ng/L)
MeHg (ng/L)
Total Hg in sediment (|Jg/kg)
MeHg in sediment (|Jg/kg)
Patagonia
185
156
7.5
7
2
0.8
148
0.45
Arivaca
0.2
91
6.6
24
38
14.3
129
0.30
Pena Blanca
7
86
7
10
20
3.9
360
0.95
Risk Hypotheses
In sum, the key differences among the lakes appear to be in water chemistry and in consequent effects on mercury
speciation and cycling, rather than in gross total mercury load (as indicated by sediment concentration). Prior to
model development, this understanding was summarized in the following risk hypothesis:


    1.  Mercury concentrations in fish are driven by summer methylmercury concentrations in the epilimnion.

    2.  Summer methylmercury  concentrations in the  epilimnion  are  driven by mixing from methylmercury
        concentrations in the hypoxic zone just below the thermocline.

    3.  Methylmercury concentrations below the thermocline are determined primarily by water chemistry and its
        effect on mercury methylation in the anoxic portion of the water column and cycling between the water and
        sediment, and secondarily by mercury concentration in the sediment or gross mercury loads.

    4.  Total mercury concentration in the  sediments is driven by watershed loads but reflects accumulation over
        relatively long periods of time and changes slowly.


For each lake, the linkage analysis  components described in  the following  sections are designed to  provide a
quantitative investigation of this risk hypothesis. The linkage  tools are  separated into several general components.
The first two components address the watershed,  and the third and fourth address the lake itself. First is a watershed
hydrologic and sediment loading model, which represents the movement of water and sediment from the watershed
to the lake. This model supports the second component, an analysis of watershed loading of mercury to the reservoir.
A lake hydrologic model is the third component. Finally, a model of lake mercury cycling and bioaccumulation is
used to address the cycling of mercury in the  lake among  and between  abiotic  and biotic components. When
combined, these components are the TMDL linkage analysis.
                                                   66

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Model Setup

Watershed Hydrologic and Sediment Loading Model
An analysis of watershed loading could be conducted at many different levels of complexity, ranging from simple
export coefficients to a dynamic model  of watershed loads.  Data are not available, however, to parameterize or
calibrate a detailed representation of flow and sediment delivery within the watersheds.  Therefore, a relatively
simple, scoping-level analysis of watershed mercury load, based on an annual mass balance of water and sediment
loading from the watershed, is used for the TMDL. Uncertainty introduced in the analysis by use of a simplified and
uncalibrated watershed loading model must be addressed in the Margin of Safety.

Watershed-scale loading of water and sediment was simulated using the GWLF model (Haith et al. 1992).  The
complexity of this model falls between that of detailed simulation models,  which attempt  a mechanistic, time-
dependent representation of pollutant load generation and transport, and simple export coefficient models, which do
not represent temporal variability. GWLF provides a  mechanistic, simplified simulation of precipitation-driven
runoff and sediment delivery, yet is intended to  be applicable without  calibration. Solids load, runoff, and
groundwater seepage can then be used to  estimate paniculate and dissolved-phase pollutant  delivery to a stream,
based on pollutant concentrations in soil, runoff, and groundwater.

GWLF simulates runoff and streamflow by a water-balance method, based on measurements  of daily precipitation
and average temperature. Precipitation is partitioned into direct runoff and  infiltration using a form of the SCS
Curve  Number method. The Curve Number determines the amount of precipitation that runs  off directly, adjusted
for antecedent  soil moisture based on total precipitation in the preceding 5 days. A separate Curve  Number is
specified for each land use by hydrologic soil  grouping. Infiltrated water is first assigned to unsaturated zone
storage, where it may be lost through evapotranspiration. When storage in the unsaturated zone exceeds soil water
capacity, the excess percolates to the shallow saturated zone. This zone is treated as a linear reservoir that discharges
to the stream or loses moisture to deep seepage, at a rate described by the product of the zone's moisture storage and
a constant rate coefficient.

Stream flow may derive from surface runoff during precipitation events or from groundwater pathways. The amount
of water available to  the shallow groundwater zone is strongly affected by evapotranspiration,  which GWLF
estimates from available moisture in the unsaturated zone, potential evapotranspiration, and a cover coefficient.
Potential evapotranspiration is estimated from a relationship to mean daily temperature and the number of daylight
hours.  In the arid Southwest, evapotranspiration often exceeds moisture supply, so stream runoff occurs sporadically
in response to precipitation exceeding infiltration capacity. All the streams feeding Arivaca Lake are classified by
USGS as intermittent and lack a consistent base flow component.

Monthly sediment delivery from each land use is computed from erosion and the transport capacity of runoff, and
total erosion is based on the Universal Soil Loss Equation (Wischmeier and Smith 1978), with a modified rainfall
erosivity coefficient that accounts for the precipitation energy available to detach soil particles (Haith and Merrill
1987). Thus, erosion  can occur with precipitation but no surface runoff to the stream; delivery of sediment, however,
depends on surface runoff volume. Sediment available for  delivery is accumulated over a year, although excess
sediment supply is not assumed to carry over from one year to the next.

GWLF application requires information on land use, land cover, soil,  and parameters that  govern runoff, erosion,
and nutrient load generation.


Watershed Mercury Loading Model
Estimates of watershed mercury loading are based on the sediment loading estimates generated by GWLF through
application of a sediment potency factor. A background loading estimate was first calculated, then combined with
estimates of loads from individual hot spots.

The majority of the EPA sediment samples showed no clear spatial patterns in  sediment mercury concentrations,
with the exception of the "hot spot" areas identified at Ruby Dump and the St. Patrick Mine  tailings pile. Therefore,
background loading  was  calculated using the  central tendency of  sediment  concentrations from all samples
excluding the  hot spots.  The  background  sediment  mercury concentrations  were assumed to  be  distributed
                                                    67

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lognormally, as is typical for environmental concentration samples, and an estimate of the arithmetic mean was
calculated from the observed geometric mean and coefficient of variation. Applying this assumption to the GWLF
estimates of sediment transport yields an estimated rate of mercury loading from watershed background of 178.9
g/yr. This load is  ultimately derived from a combination of atmospheric deposition on the land, naturally occurring
mercury in rocks underlying the watershed, and dispersed human activities.

Loading from the Ruby Dump and St. Patrick mine area are calculated separately but are also based on the GWLF
estimate of sediment load generated per hectare of rangeland  (the land use surrounding the hot spots), as reduced
by the sediment delivery ratio for the watershed.

Based on assumptions  regarding hot spot size and sediment load multipliers, less than 1 percent of the watershed
mercury load to Arivaca Lake appears to originate from Ruby Dump, which is the  only identified hot spot in the
watershed.   Given the uncertainties in estimation of  erosion rates and the  incomplete status  of the  USFS
characterization of the St. Patrick Mine ball mill tailings, the assessment of mercury loading from this area should be
judged to be only a rough, order of magnitude estimate. The  estimate suggests, however, that this source plays a
significant  role  in mercury loading to Pena Blanca  Lake. Given the  assumptions used to  estimate  loads,
approximately 69 percent of the watershed mercury load to Pena Blanca appears to originate from the tailings pile
and  contaminated downstream sediments. This large percentage is a result of the high average concentration
reported for the tailings (287,000 ppb) relative to the average mercury concentration in sediments in the remainder
of the watershed (48 ppb).


Direct Atmospheric Deposition to Lake
The  direct  deposition of mercury from the atmosphere onto the lake surfaces was calculated by multiplying the
estimated atmospheric  deposition rates times the lake  surface area. Although Patagonia Lake has a higher total
annual  mercury load,  the  load per volume  of inflow is much lower than  those  in the two  impaired lakes.
Atmospheric deposition directly to the lake surface does not appear to be a major source of total mercury  load, as it
is estimated to account for only about 1 percent of the total annual load to the lakes. Atmospheric deposition to the
watershed could, however, constitute a significant portion of the net loading from the watershed.


Lake Hydrologic Model
No monitoring data for inflow, water stage, or outflow are available for Arivaca Lake or Pena Blanca Lake. The lake
levels are  not actively managed, and releases occur only when storage  capacity  is exceeded.  Therefore, lake
hydrology was represented by a simple monthly water balance,  using the following assumptions:


    •    Inflow from the watershed is given by monthly predictions from the GWLF model application.

    •    Direct precipitation on the lake surface is estimated from local observed monthly precipitation depth times
         the lake surface area at the beginning of the month.

    •    Evaporation from the lake surface is estimated from pan evaporation data and a pan coefficient of 0.7. This
         estimate  represents the ratio between mean annual  lake surface evaporation and average annual evaporation
         from Class A evaporation pans for this area of southern Arizona, and is within the range recommended by
         Dunne and Leopold (1978).

    •    Net gain from or loss  to groundwater  seepage  through the lake bed is assumed  to be zero, lacking any
         evidence to the contrary.

    •    Potential storage at the end of the month is calculated as the sum of initial storage plus inflow plus direct
         precipitation minus evaporation.

    •    The stage-area-discharge curve is used to estimate  the surface area and elevation of the lake surface
         corresponding to the potential storage at the end of the month. If the lake surface elevation is computed to
         be higher than the spillway elevation, the excess volume is assumed to spill downstream.

    •    Actual storage at the end of the month is the smaller of potential storage and full-pool storage.
                                                    68

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        Surface area and elevation of the lake surface at the end of the month are updated to reflect actual storage.
Lake Mercury Cycling and Bioaccumulation Model
Cycling and bioaccumulation of mercury within the lake was simulated using the Dynamic Mercury Cycling Model
(D-MCM; Tetra Tech 1999). D-MCM is a Windows 95/NT™-based simulation model that predicts the cycling and
fate of the major forms of mercury in lakes, including methylmercury, Hg(II), and elemental mercury. D-MCM is a
time-dependent mechanistic model, designed to consider the most important  physical,  chemical and biological
factors affecting fish mercury concentrations in lakes.  It can be used to develop and test hypotheses, scope field
studies, improve understanding of cause and effect relationships,  predict responses to changes  in loading, and
support design and evaluation of mitigation options.

The  major processes in D-MCM  include inflows  and outflows (surface and groundwater), adsorption/desorption,
paniculate settling, resuspension and burial, atmospheric deposition, air/water gaseous exchange, industrial mercury
sources,  in-situ transformations  (e.g.,  methylation, demethylation,  MeHg photodegradation, Hg(II) reduction),
mercury kinetics in plankton, and bioenergetics related to methylmercury fluxes in fish.

Model compartments include the  water column, sediments, and a food web that includes three fish populations.
Mercury concentrations in the atmosphere are input as boundary conditions to calculate fluxes across the air/water
interface (gaseous  exchange,  wet  deposition,  dry deposition).  Similarly,  watershed loadings   of Hg(II)  and
methylmercury are input directly as time-series  data.  The  user  provides for hydrologic inputs (surface  and
groundwater flowrates) and associated mercury concentrations,  which are combined to determine the watershed
mercury loads.

The food web consists of six trophic levels—phytoplankton, zooplankton, benthos, nonpiscivorous fish, omnivorous
fish, and piscivorous fish. Fish mercury concentrations tend to increase with age, and thus are followed in each year
class. Bioenergetics equations for individual fish (Hewitt and Johnson 1992) have been adapted to simulate year
classes and entire populations.

Input parameters for conducting the simulations for all three lakes in this study can be broadly separated into five
categories:


    •   Hydrologic dynamics and lake physical characteristics (morphometry, stratification)

    •   External loading rates of Hg (atmospheric, nonpoint source, and point source)

    •   Thermodynamic and kinetic rate constants

    •   Water, and sediment chemistry

    •   Biotic data
Model Evaluation

Sensitivity Analysis on Hotspot Sediment Load Multipliers
Watershed mercury loading from the known mercury hot spots (Ruby Dump and the St. Patrick mine ball mill site)
was calculated separately from the general sediment-associated watershed mercury loading, as discussed previously.
For both hot spots, sediment load per hectare from the hot spot is assumed to be four times greater than that for
normal rangeland. For the Ruby Dump site, this multiplier is intended to reflect the lack of vegetation at the site; for
the ball mill site, it reflects the fine consistency of tailings. This sediment load multiplier factor may be thought of in
terms of the USLE equation (RE*K*LS*C*P), which predicts sediment loss. The K factor for rangeland in the
watershed was set to 0.08, based on data in the STATSGO soil coverage. This K factor represents a sandy soil. The
consistency of the mine tailings, however, has been compared to that of talcum powder. A typical K factor for very
                                                   69

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fine sand with low organic content is 0.42, which is 5.2 times the K factor for rangeland soil (and would therefore
increase sediment loading estimates by 5.2 times). This factor is compensated somewhat by the fact that sediment at
the ball mill site is likely to be a mixture of native sandy soil and the finer tailings, and by lower slopes at the ball
mill site  than the average for rangeland soils in the  watershed  (because the site is located at the bottom of the
canyon).

For both sites, a simple sensitivity analysis was carried out on the sediment load multiplier to estimate its effect on
overall load estimates.  In the  case of the Ruby Dump  site, doubling the load multiplier has very little effect on the
overall estimated load (Table 6-3). The sediment load multiplier  is a more important parameter in the Pena Blanca
watershed (Table 6-4), however, because the ball mill site appears to be the dominant contributor of mercury loading
to the lake.


Table  6-3.  Sensitivity Analysis on the Ruby Dump Sediment Load Multiplier	
                Sediment Load Multiplier                          Percent of Load Attributed to Ruby Dump

                          1                                                    0.1%

                          2                                                    0.2%

                          4                                                    0.4%

                          8                                                    0.7%
Table 6-4.  Sensitivity Analysis on the Ball Mill Site Sediment Load Multiplier	
                Sediment Load Multiplier                   Percent of Load Attributed to St. Patrick Ball Mill Tailings

                          2                                                    54.7%

                          4                                                    70.7%

                          8                                                    82.8%
Mercury Cycling Model
As  stated previously, it was necessary to focus the modeling efforts, applying the  most sophisticated modeling
approaches to the processes that seem most important in driving fish mercury concentrations (i.e., cycling and
accumulation  of mercury  within the  lake). Therefore, though  other modeling  components  (e.g.,  the  GWLF
watershed  model) remained uncalibrated, more effort was expended  on the D-MCM  component,  including
examining known areas of scientific uncertainty in the model, modifying the model to better represent the lakes in
this study, and calibrating the model to the three lakes used in the cross-sectional approach.


Scientific Knowledge Gaps in D-MCM
The current version of D-MCM has updated mercury kinetics and an enhanced bioenergetics treatment of the food
web. The predictive capability of D-MCM is evolving but is currently limited by some scientific knowledge gaps,
including:


    •   The true rates and governing factors for methylation and Hg(II) reduction

    •   Factors governing methylmercury uptake at the base of the food web

    •   The effects of anoxia and sulfur cycling
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For example, there is evidence that anoxia and sulfides can affect mercury cycling and influence water column
mercury  concentrations in lakes (e.g., Benoit et al.  1999, Gilmour et al.  1998, Watras et al 1995, Driscoll et al.
1994), but the underlying mechanisms and controlling factors have not been quantified.

Another  important assumption in the current version of D-MCM is that all of the Hg(II) on particles is readily
exchangeable. This results in longer predicted response times for lakes to adjust to changing conditions or mercury
loads than likely would occur. It is quite plausible that a significant fraction of Hg(II) on particles is strongly bound,
reducing the amount of Hg(II) available for mercury cycling and the time required for fish mercury concentrations to
adjust to changes in mercury loadings.  The magnitude of this error potentially can be quite large for oligotrophic
lakes with very  low sedimentation rates and very long paniculate mercury residence times in the surficial sediments.
For systems that have very high sedimentation rates such as many reservoirs, the practical consequence of this
assumption could be small.


Modifying D-MCM for this Modeling Application
Because  strong  anoxia in the hypolimnion is a prominent feature during summer stratification for the Arizona lakes
simulated in this study, D-MCM was modified to  explicitly  allow significant  methylation to occur  in the
hypolimnion. In previous applications of D-MCM, the occurrence of methylation has been restricted to primarily
within surficial  sediments. That the locus of methylation likely includes or is even largely within the hypolimnion
(at least for Arivaca and  Pena Blanca  lakes)  is supported by (1)  the  detection of  significant, very high
methylmercury  concentrations in the hypolimnia of Arivaca and Pena Blanca lakes and (2)  almost complete losses
of sulfate in Arivaca Lake in the hypolimnion resulting from sulfate reduction. An input was added to the model to
specify the rate  constant for hypolimnetic methylation, distinct from sediment methylation.


Calibration of D-MCM
D-MCM was calibrated to the three study lakes by compiling and inputting data specific to each lake on:


    •   Hydrology and lake physical characteristics (morphometry, stratification)

    •   External loading rates of mercury (from the atmosphere, watershed, and Ruby Dump)

    •   Thermodynamic and kinetic rate constants

    •   Water  and sediment chemistry

    •   Biotic  data


Data specific to each of the three lakes were input into the model first, followed by data derived from calibrations
for other lakes  where  site-specific  data were  lacking  for  Arivaca  and  Pena Blanca lakes.  For instance,
thermodynamic and kinetic rate constants  specific to the lakes are not available and were obtained from previous
calibrations of D-MCM to lakes in other regions.

Calibration proceeded by running the model  with a daily timestep for 10 years and  adjusting the model so that
concentrations of mercury in largemouth bass matched observed averages for each lake.  Because the hydrology of
these lakes is so dynamic and "flashy," more weight was placed on matching largemouth bass Hg concentrations
than on trying  to match predicted and observed water chemistry data precisely. This decision was based on the
following:


    •   Limited water chemistry data that indicate that chemistry in these systems varies rapidly.

    •   Hydrologic budgets that show that the hydraulic residence time of all three lakes  is relatively short (less
        than 0.4 year).
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    •   The lack of truly local atmospheric loading data adequate for resolving and validating short-term dynamics
        in any of the lakes.

    •   The fact that mercury concentrations in older cohorts of largemouth bass reflect dietary intake throughout
        their life history and are rather insensitive to short-term variations in water column chemistry and Hg
        loading dynamics.


The calibrations used the same kinetic (rate constant) assumptions for all three lakes letting only differences in
loading, hydrology, and chemistry dictate differences in response. The following paragraphs give a brief overview
of how the input data were assembled and input to the model.

Calibration of the model assumed that there were no good a priori reasons to use differing rate or thermodynamic
constants for each lake to account for differing mercury behavior. Initial application to Arivaca and Pena Blanca
resulted in large overestimates of the amount of mercury predicted in fish. The particle-Hg(II) partition coefficients
were adjusted for particles in the sediment and water column to yield stronger paniculate binding, thus reducing the
dissolved pool available for methylation. Higher partition coefficients are appropriate for the epilimnion because the
hypolimnion becomes seasonally anoxic, which can reduce the ability of inorganic particles to sorb trace elements.
To  further improve the model calibration,  focus was  placed on one feature of the model known to be potentially
inadequate—the ability  of the model to predict the amount of labile Hg  truly  available  for desorption. Previous
simulations with D-MCM have illustrated that, although initial sorption of Hg to particles may be well characterized
by conventional sorption models such as the Freundlich and Langmuir isotherms, desorption of "aged" Hg bound to
particles may not follow the same models.  In others, some Hg may become irreversibly bound after adsorption has
initially occurred, and the amount of mercury ultimately available  for desorption is less than the initial  sorption
models  would predict. The final model calibration assumed that watershed background mercury loads were 62
percent  available for desorption, while  loads derived from ball mill tailings at Pena Blanca Lake and from Ruby
Dump at Arivaca Lake were wholly available. This  approach yielded a good  match to  observations of mercury
concentrations in water and in fish (Table 6-5).

A comparison of model-predicted internal fluxes in the three lakes shows that the key difference between Patagonia
versus Pena Blanca and Arivaca lakes is the rate of hypolimnetic methylation of mercury.


Table  6-5.  D-MCM Calibration for Pena Blanca, Arivaca, and Patagonia Lakes	
                                                                                    5-year Bass Hg (mg/kg
    Lake         Parameter Type          Methyl Hg (ng/L)          Hg(ll)totai (ng/L)                wet)
Pena Blanca
Arivaca
Patagonia
Observed
Predicted
Observed
Predicted
Observed
Predicted
3.92
0.00-4.26
14.3
0.00-12.07
0.78
0.00-0.12
11.38
0.00-17.69
1.46-8.3
0.00-6.28
1.14
0.00-11.38
1.42
1.40
1.18
1.18
0.14
0.05
Model Application
The application of the linkage models provides an estimate of the loading capacity of the two lakes, or the rate of
external mercury loading consistent with achieving the numeric targets. The  TMDL represents the sum of all
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individual allocations of portions of the  waterbody's loading capacity. Allocations  are  made to point sources
(wasteload allocations)  and  nonpoint sources  or natural background  (load allocations). In many cases,  it is
appropriate to hold in reserve a portion of the loading capacity to provide a MOS, as provided for in the TMDL
regulation.

After calibration, the model was  used to identify the  loading capacity and load reductions necessary to meet the
numeric target in 5-year-old largemouth bass. The response of mercury in 5-year-old largemouth bass to changes in
external loads is nearly linear for these lakes (after a period of several years' adjustment). This is because sediment
burial rates are high and sediment recycling is low, with the majority of the methyl mercury that enters the food
chain being created in  the anoxic portion of the water column. The numeric target of 1 mg/kg  in 5-year-old
largemouth bass is predicted to be met with a 37 percent reduction in total watershed mercury loads to Pena Blanca
Lake and a 16 percent reduction in total watershed mercury loads to Arivaca Lake.

Because there are  no permitted point sources in the watersheds, there are no wasteload allocations in the TMDL.
Load allocations represent assignment of a portion of the TMDL to nonpoint sources.

The current knowledge  of mercury sources in the watershed  and transport to the lake requires use of a "gross
allotment" approach to the watershed as a whole, rather than assigning individual load  allocations to specific tracts
or land areas within the  watershed. Loading from geologic sources also has not been separated from the net effects
of atmospheric deposition onto  the  watershed.  Information is currently  available  to separate sources for load
allocations into  three components: (1) direct atmospheric  deposition onto the lake surface, (2)  loading  from
watershed hotspots, and  (3) generalized background watershed loading, including mercury derived from parent rock
and  soil material,  small amounts of residual mercury from past mining operations, and  the  net contribution of
atmospheric deposition onto the watershed land surface.

The allocations  are summarized  in  Table 6-6.  It is  assumed that the direct atmospheric deposition load was
essentially uncontrollable at these lakes and is therefore not reduced. For Pena Blanca,  loading  attributed to the St.
Patrick Mine hotspot is  considerable and is already proposed to be addressed by  a removal action; therefore, load
reductions are focused on that site. For Arivaca, watershed background is most important, and load reductions must
be achieved there. The  allocations are developed as annual average  loads  and address fish tissue concentrations
associated with bioaccumulation of mercury. Because methyl mercury accumulates in tissue, concentrations in tissue
of fish integrate exposure over a number of years; therefore,  annual mercury loading is  more important for the
attainment of uses than daily loads.

Table 6-6.  TMDL Allocations for Pena Blanca and Arivaca  Lakes
                                    Pena Blanca Lake
                                                                                Arivaca Lake
Allocations
Atmospheric Deposition
Hotspot Loads
Watershed Background
Total
Unallocated
Loading Capacity
(g-Hg/yr)
2.3
18.6
58.6
79.5
65.2
144.7
(g-Hg/yr)
2.3
133.0
58.6
193.9
—
—
Reduction
0.0
114.4
0.0
114.4
—
—
(g-Hg/yr)
4.2
0.7
111.2
116.1
38.7
154.8
(g-Hg/yr)
4.2
0.7
178.9
183.8
—
—
Reduction
0.0
0.0
67.7
67.7
—
—
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Development of a Nutrient TMDL in the Cahaba River, Alabama

Background and Problem Identification

Watershed Characteristics
The  Cahaba River watershed (HUC  03150202) in central Alabama encompasses  much of the  Birmingham
metropolitan area (Figure 6-1). The Cahaba River, a tributary of the Alabama River, has three segments listed for
impairment by nutrients on the Alabama Department of Environmental Management (ADEM) 2002 §303(d) list.
Historically, nutrient impacts have been documented as nuisance blooms and persistent growth of periphyton. The
purpose of the  modeling effort by Tetra Tech  was to  evaluate in-stream nutrient dynamics and predict  the
effectiveness of source reductions based on allocations to point and nonpoint sources of TP.  This modeling case
study describes: (1) nutrient  TMDL numeric  criteria development and interpretation (35 ug/L growing-season
median at specific points), (2) watershed and receiving model design and application, and (3) interpretation of
modeling results to determine TMDL load allocations.  The Cahaba River Nutrient TMDLs were proposed as a
cooperative effort between ADEM and EPA Region 4 (ADEM 2004b).


Listing Information
ADEM listed one of the segments for nutrient impairment in 1996, but the remaining two  segments  listed for
nutrients were added to ADEM's 1998 303(d) list by EPA Region 4, based on consultation with the U.S. Fish and
Wildlife Service (USFWS) regarding combined  nutrient and siltation impacts to overall habitat  degradation.
USFWS, in addition to  other agencies such as EPA Region 4, ADEM, and the Geological Survey  of Alabama,
attributed excessive periphyton growth in the Cahaba River as the cause of associated impacts to the aquatic life use,
including impacts to threatened and endangered species of mussels, fishes, and snails.
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                                                                   Cahaba  River Basin
                                                                   303(d) Listed Cahaba River
                                                            /\/ Streams
                                                                   Incorporated Areas
Figure 6-1. Location of Upper Cahaba River watershed, Alabama.
Water Quality Standards and TMDL Targets
The state of Alabama has narrative rather than numeric criteria for nutrients, which this requires determination of a
numeric target prior to determining TMDLs. In other words, allowable pollutant loads must be determined to meet
numeric TMDL target(s) established by interpretation of the narrative criteria. Early in TMDL development for the
Cahaba River, EPA Region 4 and ADEM undertook a cooperative effort to determine appropriate nutrient targets to
protect the aquatic life designated use as well as threatened and endangered species viability.  These efforts included
literature reviews,  consultation with national experts,  and  an  ecoregion-based  reference-stream evaluation  of
ambient total phosphorus.

After evaluating periphyton growth-limiting  nutrient thresholds  in the literature, ADEM decided  to focus on
determining ambient water-column total phosphorus concentrations during the growing season that would limit
periphyton growth and preserve habitat viability.  ADEM decided to use an ecoregion reference-stream approach to
determine the appropriate TP target. The ecoregion reference approach is recommended by EPA (USEPA 2000) in
the absence of sufficient data to support a strictly effects-based target.  In a reference-stream approach, ambient
nutrient levels in comparable least-affected streams are evaluated to determine ambient nutrient levels that protect
aquatic habitat and that prevent excessive periphyton growth.

The 303(d)-listed portion of the  Cahaba River system is in the southeast portion of the Ridge and Valley province
(Ecoregion 67), as shown in Figure 6-2.  Six sites located on "least-impacted" reference streams were assessed for a
few years of monthly ambient water-column nutrient data. ADEM previously established the reference reaches and
their associated watersheds using various methods  to characterize their condition and determine if they were good
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candidates.  Such methods include watershed surveys, land use coverage, inventorying point and nonpoint sources,
conducting field  reconnaissance, and ultimately collecting chemical, physical and biological data to ensure their
condition and verify the streams are of high quality and fully meet designated uses.  A summary of nutrient data at
these sites is listed in Table 6-7.
                                                                             S  Ecoregion 67 Reference Sites
                                                                            A/303(d) Listed Segments
                                                                            Level III Ecoregions
                                                                                Piedmont (45)
                                                                                Southeastern Plains (65)
                                                                                Ridge and Valley (67)
                                                                                Southwestern Appalachians (68)
                                                                                Interior Plateau (71)
                                                                                Southeastern Coastal Plain (75)
Figure 6-2. Locations of sites utilized for ecoregion reference-stream analysis.
Table 6-7. Summary of Median Nutrient Concentrations for April-October at the ADEM Reference Stations in Ecoregion 67
Station
DRYC-2
DRYT-9
FRMB-8
HNMB-4
MAYB-1
TCT-5
Samples
7
6
13
11
20
13
11-digitHUC
03150106240
03150106330
03150202090
03160111070
03150202080
03150106330
Median TP
(ug/L)
24
32
26
28
21
19
Median TN
(ug/L)
295
203
228
273
173
167
Stream Name
Dry Cr (Calhoun Co.)
Dry Cr (Talladega Co.)
Fourmile Cr (Bibb Co.)
Hendrick Mill Branch
Mayberry Cr
Talladega Cr
Basin
Coosa
Coosa
Cahaba
Black Warrior
Cahaba
Coosa
                                                        76

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The nutrient target was determined to be the 75th percentile TP of all data collected at these sites within the growing
season (April-October).  This target was calculated to be 35-ug/L median TP during the growing season (ADEM
2004a).
Source Assessment
Nutrient loading causing excessive periphyton growth was found to be a result of both point sources and urban
nonpoint source runoff from municipal separate storm sewer systems (MS4s). The drainage area contributing to the
105 river miles of 303(d)-listed segments in the upper Cahaba River is approximately 1,027 square miles, including
a dozen NPDES-permitted municipal wastewater treatment plants  (WWTPs)  with discharges greater than 1.0
million  gallons per day (MOD), as shown in Figure 6-3.  In the study period 1999-2001, these WWTPs operated
advanced secondary treatment processes with little or no implementation of nutrient removal.  In drought periods,
wastewater can comprise up to 60 percent of the total  streamflow  at certain locations, exacerbating eutrophic
conditions in critical periods. Natural streamflow in the river is further modified in low-flow periods by a reservoir
on a tributary, the Little Cahaba River, and a major (~80 MOD) drinking water withdrawal in the mainstem river.
Available data for the TMDL included biweekly nutrient samples collected by local municipalities for three years at
various locations, in addition to a few USGS streamflow gages and ADEM long-term trend data.
                             	
         Major WWTPs
         Minor WWTPs
         Water Supply Intake
         County Boundaries
         ' US Hwy 280
         ' 303(d)-Listed Cahaba River
         Lake Purdy
         ' Streams
         Cahaba River Basin
         Incorporated Areas
[
                                                     BIRMINGHAM RIVERVIEW WWTP CWRS
                                                    HOOVER (INVERNESS) WWTP|
           HOOVER RIVERCHASE WWTP
                                                                 20 Miles
Figure 6-3. Locations of major (>1.0 MGD) NPDES-permitted point source discharges in the Upper Cahaba River
watershed

Data analysis to support the water quality modeling effort, specifically prediction of in-stream TP concentrations,
required compilation of extensive NPDES discharge monitoring reports (DMRs) for the major (>1.0 MGD) WWTPs
and estimated discharge and nutrient loading for the minor WWTPs.
                                                  77

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Nonpoint Source Data Analysis
Nonpoint source  TP  loads to the Cahaba River were  determined by evaluation of in-stream  data  collected  at
locations not influenced by point sources.  These nonpoint source evaluation sites and contributing watershed areas
are shown in the land use map in Figure 6-4.

Characteristic nonpoint source TP concentrations for each land use category were derived by the simple correlation
of median TP with MRLC land use classification (urban, forest, and other).  Descriptions of each site are listed  in
Table 6-8.
                                                       O  Nonpoint Source Calibration Stations
                                                          303(d) Listed Cahaba River
                                                      .•'-.'•'NHD Streams
                                                      |  ~\ NFS Calibration Subbasins
                                                      j	' Cahaba Watershed
                                                      MRLC Landuse (C03160202!
                                                      ^^^ Urban
                                                          Barren or Mining
                                                          Transitional
                                                          Cropland or Grasses
                                                          Pasture or Grasses
                                                          Forest
                                                          Upland Shrub Land
                                                          Grass Land
                                                          Water
                                                          Wetlands
                                                             16 Miles
Figure 6-4. Water quality sampling sites used to assess nonpoint source concentrations of TP and other nutrients.
Table 6-8. Sites Within the Cahaba River Watershed Not Impacted by Point Sources
Station ID
CR1IS
SC1IS
SC2IS
SC3IS
SC4IS
ST2
ST3
ST4
Location
Cahaba River at Hwy 11 Civitan Park — Trussville
Shades Cr at Elder St near Eastwood Mall in Birmingham
Shades Cr at Columbiana Rd — Lakeshore Drive Junction
Shades Cr at Hwy 150 Galleria area — Hoover
Shades Cr at Dickey Springs Rd (02423630) nr Greenwood
Little Shades Creek above Cahaba River
Patton Creek above Cahaba River
Patton Creek at Patton Church Rd.
Percent
Forest
82
67
57
67
71
56
55
47
Percent
Other
14
11
10
9
12
9
9
8
Percent
Urban
3.7
21.5
32.9
24.5
16.6
34.5
35.5
44.3
Median TP
(ug/L)
50
70
70
66
75
160
130
145
                                                       78

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The correlations  of TP/percent urban and TP/(urban, forest,  other) are  shown  in  Figure  6-5.   Estimated
concentrations for 100 percent urban land use  (-285 ug/L  TP) determined by this correlation corresponded very
closely with evaluated MS4/stormwater data (Pitt et al, 2004). Further validation of general application of this
correlation is that estimated forest concentrations (zero percent  urban area) are virtually identical to evaluated
medians  of reference stream (least-impacted watershed) data at ~25  ug/L TP  (ADEM 2004a).   Based on the
correlation, nonpoint source concentrations of TP could be empirically applied to tributary streamflows based on
each tributary watershed's land use composition of urban, forest, and other land use percent areas.
_J
"3)
a
Q.
1-
180 -i

140. -
190. -
mn
pn
fin -
do -
on
o
• Median TP
	 Linear (Median TP) ^
•
+^S^
y = 258.25X + 26.847 ^^^^
R2 = 0.615^^^^
^^ \
^+ +
* ^^ \


0% 10% 20% 30% 40% 50%
Percent Urban Area (MRLC)
Figure 6-5. Nonpoint source concentrations of TP as a function of percent urban area.

Based on the correlation, it was possible to make  the estimates of "existing" TP concentrations by land use as
follows:  Urban, 285 ug/L; Forest, 25 ug/L; Other, 60 ug/L.  (The "Other" category was assumed to be between
Urban and Forest, and the best fit was chosen; the value chosen for "Other" had minimal effect on overall results).

Although it was important to  evaluate nonpoint  source tributary concentrations of TP,  it was  obvious  from
assessment of in-stream data that sources of TP were dominated by municipal point sources,  because high TP
measurements, often in excess of 1 mg/L, corresponded to drought periods of low streamflow and virtually no urban
stormwater runoff.  At the time the point and nonpoint source water quality data compilation was complete, it
became  apparent that simple mixing of high-TP point source effluent with low-TP streamflow was the dominant
process  controlling concentrations of TP in critical locations  of the river immediately upstream of reaches where
periphyton growth was  of greatest concern.
Model Selection
The modeling system applied to evaluate nutrient TMDLs for the Cahaba River system includes: (1) the LSPC,
which is an enhanced watershed model based on HSPF algorithms (Bicknell et al. 1996) and including a Windows-
based GIS interface; (2) EPDRIV1, a one-dimensional unsteady-flow hydrodynamic model based on CE-QUAL-
RIV1; and (3) a custom-developed Spreadsheet Model which combines results from both simulation models to
interpret scenarios for management options.  Load  allocations and wasteload allocations necessary to meet the
nutrient target were determined using the Spreadsheet Model, so that the target would be met as a growing season
median at three critical locations.

At the beginning of the effort to model pollutant dynamics in the Cahaba River, because  no single model could be
expected to adequately predict hydrology  and nutrient fate and transport in such  a  complex system, it was
determined that at least two models would be required—a watershed  model to  simulate hydrologic response (i.e.
                                                   79

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runoff as a function of precipitation, geomorphology, and land use) and a receiving water model that would account
for both hydrodynamic transport and water quality kinetics (i.e., eutrophication).

Development of a comprehensive modeling system to assess the Cahaba system required consideration of urban and
rural  hydrology, in addition to nutrient fate  and transport in the  mainstem river.  LSPC was selected  as the
hydrologic model for tributaries and the overall watershed, and EPDRIV1 was chosen to assess the mainstem river
receiving water (hydrodynamic transport and  water quality).  Design of the system was such that tributary and
subbasin hydrology was determined by using the LSPC model based on precipitation records, geomorphology, and
land use classification.  Although LSPC features the capability to predict water quality constituent concentrations in
runoff, nutrient concentrations from runoff and tributaries were determined instead by empirical estimates described
in the evaluation of nonpoint sources above.

Overall, the  watershed  and receiving water models accurately represented nutrient dynamics in the Cahaba River,
but it was necessary to simplify the issue in order to evaluate existing conditions and propose TMDL allocations.
To combine the dynamic  elements of watershed hydrology, urban nonpoint source  and background phosphorus
loading, and predict in-stream mixing and dilution of major point source inputs, a mass-balance spreadsheet model
("Cahaba Spreadsheet Model") was created with Microsoft  Excel, using and combining information from  USGS
streamflow gages, daily LSPC model-predicted hydrology, land use classification and associated TP concentrations,
river geometry, EPDRIV1  dynamically predicted stream velocity, and historical WWTP data from NPDES DMRs.
In this way, the Cahaba Spreadsheet Model is essentially a postprocessor for the dynamic model results for tributary
steamflow and transport, but also incorporates  empirical and raw data for upstream flow, tributary TP, point  source
flow and point source TP.
Model Setup

Watershed Hydrologic Model
Configuration of LSPC was supported with the Arc View application known as the Watershed  Characterization
System (which uses datasets specific to states within EPA Region 4) and the WCS-to-LSPC autoconfiguration tool,
which automatically delineates watershed subbasins guided by streamlined user input, overlays and tabulates land
use areas, and calculates reach lengths and slopes based on DEM and NHD data.

WCS was used to automatically delineate 300 subbasins within the watershed. Using the WCS-to-LSPC tool, land
use areas for each MRLC  classification were tabulated for each  subbasin and converted to  the LSPC database
format, which uses Microsoft Access.  A pictorial example of land use areas within subbasin boundaries for a few
headwaters subbasins is shown in Figure 6-6.

More than 300 subbasins were delineated, and each was assigned to one of a dozen  hourly and daily precipitation
stations featuring complete  records for three years (1999-2001).  Average  subbasin size for the LSPC watershed
model is approximately 3 mi2.  The model was run for a three-year period corresponding to available precipitation
data at all of the  sites, although some had to be patched with adjacent stations for short periods, and, in some cases,
daily rainfall was disaggregated to hourly totals.  Locations of the 12 precipitation stations are  illustrated in Figure
6-7.

LSPC model output for daily streamflow at 88 subbasins corresponding to  tributary subbasins were passed to the
EPDRIV1 mainstem hydrodynamic model.  Both  daily  streamflow  and monthly  median tributary flows  were
incorporated into the Cahaba Spreadsheet Model. An example of the LSPC model interface is shown in Figure 6-8.
                                                   80

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  I    I Headwaters above Trussville
  /\/ Streams
  Land Use Classification
     | Urban
  ^B Barren or Mining
       Transitional
       Crops or Grasses
       Agriculture - Pasture
  ^| Forest
       Upland Shrub Land
       Grass Land
  ^| Water
       Wetlands
Figure 6-6. MRLC land use aggregation calculated by LSPC subbasin delineation.
   |    | Theissen Polygons
     s  Weather Stations
   /\/ 303(d) Listed Segments
   /\/ Streams
   /\/ Lake Purdy
   |    I Cahaba River Basin
     CentrevilleWSMO
Figure 6-7. Precipitation sites with 3 years of hourly or daily data used in the LSPC watershed model.
                                                     81

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   15PC - [tkatftHutMenwit -
                                          »r  pa,
g*t*i
                                                        tj
                                                                         ..C '.x.
                                                                         .=_*..*.
                                      /                          w
                                                    if r~        ^r
                              J
                             J                          IX
                                                  r       v-
Figure 6-8. Example of LSPC GIS interface for selecting headwater subbasins.
Mainstem Hydrodynamic Model
In-stream hydraulics and transport in the mainstem Cahaba River were calculated using the EPDRIV1 model, the
Cahaba application of which was originally configured by Jefferson County Environmental Services Division in
conjunction with a SWMM  watershed model (now superseded by the LSPC watershed model).   For TMDL
development,  the EPDRIV1 model's extent was expanded upstream and downstream to encompass 303(d) listed
segments of the Cahaba River, using additional cross-section surveys from Federal Emergency Management Agency
(FEMA) flood studies for a total of 160 cross sections and 105 river miles. A minimum flow was instituted at times
of zero flow in the headwaters to allow the model to run.  Examples of model cross sections are shown in Figure
6-9.

Output tributary streamflow predictions from LSPC were linked to the EPDRIV1 input fileset at 88 cross-sections
via a custom  post-processing routine (LSPCRIV1) written in FORTRAN.  Due to hydraulic modification at the
drinking water withdrawal and  operation of  the Lake  Purdy reservoir, streamflow was corrected mid-river to
correspond with the USGS streamflow record at a nearby location, and calibrated at downstream locations based on
calculated hydrodynamic transport and additional LSPC-derived inflows.
                                                  82

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Figure 6-9. Examples of EPDRIV1 cross-sections derived from FEMA survey data.
Mass-Balance Spreadsheet Model
The Cahaba Spreadsheet Model estimates monthly median TP concentrations at 160 points along the Cahaba River
(corresponding to EPDRIV1 cross sections) from Trussville to Centreville, for each month in the study period 1999-
2001 and based on historical and projected point source loads, historical flows, and estimated nonpoint source loads.
The transport scheme was simplistic in nature, accounting for TP loss from the system by simple first-order decay
based on time of travel (cf.. SPARROW work of Smith et al. 1997).  The decay parameter was chosen to be 0.25
day"1 by best fit to measured in-stream data.

Inputs for the Cahaba Spreadsheet Model included the following combination of data sources:

    •   River geometry (segment length) from EPDRIV1 cross-section input

    •   USGS monthly median streamflow at Trussville  (upstream boundary) and Caldwell Mill (below US 280
        dam)

    •   Predicted monthly median streamflow at 88 tributary points from LSPC watershed model

    •   Estimated empirical nonpoint source nutrient concentrations based on percent urban land use for all 88
        tributary subwatersheds

    •   Reported and estimated monthly WWTP effluent discharge and nutrient concentrations from DMR reports,
        as available

    •   Predicted monthly median in-stream velocities from EPDRIV1 simulation output
                                                   83

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A schematic of the basic process of combining these data in the Cahaba Spreadsheet Model is shown in Figure 6-10.
  Geometry
  (160
  reach
  lengths)
     ll
     li
     u. a
Upstream Boundary - TP calculated by land use (%urban)
 —Inflow volume based on USGS Streamflow at Trussville
_  „	                (02423130)

   Tributary Inflows - TP calculated by land use (%urban)
   —Inflow volumes calculated by LSPC watershed model
-  •*	               for 88 subbasins

      Point source inflows - TP from average or DMRs
~  "*        —Inflow volumes from monthly DMRs


     Time of Travel - Computed from median monthly
                   RIV1 model velocity
   —Corrected to approximate volumetric residence time
~--TP "loss" approximated as first order exponential decay
Figure 6-10. Schematic of the functional relationship of data inputs in the Cahaba Spreadsheet Model.

Calculations of in-stream TP are performed on a monthly timestep, the smallest timestep on which point source
nutrient data are available.  Because the nutrient target was established as a growing-season median, the monthly
results from the Spreadsheet Model have been aggregated to examine in-stream TP concentrations for three years of
growing seasons.
Model Evaluation

Watershed and Mainstem Streamflow

Streamflow predictions from LSPC were calibrated to USGS Streamflow in multiple locations, including the upper
Cahaba River headwaters and tributaries such as Shades Creek.  An example of hydrologic predictions in a tributary
of the Cahaba River is shown in Figure 6-11.

Hydraulic transport results were calibrated in EPDRIV1 using friction factors and with particular attention to the
hydrologic discontinuity at  the US 280 dam, water withdrawal, and controlled discharge from Lake Purdy.
Ultimately, the EPDRIV1 model average velocities were evaluated to derive daily time of travel between cross-
sections, which was transferred to the Cahaba Spreadsheet Model.
                                               84

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         Daily Total Precipitation (Year 2001)
                                        -Year 2001 Observed Flow
   10000 -,
                                                                      Modeled Flow
                                                                             r 0
    1000 —  ^t=
  to
  LL.
  o,
  1
  D)
  O
100
                                                                   ^N   ^N
Figure 6-11. Example of hydrologic model calibration:  model and observed streamflow.
Spreadsheet Model: Mass Balance for Flow and Total Phosphorus
Mass balance for flow in the Cahaba Spreadsheet Model was established by combining flows from USGS daily
streamflow data at the upstream boundary and below the US280 dam, 88 watershed tributary daily inflows to the
mainstem, and 9 major and 22 minor point sources on a monthly basis. Monthly median combined flows, used
because long-term water quality analysis ultimately was performed monthly, compare favorably to USGS data, as
shown in Figure 6-12.
   10000.00,
                                                                           Median Flow
                                                                           Minimum
                                                                           Maximum
                                                                           USGS Min
                                                                           USGS Mean
         200.0
                                                                              100.0
                                                                                            80.0
Figure 6-12. Example of monthly streamflow predictions compared to USGS data at seven sites.
Mass balance for total phosphorus was calculated by mixing upstream cross-section TP concentrations with tributary
and point source TP concentrations (where applicable)  and their associated monthly median streamflow values.
Losses during downstream transport were estimated by a first-order exponential loss factor based on EPDRIV1 time
of travel.  An example of predicted longitudinal TP concentrations (in this case, monthly median concentrations) is
shown in Figure 6-13.  Data from grab samples from random times during a given month were not expected to
                                                   85

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precisely match the monthly median of daily model results, but the results are very similar and trends are identical
(primarily dominated by longitudinal locations of major point sources and tributaries).
                        Estimated Historical TP Concentrations from Trussville Downstream
     3500


     3000


     2500


     2000


     1500
  •=  1000
      500 -
Estimated TP
TP Data
Max TP
MinTP
        200.0
                       180.0
                                     160.0
                                                    140.0
                                                River Mile
                                                                  120.0
                                                                                 100.0
                                                                                                80.0
Figure 6-13.  Estimated monthly median TP concentrations in the Cahaba River in September 1999, from Trussville
(upstream at left) to Centreville (downstream at right). Gray lines indicate maximum and minimum monthly predicted TP
concentrations based on streamflow variation.
Model Application

Spatial Interpretation of Nutrient Target
Once the integrated results of the  Spreadsheet Model made it possible to evaluate long-term (growing-season) TP
conditions to compare to the ecoregion reference stream target of 35 ug/L TP, it was still necessary to determine the
spatial applicability of the target.  ADEM determined that evaluating TP concentrations at three sites (rather than
every reach of the river) would be sufficient to prevent periphyton growth at levels that would potentially affect
aquatic life uses.  These sites were determined to be upstream of critical sites where periphyton had been confirmed
to be a major problem. At the critical sites, it was apparent that the greatest periphyton growth effects observed had
been due to not only historically high TP levels but also geomorphological conditions: wider and shallower reaches,
more sun exposure, and higher availability of substrate.  Based on these observations, the spreadsheet model was
used to evaluate growing-season TP conditions at three sites upstream of critical periphyton reaches.  The selection
of three sites also simplifies ADEM's future workload of follow-up monitoring for comparison of in-stream ambient
conditions to the TMDL target. The three  sites selected for TMDL evaluation are illustrated in Figure 6-14.
                                                     86

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   A/
Instream Compliance Points
Water Supply Intake
NPDES Municipal Point Sources
NPDES Small Point Sources
US Hwy 280
Lake Purdy
303(d)-Listed Cahaba River
Streams
County Boundaries
Cahaba River Basin
             JEFFERSON CO

    Old Montgomery HwyJ/
 ~\| Shelby Co. Hwy 52
Figure 6-14. Cahaba River nutrient TMDL evaluation points upstream of critical reaches.
TMDL Results: Determining Wasteload Allocations and Load Allocations
Based on the three critical years (1999-2001), the TMDLs were determined as the necessary load allocations and
wasteload allocations to achieve the growing-season median water quality target of 35 ug/L (April-October) at the
three designated critical locations along the river.  Point source TP concentrations at maximum permitted flow were
reduced such that the target was not exceeded at the three evaluation sites for the average of the three (1999-2001)
growing-season median values.  In addition, nonpoint source concentrations were reduced from urban land areas by
65 percent in the final scenario. A longitudinal perspective of growing-season median TP concentrations, the final
TMDL scenario is shown in Figure B-15.

ADEM and EPA determined the Cahaba River Nutrient TMDLs to be achieved in three phases of implementation
over 15 years.  Wasteload Allocations and Load Allocations necessary to meet the three phases of the TMDL are
shown in Table 6-9.
                                                   87

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     200
                 Growing Season Median TP (1999-2001) fromTrussville Downstream
                                                             • •  • TP Target
                                                             ^^^^Growing Season Median
                                                                   1999 Growing Season Median
                                                                   2000 Growing Season Median
                                                                   2001 Growing Season Median
180
160
   140
River Mile
120
100
80
Figure 6-15. TMDL scenario, growing-season median TP for 1999-2001 and three=year average
Table 6-9.  TMDL Summary for Cahaba River Phased TP Reductions
Reduction
Phase
Phase 1
(Initial
Reductions
2005-2010)

Phase 2
(Intermediate
Reductions
2010-2015)

Phase 3
Final Reductions
(2015-2020)

Growing Season
(April-October)
Wasteload
Concentration (ug/L
TP)
400 major WWTPs
(21.0MGD design)/
2000 minor WWTPs1
(<1.0MGD design)2
200 major WWTPs
(21.0MGD design)/
500 minor WWTPs
(<1.0MGD design)1
43 major WWTPs
(51.0 MGD design)/
300 minor WWTPs
(<1.0 MGD design)1
Nonpoint Source Load
Allocation and MS4
Wasteload Allocation by
MRLC Land Use
Classification (ug/L TP)
285 urban/MS4
25 forest
60 other

214 urban/MS4
25 forest
60 other

100 urban/ MS4
25 forest
60 other

Continuous Point LA and MS4 WLA
Source Percent Percent Reduction by
Reduction from MRLC Land Use
1999-2001 loads Classification
36% 0% urban/MS4
0% forest
0% other

62% 25% urban/MS4
0% forest
0% other

81% 65% urban / MS4
0% forest
0% other

 Minor WWTPs with a current permit limit less than that proposed will keep their current limit.
2Margaret WWTP (0.5 MGD), due to its headwaters location, is required to meet the following: Phase 1-1000 ug/L; Phase 2-250
ug/L; Phase 3-150 ug/L

MS4 and urban nonpoint source loads (considered identically as land use-based sources in  this analysis) were
determined by the empirical method using percent urban, forest, and other land uses described above. Urban loads
were derived from empirical data and fraction of USGS MRLC land use classification designated as urban types
(high-intensity residential, low-intensity residential, and high-intensity commercial/industrial/transportation).  MS4
loads included in the WLA are defined as urban area loads within designated NPDES MS4 boundaries, but urban
area loads outside of MS4 areas are defined as part of the LA, in order to be consistent with EPA guidelines.  No

-------
reductions are required from forested areas or "other" land use classifications. Reductions in loading from MS4 and
urban areas are required beginning in Phase 2 because marginal benefits of such reductions would be negligible in
Phase 1.  Continuous point sources (WWTPs) dominate in the low-flow summer period; therefore, only WWTPs are
required to make a reduction in Phase  1.

Table 6-10  shows existing and predicted  in-stream growing  season  (April-October) median total phosphorus
concentrations for the three phases of implementation at the three critical evaluation points on the Cahaba River.
Table 6-10. Existing and Predicted Instream Growing Season Median TP in the Cahaba River
Evaluation Site
Cahaba River at Roper Rd.
Cahaba River at Old
Montgomery Hwy
Cahaba River at Shelby Co.
Hwy 52
Existing Condition
(1999-2001)
1999-2000 Instream
Growing Season
Median Conditions1
(ug/L TP)
1,140'
895
560
Phase 1 (Initial
Reductions 2005-2009)
Predicted Instream
Growing Season
Median Conditions1
(ug/L TP)
124
247
156
Phase 2
(Intermediate
Reductions 201 0-201 4)
Predicted Instream
Growing Season
Median Conditions1
(ug/L TP)
67
126
82
Phase 3 (Final
Reductions 2005-2010)
Predicted Instream
Growing Season
Median Conditions1
(ug/L TP)
31
35
25
 Instream conditions are evaluated as median value of growing season April-October.
2Downstream of Trussville site existing conditions shown due to lack of data at Roper Rd.
The  Cahaba Spreadsheet Model,  using  and simplifying results from the dynamic watershed model LSPC and
mainstem river model EPDRIV1, has proven extremely useful as a management tool to judge at a screening level the
results of proposed management actions (i.e.,  NPDES  point source wasteload allocations for nutrient TMDLs).
Although the watershed system exhibits extremely dynamic hydrology and water quality conditions, at the high
concentrations of TP caused by primarily WWTP effluent in low-flow critical conditions,  consideration of the
dominant process of mixing and dilution has proven sufficient to evaluate the system for management alternatives,
namely a 3-tier phased implementation schedule of nutrient TMDLs (ADEM 2004b).  Furthermore, the system of
linking models  together to take advantage of the strengths of each can be  extended  in a modular fashion. For
example, output of LSPC and EPDRIV1  has been used to drive an experimental application of WASP6 simulating
periphyton conditions in the  Cahaba River, and the water quality module of EPDRIV1 can be used if necessary in
the future, although its data requirements  are more extensive than those of the Cahaba Spreadsheet Model.
                                                   89

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90

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                                 Chapter 7      Research Needs

The research needs for supporting modeling for TMDL  development are as varied as the watersheds and water
impairments throughout the  United States.  Examining research needs for modeling  must address many issues,
including the interface between users and models; the fundamental science and physically based processes employed
by models; and the supporting framework of reference data, training and application guidance.  This section builds
on  the previous  model  evaluations and  case  studies to  identify key  recommendations for model capabilities,
supporting tools and systems.
Methodology for Identifying Research Needs
In Chapters 1 and 2, the needs for TMDL modeling were
discussed and some of the critical limitations in existing
models identified.   Chapter 3 focused on the general
types and formulation  of models.   In Chapter 4, the
available  models   were  identified  and described.  In
Chapter  5  the  models'  capabilities  to meet  specific
TMDL analysis needs were discussed.   Applicability of
models was  evaluated  across  multiple  performance
criteria, including  hydrology,  sediment, water  quality
simulation,  BMP   simulation,  and  user interface  and
supporting  tools.   Examination of  the model  review
tables also highlighted areas where models can provide
detailed   and   comprehensive   representation   (e.g.,
eutrophication   processes).   In   addition,   integrated
modeling  systems  were  discussed  and  the   current
availability  of modeling  linkages and supporting  tools
reviewed. Chapter  6 demonstrated the  use of multiple
linked models in the evaluation of TMDLs for mercury
and nutrients.  The  review and case studies demonstrated
some of the current strengths and limitations of modeling
systems.   A variety of supporting tools were needed in
the analysis and the case studies showed a diversity of
approaches  used.  Depending on the pollutant type and
critical conditions  the emphasis of the  modeling varied.
The case studies indicated that continued work is needed
in supporting the  various linkages and expanding the
science of nutrient/algae and mercury  simulation.
       Dominant Trends in Application Needs

Integration of water systems. Many traditional models
specialize in individual waterbody types such as lakes,
rivers, or estuaries. Watershed-based studies may require a
comprehensive assessment on a larger scale and the ability
to evaluate multiple management alternatives.  Increasingly,
modeling studies need to address the linked behavior of
multiple surface waterbodies or multimedia, including rivers
and lakes, estuaries, and coastal regions. In other
applications, considerations  of interactions between air,
surface, and groundwater need to be evaluated.

Model Complexity. The typical perception of scientific
progress is a trend to develop increasingly detailed physical
representations of systems.  This trend is demonstrated by
the use of physically based models, models that include
solutions of fundamental equations, and 3-dimensional
representations of waterbodies.  However, in TMDL and
watershed-based applications, there is an equally strong
need to employ simplified  solution techniques.  Users are
searching for reasonable simplifications, practical solutions,
and easily applied tools.  The need for simple techniques is
driven by data, time, and resource constraints.

Management Planning. TMDLs  and related watershed-
based programs (e.g., NPDES stormwater, 319 NPS plans)
are moving toward implementation planning and
assessment. Implementation planning requires analysis of
BMP performance, management alternatives, and
consideration of cost.  Implementation planning might
include examination of multiple solutions and selection of
preferred approaches based on a broader assessment of
efficiency, cost and social-political considerations.
To identify specific recommendations for future development, the modeling needs were evaluated in the context of
TMDL requirements and watershed applications, current trends, and evolving model application needs. In addition,
the needs analysis recognizes that future model development efforts can exploit emerging technology in computer
hardware and software, Internet access, and current research. Historically, several leaps in modeling interfaces and
user support tools occurred with the emergence of GIS technology.  The convergence of disparate technologies and
science continue to provide an opportunity for innovation and significant expansion of the capabilities of models and
applicability of more detailed, physically based simulation techniques.

Modeling systems or interface  development  has always been closely linked to the availability of new computing
technology.  Early advances in modeling were closely linked to the availability of personal computers (1980s) and
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later the emergence of GIS (1990s).  Technological advances continue to provide opportunities to facilitate model
application.  Creative adoption of new technologies can profoundly change the ways that users work with data and
models in the future. New technologies also can influence collaboration during model development and review and
interpretation of model results. Key recent and potentially relevant technological advances include:


    •   Significant increases in computing speed and parallel processing  capabilities  can support more complex
        and computationally intensive applications.

    •   Reduction in cost and increase in size of data storage devices allow users to store and process much larger
        datasets efficiently.

    •   The proliferation of broadband access can facilitate data access, remote data storage, and on-line analysis
        capabilities  (e.g., databases, mapping, searches). Broadband can affect all stages of model development
        and application.

    •   Research  and development of  "grid-based"  computing  technologies and "middleware"  can provide
        techniques for Internet-based data exchange, data management, and distributed computing techniques.

    •   Visualization software is now more widely available and affordable. Broader availability of visualization
        software encourages use of dynamic displays and interpretative tools for modeling results.

    •   Remote sensing  systems and software are available and can more reliably provide spatially heterogeneous
        land cover, stream quality, soil moisture, and precipitation information.


The following sections provide specific recommendations developed by combining an understanding of the needs
with the  availability of  modeling tools and the  emerging technological trends.   Some  recommendations for
supporting tools and guidance are also identified. Application of models also relies on the availability of appropriate
guidance,  reference documents, and supporting information.  Specific needs for model support are identified as well.
The recommendations provided below are organized in the following major areas:
    •   Model capabilities

    •   Data

    •   Model defensibility

    •   Systems development/supporting tools

    •   Integrated modeling systems
Model Capabilities
Currently  available models support assessment of a range of sources and
waterbody types.  Described below are recommendations for enhancing and
broadening the capabilities of models to encompass specific source behavior,
provide more  sensitivity to management changes, and improve resolution of
results.  These changes could be implemented by enhancing existing modeling
systems or through development of new models or supplemental components.
Where  appropriate,   enhancements  or  updates  for  specific models  are
recommended.  The recommendations are grouped according to sources (e.g.,
irrigation,  septic  systems) and  functional  groups, including  hydrology,
sediment,  nutrients,  pathogens,  ecological simulation,  and  evaluation  of
management practices.
This section discusses model
capabilities for the following topics:

  Sources
  Hydrology
  Sediment Loading
  Mercury
  Pathogens
  Management Practice Simulation
  Hydrodynamics
  Sediment Transport
  Nutrients/Eutrophication
  Ecological/Habitat
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Sources
Development of a TMDL allocation includes the distribution of the load among sources. Sources are often grouped
in categories and subcategories such as agricultural and urban areas. Source groupings may vary in detail and type,
depending on the regional dominance of source types and the desire of the TMDL developers to  explore source
behavior and management options.  In some applications, dominance of a particular  source type or the dynamic
nature of source behavior (e.g., time variable management or change) will require new modeling approaches or more
refined, detailed model development.  Listed below are  the major research needs that have been identified for
improving representation of source behavior in models.


    •   Variable Land Use and Cover.  Existing watershed models should be enhanced through improved spatial
        data interfaces or new models developed to better simulate time-variable land uses or changes in land use
        management activities over time.  Currently, watershed models are applied based on a fixed or static land
        use coverage.  Future or alternate land use configuration is represented by using a separate, static land use
        coverage.  Remote sensing technology could provide a more dynamic representation of historic land use
        conditions.  Land use planners also simulate projections of land use conversion over time.  A system that
        can integrate land use simulation and watershed modeling in one framework could be used to dynamically
        incorporate  land use conditions and  the effects on watershed loading.  Variable land  use  and cover
        representation can improve  the  accuracy of predicted conditions compared to  historic flow  and water
        quality measurements.  This type of dynamic land use change could be especially important for western
        watersheds where timber harvesting  and fires  can dramatically change conditions in a matter of years.
        Similarly,  areas  experiencing  rapid  urban  growth  could  be  modeled   more  accurately  through
        implementation of a variable  land use  schema.   The LEAM  provides an approach for  simulating the
        evolution of urban systems by using the Cellular Automata approach combined with the open architecture
        tools of STELLA  and SME (http://www.rehearsal.uiuc.edu/projects/leam/).  LEAM  simulates land use
        transformation and  effects  on  multiple metrics, including water  quality.   Potential linkage of this
        technology with more detailed representations of water quality processes will benefit TMDL evaluations of
        dynamic land use conditions.

    •   Tile Drainage.  Existing watershed  models (e.g.,  GWLF, HSPF/LSPC) should be enhanced to  better
        simulate the hydrologic and water quality  effects of tile drainage.  Many areas of the country include
        extensively  drained  areas that  affect the  hydrologic response  of the  system.  Models  that include
        capabilities for representation of drainage and examples of their application are needed.

    •   Irrigation.  Irrigation practices have a significant effect on the water balance, runoff, and water quality of
        watersheds.  Irrigation transfers water from surface and groundwater sources and increases water available
        for evapotranspiration.  Better tools for assessing effects  of irrigation on water quantity and quality could
        be built into existing watershed models. Significant modeling work has been done to simulate irrigation for
        agronomic purposes.   For example,  watershed models  such as HSPF  and GWLF  do not explicitly
        incorporate irrigation practices.

    •   Roads.  Paved roads provide significant impervious coverage, and unpaved roads are often major sources
        of sediment. Existing models  can be used to represent a variety of surfaces through use of pervious and
        impervious land use coverages, but a more systematic approach (similar to WEPP) could be  incorporated in
        frequently used watershed models (e.g., SWMM, HSPF, SWAT) to enhance their ability to  accurately
        account for loadings from different types of roads.

    •   Septic Systems.  Septic systems are a potential source  of nutrients and pathogens  in many rural and
        suburban areas. Watershed models do not typically include a standard approach for representation of septic
        systems.  Potential septic system loading is often estimated as a function of failure rate and provided as a
        direct input  (i.e., discharge) to watershed models. Septic  system loading is typically a function of location
        (proximity to waterbodies), failure rate, and water table elevation.  Currently available watershed models
        should be enhanced to simulate nutrient and pathogen loads from septic systems.

    •   Coalbed Methane.  In western states (e.g., Wyoming), coalbed methane extraction has  resulted  in the
        discharge  of waters  with elevated concentrations of sodium and total dissolved solids.   The water has
        limited suitability for domestic  and  animal consumption—its  high saline and  sodium content make  it
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        unsuitable for agriculture—and it has the potential to damage wildlife habitat and surface water supplies.
        These issues have been the central focus of TMDL development efforts in the Tongue River, Powder River,
        and   Rosebud   Creek   watersheds   in   southeastern   Montana   and   northeastern   Wyoming
        (http://www.deq. state.mt.us/wqinfo/TMDL/TonguePowderRosebudTMDL.asp).   Currently,  the effect of
        coalbed methane is simulated using simple mass balance approaches or with  continuous watershed
        modeling that addresses only direct discharges.  Both of these approaches simplify the in-stream kinetics,
        however, and do not address the potentially significant affects on groundwater from leaking containment
        ponds.  Modeling could be improved by better integrating detailed groundwater models  with existing
        watershed models, as well as obtaining additional data on the fate and transport of discharge water that is
        pumped to containment ponds.
Hydrology
Hydrology in watershed models is well understood, and various levels of simulation are available in numerous
models (e.g., GWLF, SWAT, HSPF, SWMM, GSSHA).  Depending on the specific application, annual, seasonal,
daily, hourly or smaller timesteps can be used, and  simulation can include sensitivity to rainfall intensity.  Many
models  include various formulations for  representation  of snow accumulation and  melting processes  as well.
However, improvements could still be made in the application and understanding of existing models, the structural
formulation of hydrologic systems (e.g., representation of land surface), and surface-groundwater interactions.  In
addition  to  the traditional hydrology  modeling systems, there has been a growing trend  toward  developing
physically based distributed watershed models over the past decade. These models are  necessary because  decision
makers are  asking questions  that require  a more refined examination of the spatial  heterogeneity of watershed
systems.  Distributed models have the potential to examine changes in management techniques, provide sensitivity
to fine variations in location and changes in slope  or regrading, and represent a  diversity of soils and land use
characteristics.  Distributed models can predict  at spatial scales smaller than what can be modeled with lumped
parameter models. A distributed model's primary advantage is  its physically realistic representation of hydrological
and pollutant transport processes, instead of the generalizations used by lumped models.  Key limitations are the
availability of spatially distributed soils and management information, lack of water quality simulation capabilities,
and the processing time required for analysis.  Recent advances in remote  sensing,  availability of spatially detailed
data, and computer processing capabilities continue to support the application of distributed models. The distributed
models will remain an essential part of research designed to understand watershed system processes.

The following are the primary research needs regarding model simulation of hydrology:

    •   Models Based on the Soil Conservation Service (SCS) Curve Number Equation.   Guidance should be
        reviewed, tested, and developed  on where the use of the simplified SCS Curve  Number approach is
        adequate for continuous hydrologic simulation.  The  Curve Number approach is used in models such as
        GWLF  and SWAT  (one option) that are employed in many  TMDLs; however, the Curve  Number
        (developed for event volume estimation) can provide biased and inappropriate estimates of hydrograph
        components in certain soils and landscapes.  The use  of Green and Ampt  or other alternative  infiltration-
        based approach should be provided as an alternative, similar to the optional formulation provided in
        SWAT.

    •   Spatially Distributed  Meteorologic Data.   The Next Generation Weather Radar (NEXRAD) system,
        operated by  the U.S. Departments of Defense,  Commerce, and Transportation,  provides data  and
        processing  software for weather observations  throughout  the  United  States. This  system  operates
        approximately 159 Weather Surveillance Radar -  1988 Doppler (WSR-88D) stations throughout the United
        States  and  select international sites, with  data  available  through  the National Climatic Data  Center.
        Through the transmission and reception of electomagnetic signals, the system provides improved spatial
        and temporal resolution of rainfall estimates over traditional rain gage networks.  This increased spatial
        precision of rainfall estimates may improve hydrologic simulation  capabilities.   To fully use the NEXRAD
        data for input, watershed models must include similar capabilities in simulating spatial variability. Grid-
        based watershed models can provide more of a one-to-one linkage to spatially  variable meterological data
        for input.  For lumped parameter models  spatial data would need to be distributed by subwatershed.
        Because  the datasets involved are extremely large, techniques are needed to  process  and input data into
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    either watershed-based  or  grid  cell-based watershed modeling systems.   The NEXRAD  system has
    functioned since 1988, but the number of stations and length of historic records for each station vary.
    Stations are continually added to the system, but many of them are limited to more  recent years.  As a
    result,  use of NEXRAD  data for  model  configuration  also limits the period of  simulation.  Model
    calibration may require simualtion of longer periods for analysis of model performance based on statistical
    methods.  Also, the use of NEXRAD data can confine simulation to recent years that do not indicate long-
    term or critical conditions necessary for analysis of the TMDL. Therefore, rainfall gage networks are often
    selected over NEXRAD data for calibration and validation of models.   This limitation will diminish as
    more data are collected over time.

•   Meteorologic models can also be used to develop grid cell-based estimates of time variable meteorologic
    inputs  (http://www.waterboards.ca.gov/lahontan/TMDL/Tahoe/Tahoe  Index.htm).  Ultimately, input of
    time varying and spatially  detailed  meteorologic information can support more accurate calibration and
    application of watershed models, particularly in  the prediction of hydrology.   Hydrology is particularly
    sensitive to variations in the spatial distribution of precipitation and temperature.

•   Grid-Based Models.   Most traditional watershed models are built on a lumped parameter network of
    subwatershed units and stream reaches.  The hydrologic connectivity between these components is used to
    route runoff through the system.  This type of configuration is appropriate for the prediction of downstream
    hydrographs and is particularly well  suited to systems that have a well-defined hydrologic network.  Some
    limitations of this formulation are the necessary "lumping" of heterogeneous spatial information (e.g., soils,
    slopes, land use) into virtual land units within each subwatershed.  Grid cell-based models have potential
    applicability  in areas  with  more  complex  or  low  gradient  hydrologic  systems,  areas  with  highly
    heterogeneous soils or land use  practices, and areas with surface-to-groundwater interactions (i.e., high
    water tables). Development and testing of grid cell-based models, and improvement in the development of
    input data and computational efficiency, are needed to bring this class of models into practical application.
    Linkage of the  hydrologic  processes to water quality  simulation is needed to provide the water quality
    analysis needed for TMDLs.

•   Surface-Groundwater Models.  Currently, watershed-scale  simulation is largely confined to conceptual
    and pseudo-distributed surface water models that are poorly linked to subsurface models or have  highly
    simplified representation of subsurface storage and transport.  Traditional watershed models have used
    groundwater components to calculate stream baseflow.  The groundwater simulation was not oriented to
    addressing dynamic water tables, changes in baseflow due to groundwater withdrawals, or more dynamic
    interactions between surface and  groundwater systems.  As the realization increases that groundwater and
    surface water are closely interconnected and need to be thought of as one hydrologic system, studies of
    their conjunctive use and  management  are  also  increasing. If one or the  other  system  is modeled
    independently, a technique must  be found to represent changes in the other system in the model, but such
    techniques usually have serious limitations related to reconciling the  scale and averaging  across the
    interface.  A more accurate approach is to model  the systems as a single integrated system. This approach
    can account for process changes in both the groundwater  and  surface water systems and  their mutual
    interaction as such changes occur.  Presently, there are watershed and groundwater models that solve
    various  components of  the hydrologic cycle. However,  there is no single  model that  solves the entire
    hydrologic cycle in satisfactory detail. Nor are there any models that include dynamic transport and fate of
    distributed pollutants in both surface  and subsurface regimes.

    In many areas with low  gradients, hydro-modification, and high water tables, the surface and groundwater
    systems are tightly and dynamically linked.  Evaluation of management and source loading implications, in
    these cases, requires consideration of groundwater and surface water interactions.  For example, in many
    areas of Florida, the  management  of water quality in canal  systems  requires concurrent and  linked
    evaluation of water table elevation, groundwater quality, canal and lock operations, evapotranspiration, and
    rainfall-runoff processes. Although a number of detailed watershed hydrologic models  and groundwater
    models are available, they are not dynamically linked.  Some applications have used a linkage between
    HSPF using variable water table options and the USGS's MODFLOW.  Few models are designed with this
    capability, and the currently available models are proprietary (e.g., MIKE SHE). Continued research and
    testing of linked surface and groundwater models for areas with high water tables and  complex hydrology
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        are a significant need. Enhancement, linkage, or new development of public domain or open source models
        are also encouraged.

        Among the numerical methods for solving hydrology and transport equations, the finite difference method
        seems to be more popular for the ease of implementation and its relative simplicity. However, the finite
        element method has potential for addressing more complex geometries and should be further investigated
        for addressing hydrologic simulation.


In general, watershed hydrologic modeling research must continue to modify and improve existing algorithms to
more accurately account for  physical processes,  especially  as affected by altered hydrology, sediment erosion,
interaction with  groundwater,  and watershed restoration alternatives, such as BMPs and constructed or restored
wetlands. Watershed modeling's future is very strongly linked to investigating interactions between runoff processes
and  chemical  and biological  processes, which are crucial  for water quality  predictions (sediments,  nutrients,
contaminants, etc.).  One  solution is  to develop  a  hybrid hydrologic model, in which an adaptive selection of
kinematic,  diffusive, or dynamic wave approaches can be made over all ranges of slopes in a watershed.  The
hydrologic models must be linked to dynamic contaminant transport in the overland planes, transport in the rivers,
vertical transport in the unsaturated zone, and multidimensional transport in the saturated aquifer zone.
Sediment Loading
Watershed models have  been extensively used to estimate overland flow or runoff sediment loads  to  surface
waterbodies.   For  example,  HSPF  and LSPC  essentially  predict  a sediment  mass  loading time function
corresponding to the flow hydrograph for each subwatershed or watershed unit.  For pervious surfaces, the empirical
formulations incorporating gross watershed characteristics, such as land use, slope and antecedent conditions, are
used to predict the mass loading, but for impervious surfaces, a particle buildup and washoff approach is used.
Other models, such as  SWMM, SWAT, and GWLF, use formulations based on various versions of the USLE to
generate sediment loading as a function of soil, slope, and precipitation characteristics.  Some models specialize in
sediment loading and include more detailed spatial heterogeneity such as KINEROS, GSSHA, and WEPP.

Linking or transferring the sediment mass loading time function from the watershed to the receiving water model
generally  requires user definitions of how  the total sediment mass loading is distributed among sediment type
classes simulated in the receiving water model. Both the empirical approach for total loading and the necessity of
user intervention to define the sediment type distribution for linking with the receiving water model pose  limitations
on predictive ability.  Similar to many other modeling needs, improvement in sediment calculations is needed across
the interface between watersheds and receiving waters, including dynamic changes in head-cutting of channels, rill
erosion, stream bank erosion, and riparian zones. Most often, the calibration process for linked watershed-receiving
water sediment modeling requires that the watershed component be interactively calibrated with the receiving water
model, with the watershed loading as a primary calibration parameter for the receiving water models.  Because the
physics of sediment transport on impervious surfaces and saturated pervious surfaces in the watershed are the same
as those in stream channels, there is considerable opportunity to improve the ability of watershed models to predict
both the total mass and size distribution of sediment loads by the incorporation of a higher level of physics with
more quantitative information regarding soil types.

Research  needs vary depending on the application type.   For large multipurpose applications, often including
multiple endpoints, enhancement  of traditionally used watershed models is needed.    For more specialized
applications focusing on sediment management, enhancement or development of sediment modeling systems is the
focus.  The following are major research needs for simulation of sediment loading:


    •   Enhancement of HSPF/LSPC  Sediment Simulation.  HSPF/LSPC have been used extensively for
        TMDL development, including many applications where sediment and  sediment-associated pollutants are a
        concern.  Improvement of the sediment simulation capabilities in these particular models would be of great
        benefit to many  large-scale watershed and TMDL studies.  Use of kinematic and diffusive wave theory
        incorporating vegetation resistance slope variations in a watershed unit would improve estimates of flow
        stress responsible for surface erosion.  Likewise, a better quantification of soil properties  would allow the
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        differing processes responsible for cohesive and noncohesive resuspension to be represented.  These two
        improvements would contribute  significantly  to the ability of a watershed model  to predict  sediment
        loading by sediment type.  HSPF/LSPC would also benefit from an alternative formulation that would
        allow use of USLE-type erosion algorithms  (rather than the Negev model).   This  would facilitate the
        derivation of parameter values directly from USD A soils databases.

    •   Refine SWAT Modified Universal Soil Loss Equation (MUSLE). Review, validation, and refinement of
        SWAT MUSLE implementation are needed. The code appears to contain a units error for MUSLE, and the
        implementation for Hydrologic Response Units containing impervious land can be improved.

    •   Update SWMM Sediment Simulation. SWMM is  also a commonly applied watershed model that would
        benefit from an improved sediment  simulation capability. This  improvement would enhance the  ability of
        SWMM to be used in mixed land use watersheds.  The current SWMM  system uses the original USLE
        formulation parameterized based on land unit characteristics. SWMM's current approach could be updated
        to the more recent formulation of MUSLE with the ability to set land unit-specific parameters.  Additional
        improvements could be achieved by allowing for seasonal or year-to-year variations in settings.

    •   Overland Sediment Transport.  Models for describing sediment transport in shallow overland flow need
        improvement.  Currently  used equations  were developed for channel  flow  conditions,  which  differ
        significantly from shallow, overland flow conditions.

    •   Distributed or grid-based modeling systems. Additional research, development, and applications of grid-
        based hydrologic and sediment modeling  systems are needed.  These models show promise for detailed
        spatially heterogeneous applications, can link more effectively with receiving waters and riparian areas, and
        can be used to evaluate a variety  of spatially detailed management techniques.  Further research is needed
        to demonstrate their efficacy and demonstrate their use in TMDLs.
Pathogens
Pathogen sources, transport and behavior in water (e.g., growth and decay) are  represented in general forms in
several models including HSPF, LSPC, and SWAT.  Pathogen predictions, in particular fecal coliforms and E. coli,
are extremely variable and unreliable. Localized sources (e.g., wildlife) can significantly effect pathogen modeling
results.  New genetic identification techniques  have been used to identify specific sources present in discrete
samples; however, analysis of discrete and  limited  samples is insufficient to describe the dynamic loading of
pathogens from multiple sources.  A complicating  factor is the use of new indicator organisms for pathogen
presence including E. coli and enterococci.  For example, Georgia's Environmental Protection Department recently
added E. coli in upland streams and enterococci in coastal waters to the existing fecal  coliform bacteria criteria.
New indicators have additional limitations resulting from the  lack of data,  historic records,  and modeling
experience.  Several specific recommendations below suggest enhancements  or alternatives to current modeling
techniques.


    •   Statistical Modeling of Pathogens.  Guidance and additional techniques for modeling pathogens using
        statistical techniques are needed.  Building  statistical models that associate sources or localized loading
        potentials could help support evaluation of management alternatives.   Simple spreadsheet tools could be
        developed to facilitate analysis.

    •   Guidance.  Examples, guidance and applications of modeling E. coli and enterococci should be developed.
        An expanded dataset and compilation of available source loading and die-off characteristics would assist in
        parameterizing models. Increased data collection will assist in developing calibrated applications.

    •   Genetic Tracer Analysis.  Genetic source typing  can provide a discrete representation of the sources
        present at a particular  location.  Guidance and examples are needed on how to link genetic source typing
        information with dynamic modeling applications.

    •   Growth and Die-off Rates. Models typically represent bacteria behavior by using a first-order decay term.
        However, in many systems, bacteria appear to die-off or regrow depending on environmental conditions.
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        Development of second-order equations or functional relationships that more accurately represent bacteria
        growth and die-off rates would significantly improve modeling accuracy.  The regrowth potential is of
        particular concern in coastal areas with shellfish beds and beaches.

    •   Shellfish Areas.  In tidally influenced areas, often located in the vicinity of shellfish beds and beaches,
        specialized modeling techniques are needed to evaluate loading and associated pathogen  counts.  The
        ability to comply with water quality standards for pathogens in tidal areas strongly correlate to the tidal
        circulation and configuration of the shoreline.  Areas with poor flushing potential are particularly prone to
        high pathogen counts,  in  some cases due to highly localized  sources.  Some  options  proposed  for
        simulation of these  tidal areas  include linkage of watershed models such as HSPF and LSPC to the Tidal
        Prism  Model.  Other techniques have included simplified  loading estimates  using monitoring data or
        genetic tracer information in combination with receiving water models such as the Tidal Prism Model.
        Additional research is needed to better characterize sources and develop protocols for linking monitoring
        with models.
Nutrient Loading Simulation
Watershed models are used to develop estimates of nutrient loading to receiving waters.  For watershed management
or nutrient TMDL development, the simulation might need to provide sensitivity to changes in land use practices
such as fertilizer application, tillage, and land cover management.  Several existing models provide the ability to
track nutrient applications, crop uptake, and nutrient processes in soils. However these  capabilities are  traditionally
available only in agriculturally oriented models, such as SWAT. Nutrient loading is also an issue in mixed land use
or urbanizing areas.  Comprehensive approaches are needed to evaluate changes in land use and the  management of
nutrients in urban areas.  In addition, because atmospheric deposition is a  significant source of nitrogen, models
should provide the ability to track atmospheric sources.  The following areas of research or enhancement of existing
models are recommended:


    •   Mixed  land use watersheds.   Although  algorithms are available to track  accumulation,  uptake, and
        washoff of  nutrients from land  areas, these techniques  are  not uniformly available for mixed land use
        watersheds.  One of the nutrient  loading-related research needs includes providing and facilitating nutrient
        simulation in mixed land use watersheds.

    •   Urban Area Nutrient  Simulation.   Urban areas  can be significant sources of nutrients from fertilizer
        application and pet waste and atmospheric deposition. Most urban models have limited representation of
        the accumulation and transport of nutrients.  Improving the  simulation of nutrients in urban areas could
        facilitate the exploration of management alternatives and the benefits of various education, street sweeping,
        and infiltration or impoundment practices.

    •   Atmospheric Deposition. Most watershed models estimate nutrient availability through pollutant buildup
        and washoff (e.g., SWMM), concentrations in runoff and soils (e.g., GWLF), or more detailed application,
        transformation, and washoff (e.g., SWAT).  Most models do not include atmospheric deposition as a
        discrete source.  For large-scale simulation of the  Chesapeake Bay, HSPF includes a discrete term for
        atmospheric deposition.  The ability to separate atmospheric  nutrients as a source is recommended for
        nutrient budget development and alternatives analysis.

    •   Nutrient Transport Simulation.  Simulation of nutrients should consider the linkage to various pathways
        through overland flow, infiltration to groundwater, or across  riparian buffers.   There is also  a need to
        improve the simulation of nitrogen  and phosphorus transformation in overland flow.  Development of
        improved nitrogen  accounting  models to  allow  better  simulations of nitrogen  transformations and
        availability  of various nitrogen  species in  surface-groundwater systems is needed  as well.  In addition,
        current  models  could be improved by adding or facilitating the simulation of  nutrient  capture and
        transformation in riparian areas (i.e., filter strips, riparian zones).
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Mercury
Mercury simulation continues to challenge modelers due the complex chemical processes and atmospheric source
loading.  Many model applications are limited by field data to characterize toxic and mercury contamination levels
in the sediment bed, which generally are significant sources of water column contamination. Field collection of
such data is often beyond the resources of many model applications. Also, nonpoint sources and nonpermitted point
sources of contamination are difficult to determine. Improved model parameter estimation procedures offer promise
in estimating bed contamination levels and source locations and magnitude for data limited applications.  EPA has
supported the  development  of  simplified  modeling systems (e.g., Mercury  Tool in the TMDL Toolbox), and
continued enhancement of this system is ongoing.  The most detailed modeling techniques  are not in the public
domain.  Detailed models are considerably more  data intensive and difficult to apply.  The mercury case study in
Chapter 6 reinforces the need to continue research and development in mercury modeling, including  continued
improvement in detailed models, development of rates for mercury methylation, model testing,  and linkages
between models. Specific recommendations for improving mercury modeling include:


    •   Detailed Mercury Models.  A public domain or open code version  of the MCM model should be made
        available,  and a user interface and modeling  techniques to facilitate the  application  of the  system to
        decision-making should be provided.  The more  detailed description of chemical processes  should be
        included in a wider distribution of modeling systems.

    •   Fire Mobilization.  Further research is needed in the role of fire in mobilization and transport of mercury
        from the watershed. Recent TMDL development in New Mexico suggests this is a significant factor in the
        watershed mercury budget in the arid West.

    •   Mercury Methylation.  Improved methods are needed to estimate  rates of mercury methylation in the
        stream network (riparian wetlands, hyporheic zone, etc.). Research is needed to improve simulation of
        mercury methylation in the water column (e.g., at metalimnion boundary) rather than  bedded sediment,
        which may be a dominant process in some turbid western lakes.

    •   Model Testing. New evaluation and testing of mercury  transport models on detailed, radio-label studies
        (e.g.,  METAALICUS)  could assist in verifying models.  To  further  refine models, the development and
        statistical  analysis  of large  cross-sectional  databases  are  needed for  correlation between mercury
        methylation rates  and  other  environmental variables  and for correlation between methyl mercury
        concentrations and biotic accumulation rates. Many assumptions are built into various models, but further
        refinement and validation are needed.

    •   Organic Mercury  Compounds.   Model capabilities need  to  be  improved to  simulate other organic
        mercury compounds (e.g., mercuric acetate) derived from anthropogenic sources.

    •   Model  Linkages.   Model linkages  and examples of integrated atmospheric, watershed and waterbody
        models for mercury are recommended. Support is also needed to develop and link air models to  watershed
        models.

    •   Mercury Snowpack Modeling. Evaluation of storage, transformation, and release of atmospheric mercury
        in snowpack is needed for simulation in cold climate regions.
Other Pollutants and Toxics
Other pollutants and toxics addressed by models  can include: PCBs, DDT, Dioxin, other pesticides, and heavy
metals (i.e., copper,  zinc, selenium).  Chlorides,  although naturally occurring, can be  a significant pollutant if
accumulated in toxic amounts.  Various toxics, such as PCBs, DDT, and dioxin, are rarely included in watershed
loading models due to lack of active sources and limited data characterizing their availability, sources, or behavior.
Some actively used pesticides (e.g., atrazine) could be modeled as toxics; however, even these materials are rarely
modeled  on a larger scale because specific data on application rates, decay, and transport behavior are  limited.
Some models  have the flexibility to be parameterized to include soil adsorbed and dissolved concentrations of a
variety of pollutants and toxics, so simulation is possible when needed. Generally required are better techniques for
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evaluation of sources,  setup and parameterization of models, and  examples for  application techniques.   More
information  on rates, constants, and modeling techniques is needed.  One frequently observed need in TMDL
modeling relates to problems associated with irrigated areas and chloride and selenium accumulations.
Chloride and Selenium
Areas of the country affected by irrigation and drainage practices may have elevated concentrations of chlorides and
selenium.   These elevated concentrations have resulted in water quality impairments  and the  need to assess
management alternatives. Modeling of these conditions is rather complex and can require a combination of surface
and groundwater simulation, examination of irrigation and crop management practices, and leaching of pollutants
from soils. The first major limitation of these studies is the lack of reliable, public domain systems for simulation of
surface groundwater interactions.  Ultimately, more robust hydrologic models should include the chemical processes
and accounting for the transport of pollutants (e.g., chloride, selenium, and others) through multiple pathways.
Management Practice Simulation
Management practices can include a combination of landscape management activities (e.g., fertilizer application),
impervious area reduction or control, and various structural management techniques (e.g., detention ponds).  Point
source controls can include reduction or removal of discharges under various treatment technologies.  Nontraditional
point sources can include urban areas under stormwater programs.   Stormwater management, including both
structural  and nonstructural  management techniques, is needed to achieve water quality  improvements under
stormwater program initiatives or for impaired  areas to meet TMDL requirements.  Implementation of TMDL
allocations will typically require a combination of point and nonpoint source control practices.

For TMDL  development,  models are  applied to represent various  levels of point and  nonpoint  source control
sufficient to meet water quality improvements or load allocations.  Models of receiving waters (rivers, lakes, and
estuaries)  can typically evaluate impoundments (e.g., ponds, reservoirs).  Many models do not explicitly include
representation of management practices. For TMDLs, detailed implementation planning is not required, and the
limitations of management simulations are not an initial concern. River, lake and estuary models typically accept
input information on discharges from point sources or upstream tributaries (including point and nonpoint sources).
As discussed previously, many models represent load reduction alternatives through a generalized percent reduction
from individual sources and point source dischargers.  However, a more detailed analysis of management options
requires models that support simulation of practices (or groups  of practices), evaluate the implications of BMP
location, and allow for examination of management alternatives.  As more TMDL studies result in implementation,
the  use of models  for management planning and  alternatives  analysis is  increasing.   Evaluating management
alternatives and considering financial investments will need more sophisticated BMP modeling systems.


    •   Large  Scale Watershed Allocation Strategies.  Continued development of tools that support large-scale
        TMDL allocations at the subwatershed/source scale is needed.  For example, the LSPC system includes
        techniques  for sequential allocations to  multiple subwatersheds  and sources and has been successfully
        applied in systems with thousands of subwatersheds. Additional tools that provide  optimization or cost-
        related analysis and various alterative allocation techniques could facilitate development of cost-effective
        and user-supported allocations.

    •   Comprehensive BMP Simulation Systems. For implementation planning, modeling systems are needed
        that seamlessly provide support for watershed loading analysis, subwatershed and source level allocations,
        and BMP placement and analysis.  The majority of traditional BMPs  (e.g., detention ponds, infiltration
        techniques,  conservation tillage) can be modeled by  one or more systems.   However, the  practical
        application of these techniques on a large-scale watershed-based application is limited.  Most models that
        include BMPs are not easily applied and require significant expertise in setup and adjustment of the various
        BMP  components, resulting in uneven levels  of detail  and incomplete application  for management
        planning.  New comprehensive systems are needed, or existing watershed models should be enhanced  to
        provide the capability.
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        BMP Simulation Techniques. Multiple techniques are available to simulate individual BMPs.  Most rely
        on a combination of infiltration, deposition/settling, and first-order decay. For example, SWMM includes
        techniques for the simulation of detention ponds that incorporate these techniques.  Agricultural models
        include representation of land practices such as conservation tillage and crop rotations. Continued research
        is needed into the transformation and transport of pollutants in BMPs. In particular, most BMP simulation
        techniques provide limited representation of nutrient transformation. A more physically based approach
        could  improve understanding  of the  nutrient removal potential  and  the  movement of  dissolved and
        adsorbed forms through one or more BMPs.

        Riparian Areas.  Riparian zones and stream buffers  filter runoff and remove sediment and pollutants.
        Riparian zones also provide shading with  potential reduction of in-stream temperatures  and improved
        aquatic habitat.   Typical watershed models have limited capabilities  for  simulation of the benefits  of
        riparian zones on water  quality.  The HSPF model has the capability of simulating land-to-land transfer,
        which can be used for limited riparian area simulations. Specialized models such as REMM can be used to
        evaluate individual riparian areas, but research is needed to provide practical techniques that can be used to
        represent the benefits of riparian zones on a watershed scale.

        Bioretention Simulation Techniques.  Bioretention and infiltration practices are  increasingly used  in
        watershed retrofit or new development  applications.   Bioretention is  a commonly used practice in the
        application  of Low Impact Development procedures or in areas where small-scale and  distributed
        management techniques  are employed.   Several models include techniques for simulation  of infiltration-
        type practices; however, more detailed simulation of evapotranspiration as a function of land cover types
        and nutrient/chemical processes  are needed.  Techniques  or monitoring data are  needed to evaluate the
        efficacy of small-scale bioretention practices on watershed scale.

        Economic Analysis of Management Strategies. TMDL allocations are typically selected to  provide  an
        equitable distribution of the load reduction that results in  meeting water  quality standards.   Improved
        techniques are needed  for  evaluating the economics of allocation  strategies and  tradeoffs between
        management techniques. Improved economic analysis tools could result in lower cost allocations and more
        efficient use of resources.  Analysis tools could include cost models, databases of management practice
        cost, or optimization tools.  Research is ongoing to develop optimization tools that support placement and
        selection of BMPs and allow users to select  water  quantity, quality, and cost-related  objectives for
        optimization (Lai et al. 2003).

        Demonstration  of Management Success.  As more  TMDLs are implemented, it will be important  to
        document and demonstrate the reduction of loads and progress or achievement of meeting water quality
        standards.  To demonstrate progress, monitoring of the baseline conditions is needed with follow-up on
        management practice adoption and continued monitoring of the watershed.

        Management Practice  Information.   Datasets  that  compile  information  on  location,  type,  and
        characteristics of structural and nonstructural management practices should be developed and maintained.
        For traditional point sources, such as industrial discharges, states and EPA maintain detailed databases  of
        permit numbers,  location, and discharge monitoring records. However, for nonpoint source and stormwater
        BMPs, the estimation of load reduction opportunities is  often limited by  a lack of consistent information on
        management practices.  If information is available that includes the areas served by BMPs, models  or
        simplified accounting techniques can be used to evaluate  potential progress made toward load reduction
        targets and the potential for additional management.
Hydrodynamics
Hydrodynamic modeling of surface water systems is very mature.  Model physics is well established, and three-
dimensional model applications are now the norm for coastal, estuary, lake, and reservoir applications.  The major
challenge in hydrodynamic modeling tends to be model run time, as grid resolutions  become finer  and model
simulation periods increase. Key recommendations include:
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    •   Models and systems that support parallelization of hydrodynamic  model codes are essential to address
        demands of finer spatial resolution and extended simulation periods.

    •   Additional software is needed to facilitate model input data preparation and display and animation of output
        data.   Although propriety systems have been  developed, a broader distribution and support of public
        domain systems are needed.   The  EPA TMDL Toolbox includes  a public  domain EFDC interface.
        Continued development of user support tools is needed.
Sediment Transport
Sediment transport remains the major unsolved problem in hydraulic engineering and environmental fluid dynamics.
With respect to  clean and contaminated sediment TMDL development and contaminated sediment remediation
studies at Superfund sites, predicting the source of in-stream sediment and associated sorbed contaminants and their
ultimate fate remains a particularly difficult problem.  Sediment sources include erosion or resuspension of the in-
stream sediment bed, bank erosion including mass failure during  high flow events, and sediment delivered via
overland flow from adjacent watersheds.   Recommendations for improving source  loading capabilities were
discussed above.  Key recommendations for improving sediment transport capabilities are provided below.


    •   Laboratory and Field Research.   For resuspension and erosion of in-stream  beds,  fairly reliable
        experimentally derived relationships are available to parameterize resuspension under homogeneous bed
        conditions where either cohesive or noncohesive sediment  classes dominate a system.  Garcia and Parker
        (1991) provided a critical evaluation of the predictive ability of widely used formulations for noncohesive
        sediment resuspension, and their findings remain valid today—15 years later. Recent formulations for the
        resuspension of cohesive sediment are exemplified by the work of Sanford and Maa (2001) and Lick and
        McNeil (2001). However, most natural surface water systems are characterized by heterogeneous sediment
        bed mixtures.  For example, relationships for noncohesive sediment resuspension typically fail  to be
        predictive when  the cohesive fraction approaches  10 percent.  Because laboratory results necessary to
        parameterize resuspension of heterogeneous sediment mixtures are extremely  limited—Gailani,  et al.
        (2001) being a notable exception—recourse  must be made to expensive site-specific field resuspension
        studies, which are well beyond the budget for many sediment modeling applications.  Laboratory and field
        research as well as accompanying theoretical studies are needed to develop heterogeneous bed resuspension
        formulation for use in surface water models.

    •   Stream Bank Erosion - Simple Methods.  Bank  erosion is  a significant source of sediment in some
        stream systems and can be a source identified for load reduction in TMDLs.  Techniques are needed to
        evaluate the potential source as a function of local physical and hydrologic conditions. Existing watershed
        models should be updated to include a stream bank erosion  source to help account for the sediment sources
        during calibration and for evaluation of allocation alternatives. In addition, information or techniques that
        relate management actions (i.e., reduced imperviousness,  riparian buffers) to  the potential reduction of
        stream bank and channel erosion are needed to demonstrate potential restoration.

    •   Laterally Averaged Bank Erosion Techniques.  Bank erosion is likely  the primary source of excessive
        in-stream sediment levels and  contributes  to  event-driven redistribution of contamination.   Several
        sediment transport models incorporating mass failure erosion of cohesive sediment  banks have been
        developed using the bank stability  approaches  (Darby and Thorne 1996b).   They include the model
        reported by Darby and Thorne (1996a) and the USDA-ARS CONCEPTS  model (Langendoen 2000), both
        based on one-dimensional longitudinal hydrodynamic and  sediment transport.  The CONCEPTS model
        incorporates a piecewise  description of the channel bed perimeter with  the steeper side portions of the
        perimeter representing the banks. Although appropriate for many applications, the averaged cross-sectional
        approach is a simplification of bank erosion and overbank processes.  Providing a more efficient approach
        for application of CONCEPTS would assist in broader application of the technique.  CONCEPTS has been
        applied  with AGNPS and is included  in the EPA TMDL Toolbox.   Developing a  linkage between
        watershed models (LSPC, HSPF) and the CONCEPTS model would provide additional utility and more
        opportunities for application.
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    •   Multidimensional Sediment  Transport.  Multidimensional  evaluation of cohesive and noncohesive
        sediment transport is needed.  This formulation can be used to evaluate contaminated sediment transport in
        complex river systems.   Continued development of solution  techniques,  sample  applications,  and
        supporting software is needed.  Further research is recommended to test and validate physically based bank
        erosion formulations, such as those in the EFDC  model, and to provide procedures for their application to
        data limited sites.

    •   Turbidity. The ability to predict turbidity (an optical property) from inorganic sediment,  algae, and DOC
        concentrations should be improved and tested.
Nutrients and Eutrophication
Nutrient cycling and eutrophication dynamics in natural waters is fairly well understood.  The major challenge in
nutrient and eutrophication modeling is calibration or estimation of kinetic coefficients and quantifying uncertainty
in model predictions.  Optimization is a possible technique to address this challenge and is discussed further in
Model Defensibility.  In addition, selected areas  of research and improvement can broaden the applicability of
models to various algal species and eutrophication processes.  Evaluation of nutrient processes in the hyporheic
zone, active areas at the interface between receiving waters and riparian or stream beds, could expand applicability
of models.  For the Cahaba nutrient case study the  Toolbox provided many of the needed tools for building the
modeling applications, assessing the various nutrient concentrations and evaluating the algal response.  However,
the ability to model benthic algal and periphyton is still limited and relatively untested.  Specific areas for additional
research in nutrient and eutrophication techniques include:


    •   Benthic Algae.  Benthic algae can be a significant source of impairment in streams.  Some limited
        modeling of benthic  algal response in streams  has been developed (e.g., QUAL2K), and users have
        customized  CE-QUAL-W2  and WASP to estimate  benthic  algal growth. However, simpler, empirical
        methods would be useful additional tools for analysis of streams. To date, these simple methods do not
        adequately account  for effects of scour, which appear to be a dominant control in many streams. Biggs'
        New Zealand work  showed that including "days of accrual" as a measure of scour frequency significantly
        improved ability to  predict benthic algal density  from nutrient concentrations; however, the work in this
        wet climate does not appear directly transferable to Mediterranean-type hydrologic regimes (Biggs  1988).

    •   Macrophyte. Macrophyte processes and hydrodynamics interaction simulation technology are needed for
        riverine and lake systems. The ability to simulate  macrophyte growth and submerged aquatic vegetation as
        a function of nutrient loads is needed for many TMDLs.   A more rigorous and predictive formulation
        should  be developed to  account  for  the  interactions between  macrophytes and  hydrodynamics. By
        predicting not only the  mass  of  macrophyte growth but also  the height  and volume, the effect of
        macrophytes on dissolved oxygen, pH, and water circulation patterns can be evaluated.

    •   Evolution of Macrophyte/Periphyton.   One potential technique to evaluating long-term growth of
        macrophyte and periphyton is to use the Cellular  Automata technology with traditional hydrodynamic and
        water quality modeling technology to simulate evolution of macrophyte and periphyton over multiple years
        (Marsili-Libelli and Giusti 2004). This technology could be extended to simulate aquatic habitat variations
        over time.

    •   Buoyancy-compensating  Algae.   The  ability  to   simulate buoyancy-compensating  algae  (primarily
        cyanophytes) in lakes, integrated with hydrodynamic simulation,  could  assist in better  simulation and
        calibration of local conditions.  Some algae move  according to light and local conditions.  This process can
        affect accuracy of the vertical layers in the simulation model.

    •   Bacterial-Nutrient-Algae Interactions.  Bacteria can be associated with algal processes.  Storage and
        regrowth  of  bacteria  can also  be  linked to algal processes.  Additional research and development of
        simulation algorithms are needed to support linked evaluation of bacteria and nutrients.
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    •   Wetland and Riparian Zone Processes.  Enhanced procedures are needed to address the water quality
        processes that occur at the interfaces between wetland and riparian zones and receiving waters. Because of
        the extensive interactions  between these  systems  multimedia modeling capabilities are  needed.   For
        example, EFDC includes capabilities for addressing wetting and drying  of tidal wetland areas.  Further
        enhancement of these capabilities and the exchange of nutrients could be  beneficial, especially for studies
        that include preservation or enhancement of riparian areas.

    •   Nutrient and Eutrophication Endpoints and Targets.   Closely related to modeling of nutrient and
        eutrophication processes is the  derivation of the specific  indicators or thresholds  used  to  evaluate
        compliance with water quality standards. Some TMDLs are directly keyed to a numeric dissolved oxygen
        standard.  However, in many rivers and streams, the numeric measures of eutrophication  effects are not
        well defined.  Additional research is needed to develop locally derived  effects-based targets for sediment,
        nitrogen, and phosphorus.

    •   Monitoring  to Support Periphyton  and Macrophyte Modeling.  As new modeling techniques are
        developed for periphyton and macrophytes, additional guidance is needed on monitoring techniques, field
        procedures, laboratory analysis techniques, and input parameter development.
Ecological/Habitat
Ecological modeling can provide simulation of conditions that relate to key indicators of designated use support.
For example, an ecological model could predict fish propagation as a  function of habitat conditions.  Ecological
models can be used to evaluate response  of aquatic life to elevated  concentrations of toxics or the effects of
bioaccumulative substances.   Other  systems can  evaluate response  to  habitat conditions,  including  shading,
temperature, and sediment, on fish.  Application of ecological models may go beyond typical TMDL development
needs and address potential changes in water quality criteria or direct interpretation of designated uses or narrative
criteria. Key areas where new or enhanced ecological modeling techniques are needed include:


    •   Impervious Areas Impacts on Habitat. The ability to link changes in storm hydrographs to changes in
        habitat quality and benthic biota response is needed. Impervious areas and associated hydrologic effects
        are widely believed to be associated with aquatic health impairments.  However, the response to changes in
        imperviousness is not easily related to specific, measurable endpoints representative of aquatic health.

    •   Dissolved Oxygen Criteria.  Evaluation of water quality  criteria for dissolved oxygen may require the
        assessment of the effect of low dissolved oxygen on fish.  Improved ecological modeling tools could
        support the development of site-specific criteria, where appropriate.

    •   Bioaccumulation of Toxics.  In areas with contaminated sediment or excess loading  of bioaccumulative
        toxics, additional modeling tools could be used to evaluate bioaccumulation rates. Food chain models can
        be used to evaluate bioaccumulation under various loading scenarios.

    •   Habitat. Techniques are needed to simulate the effects of stream channel habitat indicators on the aquatic
        habit, including stream shading, fine sediment substrates, and flow frequencies.  Traditional approaches use
        a weight of evidence process and statistical analysis to evaluate the response of aquatic life to a variety of
        habitat indicators.  Modeling systems could provide enhanced multimedia analysis techniques to integrate
        the various habitat indicators, predict response to land  use  changes, and evaluate the potential effects on
        aquatic life.
Data
Modeling and environmental analysis  requires data to apply models.   Sufficient  data are needed to verify that
models are performing appropriately and build confidence in model predictions.  Typical data needs include spatial
coverages (e.g.,  soils,  topography,  land cover), water quality monitoring,  point source discharges, management
activities or structures, and land use practices.  Current state and local data collection studies need to  continue to
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support the development of comprehensive and long-term monitoring records. As watershed model sophistication
increases, the demand for more frequent and higher resolution data will also increase to setup, calibrate, and validate
models.  The challenges faced in watershed modeling have reflected the need to deal with spatial variability while
considering the linkages among climatology, hydrology,  biology, and geochemistry. The  more physically based
models require significant information on meteorology and chemistry.  Some of the most important advances in
watershed modeling during the past decade have involved approaches that employ GIS and remotely sensed data.
The availability of GIS coverages and remotely sensed data has stimulated model development and facilitated the
representation of landscape heterogeneity. Continuous improvements in the ability to process very large distributed
sources of remotely sensed and space-based hydrologic and climatic data, combined with advanced data assimilation
algorithms, should lead to benefits in both watershed modeling and TMDL studies. With the use of remote sensing,
radar, and satellite technology, the ability to observe data  over large and inaccessible areas  and to map these areas
spatially  is vastly improved, making it possible to develop truly distributed models.  Identified below are some of
the key areas where new research can facilitate data collection and  improve the quality and comprehensiveness of
data.


    •   Remote Sensing.  Remote sensing provides a technique for developing spatial heterogeneous information.
        Key areas where remote sensing might improve data gathering include Moderate  Resolution Imaging
        Spectroradiometer (MODIS)  satellite data  to  evaluate algae and turbidity in larger fresh waterbodies,
        techniques to reconcile satellite-based  land cover and parcel-based land use information, estimation of
        directly connected impervious areas  (DCIA), and estimation of soil moisture content. Remote sensing
        shows promise for developing detailed representation of soil moisture content that can affect infiltration
        and runoff calculations. NEXRAD data can provide more spatially detailed precipitation data. Spatially
        detailed information could  significantly benefit development and application of distributed (grid-based)
        hydrologic models.

    •   Specialized  Monitoring Guidance. Guidance is  needed on how to collect data for complex environments
        such as SOD,  sediment nutrient fluxes,  reaeration,  photosynthesis and respiration, mixing zones,  diurnal
        dissolved oxygen, periphyton and macrophytes.

    •   Geomorphic Evaluations.   Guidance is  needed on  how best to perform geomorphic assessments to
        determine sediment  impairment, evaluate sources and causes, and provide insights into management
        techniques.  Methods are needed to collect data that can support stream sediment transport and in-stream
        sediment evaluations.

    •   Implementation Monitoring. Guidance is needed on monitoring approaches for measuring water quality
        conditions in large watersheds and evaluating the  performance of management practices. Guidance should
        include targeted and probability-based sampling and management practice tracking techniques.

    •   Testing Data.  Data are needed to verify models at multiple scales.  Many watershed models use individual
        land units as the  fundamental simulation unit.  Existing  models were developed and tested initially on
        small-scale test plots.  The USLE was developed based on an extensive national network for test plots.
        Historically  test plot data  have been  collected  to  support modeling of forest and  agricultural  lands.
        However, similar datasets are not available for suburban residential lands, which comprise significant land
        areas considered in many TMDLs. This information can be used to build a library of loading rates and
        EMCs.  Additional data gathering is needed to describe the national variability in loading from urban and
        suburban land areas.  An approach is needed to improve access to existing  and  ongoing monitoring data
        and standardize data collection approaches.
Model Defensibility
Model defensibility has generally involved two components—the defensibility of the model code or computer
program and the  defensibility of the model application.  Defensibility of the model  computer program, termed
generic defensibility,  is generally inferred  from previous  model applications, peer reviews,  and the  general
acceptability of the model with respect to regulatory agencies.  Although these things are certainly an important
component of generic defensibility,  they provide no guarantee that the  model computer program is verified.
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Verification is here defined as determining if the model program or code is error-free and makes no judgment as to
whether the physical and biogeochemical process upon which the numerical algorithms in the program are based are
correct. Errors have been found and will continue to be found in widely accepted surface water modeling systems.

The emerging discipline of computational science and engineering has developed robust methodologies for verifying
computer models (Roache 1998; Knupp and Salari  2002)  and these  methodologies should  be applied to major
surface water modeling systems.  Generic model verification addresses issues associated with the correctness and
acceptability of the physical and biogeochemical process representation upon which a model is based and  the
accuracy and robustness of the numerical algorithms used in the model code.  Additional guidance is needed on
verification of computer models, and fundamental testing of publicly applied  models should be encouraged and
documented.

The defensibility of each model application is evaluated and documented through a process of model calibration and
validation.  The  model setup  requires parameter estimation as part of calibration and  can include additional
sensitivity and uncertainty analyses.  Calibration is the adjustment of model parameters to achieve an acceptable
level of agreement between model application predictions and prototype observations. Validation is the independent
evaluation of model performance without further adjustment  of model parameters.  A major concern  in  the
demonstration of model defensibility is the lack of consistent techniques, measures, and procedures. Both watershed
and receiving water modeling studies include ample examples of calibration and validation but the measures are not
consistent, and the "goodness of fit" required for various studies is not defined. In addition, the use and accuracy of
models for predictive simulations of future conditions are not well defined.  Key considerations in using models for
alternatives and forecasts  need  to be identified and addressed in more specific  guidance.   Guidance is needed to
support consistent and robust approaches for evaluating model defensibility.  Specific recommendations  include the
following:


    •   Model  Performance  Criteria.   Various  model developers and  reviewers  have  suggested  model
        performance criteria for hydrologic and water  quality simulation of watershed and  receiving waters.
        Standardized statistical tests and application procedures are needed to  provide  a common context for the
        evaluation of model performance. Compilation of a set of typical model performance criteria and measures
        would help standardize model evaluations and documentation and provide additional confidence in model
        predictions by  stakeholders and federal, state, and local agencies.

    •   Model Calibration and Validation  Guidance.   Additional  guidance is needed on model  calibration
        techniques and approaches.   Guidance  can help to standardize  approaches,  statistical techniques, and
        appropriate techniques for rivers,  estuaries, and lakes.  Guidance should define techniques  performing
        uncertainty analysis that put "error bars" on model predictions. New  guidance could build on the initial
        development of generalized modeling guidance provided by CREM (USEPA 2003).

    •   Optimization  Techniques for Model Testing. Optimization can provide a  framework for evaluating
        model calibration,  parameters,  and  measures  of sensitivity  and uncertainty.   A  general  class  of
        optimization-based parameter estimation procedures, including generalized software packages, is available
        but has found limited use in surface water modeling with respect to both nutrients and toxics. Research to
        develop and make available  a number of optimization-based calibration and parameter estimation systems
        compatible with surface water modeling systems is essential. Uncertainty analysis using existing methods,
        including Monte Carlo  and Latin-Hypercube, is rarely used due to the intensity of efforts required, or, when
        they are  used, only limited-duration model  simulations are conducted.  A new class of highly efficient
        stochastic response surface  methods offers  significant advantages for uncertainty analysis and can be
        incorporated in a streamlined manner with optimization-based model calibration.  One  approach is to
        express the level of agreement as an objective function, such as the weighted space-time squared difference
        between  model predictions, and observations, at multiple locations and times, with respect to a set of model
        parameters.  The classical minimization methods require  estimation of the gradients of the objective
        function  sequentially as the minimum condition  is approached.   These  gradients in turn  define  the
        sensitivity of the model's ability to predict prototype observations with respect to model parameters over a
        range of parameter  sets.  Thus, the optimization approach to  model calibration accumulates a significant
        amount of information  on sensitivity.
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The  primary obstacle  to  employing an  optimization-based model  calibration-sensitivity analysis  approach is
obtaining a sufficient number of estimations of the objective function gradients in model parameter space.  The
gradient estimation approach includes brute-force parameter perturbation, tangent-linear sensitivity, and variational
adjoint methods. The later two are extremely promising but have received relatively little attention in surface water
modeling. Given probability distributions of model parameters, the probability distributions of the response surface
can be determined  with significantly fewer model  simulations than are  necessary  for Monte Carlo or Latin-
Hypercube  uncertainty  analysis.  It is highly recommended that further research be directed to this potentially
powerful approach that combines model  calibration, parameter estimation,  sensitivity  analysis, and uncertainty
analysis in a unified and potentially efficient manner.
Systems Development and Supporting Tools
Development and application of models requires trained and experienced modelers.  The development of shared
resources, datasets, and guidance is essential to promoting the knowledge among the user community. Listed below
are the major recommendations for guidance  and tools to  support the modeling community.   Specific technical
guidance is also recommended in the capabilities sections included earlier.


    •   Linkage Tools.   Standards and software tools for model interlinkages  and data transfer need to be
        developed and improved.   Key linkages that should be supported include watershed models to receiving
        water models, such as:  GSSHA/HSPF/LSPC/SWMM to EFDC/WASP or CE-QUAL type models.

    •   Universal Database Systems.  Universal databases  that include water quantity, quality, biological,
        physical  habitat, fish,  and geomorphic data should be provided  to  support model  development, test,
        calibration, and validation.  One option is to link Water Resources Database (WRDB)  in the EPA TMDL
        Toolbox with the Ecological Data Application System (EDAS).

    •   Rates  and Constants  Manual Update.   Databases and guidance are needed on key  parameters and
        datasets used for initial setup  and parameter  selection for models.  The  "rates and  constants" manual
        (Bowie et al. 1985) has provided modelers with an excellent reference document. An updated system could
        include an on-line searchable database and documentation.  Significant experience and data gathering has
        been performed during the past 20 years. Compilation of this new information would be a great service to
        the modeling community.

    •   Application Library.  Model  applications either completed or  under development can provide  a useful
        repository of knowledge and experience.  A library of completed applications, provided on-line, could link
        to project reports, model input  files, parameters used, and documentation of model updates. This library
        could link to available on-line reviews of models, such as CREM (http ://cfpub .epa. gov/crem/)

    •   Modeling Guidance.   Additional guidance is needed on available models, model selection,  calibration,
        application techniques, and allocation procedures, including optimization.   Model guidance could be
        delivered through on-line materials,  case studies, on-line or workshop  training courses, and interim
        technical notes.

    •   Training.  Additional training is needed in watershed and receiving water  modeling fundamentals,
        watershed modeling techniques, and the application of multiple linked modeling systems.
Integrated Modeling Systems
Flexible and adaptable integrated modeling systems are needed that can address the many technical, data, and
systems recommendations identified above. These integrated systems, if developed with a universal format and data
exchange  structure, could share information  and modeling  modules to achieve a variety  of  modeling needs.
However,  in the current development of systems, there are still a multitude of standards, unique data structures and
formats, and disparate systems. EPA's BASINS and Toolbox  systems share information and utilities; however, the
linkage between the various systems is not yet complete.
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Encouraging open  architecture  and modular modeling systems could  facilitate the future  development and
integration of models.  The EPA TMDL Toolbox (http://www.epa.gov/athens/wwqtsc/Toolbox-overview.pdf)  is
designed with an open architecture that could lead to the integration of the individual model components into a
variety of  modeling systems.   Adoption of the most flexible modeling  systems, such  as  Precipitation-Runoff
Modeling System (PRMS)  and MMS, will require continued development, demonstration applications, and more
rapid application timeframes.  Training a broader audience in the development and application of modeling using
these tools will be needed before they will be widely adopted.

The continuous improvement in the science and the description of the physical processes is inconsistently distributed
and adopted by modeling systems. By providing on-line or desktop access to modular modeling components, new
algorithms  can more easily  be  shared among applications. For  example, by building on a hydrodynamic modeling
framework, an unstructured set of modules can be developed to simulate any number  of species of phytoplankton,
zooplankton, macrophytes, or higher-level organisms, including fish. With a flexible set of  modules, models can be
applied at various levels of complexity to address water quality problems and ecological system analysis without the
need for users to modify the code.

Modular modeling systems  provide an opportunity to address many of the specific recommendations for expanding
technical capabilities of models.   If a unified framework is developed, new models or algorithms can share data
management, post-processors, and analytical tools. In an Internet environment, the maintenance of systems and user
support techniques can be more centralized and potentially more efficient.

More aggressive development of Internet-based modeling systems is highly recommended. Internet-based systems
are fully possible with emerging software for GIS, visualization, and data management now widely available and
suitable for practical use. The  maintenance and application of Internet-based software can significantly reduce the
distribution and management of software systems. Internet-based systems reduce the need  to address compatibility
with multiple desktop software and hardware specifications.  The systems can be used without requirements for
desktop proprietary software for GIS or database management.  Software updates can be  provided seamlessly
through a single copy, and model  runtimes can be reduced by the use of parallel processing techniques.

Future systems  can provide on-line access to stakeholders to evaluate alternatives and interactively  examine
assumptions.  The development of on-line modeling systems has another significant potential benefit in providing
public access, transparency of  technical analysis and assumptions,  and interactive interfaces  for community
decision-making. An on-line system can provide a dynamic representation of alternatives where users can select
criteria and see alternative  predictions of results (e.g., pollutant loading, measures of ecological conditions).  For
TMDLs,  systems that allow users to evaluate the load allocation alternatives or implications of various user-defined
choices can encourage more involved and proactive comment and agreement with selection of preferred allocations.
One  example of an on-line user interface is an evaluation of land use patterns and growth developed by the Illinois
LEAM group (http://www.rehearsal.uiuc.edu/projects/leam/KaneFinal/Model6.html') for the Kane County, Illinois,
project. This example is specific to land use planning activities but provides an example of a format and approach
that  could  be used with water quality  modeling approaches.   These more transparent  and inclusive modeling
approaches can significantly expand the  acceptance of models by the community at large.
Conclusions
An understanding of current trends in technology and research can help increase an understanding of how modeling
might evolve and  how to support the  next generation of modeling systems.  However,  anticipating trends is a
"crystal ball" exercise, and sometimes adoption of technology can take surprising turns. This review concludes that,
although significant progress has been made  in model development, major areas of research are still needed to
expand the capabilities, defensibility, and application of models. Research has an opportunity to capitalize on the
emergence of new  data management and processing technologies (e.g., GIS, graphic user interfaces, data collection
techniques (e.g., remote sensing), and the burst in enhanced performance of modern-day computers and Internet
communications.

The research needs identified are diverse and consistent with TMDL and management needs that encompass a wide
range of sources, pollutants, and processes.  The  diversity of the  needs is indicative of the  current status of the
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TMDL program and environmental management applications.  Over the past 10 years, development of analytical
tools has emphasized simulation of dominant pollutants (i.e., nutrients, sediment, metal, pathogens). More recently,
the emphasis has shifted to addressing a more diverse group of listed waters and areas with specialized problems.
Although some of these concerns may affect only a small group of waters, the analytical needs are still relevant.
Continued model development should encourage building linkages and multimedia models that address air, surface
water, and groundwater interfaces more  accurately.  Linkage of meteorlogic, atmospheric, and watershed models
can support the evaluation of potential long-term climate changes. Multimedia-linked models encourage a holistic
and integrated approach to water quality management that can result in improved decision-making.  Grid-based
models show particular promise as a framework for linking multiple media in a more physically based approach.  As
development of TMDLs continues, the most significant emerging need is the evaluation of management options and
selection and determination of optimal solutions.  Ultimately, more comprehensive systems are needed that can
evaluate management options and solutions at multiple scales.

New and more flexible modeling systems  and tools could support a diverse set of technical needs.  Common
databases and GIS systems  can support multiple  solution techniques at various scale and levels of complexity.
Technical innovation can be encouraged by providing integrated systems and work environments that are flexible
and modular.  These integrated systems can provide the commonly needed  tools  and support integration of new
solution techniques, source representation, and algorithms.  In particular for BMP  simulation, a flexible modeling
environmental that  can incorporate new solution techniques will  be beneficial.   Providing integrated system
platforms can help minimize duplication of effort (shared on-line data management, data display, shared resources),
while maximizing resources for more fundamental development and research of key components.

The vision of a consistent, Web-based framework so far has proved elusive and difficult to implement. However,
continued rapid expansion of broadband accesses and Internet-based GIS and data management technology  make
this vision more realistic.  The use of Internet-based technologies has emerged as a viable and practical medium for
management of data, analysis techniques and tools to support TMDL and more generalized watershed analyses.
Development of a standardized Internet-based framework could provide significant cost saving for the management
and application of models.  In  addition,  a standardized  and  open framework, with clearly  defined  linkage
capabilities,  could encourage research and continual testing and update of new components.

Guidance and consistent metrics and methods for assessing defensibility of models and model predictions are critical
needs to support  the  reliable  application of models and  maintain user confidence in applications.  Continued
emphasis on high-quality data collection and guidance on data  collection  methods that  can  support parameter
estimation and testing are also critical needs.

Future development of models and the supporting infrastructure of  data and guidance will improve our ability to
support informed environmental decision-making, help improve understanding of the physical systems in our world,
and ultimately provide information to support the effective restoration and protection of the nation's waters.
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                                            Contents
                             Appendix A. Model Fact Sheets
AGNPS: Agricultural Nonpoint Source Pollution
AGWA: Automated Geospatial Watershed Assessment
AnnAGNPS: Annualized Agricultural Nonpoint Source Pollution Model
AQUATOX
BASINS: Better Assessment Science Integrating point and Nonpoint Sources
CAEDYM: Computational Aquatic Ecosystem Dynamics Model
CCHE1D
CE-QUAL-ICM/TOXI
CE-QUAL-R1
CE-QUAL-RIV1
CE-QUAL-W2
CH3D-IMS: Curvilinear-grid Hydrodynamics 3D—Integrated Modeling System
CH3D-SED (& CH3D-WES): Curvilinear Hydrodynamics in Three Dimensions
DELFT3D
DIAS/IDLAMS: Dynamic Information Architecture System/Integrated Dynamic Landscape Modeling and Analysis System
DRAINMOD: A hydrological Model for Poorly Drained Soils
DWSM—Dynamic Watershed Simulation Model
ECOMSED: Estuary and Coastal Ocean Model with Sediment Transport
EFDC: Environmental Fluid Dynamics Code
EPIC: Erosion Productivity  Impact Calculator
GISPLM: GIS-Based Phosphorus Loading Model
GLEAMS:  Groundwater Loading Effects of Agricultural Management Systems
GLLVHT: Generalized. Longitudinal-Lateral-Vertical Hydrodynamics and Transport
GSSHA: Gridded Surface Subsurface Hydrologic Analysis
GWLF: Generalized Watershed Loading Functions
HEC-6: Scour and Deposition in Rivers and Reservoirs
HEC-HMS: Hydraulic Engineering Center Hydrologic Modeling System
HEC-RAS: Hydrologic Engineering Centers River Analysis System
HSCTM-2D: Hydrodynamic. Sediment and Contaminant Transport Model
HSPF: Hydrologic Simulation Program FORTRAN
KINEROS2: Kinematic Runoff and Erosion Model v2
LSPC: Loading Simulation Program in C++

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Mercury Loading Model: Watershed Characterization System—Mercury Loading Model
MIKE 11
MIKE 21
MIKE SHE
MINTEQA2: Metal Speciation Equilibrium Model for Surface and Groundwater
MUSIC: Model for Urban Stormwater Improvement Conceptualization
P8-UCM: Program for Predicting Polluting Particle Passage through Pits. Puddles, and Ponds—Urban Catchment Model
PCSWMM: Storm Water Management Model
PGC - BMP Module: Prince George's County Best Management Practice Module
QUAL2E: Enhanced Stream Water Quality Model
OUAL2K
REMM: Riparian Ecosystem Management Model
RMA-11
SED2D
SED3D: Three-Dimensional Numerical Model of Hydrodynamics and Sediment Transport in Lakes and Estuaries
SHETRAN
SLAMM: Source Loading and Management Model
SPARROW: SPAtially Referenced Regression on Watershed Attributes
STORM: Storage. Treatment Overflow. Runoff Model
SWAT: Soil and Water Assessment Tool
SWMM: Storm Water Management Model
TMDL Modeling Toolbox
TOPMODEL
WAMView: Watershed Assessment Model with an Arc View Interface
WARMF: Watershed Analysis Risk Management Framework
WASP: Water Quality Analysis Simulation Program
WEPP: Water Erosion Prediction Project
WinHSPF: An Interactive Windows Interface to HSPF
WMS: Watershed Modeling System
XP-SWMM: Stormwater and Wastewater Management Model

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Appendix: Model Fact Sheets
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                  AGNPS: Agricultural Nonpoint Source Pollution


Contact Information
Ronald L. Bingner
U.S. Department of Agriculture
Agricultural Research Service
National Sediment Laboratory
598 McElroy Drive
Oxford, MS 38655
(662) 232-2966
rbingnertgimsa-oxford.ars.usda.gov


Download Information
Availability: Nonproprietary
Required to register prior to download, http://www.ars.usda.gov/Research/docs.htm?docid=5199
Cost: N/A


Model Overview/Abstract
AGNPS is a storm event model developed by the USDA Agricultural Research Service to estimate the pollution
loads from agricultural watersheds and to assess the effects of different management programs. AGNPS is capable
of simulating surface water runoff, nutrients, sediments, chemical oxygen demand, and pesticides from point and
nonpoint sources of agricultural pollution. The different point sources include feedlots, wastewater treatment plants,
gully erosion, and stream bank erosion. As a distributed model, AGNPS  represents the spatial distribution of
watershed properties with a square-grid cells system. GIS interfaces in GRASS or TOPAZ are available to create the
model inputs. The model can be used to evaluate best management practices (BMPs).


Model Features
    •    Distributed, single-event model
    •    Point and nonpoint sources


Model Areas Supported
Watershed             High or medium
Receiving Water        None
Ecological             None
Air                   None
Groundwater           Medium


Model Capabilities

Conceptual Basis
AGNPS calculates surface runoff for each grid cell separately. The  surface runoff calculated in each grid cell is then
routed through the watershed based on flow directions from one grid cell to the  next grid cell until it reaches the
drainage outlet.
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Scientific Detail
AGNPS is a distributed parameter model developed by USD A, Agricultural Research Service (ARS) scientists and
engineers. It predicts  soil erosion  and nutrient  transport/loadings  from agricultural  watersheds for  real or
hypothetical storms;  i.e., it's  an event-based  model.  Its distributed  model design derives from subdividing a
watershed to be simulated into a grid of square elemental areas, assumed to have uniform physical characteristics,
and then applying three lumped parameter models to each element:

    •   Erosion modeling is based on the USLE applied on a storm basis; thus, it uses an El-index but for single
        storm events.
    •   Its hydrology is based on the Soil Conservation Service Curve  Number technique, and it uses the Smith
        algorithm for calculate peak flow rate.
    •   AGNPS uses another ARS-developed model named CREAMS to predict nutrient/pesticide and soil particle
        size generation, transport and interaction. For sediment discharge, AGNPS uses the steady state continuity
        equation, and it uses the Bagnold equation for sediment transport capacity calculation.

Outflows from one  element become inputs to adjacent ones. Thus, AGNPS integrates lumped model predictions for
each element's behavior into a distributed watershed simulation.

Each AGNPS elemental area,  typically about 100 m square, requires  22 parameters (coefficients) to describe its
antecedent conditions, physical  characteristics (e.g.,  soil type and slope steepness), management  practices and
rainfall. To predict NFS pollution,  the USLE, SCS  Curve Number hydrology and CREAMS  relationships  are
computed for each  element as  a function of time. Nineteen output parameters are computed, as a function of time,
for each watershed element.


AGNPS-GRASS developers recommend its use on watersheds up to  20,000 ha. (80 mi2) in size.


Model Framework
Subwatershed or cell-based distributed modeling framework. Modules are linked to calculate hydrology, erosion,
and nutrients loadings cell by cell. GIS interface is used to facilitate the cell-by-cell watershed characterization.


Scale

Spatial Scale
    •   One-dimensional, cell or subwatershed overland
    •   One-dimensional channel network


Temporal Scale
    •    Event


Assumptions
    •   Channels are assumed to have a triangular shape.
    •   Sediment eroded by rill and sheet erosion is assumed to be completely transported to stream without any
        deposition in the fields.
    •   Surface runoff is assumed to flow through a 1 cm soil surface layer.
    •   Chemicals on the soil  surface are assumed to be uniformly mixed with the surface layer.
    •   Infiltration first must pass through the surface layer.
    •   The initial abstraction (la) is the first increment of rainfall prior to surface runoff.


Model Strengths
    •   A distributed model
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    •   Capable of evaluating the effects of many BMPs, such as agricultural practices, ponds, grassed waterways,
        irrigation, tile drainage, vegetative filter strips, and riparian buffers


Model Limitations
    •   Used only to simulate single event
    •   An empirical model
    •   Channels are assumed to have a triangular shape


Application History
AGNPS has been widely used for watershed studies (Hession et al., 1989; Engel et al., 1993; Mitchell et al., 1993;
Srinivasan and Engel, 1994) but mostly to evaluate land use change scenarios. Grunwald and Norton (1999) applied
AGNPS to two small watersheds in Germany to predict runoff and sediment yield and found that the application of
the model to unmonitored watersheds  resulted in considerable under- and over prediction of surface runoff and
sediment yield. Other applications of AGNPS include  Grunwald and Norton, (1999, 2000), Grunwald and Frede
(1999), and Chaubey et al. (1999).


Model Evaluation
SCS has conducted some model evaluation studies, which are available on the AGNPS Web site. A limited number
of studies used measured data to validate the AGNPS model. In a study by  Srinivasan and Engel (1994) comparing
13 measured and simulated rainfall-runoff events, the simulated runoff volume was found to be underestimated for
all events.


Model Inputs
    •   Watershed  delineation,  cell  (subwatershed)  boundaries,  land  slope,  slope  direction,  and  reach
        information—can be generated by TOPAZ, TOP AGNPS and AGFLOW
    •   Daily  precipitation,  maximum and minimum temperature, dew point temperature, sky cover, and wind
        speed—can be generated by the climate data generator, GEM
    •   Management information, land characteristics, crop characteristics,  field operation data, chemical operation
        data, feedlots, and soil information—can be imported from RUSLE  or NRCS sources
    •   If impoundment is present,  then,  elevation-storage power curve coefficient  and  exponent; elevation
        discharge coefficient and exponent; permanent pool stage; runoff event water volume; and incoming mass
        of sediment by particle size and its associated fall velocity


Users' Guide
Available online: http://sedlab.olemiss.edu/AGNPS.html


Technical Hardware/Software Requirements

Computer hardware:
    •   PC


Operating system:
    •   PC-DOS program that works on Windows 95/98


Programming language:
    •   Borland C
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Runtime estimates:
    •   Minutes


Linkages Supported
    •   NRCS GIS-support computer model HU/WQ to prepare input


Related Systems
AnnAGNPS


Sensitivity/Uncertainty/Calibration
Not available


Model Interface Capabilities
    •   GIS interfaces available for creating the model inputs in TOPAZ, GRASS, and Arc/Info


References
Bingner, R. L.  and F. D. Theurer.  2001.  AGNPS 98: A  Suite of water quality models for watershed use. In
Proceedings of the Sediment: Monitoring, Modeling,  and Managing,  7th  Federal Interagency Sedimentation
Conference, Reno, NV, March 25-29, 2001, pp. VII-1 - VII-8.

Bingner,   R.   L.,   F.D.  Theurer,  R.G.   Cronshey,  R.W.  Darden.  2001.   AGNPS  2001   Web   Site.
http ://www. sedlab.olemiss.edu/AGNP S. html

Chaubey L, C.T. Haan, J.M. Salisbury, and S.  Grunwald. 1999.  Quantifying model output uncertainty due to spatial
variability of rainfall. J.AWRA. 35(5):1113-1123.

Engel,  B.  A., R. Srinivasan,  J. Arnold,  C. Rewerts,  and S.  J. Brown.  1993. Nonpoint source (NPS) pollution
modeling using models integrated with geographic information systems (GIS). Wat. Sci. Tech. 28(3-5):685-690.

Grunwald S. and L.D. Norton.  1999. An AGNPS-based runoff and sediment yield model for two small watersheds
in Germany. Trans. ASAE. 42(6):1723-1731.

Grunwald S. and L.D. Norton.  2000. Calibration and validation of a nonpoint source pollution model. Agricultural
Water Management. 45:17-39.

Grunwald S., andH.-G. Frede. 1999. Using AGNPS in German watersheds. Catena. 37(3-4):319-328.

Grunwald, S. and L. D. Norton. 1999. An AGNPS-based runoff and sediment yield model for two small watersheds
in Germany. Trans. ASAE. 42(6):1723-1731.

Hession, W. C., K. L. Huber, S. Mostaghimi, V. O.  Shanholtz, and P. W. McClellan. 1989. BMP effectiveness
evaluation using AGNPS and a GIS. ASAE Paper No. 89-2566:1-18, ASAE, St. Joseph, Mich.

Srinivasan, R., and B. A. Engel. 1994. A  spatial decision support system for assessing agricultural nonpoint source
pollution. Water Resour. Bull. 30(3):441-452.

Theurer, F.D., R.L. Bingner, W.  Fontenot,  and S.R. Kolian. 1999. Partnerships in Developing and Implementing
AGNPS 98: A suite of water quality models  for watershed use. In Proceedings of the Sixth National Watershed
Conference, Austin, Texas, May 16-19, 1999.
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Ward, George H., Jr. and Jennifer Benaman. 1999. Models for TMDL application in Texas watercourses: Screening
and model review. Online Report CRWR-99-7. Center for Research in Water Resources, The University of Texas at
Austin.

Young, R. A., C. A.  Onstad, D. D. Bosch, and W. P. Anderson. 1987. AGNPS, Agricultural Non-Point Source
Pollution Model - A watershed analysis tool. Conservation Research Report 35:1-80. United States Department of
Agriculture, Washington, DC.

Young, R. A., C. A. Onstad, D. D. Bosch, and W. P. Anderson. 1989. AGNPS: A nonpoint- source pollution model
for evaluating agricultural watersheds. J. Soil & Water Conserv. 44(2): 168-173.
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               AGWA: Automated Geospatial Watershed Assessment


Contact Information
Mariano Hernandez or David C. Goodrich
U.S. Department of Agriculture
Agricultural Research Service
Watershed Research Center
2000 East Allen Road
Tucson, AZ 85719-1596
agwa(@,tucson.ars.ag.gov
http://www.tucson.ars.ag.gov/agwa

William G. Kepner or Darius J. Semmens
U.S. Environmental Protection Agency
P.O. Box 93478
Las Vegas, NV 89193-3478
http://www.epa.gov/nerlesdl/land-sci/agwa/index.htm


Download Information
Availability: Nonproprietary
http://www.tucson.ars.ag.gov/agwa/
Cost: None


Model Overview/Abstract
The USDA-ARS Southwest Watershed Research Center, in cooperation with the EPA Landscape Ecology Branch,
has developed the Automated  Geospatial Watershed Assessment  tool (AGWA) to facilitate using spatially
distributed data to prepare model input files and evaluate model results. AGWA uses widely available standardized
spatial  datasets that  can be obtained via  the Internet. The  data are used to  develop input parameter files  for
Kinematic Runoff and Erosion Model (KINEROS2) and Soil  and Water Assessment Tool (SWAT), two watershed
runoff and erosion simulation models that operate at different spatial and temporal scales. AGWA automates  the
process of transforming digital data into simulation model results and provides a visualization tool to help the user
interpret results. The utility of AGWA in joint hydrologic and ecological investigations has been demonstrated on
such diverse landscapes as southeastern Arizona, southern Nevada, central Colorado, and upstate New York.


Model Features
    •   User-friendly interface for generating model input using spatial data
    •   Flexibility in use  from an event-oriented model for small watershed  (>100 km2) to a continuous daily
        timestep model for large complex watershed (>100 km2)
    •   Can be used to evaluate the impacts of land-use changes
    •   Available as an Arc View application or as an integrated part for BASINS version 3.1
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Model Areas Supported
Watershed              High
Receiving Water         Low
Ecological              Low
Air                     None
Groundwater            Low


Model Capabilities

Conceptual Basis
AGWA is a GIS-based system that integrates two watershed runoff and erosion models: an event-oriented model—
KINEROS—and a continuous daily timestep model—SWAT.


Scientific Detail
A fundamental assumption of AGWA is that the user has previously compiled the necessary GIS data layers, all of
which are easily obtained for the conterminous United States. The AGWA extension for Arc View adds the "AGWA
Tools" menu to the  View window and must be run from an active view. Preprocessing of the DEM to  ensure
hydrologic connectivity within the study area is required, and tools are provided in AGWA to aid in this task. Once
the user has  compiled all relevant GIS data and initiated an AGWA session, the program is designed to lead the user
in steps through the  transformation of GIS data into simulation results. The AGWA Tools menu is designed to
reflect the order of tasks  necessary to conduct a watershed assessment, which is divided into five major steps: (1)
location  identification  and  watershed  delineation;  (2)   watershed subdivision;  (3)  land  cover and  soils
parameterization; (4) preparation of parameter and rainfall input files; and (5) model execution and visualization and
comparison of results.

Step 1: The  user first creates a watershed outline, which is  a grid based on the accumulated flow to the designated
outlet (pour  point) of the  study area. If a GIS coverage of the outlet location exists (such as would be the case for a
runoff gauging station), it can be used to designate the drainage outlet. Alternatively, the user has the option of using
a mouse to click on the watershed outlet. If internal gauging stations exist  as a separate GIS coverage,  AGWA will
use them as internal drainage pour points and generate output at  each of the stations. This option is particularly
useful for calibration and validation of model results.

Step 2:  A polygon shapefile is built from the  watershed  outline grid created in step  1. The user  specifies the
threshold of contributing area for the establishment of stream channels, and the  watershed is divided into model
elements required by the model of choice. From this point onward, tasks are specific to the model that will be used
(KINEROS2 or SWAT), but the same general process is followed, independent of model choice.

Step 3: The watershed created in Step 2  is intersected with soil and land cover data, and parameters necessary for the
hydrologic model runs are  determined through a  series  of  GIS  analyses  and  look-up  tables. The hydrologic
parameters are added to the polygon and stream channel tables to facilitate the generation of input parameter files.
At this point, the user can manually alter parameters for each model element if additional information is available to
guide the estimation of those values.

Step 4: Rainfall input files are built at this stage. For SWAT, the user must provide daily rainfall values for rainfall
gages within and near the watershed. If multiple gages are present, AGWA will build a Thiessen polygon map and
create an area-weighted rainfall file. For KINEROS2, users can select from a series of predefined rainfall events
dependent on the geographic location,  choose to build their own  rainfall file through an  AGWA module, or use
NOAA Atlas II return period rainfall depth grids distributed with AGWA. Precipitation files may be created for
uniform (single gage) or distributed (multiple gage) rainfall data.

Step 5: After Step 4, all necessary input data have been prepared: The watershed has been subdivided into model
elements;  hydrologic parameters have been determined for each element; and rainfall files have been created. The
user can proceed to run the hydrologic model of choice. AGWA will automatically import the model results and add
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them to the polygon and stream map tables for display. A separate  module controls the visualization of model
results. The user can toggle among viewing various model outputs for both upland and channel elements, enabling
the problem areas to be identified visually. If multiple land cover scenes exist, the user can parameterize either or
both of the two  models and attach the results to a given watershed.  Results can then be compared on either an
absolute or percent-change basis for each model element (Miller et al., 2002a). Model results can also be overlaid
with other digital data layers to further prioritize management activities.


Model Framework
    •   SWAT
            o   Hydrologic response unit, subwatershed, and watershed
            o   Simple one-dimensional stream and well-mixed reservoir/lake model
    •   KINEROS
            o   Fields/planes and channels
    •   AGWA is based on Arc View GIS interface to process input data for the finest spatial unit of its component
        models


Scale

Spatial Scale
    •   KINEROS: Fields and watershed with channel network.
    •   SWAT: Watershed with channel network, hydrological response unit, or single cell


Temporal Scale
    •   Different models  in the AGWA have  different temporal scales. KINEROS uses a variable timestep
        (normally in minutes) to simulate  a single storm event, and SWAT uses a daily timestep and can simulate a
        watershed over 100 years


Assumptions
    •   Users previously  have compiled the  necessary  GIS  data layers, all of which can be obtained  for  the
        conterminous United States.
    •   Users are familiar with GIS software
    •   Assumptions of the component models. See fact sheets for KINEROS and SWAT


Model Strengths
    •   Includes user-friendly interface to generate model input
    •   Includes more than one watershed model from which to choose
    •   Includes a visualization tool to display  and interpret modeling results
    •   Can simulate watershed in different  spatial (small to large watersheds) and temporal (event-based to
        continuous  daily) scales


Model Limitations
    •   Requires a  large set of GIS data, making it difficult to setup the model for locations outside of the United
        States
    •   Requires proprietary software: Arc View 3.x and the Spatial Analyst for grid operation
    •   May require training to use the advanced modeling options


Application History
The individual models within the model  suite, such as KINEROS2 and SWAT have been  used extensively  for
watershed studies.
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There are several primary intended uses of AGWA. For example, AGWA can be used in a research environment as
a hydrologic modeling tool. Without a rigorous training set for calibration and validation, AGWA is well suited for
watershed assessment using hydrologic response as a metric of change. If multiple land cover scenes are available, a
relative assessment of the  effects of land cover change  on hydrologic response as a function of time may be
accomplished following Miller et al. (2002a).

Preliminary research during the development of AGWA was presented by  Hernandez et al.  (2000). In their study,
they showed that simulated runoff response is sensitive to land cover change in both the SWAT and KINEROS2
models and showed how the assumptions inherent in the look-up tables  determine the direction and magnitude of
change.

Recent research by Miller,  et al. (2002a) illustrated the use of AGWA  in coordinated ecological  and hydrologic
assessment. The authors analyzed of the ecological changes since the early 1970s within the Upper San Pedro River
Basin in southeastern Arizona and the Cannonsville Watershed in the Catskill/Delaware region of New York.


Model Evaluation
See application history and Miller et al. (2002b).


Model Inputs

KINEROS
    •   Overland flow element:
            o   Plane geometry (length, width, and slope), Manning's n, Chezy conveyance  factor
            o   Canopy cover, interception depth, average micro topographic relief, average micro topographic
                spacing
            o   Infiltration related  parameters: saturated  hydraulic conductivity  (Ks), initial  degree  of soil
                saturation, coefficient of variation of Ks,  mean capillary drive, porosity,  pore size distribution
                index, volumetric rock fraction, thickness of soil layers (up to two layers)
            o   Rain splash coefficient, soil cohesion coefficient, and particle class fractions.
    •   Channel element
            o   Type  (simple or compound), base flow discharge
            o   Channel  geometry  (length, width,  bed slope, and bank slopes),  Manning's  n,  and  Chezy
                conveyance factor
            o   Infiltration related parameters (same as specified in overland flow element)
            o   Cohesion coefficient of bed material
    •   Pond element
            o   Initial storage volume
            o   Volume, surface  area,  and discharge rating table
            o   Seepage rate
    •   Rainfall File
    •   External flow file (optional)


SWAT
    •   Land uses (MRLC  and others)
    •   Soil (STATSGO and others)
    •   Topography (30 x 30 m2 DEM or other resolutions)
    •   Subwatersheds (derived from manual or auto delineation tools in BASINS 3.0)
    •   Point Source (PCS  or other database)
    •   Climate data (daily temperature, precipitation, solar radiation, and wind speed)
    •   Crop and management databases
    •   USGS  flow data (for calibration)
    •   Long-term watershed quality data (for model calibration)
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Users' Guide
Available online: http://www.tucson.ars.ag.gov/agwa/


Technical Hardware/Software Requirements

Computer hardware:
    •   IBM-PC


Operating system:
    •   Windows XP/2000/NT/98


Programming language:
    •   AGWA is in Arc View Avenue.
    •   AGWA requires Arc View 3.1 or later and Spatial Analyst version 1.1.
    •   Models SWAT and KINEROS are in FORTRAN.


Runtime estimates:
    •   Minutes to less than an hour


Linkages Supported
AGWA is also available as an integrated part of BASINS 3.1.


Related Systems
    •   Migration to ArcGIS is currently being developed.
    •   DotAGWA, a Web-based interface for AGWA, is also under development.
    •   Better Assessment Science Integrating Point and Nonpoint Sources (BASINS), version 3.1


Sensitivity/Uncertainty/Calibration
The SWAT interface allows basic  model calibration and sensitivity analysis (27 key parameters). No tools were
developed for uncertainty analysis.

In numerous modeling studies,  the KINEROS  model has been  applied on the USDA-ARS  Walnut Gulch
Experimental Watershed. Goodrich et al. (1994) investigated the sensitivity  of runoff production to the pattern of
antecedent moisture condition at the small watershed scale (6.31 km2). They suggested that a simple basin average
of initial moisture content will normally prove adequate and that, again, knowledge of the rainfall patterns is far
more  important.  Michaud and Sorooshian  (1994) compared three different models at the scale of the whole
watershed,  a  lumped curve  number model, a simple distributed curve number  model,  and the  more complex
distributed KINEROS model. The modeled events were 24 severe thunderstorms with a rain gage density of one per
20 km2. Their results suggested that none of the models could adequately predict peak discharge and runoff volumes
but that the distributed models did somewhat better in predicting time to runoff initiation and time to peak.

Goodrich et al. (1997) used data from the entire Walnut Gulch watershed to investigate the effects of storm area and
watershed  scales on runoff coefficients. They concluded that, unlike humid areas, there is a tendency for runoff
response to become more nonlinear with increasing watershed scale in this type of semi-arid watershed, as a result
of the loss of water into the bed of ephemeral channels and the decreasing relative size of rainstorm coverage with
watershed area for any individual event.
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Model Interface Capabilities
    •   Customized Arc View 3.x interface with the capacity to automate the model input creation


References
Goodrich, D.C., L.J. Lane, R.A. Shillito, S.N. Miller, K.H. Syed, and D.A.  Woolhiser.  1997. Linearity of basin
response as a function of scale in a semi-arid watershed. Water Resources Research. 33 (12) :2951-2965.

Goodrich, D.C., TJ. Schmugge, TJ. Jackson, C.L. Unkrich, T.O. Keefer, R. Parry, L.B. Bach, and S.A. Amer.
1994. Runoff simulation sensitivity to  remotely sensed initial soil water content. Water Resources Research. 30
(5):1393-1405.

Hernandez, M, S.N. Miller, D.C. Goodrich, B.F. Goff,  W.G. Kepner,  C.M. Edmonds, and K.B. Jones.  2000.
Modeling runoff response  to  land cover and rainfall spatial variability in semi-arid watersheds. Environmental
Monitoring and Assessment. 64:285-298.

Hernandez, M., W.G. Kepner, D.J. Semmens, D.W.  Ebert, D.C.  Goodrich, and  S.N. Miller. 2003. Integrating a
Landscape/Hydrologic Analysis for Watershed Assessment. In Proceedings of the  First Interagency Conference on
Research in the Watersheds, U.S. Department of Agriculture,  Agricultural Research Service, October 27-30, 2003,
pp. 461-466.

Michaud,  J.D., and S. Sorooshian. 1994. Comparison of simple versus complex distributed  runoff models on a
midsized semiarid watershed. Water Resources Research. 30 (3):593-605.

Miller, S.N., W.G. Kepner, M.H. Mehaffey, M. Hernandez, R.C.  Miller, D.C. Goodrich, F. Kim Devonald, D.T.
Heggem, and W.P. Miller.  2002. Integrated landscape assessment and hydrologic modeling for land cover change
analysis. Journal of the American Water Resources Association. Special Volume on Watershed Management and
Landscape Studies.

Miller, S.N., D.J. Semmens, R.C.  Miller, M. Hernandez, D.C. Goodrich, W.P. Miller, W.G. Kepner,  and D.W.
Ebert.  2002b.  GIS-based  Hydrologic  Modeling:  The  Automated Geospatial Watershed Assessment  Tool. In
Proceedings of the Second Federal Interagency Hydrologic Modeling Conference, Las Vegas, Nevada, July 28-
August 1, 2002. Available online: http://www.epa.gov/nerlesdl/land-sci/agwa/pdf/pubs/agwa-conference.pdf.
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    AnnAGNPS: Annualized Agricultural Nonpoint Source Pollution Model


Contact Information
Ronald L. Bingner
U.S. Department of Agriculture
Agricultural Research Service
National Sediment Laboratory
598 McElroy Drive
Oxford, MS 38655
(662) 232-2966
rbingnertgjmsa-oxford.ars.usda.gov
http://msa.ars.usda.gov/ms/oxford/nsl/AGNPS.html


Download Information
Availability: Nonproprietary
(required to register prior to download)
Cost: N/A


Model Overview/Abstract
AnnAGNPS  is a continuous simulation watershed-scale program developed based on the  single-event model
AGNPS. AnnAGNPS  simulates quantities of surface water, sediment,  nutrients, and pesticides leaving the land
areas and their subsequent travel through the watershed. Runoff quantities are based on runoff curve numbers while
sediment is determined by using the Revised Universal Soil Loss Equation (RUSLE).  Special components  are
included to handle concentrated sources of nutrients (feedlots and point sources), concentrated sediment sources
(gullies), and added water (irrigation).  Output is expressed  on an event basis for selected stream reaches and as
source accounting (contribution to outlet) from land or reach components over the simulation period. The model  can
be used to evaluate best management practices (BMPs).


Model Features
    •    Distributed, continuous simulation
    •    Point and nonpoint sources
    •    Source accounting


Model Areas Supported
Watershed              High or medium
Receiving Water         None
Ecological              None
Air                    None
Groundwater            Medium


Model Capabilities

Conceptual Basis
AnnAGNPS divides the watershed into homogenous drainage areas, which are then integrated together by simulated
rivers and  streams, routing the runoff and pollutants from each area downstream. The hydrology of the model is
based on simple water balance approach.
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Scientific Detail
The  model uses the SCS curve number technique to calculate the daily runoff and RUSLE 1.05 technology to
calculate daily sheet and rill erosion. The Hydro-geomorphic Universal Soil Loss Equation (HUSLE) is used for the
calculation of the sediment delivery ratio (yield from erosion divided by the amount delivered to the stream). The
instantaneous peak discharge of the runoff hydrograph is calculated using TR-55, which is then used to calculate the
time of concentration, Tc. The key processes and their details are given below:

    •   Climate - Climate data are generated using GEM and Complete_Climate
    •   Hydrology - Daily soil moisture balance
    •   Runoff-SCS curve number
    •   Potential evapotranspiration - Penman equation
    •   Subsurface flow - lateral subsurface flow using Darcy's equation or tile drain flow
    •   Rill and sheet erosion - RUSLE
    •   Sediment delivery - HUSLE
    •   Chemical routing - dissolved or adsorbed by mass balance approach


Model Framework
    •   Subwatershed or cell-based approach
    •   Simple one-dimensional channel routing
    •   GIS interface is used for watershed characterization and model parameterization


Scale

Spatial Scale
    •   One-dimensional grid or subwatershed overland
    •   One-dimensional channel network


Temporal Scale
    •   Daily


Assumptions
The climate generation module assumes that daily precipitation is independent of any precipitation on either the day
before or day after.  The RUSLE K and C factors are assumed to not vary significantly day-to-day and thus the
minimum timestep of 15 days used in RUSLE is assumed to be appropriate.
Model Strengths
AnnAGNPS is a distributed parameter, watershed scale model that is used for continuous simulations. AnnAGNPS
can be used to study the effect of BMPs (agricultural practices, ponds, grassed waterways, irrigation, tile drainage,
vegetative filter strips and riparian buffers).


Model Limitations
All runoff and associated sediment, nutrient, and pesticide loads for a single day are routed to the watershed outlet
before the next day simulation. There is no tracking of nutrients and pesticides attached to sediment deposited in
stream reaches from one day to the next. Point sources are limited to constant loading rates (water and nutrients) for
the entire simulation period. Spatially variable rainfall is not allowed.
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Application History
There have been few application studies of the model other than the model evaluation studies discussed in the next
section. Srivastava et al. (2002) conducted a study using AnnAGNPS and genetic algorithm of optimization of best
management practices. Baginska et al. (2003) applied AnnAGNPS and PEST model to predict nutrient export from
a small catchment in Australia and found that the accuracy of predictions was moderate.


Model Evaluation
In a model evaluation study, Yuan et al. (2001) found out that the model-predicted monthly sediment yield was in
close agreement (R2 = 0.7) with the actual observed sediment yield, but the short-term individual event predictions
were not acceptable. In another study, Yuan et  al.  (2003) found out  that AnnAGNPS predictions of monthly
loadings were poor though statistically not significantly different from observed values.


Model Inputs
    •  Watershed delineation, cell (subwatershed) boundaries, land slope, slope direction, and reach information -
       generated by TOPAGNPS and AGFLOW
    •  Daily precipitation, maximum and minimum temperature, dew point temperature,  sky cover, and wind
       speed - can be generated by the climate data generator, GEM
    •  Management information,  land characteristics, crop characteristics, field operation data, chemical operation
       data,  feedlots, and soil information - can be imported from RUSLE or NRCS sources
    •  If impoundment is  present,  then elevation-storage power  curve  coefficient and exponent;  elevation
       discharge coefficient and exponent; permanent pool stage; runoff event water volume; and incoming mass
       of sediment by particle size and its associated fall velocity


Users' Guide
Available online: http://sedlab.olemiss.edu/AGNPS.html


Technical Hardware/Software Requirements

Computer hardware:
    •  PC


Operating system:
    •  Windows 98/NT/2000 and XP


Programming language:
    •  ANSI FORTRAN 95


Runtime estimates:
    •  Minutes


Linkages Supported
Different tools or models that are linked to AnnAGNPS include TOPAZ for watershed delineation, Stream Network
Temperature Model (SNTEMP), Sediment Intrusion  &  Dissolved Oxygen Model (SIDO), Conservation Channel
Evolution  and Pollutant Transport System Model (CONCEPTS), and  Stream Network Watershed  Scale Model
(CCHE1D). NRCS plans to revise HU/WQ to work with AnnAGNPS.


Related  Systems
AGNPS is the predecessor of AnnAGNPS.
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Sensitivity/Uncertainty/Calibration
Not available


Model Interface Capabilities
    •   Window GUI for editing input
    •   GIS interface in Arc View and ArcGIS for preprocessing input data


References
Baginska, B.,  W. Milne-Home, and P. S.  Cornish. Modelling  nutrient transport in Currency Creek, NSW with
AnnAGNPS and PEST. Environ. Model. & Software. 18:801-808.

Bingner,   R.    L.,   F.D.   Theurer,  R.G.Cronshey,   R.W.Darden.  2001.   AGNPS  2001   Web   Site.
http://www.sedlab.oleniiss.edu/AGNPS.html.

Srivastava, P., J. M. Hamlett, P. D. Robillard, and R. L. Day. 2002. Watershed optimization of best management
practices using AnnAGNPS and a genetic algorithm. Water Resour. Res. 38(3):1021.

Yuan, Y., Bingner, R. L.,  and Rebich, R.  A.  2001. Evaluation of  AnnAGNPS on Mississippi Delta MSEA
Watersheds. Trans. ASAE. 44(5): 1183-1190.

Yuan, Y., Bingner, R. L., and Rebich, R.  A.  2003. Evaluation of AnnAGNPS nitrogen loading in an agricultural
watershed. J AWRA. 39(2):457-466.
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                                            AQUATOX


Contact Information
Marjorie Wellman
U.S. Environmental Protection Agency
Office of Water
Ariel Rios Building
1200 Pennsylvania Avenue, N. W.
Washington, DC 20460
(202) 566-0407
wellman. marj orie(g),epa. gov
http ://www. epa. gov/waterscience/models/aquatox/about. html


Download Information
Availability: Nonproprietary
Cost: N/A


Model Overview/Abstract
AQUATOX simulates multiple environmental stressors (including nutrients, organic loadings and chemicals, and
temperature) and their effects on the algal, macrophyte, invertebrate, and fish communities. Therefore, AQUATOX
can help identify and understand the  cause and effect relationships between chemical water quality, the physical
environment,  and  aquatic  life. AQUATOX  can  represent a variety of aquatic ecosystems spatially, including
vertically stratified lakes, reservoirs and ponds, and rivers and streams.


Model Features
    •   Evaluates  which of several stressors is causing observed biological impairment
    •   Predicts effects of pesticides and other toxic substances on aquatic life
    •   Evaluates  potential ecosystem responses to invasive species
    •   Explores how changes in land use or agricultural practices in a watershed might affect aquatic life, by using
        the new linkage to BASINS
    •   Compares differences in biological responses to control alternatives
    •   Develops targets for nutrients in lakes and reservoirs with nuisance algal blooms
    •   Estimates  time to recovery of fish or invertebrate communities after reducing pollutant loads
    •   Calculates bioaccumulation factors for organic toxic chemicals
    •   Estimates  how long before tissue levels of toxic organics in fish will return to safe levels following removal
        of contaminated sediments
    •   Has a large increase in the number of biotic state variables, with two representatives for each taxonomic
        group or ecologic guild
    •   Macrophyte category includes bryophytes
    •   Includes a multi-age fish category with up to 15 age classes for age-dependent bioaccumulation and limited
        population modeling
    •   Simulates  maximum of  20  toxicants,  with the capability  for modeling  daughter  products due  to
        biotransformations
    •   Disaggregates stream habitats into riffle, run, and pool
    •   Includes mechanistic current- and stress-induced sloughing, light extinction, and accumulation of detritus
        in periphyton
    •   Includes macrophyte breakage due to currents
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        Computes chlorophyll a for periphyton and bryophytes, as well as for phytoplankton
        Enters and tracks fish biomass in g/m2
        Includes entrainment and washout of animals, including fish, during high flow
        Has options of computing respiration and maximum consumption in fish as functions of mean individual
        weight, using allometric parameters from the Wisconsin Bioenergetics Model
        Includes density-dependent respiration in fish
        Fish spawning can occur on user specified dates as an alternative to temperature-cued spawning
        Includes detailed elimination of toxicants from biota
        Includes settling and erosional velocities for inorganic sediments as user-supplied parameters
        Includes uncertainty analysis that covers all parameters  and loadings
        Provides biotic risk graphs as an alternative means of portraying probabilistic results
        Outputs limitation factors for photosynthesis along with the biotic rates
        Extends BASINS, providing linkages to GIS data, and HSPF and SWAT simulations
Model Areas Supported
Watershed
Receiving Water
Ecological
Air
Groundwater
None
Medium
High
None
None
Model Capabilities

Conceptual Basis
AQUATOX predicts the fate of various pollutants, such as nutrients and organic toxicants, and their effects on the
ecosystem, including fish,  invertebrates,  and aquatic plants (Figure  1). It  simultaneously computes  important
chemical and biological processes over time. AQUATOX can predict not only the fate of chemicals in aquatic
ecosystems but also their direct and indirect effects on the resident organisms.

                                                       IK AI.H' Uu.X
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Scientific Detail
AQUATOX uses differential equations to represent changing values of state variables, normally with a reporting
timestep of one day. AQUATOX uses fourth- and fifth-order Runge-Kutta integration routines with adaptive step
size to solve the differential equations. The routine uses the fifth-order solution to determine the error associated
with the fourth-order solution; it decreases the step size (often to 15 minutes or less) when rapid changes occur and
increases the step size when there are slow changes, such as in winter. However, the step size is constrained to a
maximum of one day so that daily pollutant loadings are always detected. The reporting step, on the other hand, can
be as long as 99 days or as short as 0.1 day; the results are integrated to obtain the desired reporting time period.

The process equations contain another class of input variables—the parameters or coefficients that allow the user to
specify  key process  characteristics.  For example,  the  maximum consumption rate is  a critical  parameter
characterizing  various consumers. AQUATOX is a mechanistic model with many parameters;  however, default
values are available so that the analyst has to be concerned with only those parameters necessary for a specific risk
analysis, such as characterization of a new chemical.

The system being modeled is  characterized by site constants,  such as mean and maximum depths. At present, one
can model small lakes, reservoirs, streams, small rivers, and ponds—and even enclosures and tanks.


Model Framework
It uses a waterbody ecosystem compartment framework to describe interactions between biotic and abiotic system
components.

The fate portion of the model,  which applies especially to organic toxicants, includes partitioning among  organisms,
suspended and sedimented detritus,  suspended and  sedimented  inorganic sediments, and  water; volatilization;
hydrolysis; photolysis; ionization; and microbial degradation. The effects portion of the model includes chronic and
acute  toxicity  to the various  organisms modeled; and  indirect effects such as release of grazing and predation
pressure, increase in detritus and recycling of nutrients  from killed organisms, dissolved oxygen sag due to increased
decomposition, and loss of food base for animals.


Scale

Spatial Scale
    •   One-dimensional stream
    •   Two-box for reservoir, lake, and pond


Temporal Scale
    •   Daily


Assumptions
Aquatic system is considered to be a well-mixed condition. The model uses a two-box (epilimnion and hypolimnion)
approach for the lake.


Model Strengths
AQUATOX is an ecosystem model that predicts the fate of nutrients and organic chemicals in water bodies as well
as their direct and indirect effects on the resident organisms. Most water quality models predict only concentrations
of pollutants in water; they do not project effects of pollutants on organisms.


Model Limitations
AQUATOX represents the  aquatic ecosystem by simulating the changing concentrations (in mg/L or g/m3) of
organisms, nutrients, chemicals, and sediments in a unit volume of water. It  differs from population models, which
represent the changes in numbers of individuals modeling individual species at risk and modeling fishing pressure
and other age-  or size-specific  aspects.
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Application History
Validation studies using AQUATOX:

    •   Nutrient analysis on Onondaga Lake, New York
        (http://www.epa.gov/waterscience/models/aquatox/validation/onondaga.pdf)
    •   Nutrient analysis of the Coralville Reservoir, Iowa
        (http://www.epa.gov/waterscience/models/aquatox/validation/coralville.pdf)
    •   Bioaccumulation of PCBs in Lake Ontario
        (http ://www. epa. gov/waterscience/models/aquatox/validation/ontario .pdf)
    •   Simulation of periphyton in Walker Branch, Tennessee
        (http://www.epa.gov/waterscience/models/aquatox/periphvtonvalid.pdf)


Model Evaluation
The model and documentation have undergone successful peer review by an external panel convened by the U.S.
Environmental Protection Agency.


Model Inputs
    •   Loadings to the waterbody
    •   General site characteristics
    •   Chemical characteristics of any organic toxicant
    •   Biological characteristics of the plants and animals.

AQUATOX  comes bundled with data libraries that  provide default data.  These data libraries are  of particular
importance for the biological data, which are probably the most difficult for a user to obtain.


Users' Guide
Available online: http://www.epa.gov/waterscience/models/aquatox/users/user.pdf
Technical Hardware/Software Requirements

Computer hardware:
    •   PC
Operating system:
    •   Graphical User Interface


Programming language:
    •   Object-oriented Pascal using the Delphi programming system for Windows


Runtime estimates:
    •   Seconds to minutes
Linkages Supported
BASINS
Related Systems
None
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Sensitivity/Uncertainty/Calibration
AQUATOX provides probabilistic modeling capability to consider the implications of uncertainty in the modeling
analyses by allowing the user to specify the types of distributions and key statistics for any and all input variables.
Quantitative uncertainty analysis is based on a Monte Carlo simulation.


Model Interface Capabilities
    •   Pre- and postprocessors
    •   Data display tools


References
U.S. Environmental Protection Agency. 2004.  Users Manual for AQUATOX (Release 2): Modeling Environmental
Fate and Ecological Effects in Aquatic Ecosystems Volume 1. EPA-823-R-04-001.  (Computer program manual).
U.S. Environmental Protection Agency, Office of Water, Washington, DC.

Park, R. A., and J.  S. Clough. 2004. Aquatox (Release 2): Modeling Environmental Fate and Ecological Effects in
Aquatic Ecosystems Volume 2: Technical Documentation. U.S. Environmental Protection Agency, Office of Water,
Washington, DC.

U.S. Environmental Protection Agency.  2000. AQUATOX for Windows: A Modular Fate and Effects Model for
Aquatic Ecosystems-Volume 3: Model Validation Reports. U.S. Environmental Protection Agency, Office of Water,
Washington, DC.
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 BASINS: Better Assessment Science Integrating point and Nonpoint Sources


Contact Information
U.S. Environmental Protection Agency (Mailcode - 4305T)
Office of Science and Technology
Standards and Health Protection Division
Modeling and Information Technology Team
1200 Pennsylvania Ave., NW
Washington, DC 20460
basins(g),epa.gov


Download Information
Availability: Nonproprietary
http://www.epa.gov/waterscience/basins/index.html
Cost: N/A


Model Overview/Abstract
BASINS was developed by the EPA's Office of Water to support  environmental and ecological studies in a
watershed context. BASINS, a multipurpose environmental analysis system designed for use by regional, state, and
local agencies in performing watershed and water quality-based studies,  was originally introduced in 1996 with
subsequent releases in 1998 and 2001. BASINS works with a geographic information system (GIS) framework and
consists of:  (1) national databases (2) assessment tools (3) a watershed delineation tool (4) classification utilities (5)
characterization reports (6) watershed loading and transport models, HSPF and Soil and Water Assessment Tool,
(SWAT); (7) a simplified  GIS-based model, PLOAD, that estimates annual average nonpoint  loads;  (8)  the
Automated Geospatial Watershed Assessment (AGWA) tool, a GIS-based hydrologic modeling tool; and (9) model
calibration tool, Parameter Estimation (PEST) tool. The system provides a user-friendly interface to conduct simple
watershed-level screening analysis  or detailed water quality modeling  studies. The interface  also helps the user to
easily create the input files for various models.


Model Features
    •   User-friendly interface
    •   Flexibility in use from the  simple watershed-level screening analysis to detailed water quality modeling
    •   Easy access to required GIS data layers for locations within the United States
    •   Linkage between GIS and the selected popular watershed and water quality models


Model Areas Supported
Watershed             High
Receiving Water        High
Ecological             Medium
Air                   None
Groundwater           Medium
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Model Capabilities

Conceptual Basis
BASINS is  a GIS-based system that  integrates a suite  of watershed and water quality models with different
approaches.


Scientific Detail
BASINS is a freely available multipurpose Arc View desktop  environmental analysis system for use by regional,
state, and local agencies in performing watershed and water quality-based studies. Many states and local agencies
are  moving  toward a  focused, watershed-based approach.  The BASINS  system is configured  to  support
environmental and ecological studies in a watershed context. The system is designed to be flexible but support a
variety of scales using tools that range from simple to sophisticated.

BASINS also was conceived as a system for supporting the development of total maximum daily loads (TMDLs), as
defined in Section 303(d) of the Federal Clean Water Act. A TMDL is the  sum of the allowable loads of a particular
pollutant from all contributing point and nonpoint sources. The calculation must include a margin of safety (MOS)
to ensure that the waterbody can be used for the purposes the state has  designated (i.e., drinking water, fishing,
swimming, etc.). Developing  TMDLs requires a watershed-based point and nonpoint source analysis for a variety of
pollutants. It also lets the modeler test different best management options for the  impaired waterbody.

Traditional approaches to watershed-based assessments typically involve many separate steps for preparing data,
summarizing information, developing  maps and tables, and applying and interpreting  models. BASINS makes
watershed and water quality  studies easier by bringing key data and analytical components together on a user's
desktop. Using the now-familiar Windows environment, an analyst can quickly  access national environmental data,
apply some  assessment and analysis tools, run several calculations and  processes through hundreds of nonpoint
source  loadings, and obtain results in the form of maps, charts, graphs, and reports from a choice of water quality
models in a matter of minutes.


Model Framework
BASINS consists of a  GIS-based framework that links to environmental databases, characterization tools, and
watershed models that simulate watershed and subwatershed processes with 1-D  streams.

    •   BASINS is  based on the Arc View GIS interface.
    •   BASINS includes many Arc View modular extensions
    •   BASINS integrates environmental data and watershed and water quality models into a coherent system for
        assisting in TMDL development and solving environmental problems.

The following components are new in BASINS 3.x:
    •   Extensions with an Extension Manager
    •   Web-based online help


Scale

Spatial Scale
    •   Watershed scale
    •   One-dimensional waterbody


Temporal Scale
    •   Different models in the BASINS suite have  different temporal  scales—HSPF: user-defined timestep,
        typically hourly, continuous simulation from days to years; SWAT: daily  timestep, continuous simulation
        for months to years; PLOAD: Export coefficient model, annual; and KINEROS: single-storm event, part of
        AGWA, variable timestep typically in minutes
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Assumptions
    •   Uses a lumped approach for the hydrologic response unit


Model Strengths
    •   Includes a large dataset for the nation
    •   Includes more than one watershed or water quality model from which to choose
    •   Has associated automatic downloading of data from Internet
    •   Has good customer support and e-mail listing service


Model Limitations
    •   Requires a large set of GIS data, making it difficult to setup the model for locations outside of the United
        States
    •   Requires proprietary software: Arc View 3.x, and the Spatial Analyst for grid operation
    •   May require training to use the advanced modeling options


Application History
Previous versions of BASINS have been applied to many TMDL studies across the United States. The individual
models within the model suit like SWAT and HSPF have been used extensively for watershed and water quality
studies.


Model Evaluation
BASINS system and most of its components have been used for many TMDL developments. There are many peer-
reviewed publications available for the system and individual models.


Model Inputs
The BASINS system requires  many GIS data layers with specific attributes combined with them. For locations
within the United States, all  the essential datasets can be downloaded from EPA's Web  site based on 8-digit
watershed or HUC in the lower 48 states, Alaska, Hawaii, and Puerto Rico  with the U.S. Virgin Islands. The input
requirements for individual watershed and water quality models available in the system vary among the models. For
example, the HSPF model requires hourly precipitation depths, while SWAT requires  only daily precipitation
depths.


Users' Guide
Available online: http://www.epa.gov/waterscience/basins/bsnsdocs.html
Technical Hardware/Software Requirements

Computer hardware:
    •   PC
Operating system:
    •   Windows XP/2000/NT/98
Programming language:
    •   BASINS system and PLOAD are developed in Arc View 3.X.
    •   Models including HSPF, SWAT, and KINEROS are in FORTRAN
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Runtime estimates:
    •   Minutes


Linkages Supported
BASINS system is a suite of tools and models linked together.

Models
    •   Updated the Hydrological Simulation Program-Fortran  (HSPF) to version 12 and created a Windows
        interface for the HSPF model (WinHSPF) to replace the NonPoint Source Model (NPSM) in the previous
        versions of BASINS.
    •   The  Automated Geospatial Watershed Assessment (AGWA)  tool features the USDA-ARS models
        KINEROS and SWAT.
    •   The Kinematic Runoff and Erosion Model (KINEROS)
    •   Soil  and  Water Assessment Tool  (SWAT),  developed by the USDA Agriculture  Research  Service.
        BASINS uses the updated SWAT2000 model.
    •   A model called PLOAD, developed by CH2M-Hill, which uses export coefficients to estimate watershed
        loading. Rosgen's Bank Erosion Hazard Index has been incorporated into PLOAD as PLOAD-BEHI
    •   AQUATOX  receives and automatically formats output from HPSF or  SWAT in  order to integrate
        watershed analysis with the likely effects on the aquatic biota in receiving waters.


Related Systems
Watershed Characterization System (WCS) (http://wcs.tetratech-ffx.com). TMDL Modeling Toolbox
(http ://www. epa. gov/athens/wwqtsc/html/tools. html)


Sensitivity/Uncertainty/Calibration
The new Parameter Estimation (PEST) tool in WinHSPF automates the model calibration process and allows users
to quantify the uncertainty associated with specific model predictions. This tool can also be used for uncertainty
analysis, such as Monte Carlo Analysis.


Model Interface Capabilities
    •   Customized Arc View 3.x interface with individual extensions organized in the following categories:
        Assess, Data, Delineate, Models, Reports, and Utilities
    •   A scenario generator, GenScn, developed by USGS, that allows users to manage, visualize, analyze, and
        compare results from WinHSPF or SWAT simulations
    •   A Web data extraction tool that dynamically downloads GIS data and databases from the BASINS Web site
        and a variety of other sources
    •   A tool that automatically checks all components of the BASINS application and the last update
    •   Automatic watershed delineation tools based on DEM GRID
    •   Updated manual delineation tools based on Arc View's dynamic segmentation process
    •   A GRID projector, which requires Spatial Analyst extension
    •   An FTP process for downloading NHD layers from USGS and importing, then projecting them directly into
        a BASINS project window
    •   A tool to archive and restore BASINS projects


References
Lahlou, M., L. Shoemaker, S. Choudhury, R. Elmer, A. Hu, H. Manguerra and A. Parker.  1998. Better Assessment
Science Integrating Point and Nonpoint Sources—BASINS Version 1.0. EPA-823-B-98-006. (Computer program
manual). U.S. Environmental Protection Agency, Office of Water, Washington, DC.

U.S. Environmental Protection Agency. 2004. Better Assessment  Science Integrating Point and Nonpoint Sources
Release 3.1.  EPA/823/C-04/004.  (Computer program manual). U.S.  Environmental Protection Agency, Office  of
Water, Washington, DC.
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         CAEDYM: Computational Aquatic Ecosystem Dynamics Model


Contact Information
David Horn
University of Western Australia
Centre for Water Research
35 Stirling Highway
Crawley
Western Australia
Australia 6009
+61 8 9380 1684
horn@cwr.uwa.edu.au
www.cwr.uwa.edu.au


Download Information
Availability: Nonproprietary
www.cwr.uwa.edu.au/~ttfadmin/model/caedym
Cost: N/A


Model Overview/Abstract
The Computational Aquatic Ecosystem Dynamics Model (CAEDYM) is a comprehensive aquatic ecological model
that is based on the nutrient-phytoplankton-zooplankton food chain relationship. The state variables of CAEDYM
include carbon, oxygen, silica, inorganic paniculate, and other biological factors. CAEDYM can be linked with
several hydrodynamic models, such as DYRESM  and ELCOM, to describe one-,  two-,  and three-dimensional
processes of primary production, secondary production, nutrient and metal cycling, and oxygen dynamics and the
movement of sediment.


Model Features
    •  Phytoplankton: up to seven groups
    •  Dissolved oxygen, biochemical oxygen demand ("fast" and "slow")
    •  Nutrients (NH4, NO3, PO4, TP, TN and internal phytoplankton N, P and C)
    •  Suspended solids: two groups
    •  Zooplankton: up to five groups
    •  Fish: up to nine groups including jellyfish and seagrasses/macrophytes
    •  Macroalgae
    •  Macroinvertebrates (bivalves, polychaetes and crustacean grazers)
    •  pH
    •  Metals: iron, manganese and aluminum


Model Areas Supported
Watershed              None
Receiving Water        Medium
Ecological              High
Air                   None
Groundwater           None
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Model Capabilities

Conceptual Basis
The waterbody is conceptualized as a network of grid points (finite difference).


Scientific Detail
CAEDYM is a detailed aquatic ecological model that simulates the nutrients, phytoplankton, zooplankton, fish, and
benthic habitat. The model requires external hydrodynamic models to provide temperature, salinity, and transport
driving forces. CAEDYM  usually runs  at the same timestep as the hydrodynamic models. The  state  variables
include  dissolved oxygen, inorganic  nutrients, dissolved  organic nutrients, paniculate organic  nutrients, and
inorganic suspended solids  in both the water column and sediment layer. The water column variables also include
pH, color, one group of bacteria,  seven  groups of algae, five groups of zooplankton, one group of jellyfish, five
groups of fish, one  group  of pathogen,  four groups of macroalgae, one group of seagrass, and three groups of
invertebrates.


Model Framework
    •   One-dimensional vertical
    •   One-dimensional longitudinal
    •   Two-dimensional longitudinal-vertical
    •   Three-dimensional
    •   Reservoir, lake, estuary, river,  floodplain


Scale

Spatial Scale
    •   One-, two-, or three-dimensional


Temporal Scale
    •   User-defined timestep


Assumptions
Aquatic ecological dynamics can be described with the ordinary differential equations.


Model Strengths
    •   Detailed aquatic ecology,  strong ecological modeling capability
    •   Flexible structure


Model Limitations
    •   No sediment diagenesis


Application History
CAEDYM is used in 59 countries around the world.


Model Evaluation
Not available


Model Inputs
    •   Initial concentrations of state variables
                                                 142

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    •  Inflows and concentrations in inflows and over forcing regions
    •  Parameter values
    •  Other data may be required by the hydrodynamic driver (DYRESM or ELCOM), e.g., meteorological
       forcing data


Users' Guide
Computational Aquatic Ecosystem Dynamics Model CAEDYM v2.1 Science Manual
Computational Aquatic Ecosystem Dynamics Model CAEDYM v2.1 User Manual
Available online: http://www.cwr.uwa.edu.au/~ttfadmin/model/caedvm/


Technical Hardware/Software Requirements

Computer hardware:
    •  PC


Operating system:
    •  Windows 95/98/NT, Linux, DEC Unix


Programming language:
    •  FORTRAN 95


Runtime estimates:
    •  Minutes to hours


Linkages Supported
CAEDYM can be linked with the following hydrodynamic models:
    •  DYRESM (one-dimensional vertical for deep lakes and reservoirs)
    •  DYRISM (Quasi-two-dimensional Lagrangian for rivers and floodplains)
    •  ELCOM-2D (two-dimensional laterally averaged for narrow lakes and reservoirs)
    •  ELCOM (three-dimensional for any waterbody)


Related Systems
CE-QUAL-Rl, EFDC, CE-QUAL-ICM, WASP/EUTRO, CE-QUAL-RIV1, CE-QUAL-W2


Sensitivity/Uncertainty/Calibration
Not available


Model Interface Capabilities
    •  Graphic Interface written with Java


References
Hipsey, M.R., J.R. Romero, J.P. Antenucci, and D.P. Hamilton. 2004. Computational Aquatic Ecosystem Dynamics
Model CAEDYM v2. (Computer program manual). Centre for Water Research, The University of Western Australia.

Romero, J.R., M.R. Hipsey, J.P. Antenucci, and D.P. Hamilton. 2004. Computational Aquatic Ecosystem Dynamics
Model CAEDYM v2.1. (Science manual). Centre for Water Research, The University of Western Australia
                                              143

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                                            CCHE1D


Contact Information
Dalmo A. Vieira
National Center for Computational Hydroscience and Engineering
University of Mississippi
School of Engineering
University, MS 38677
(662) 915-6562
dalmo(g),ncche.olemiss.edu
http://www.ncche.olemiss.edu/ccheld/index.html


Download Information
Availability: Nonproprietary (for beta testing program)
Cost: N/A


Model Overview/Abstract
The CCHE1D model is a general one-dimensional model that simulates unsteady flows and sedimentation processes
in channel networks, including bed aggradation and degradation, bed material composition (hydraulic sorting and
armoring), bank erosion, and the resulting channel morphologic changes.

CCHE1D uses a  watershed-based  approach that provides straightforward integration with existing watershed
processes (rainfall-runoff and field  erosion) models to produce  estimations of sediment loads and morphological
changes in channel networks. CCHE1D has a GIS-based graphical interface that provides support for automated
spatial analysis, channel network digitizing, digital mapping, and visualization of modeling results.


Model Features
    •   Unsteady, one-dimensional channel network flow simulation
    •   Nonequilibrium,  nonuniform sediment transport and channel morphology modeling
    •   Arc View-based graphical user interface (GUI)
    •   Channel network and subwatershed extraction
    •   Channel networks digitizing
    •   Mesh generation
    •   Data management
    •   Interface to watershed modeling programs.


Model Areas Supported
Watershed              Medium
Receiving Water         Medium
Ecological              None
Air                    None
Groundwater            None
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Model Capabilities

Conceptual Basis
The river channels are conceptualized as a one-dimensional channel network.


Scientific Detail
The governing equations for the one-dimensional flow are the St. Venant equations, which describe the conservation
of mass and momentum in the channel network. Preissmann's implicit scheme is applied to  solve the governing
equations numerically. The sediment transport component simulates the nonequilibrium transport of nonuniform
sediment with bed load, suspended load, and wash load. The Preissmann's implicit scheme is also applied to solve
the governing equation of sediment transport. Several empirical equations such as the sediment transport capacity,
bed-material porosity, mixing layer thickness, and settling velocities of sediment particles are  used to simulate the
sediment transport.


Model Framework
    •   Horizontal one-dimension model
    •   Channel network


Scale

Spatial Scale
    •   One-dimensional channel network


Temporal Scale
    •   User-defined timestep, typically minutes.


Assumptions
    •   Laterally and vertically averaged


Model Strengths
The  model is able to simulate unsteady flow, including  hydraulic structures, and various  sediment processes,
including bed aggradation and degradation,  bed material  composition (hydraulic sorting and  armoring), bank
erosion, and the resulting channel morphologic changes. The model also provides interfaces and preprocessing tools
for preparing input data.


Model Limitations
    •   Only a single outlet is allowed in the dendritic channel networks.
    •   Flow must be primarily subcritical in all reaches. Local supercritical and transcritical flows without
        hydraulic jumps in isolated cross sections are handled through the hybrid dynamic/diffusive wave model.
    •   Tidal flow conditions are not tested.
    •   The model cannot be applied to dam-break flows.


Application History
Applications examples: East Fork River, Wyoming; Danjiangkou Reservoir,  China;  Goodwin Creek Watershed,
Mississippi


Model Evaluation
Application and test of CCHE1D  can be found in various technical reports, journals,  and conference papers from
http://www.ncche.olemiss.edu/ccheld/ccheld  publications.html.
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Model Inputs
    •  Geometric data, including cross section, reach length, channel roughness, and channel junctions
    •  Inflow and outflow
    •  Sediment properties, inflow sediment data, bed material data, bank material data
    •  Hydraulic structure data, including bridge crossing, culverts, drop structures, and measuring flumes
    •  Watershed data
Users' Guide
Available online: http://www.ncche.olemiss.edu/ccheId/ccheId documents.html


Technical Hardware/Software Requirements

Computer hardware:
    •  PC-Intel or compatible
Operating system:
    •  Windows95 or newer
Programming language:
    •  FORTRAN, C, and Avenue


Runtime estimates:
Linkages Supported
    •  Linked to TOPAZ for spatial analysis
    •  Linked to AGNPS and SWAT for watershed processes


Related Systems
None


Sensitivity/Uncertainty/Calibration
Not available


Model Interface Capabilities
    •  ArcViewS.x as the GUI


References
Wu, W.M, D.A. Vieira, 2002, One-Dimensional Channel Network Model CCHE1D version 3.0, Technical Manual,
University of Mississippi, University, MS

Vieira, D.A., W.M Wu. 2002.  Users Manual for One-Dimensional Channel Network Model CCHE1D version 3.0,
(Computer program manual). University of Mississippi, University, MS
                                              146

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                                 CE-QUAL-ICM/TOXI
Contact Information
Carl F. Cerco
U.S. Army Corps of Engineers
Engineer Research and Development Center
Waterways Experiment Station
Environmental Laboratory
ATTN: CEERD-EP-W
3 909 Halls Ferry Road
Vicksburg, MS 39180
(601)634-4207
cercoc(@,wes.army.mil
http://www.wes.army.mil/el/elmodels


Download Information
Availability: Nonproprietary
Cost: N/A


Model Overview/Abstract
The CE-QUAL-ICM water quality model was initially developed as one component of a model package employed
to study eutrophication processes in Chesapeake Bay. The ICM/TOXI model is the toxic chemical model and has
routines from EPA's WASP (Water Quality Analysis Simulation Program).


Model Features
    •   Water quality modeling
    •   Toxics model
    •   Eutrophication
    •   Sediment diagenesis model


Model Areas Supported
Watershed             None
Receiving Water        High
Ecological             Low
Air                   None
Groundwater           None


Model Capabilities

Conceptual Basis
There are two distinctly different development pathways to ICM: a eutrophication model (ICM) and an organic
chemical model (ICM/TOXI). The model employs an unstructured grid system, which facilitates linkage to a variety
of hydrodynamic models.
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Scientific Detail
    •   ICM stands for "integrated compartment  model,"  which is analogous to  the  finite-volume  numerical
        method. The model computes constituent concentrations resulting from transport and transformations in
        well-mixed cells that can be arranged in arbitrary one-, two-, or three-dimensional configurations. Thus, the
        model employs an unstructured grid system.
    •   The release version of the eutrophication model computes 22  state variables, including physical properties;
        multiple forms of algae, carbon, nitrogen, phosphorus, and silica; and dissolved oxygen. Recently, two size
        classes of zooplankton, two benthos compartments (deposit feeders and filter feeders), submerged aquatic
        vegetation (roots and shoots biomass), epiphytes,  and benthic algae were added, although this  version of
        the code is not generally released to the public.
    •   Each state variable may be individually activated or deactivated.
    •   One significant feature of ICM, eutrophication version, is a diagenetic sediment submodel. The  sub-model
        interactively predicts sediment-water  oxygen and  nutrient  fluxes.  Alternatively, these fluxes may  be
        specified based on observations.
    •   The ICM/TOXI model resulted from incorporating the toxic chemical routines from EPA's WASP (Water
        Quality Analysis  Simulation Program) model into  the transport code for ICM, incorporating a more
        detailed benthic sediment model, and enhancing linkages to sediment transport models.
    •   ICM/TOXI includes physical processes, such as sorption to DOC and three solid classes, volatilization, and
        sedimentation. It also includes chemical processes  such as ionization,  hydrolysis, photolysis, oxidation, and
        biodegradation.
    •   ICM/TOXI can simulate temperature, salinity, three  solids classes, and three  chemicals (total chemical for
        organic chemicals and trace metals). Each species  can exist in five phases (water, DOC-sorbed, and sorbed
        to three solids types) via local equilibrium partitioning.


Model Framework
 The model consists of a main program, an INCLUDE file,  and subroutines. Both the main program and subroutines
 perform read and write operations on numerous input and output files. The model does not compute hydrodynamics.
 Flows, diffusion coefficients, and volumes must be specified externally  and  read into the model. Hydrodynamics
 may be specified in binary or ASCII format and may be obtained from a hydrodynamics model such as the CH3D-
 WESorEFDC.


Scale

Spatial Scale
    •   One-, two-, or three-dimensional


Temporal Scale
    •   User-defined timestep. The  timestep may be varied  through the auto-stepping option or at discrete, user-
        specified intervals.


Assumptions
The model assumes that the dynamics of each physical, chemical, and biological component can be described by the
principle of conservation of mass.


Model Strengths
    •   The  model  has a  predictive diagenetic sediment  submodel that interactively  predicts sediment-water
        oxygen and nutrient fluxes.
    •   The ICM/TOXI model has toxic chemical routines, which further enhance linkage with sediment transport
        models.
                                                  148

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Model Limitations
    •   The model does not compute hydrodynamics. Flows, diffusion coefficients, and volumes must be specified
        externally and read into the model.
    •   The user must provide processors,  which prepare input files and process output for interpretation and
        presentation.


Application History
The ICM eutrophication model has been applied to a variety of sites, including Chesapeake Bay, Inland Bays of
Delaware, New York Bight, Newark Bay, New York-New Jersey Harbors and Estuaries, Lower Green Bay, Los
Angeles-Long Beach Harbors, Cache River wetland, San Juan Bay and Estuaries, Florida Bay, and Lower St. Johns
River (on-going).

The WASP toxic chemical model on which ICM/TOXI is based has been applied to a wide variety of sites. CE-
QUAL-ICM also has been linked to the CH3D-WES and EFDC hydrodynamic models.


Model Evaluation
Not available


Model Inputs
    •   Initial conditions
    •   Time sequences of boundary conditions (inputs from watershed sources and discharges)
    •   Reservoir geometry
    •   Physical coefficients
    •   Biological and chemical reaction rates
    •   Time sequences of meteorological data used to compute temperature.


Users' Guide
Available online: http://www.wes.army.mil/el/elpubs/pdf/trel95-15.pdf


Technical Hardware/Software Requirements

Computer hardware:
    •   PC


Operating system:
    •   PC-DOS. Operates  on a variety of platforms,  including 486 PC, Silicon Graphics and Hewlett Packard
        workstations,  and Cray Y-MP and C-90 mainframes


Programming language:
    •   FORTRAN 77


Runtime estimates:
    •   Minutes to hours


Linkages Supported
 CH3D-WES, EFDC
                                               149

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Related Systems
 Surface Water Modeling System (SMS)


Sensitivity/Uncertainty/Calibration
Highly accurate for simulation of reservoir systems with adequate monitoring data and application experience.


Model Interface Capabilities
Not available


References
Creco, C.F. 1995. Simulation of trends in Chesapeake Bay Eutrophication. Journal of Environmental Engineering.
121(4):298-310.

Cerco, C.F.,  and T.  Cole. 1993.  Three-dimensional eutrophication model  of Chesapeake  Bay.  Journal  of
Environmental Engineering. (119): 1006-1025.

Cerco, C.F., and T. Cole. 1994. Three-dimensional eutrophication model of Chesapeake Bay. Technical Report EL-
94-4. US Army Corps of Engineers Water Experiment Station, Vicksburg, MS.

Cerco, C.F., and T. Cole.  1995. User's Guide to the CE-QUAL-ICM Three-dimensional eutrophication model,
release  version  1.0. Technical Report EL-95-15.  US Army  Corps of  Engineers  Water  Experiment  Station,
Vicksburg, MS.

DiToro, D.M., and J.F. Fitzpatrick (Hydroqual, Inc.). 1993. Chesapeake Bay sediment flux model. Contact Report
EL-93-2. Prepared for EPA Chesapeake Bay Program, US.  Army Engineers District, Baltimore, MD, and US. Army
Engineer Waterways Exp. Station by Hydroqual, Inc.

Mark, D., B. Bunch, and N. Scheffner. 1992. Combined hydrodynamic and water quality modeling of Lower Green
Bay. Miscellaneous Paper W-92-3.  In Proceedings of Water Quality '92 9th Seminar, Environmental  Laboratory,
Army Engineers Waterways Experiment Station, Vicksburg, MS,  pp 226-233.
                                                 150

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                                        CE-QUAL-R1


Contact Information
Dorothy H. Tillman
Environmental Laboratory
U.S. Army Corps of Engineers
Engineer Research and Development Center
Waterways Experiment Station
3 909 Halls Ferry Road
Vicksburg, MS 39180
(601)634-3670
tillmad(5),we s. army. mil
http ://www. wes.army. mil/el/elmodels/index. html#wqmodels


Download Information
Availability: Nonproprietary download currently for U.S. Army Corps of Engineers use only
Cost: N/A


Model Overview/Abstract
CE-QUAL-Rl is a water quality model that describes the time-variable vertical distribution of 27 water quality
variables in reservoirs. In addition, 11 variables associated  in the  sediment can be modeled. CE-QUAL-Rl is
spatially one-dimensional and horizontally averaged; temperature and concentration gradients are computed only in
the vertical direction. The reservoir is  conceptualized as a vertical sequence of horizontal layers in which thermal
energy and materials are uniformly distributed in each layer. The mathematical structure of the model is based on
horizontal layers whose thickness depends on the  balance of inflowing and outflowing waters. Variable layer
thicknesses permit accurate mass balancing during periods of inflow and outflow.


Model Features
    •   Temperature
    •   Dissolved oxygen
    •   Nutrients
    •   Metals
    •   Algaes
    •   Macrophytes
    •   Fish
    •   pH, alkalinity
    •   Coliforms


Model Areas  Supported
Watershed              None
Receiving Water         Medium
Ecological              Medium
Air                    None
Groundwater            None
                                                151

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Model Capabilities

Conceptual Basis
In CE-QUAL-R1, the reservoir is conceptualized as a vertical sequence of horizontal layers in which thermal energy
and materials are uniformly distributed in each layer.


Scientific Detail
The mathematical structure is based on a set of differential equations that express conservation of mass and energy
in each horizontal layer. Solution of these equations provides material or energy concentrations as functions of time
and depth. The thermal analysis portion of CE-QUAL-R1 is provided as an independent model (CETHERM-R1) to
simplify simulation of water budgets and temperature profiles. CETHERM-R1 includes the variables of temperature,
suspended solids, and total dissolved solids. The algorithms representing physical processes are the same as in CE-
QUAL-R1. The flux model calculates and lists the rates of change for all biological processes, which should aid the
user in correctly predicting variable concentrations.


Model Framework
    •   One-dimensional vertical waterbody
    •   Deep reservoirs


Scale

Spatial Scale
    •   One-dimensional vertical


Temporal Scale
    •   User-defined timestep, typically seconds


Assumptions
    •   Laterally and longitudinally averaged reservoir layers
    •   Well-mixed in each layer


Model Strengths
The model is capable of simulating physical, chemical, and biological factors, including radiation and heat transfer;
conservative substance  routing; suspended  solids routing and settling; dissolved oxygen through aeration,
photosynthesis,  respiration,  and  organic decomposition; carbon,  nitrogen, and phosphorus cycles;  dynamics and
trophic relationships of phytoplankton and macrophytes; coliform bacteria mortality; and accumulation, dispersion,
and reoxidation of manganese, iron, and sulfide when anaerobic conditions prevail.


Model Limitations
Limitations include the one-dimensional representation of reservoirs that limits simulation to a vertical series of
well-mixed horizontal layers. This assumption cannot predict longitudinal and lateral variations in water quality and
requires the assumption  of instantaneous dispersion of all inflow quantities and constituents throughout  the
horizontal layers. The model assumes that the dynamics of each physical, chemical, and biological component can
be described by the principle of  conservation of mass.  Because  the equations are not solved in closed form, minor
errors concerning the conservation of mass can occur. The dynamic  calculation of nutrient flux from bottom
sediments is not included.

Application History
Application example: Eau Galle Reservoir, Wisconsin
                                                  152

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Model Evaluation
Not available


Model Inputs
    •  Initial conditions
    •  Time sequences of boundary conditions (inputs from watershed sources and discharges)
    •  Reservoir geometry
    •  Physical coefficients
    •  Biological and chemical reaction rates
    •  Time sequences of hydrometeorological conditions


Users' Guide
Available online: http://www.wes.army.mil/el/elmodels/pdf/ire82-l/ire82-l.pdf


Technical Hardware/Software Requirements

Computer hardware:
    •  PC


Operating system:
    •  PC-DOS


Programming language:
    •  FORTRAN


Runtime estimates:
    •  Minutes to hours


Linkages Supported
None


Related Systems
None


Sensitivity/Uncertainty/Calibration
Not available


Model Interface Capabilities
    •  WES WIN is an interactive Windows package to execute CE-QUAL-R1.
    •  WESPLOT is for post-processing the  modeling results.


References
U.S. Army Corps of Engineers, South Florida Water Management District and Kimley-Horn and Associates, Inc.
2003. Comprehensive Everglade Restoration Plan, G.I. - Water Quality Modeling, G.I.I. - Reservoir Phosphorus
Uptake Model - Interim Report. U.S. Army Corps of Engineers, South Florida Water Management District.
                                              153

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Environmental Laboratory. 1990. A dynamic one-dimensional (longitudinal) water quality model for streams: User's
manual. CE-QUAL-R1. U.S. Army Corps of Engineers Waterways Experiment Station, Vicksburg, MS.

Nestler, J.M., Lt. Scheider, and B.R. Hall. 1993. Development of a simplified approach for assessing the effects of
water release temperatures  on tailwater habitat  downstream of Fort Peck,  Garrison,  and Fort Randall Dams.
Technical Report EL-93-23. U.S. Army Corps of Engineers Waterways Experiment Station, Vicksburg, MS.

Zimmerman,  M.J., and M.S.  Dortch.  1989.  Modeling water quality of a  regulated  stream  below  a  peaking
hydropower dam. Regulated Rivers: Research and Management. 4: 235-247.
                                                 154

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                                      CE-QUAL-RIV1


Contact Information
Toni Toney
U.S. Army Corps of Engineers
Engineer Research and Development Center
Waterways Experiment Station
Environmental Laboratory
ATTN: CEERD-EP-W
3 909 Halls Ferry Road
Vicksburg, MS 39180
Toni.Tonevfg.erdc.usace.armv.mil
http://www.wes.armv.mil/el/elmodels/rivlinfo.html


Download Information
Availability: Nonproprietary download currently for U.S. Army Corps of Engineers use only
Cost: N/A


Model Overview/Abstract
CE-QUAL-RIVl is a coupled one-dimensional hydrodynamic and water quality model for river systems. The model
consists of two parts, a hydrodynamic code (RIV1H) and a water quality code (RIV1Q). RIV1H is applied first to
predict flows,  depths,  velocities, water surface  elevations,  and other hydraulic characteristics. RIV1Q uses the
RIV1H output file to drive the transport of the water quality variables. RIV1Q can predict variations in each of 12
state variables—temperature, carbonaceous biochemical oxygen demand (CBOD), organic nitrogen,  ammonia
nitrogen, nitrate + nitrite nitrogen,  dissolved oxygen, organic phosphorus, dissolved phosphates, algae,  dissolved
iron, dissolved manganese, and coliform bacteria. In addition, the impacts of macrophytes can be simulated.


Model Features
    •    One-dimensional unsteady flow
    •    Nutrients, dissolved oxygen dynamics, eutrophication, metals, and bacteria


Model Areas Supported
Watershed             None
Receiving Water        High
Ecological             Medium
Air                   None
Groundwater           None


Model Capabilities

Conceptual Basis
In CE-QUAL-RIVl, the river is conceptualized as a series of horizontal grids in one-dimension.
                                               155

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Scientific Detail
The governing equations for CE-QUAL-RIV1 consist of continuity equation, momentum equation, and constituent
fate and transport equation. The Preissmann's implicit scheme is applied to solve the governing equations for flow.
The advection of the constituent transport is solved using a fourth-order explicit scheme. The diffusion of the
constituent transport is solved using an implicit scheme. The source/sink and reaction of water quality variables are
solved separately.


Model Framework
    •   One-dimensional horizontal model
    •   River


Scale

Spatial Scale
    •   One-dimensional horizontal


Temporal Scale
    •   User-defined timestep
    •   Time-variable simulation of flow and water quality variables


Assumptions
    •   No lateral circulation
    •   Hydrostatic assumption
    •   No lateral variation of water quality variables


Model Strengths
    •   Provides a high-order accuracy advection scheme to deal with various flow conditions
    •   Is capable of simulating physical, chemical, and biological processes in rivers


Model Limitations
    •   Cannot model a one-dimensional tidal system
    •   Does not include a sediment diagenesis component


Application History
Application example: water temperature and dissolved oxygen simulation of Youghiogheny River, Pennsylvania


Model Evaluation
Not available


Model Inputs
    •   Initial conditions
    •   Boundary conditions
    •   Segmentation of river network
    •   Physical and biological parameters


Users' Guide
Available online: http://www.wes.army.mil/el/elmodels/pdf/el952/el-95-2.pdf
                                                 156

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Technical Hardware/Software Requirements

Computer hardware:
    •   PC


Operating system:
    •   PC-DOS, Windows


Programming language:
    •   FORTRAN


Runtime estimates:
    •   Minutes to hours


Linkages Supported
None


Related Systems
EFDC1D, DYNHYD5/WASP5


Sensitivity/Uncertainty/Calibration
Not available


Model Interface Capabilities
Not available


References
Environmental Laboratory. CE-QUAL-RIV1: a dynamic, one-dimensional (longitudinal) water quality model for
streams. (Computer program manual). U.S. Army Corps of Engineers.
                                           157

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                                        CE-QUAL-W2


Contact Information
Thomas M.  Cole
U.S. Army Corps of Engineers
Engineer Research and Development Center
Waterways Experiment Station
Environmental Laboratory
ATTN: CEERD-EP-W
3 909 Halls Ferry Road
Vicksburg, MS 39180
(601)634-3283
tcole(@,lasher. wes.army.mil
http ://www. wes.army. mil/el/elmodels/index. html

Scott Wells
Professor
Department of Civil and Environmental Engineering
Portland State University
P.O. Box 751
Portland, OR 97207-0751
(503) 725-4276
scott(@,cecs.pdx.edu
http://www.cee.pdx.edu/w2/


Download Information
Availability: Nonproprietary
Cost: N/A


Model Overview/Abstract
CE-QUAL-W2 is a two-dimensional,  longitudinal/vertical, laterally averaged, finite-difference hydrodynamic and
water quality model. Because the model assumes lateral homogeneity, it is best suited for relatively long, narrow
waterbodies exhibiting longitudinal and vertical water quality gradients. The model can be applied to rivers, lakes,
reservoirs, and estuaries. Branched networks can be modeled.

The model accommodates variable grid spacing (segment lengths and layer thicknesses) so that greater resolution in
the grid can be specified where needed. The model equations are based on the hydrostatic approximation (negligible
vertical accelerations). Eddy coefficients are used to model turbulence.  The  hydrodynamic timestep is calculated
internally as the maximum allowable timestep that ensures numerical stability. A third-order accurate (QUICKEST)
advection scheme reduces numerical diffusion.

The water quality portion of the model includes the major processes of eutrophication kinetics and a single algal
compartment. The bottom sediment compartment stores settled particles, releases nutrients to the water column, and
exerts sediment  oxygen  demand based  on user-supplied fluxes; a full sediment  diagenesis  model is under
development.


Model Features
    •   Reservoir and river hydrodynamics and transport
                                                 158

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    •   Temperature simulation
    •   Water quality modeling
    •   Eutrophication


Model Areas Supported
Watershed               None
Receiving water          High
Ecological               Low
Air                     None
Groundwater            None


Model Capabilities

Conceptual Basis
In CE-QUAL-W2, the river or reservoir is conceptualized as a laterally averaged two-dimensional model having
horizontal segments and vertical layers.


Scientific Detail
The mathematical structure is based on a set of differential equations that express conservation of mass and energy
in each horizontal layer. Solution of these equations provides material or energy concentrations as functions of time
and depth. Some of the key model features are given below:

    •   Variable layer heights and segment lengths between waterbodies; surface layer can extend through multiple
        layers
    •   Ability to model multiple waterbodies in  the  same computational grid, including  multiple  reservoirs,
        steeply sloping riverine sections between reservoirs, and estuaries
    •   Momentum transfer between branches
    •   Additional reaeration algorithms for rivers
    •   Additional vertical turbulence algorithms for rivers
    •   Numerical algorithms for pipe, weir, spillway, and pump flow
    •   Internal weir algorithm for submerged or skimmer weirs
    •   The effect of hydraulic structures on gas transfer and total dissolved gas transport
    •   Algorithm to calculate the maximum allowable  timestep and adjust the timestep to ensure hydrodynamic
        stability requirements were not violated (autostepping)
    •   A selective withdrawal algorithm that calculates a withdrawal zone based on outflow, outlet geometry, and
        upstream density gradients
    •   Higher-order transport scheme (QUICKEST) that reduces numerical diffusion.  Leonard's ULTIMATE
        algorithm, which eliminates over/undershooting in the  transport  solution scheme, has been added. The
        QUICKEST can be used alone or in conjunction with the ULTIMATE scheme, where oscillations due to
        over/undershoots are encountered.
    •   Step function or linear interpolation of inputs
    •   Ice-cover algorithm
    •   Internal calculation of equilibrium temperatures and coefficients  of surface heat exchange or  a term-by-
        term accounting of surface heat exchange
    •   Generalized time-varying data input subroutine with input data accepted at any frequency
    •   Sediment/water heat exchange
    •   Any number of user-defined arbitrary constituents defined by a decay rate, settling rate, and temperature
        rate multiplier that can include conservative tracers, coliform bacteria, water age, and contaminants
    •   An implicit solution for the effects of vertical eddy viscosity in the  horizontal momentum equation
    •   Momentum transfer between branches
    •   Any number of user-defined phytoplankton, epiphyton, CBOB, and inorganic solids groups
    •   Dissolved and paniculate biogenic silica
                                                  159

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    •   Derived constituents, such as total DOC, organic nitrogen, and organic phosphorus, that are not state
        variables
    •   Ability to output kinetic fluxes


Model Framework
The  model  predicts water surface  elevations,  velocities, and  temperatures. Temperature  is  included  in  the
hydrodynamic calculations because of its effect on water density. The water quality algorithms incorporate 21
constituents  in addition to temperature, including nutrient/phytoplankton/dissolved  oxygen interactions  during
anoxic conditions.  Any combination of constituents can be simulated. The effects of salinity or total dissolved
solids/salinity on density and thus on hydrodynamics are included only if they are simulated in the water quality
module. The water quality algorithm is modular, allowing constituents to be easily added as subroutines. The model
can be applied to estuaries, rivers, or portions of a waterbody by specifying upstream or downstream head boundary
conditions. The branching algorithm allows application to  geometrically complex waterbodies such as dendritic
reservoirs or estuaries. Variable segment lengths and layer thicknesses can be used, allowing specification of higher
resolution where  needed.  Water  quality can be  updated less  frequently  than hydrodynamics,  thus reducing
computational requirements.  However, water  quality  kinetics are not  decoupled from the  hydrodynamics (i.e.,
separate, standalone code for hydrodynamics and water quality where output from the hydrodynamic model is stored
on disk and then used to specify advective fluxes for the water quality computations).


Scale

Spatial Scale
    •   Two-dimensional  in the horizontal and vertical direction, with any number of waterbodies having any
        number of branches
    •   Previous applications have used a horizontal grid spacing of 100 to 10,000 m and a vertical grid spacing of
        0.2 to 5 m


Temporal Scale
    •   User-defined timestep


Assumptions
    •   Dynamics of each physical,  chemical, and biological component can be described by the principle of
        conservation of mass.
    •   Waterbody is laterally averaged.


Model Strengths
    •   Can model hydrodynamics and  water quality for entire river basin with dams, river, and lakes,  with a
        variety of hydraulic structures.
    •   A higher-order transport scheme (QUICKEST) that reduces numerical diffusion is included.


Model Limitations
    •   Well-mixed in lateral direction.
    •   Hydrostatic assumption for vertical momentum equation.
    •   Considerable technical expertise in hydrodynamics and eutrophication/water quality  processes is required
        to apply the model.
    •   Simplistic sediment oxygen demand; the model does not have a sediment diagenisis compartment.
    •   No zooplankton or macrophyte.
    •   No toxics.
    •   Pre-processor of the model only helps in creating the main  control  file and bathymetry visualization and
        editing. No bathymetry grid generator or data display/preparation or post-processing capabilities.
                                                  160

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Application History
The model has been successfully applied to more than 100 waterbodies. Apart from the example applications
provided in the user's manual, a partial list of CE-QUAL-W2 applications can be found at
http://www.ce.pdx.edu/w2/w2app.htm.


Model Evaluation
Unknown


Model Inputs
    •  Initial conditions
    •  Time sequences of boundary conditions (inputs from watershed sources and discharges)
    •  Reservoir geometry
    •  Physical coefficients
    •  Biological and chemical reaction rates
    •  Time sequences of hydrometeorological conditions


Users' Guide
User documentation can be downloaded along with the model: http://www.ce.pdx.edu/w2 or
http ://www. wes.army. mil/el/elmodels/index. html


Technical Hardware/Software Requirements

Computer hardware:
    •  PC


Operating system:
    •  PC-DOS/Windows or UNIX environment


Programming language:
    •  FORTRAN90


Runtime estimates:
    •  Minutes to hours


Linkages Supported
HSPF


Related Systems
Watershed Modeling System (WMS)


Sensitivity/Uncertainty/Calibration
Not available


Model Interface Capabilities
    •  Graphical pre-processor
                                              161

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References
Cole, T.M., and S. A. Wells. 2000. CE-QUAL-W2: A two-dimensional, laterally averaged, hydrodynamic, and water
quality model.  Version 2.0.  Instructional Report EL-95-1. U.S. Army Engineer Waterways Experiment  Station,
Vicksburg, MS.

Cole, T.M., and  S. A. Wells. 2003.  CE-QUAL-W2: A two-dimensional, laterally averaged, Hydrodynamic and
Water Quality Model, Version 3.1. Instruction Report EL-03-1. US Army Engineering and Research Development
Center, Vicksburg, MS.
                                                 162

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    CH3D-IMS:  Curvilinear-grid Hydrodynamics 3D—Integrated Modeling
                                            System


Contact Information
Y. Peter Sheng
Coastal & Oceanographic Engineering
University of Florida
Gainesville, FL 32611-6590
(352) 392-6177
pctc(@,coastal.ufl.edu
http://users.coastal.ufl.edu/~pete/CH3D/


Download Information
Availability: Proprietary
Cost: Contact Dr. Y. Peter Sheng at pete@coastal.ufl.edu


Model Overview/Abstract
CH3D-IMS is an integrated modeling system based on a CH3D model framework. It models circulation, wave,
sediment transport, water quality, light attenuation, and seagrass on curvilinear grids. The circulation is solved using
CH3D. Wave is  modeled  using SWAN framework.  Four additional modules: CH3D-SED3D, CH3D-WQ3D,
CH3D-LA, and CH3D-SAV are used for calculating the sediment transport, water  quality, light attenuation, and
seagrass.


Model Features
    •    Three-dimensional hydrodynamics
    •    Cohesive and noncohesive sediment transport
    •    Nitrogen, phosphorus, phytoplankton, zooplankton, and dissolved oxygen
    •    Light attenuation and seagrass kinetics


Model Areas Supported
Watershed             None
Receiving Water        High
Ecological             High
Air                   None
Groundwater           None


Model Capabilities

Conceptual Basis
The waterbody is conceptualized as a series of grid points on a curvilinear orthogonal coordinate system.


Scientific Detail
The details of the  circulation model are presented in the fact sheet of CH3D. The governing equations for sediment
transport and water quality are solved on a nonorthogonal curvilinear coordinate on the horizontal plane. In the
vertical direction, both the o-coordinate and z-coordinate are provided. Sediment transport and water quality are
solved  using the same timestep as the hydrodynamic calculation.  The  sediment transport processes  include
                                               163

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advection, turbulent mixing, settling/flocculation, deposition, and resuspension. Wave-current interaction inside the
bottom boundary layer also is considered.  For water quality simulation, the nitrogen cycling models  dissolved,
paniculate, organic, and inorganic nitrogen  species; the phosphorus cycling models dissolved, paniculate, organic,
and inorganic phosphorus species. In addition, dissolved oxygen, phytoplankton, and zooplankton are modeled. The
seagrass module calculates the growth and decay of seagrass biomass due to light, nutrient, temperature, and
salinity.


Model Framework
    •   Three-dimensional model
    •   River, lake, reservoir, estuary, ocean


Scale

Spatial Scale
    •   One-dimensional, two-dimensional, and three-dimensional


Temporal Scale
    •   User-defined timestep


Assumptions
    •   Hydrostatic assumption
    •   Boussinesq approximation
    •   Reynold's stress assumption


Model Strengths
    •   Capable of modeling one-dimensional, two-dimensional, and three-dimensional hydrodynamics, sediment
        transport, and eutrophication in various waterbodies with complex bathymetry.
    •   Boundary-fit curvilinear coordinate can represent the waterbody boundaries accurately.
    •   The o and z coordinates in the vertical direction provides flexible options for modeling waterbodies with
        different bathymetry.


Model Limitations
    •   Not a public modeling system.
    •   No source code available.
    •   No user's manual.


Application History
The model has been applied in Chesapeake Bay, James River, Lake Okeechobee, Sarasota Bay, Tampa Bay, Indian
River Lagoon, Florida Bay, St. Johns River, Biscayne Bay, Charlotte Harbor, Gulf of Mexico, and Pinellas County
and offshore.


Model Evaluation
The model has been evaluated in many journal and conference papers.


Model Inputs
    •   Initial conditions
    •   Time sequences of boundary conditions (inputs from watershed sources and discharges)
    •   Reservoir geometry
                                                  164

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    •  Physical coefficients
    •  Biological and chemical reaction rates
    •  Time sequences of hydrometeorological conditions


Users' Guide
Not available


Technical Hardware/Software Requirements

Computer hardware:
    •  VAX, SGI, SUN, DEC, IBM, IBM-PC


Operating system:
    •  PC-DOS, UNIX, WINDOWS, Linux


Programming language:
    •  FORTRAN


Runtime estimates:
    •  Minutes to hours


Linkages Supported
None


Related Systems
POM, EFDC, ECOMSED, GLLVHT


Sensitivity/Uncertainty/Calibration
Not available


Model Interface Capabilities
    •  Arc View-based GUI for grid generation, pre- and post- processing


References
Sheng, Y.P. 1986. A Three-Dimensional Mathematical Model of Coastal, Estuarine and Lake Currents Using
Boundary-Fitted Grid. Technical Report No. 585. Aeronautical Research Associates of Princeton, Princeton, New
Jersey.

Sheng, Y. P. 1989. On modeling three dimensional estuarine and marine hydrodynamics. Ed. Nihoul, J. C. J.,
Elsevier Oceanography Series, 45. 35-54.

Sheng, Y.P., D.E.  Eliason, X.-J.  Chen, and J.-K. Choi.  1991.  A  Three-Dimensional Numerical  Model of
Hydrodynamics and Sediment Transport in Lakes and Estuaries: Theory, Model Development, and Documentation.
Final Report. Environmental Research Laboratory, U.S. Environmental Protection Agency, Athens, GA.

Sheng, Y.P. 1994. Modeling Hydrodynamics and Water Quality Dynamics in Shallow Waters. In Proceedings of the
International Symposium on Ecology and Engineering, Taman Negara, Malaysia, November, 1994.
                                               165

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       CH3D-SED (& CH3D-WES):  Curvilinear Hydrodynamics in Three
                                         Dimensions


Contact Information
Phu Luong
U.S. Army Engineer Corp of Engineers
Waterways Experiment Station
Coastal and Hydraulics Laboratory
3 909 Halls Ferry Road
Vicksburg, MS 39180-6199
(601)634-4472
Phu.V.Luong(@,erdc.usace.army.mil


Download Information
Availability: Available only to Department of Defense Agencies
Cost: N/A


Model Overview/Abstract
CH3D-SED is the newly developed mobile bed version of CH3D-WES, which was developed for the Chesapeake
Bay Program. The USAGE is using it to investigate  sedimentation on bendways, crossings, and distributaries on the
lower  Mississippi and Atchafalaya  rivers.  These applications address dredging, channel evolution, and channel
training structure evaluations. CH3D-SED functions as a hydrodynamic (through the incorporation of CH3D-WES)
and sediment transport model. Physical processes  affecting circulation and vertical mixing that can be modeled
include tides, wind, density effects (salinity and temperature), freshwater inflows, turbulence, and the effect of the
earth's rotation. CH3D-SED can be applied to rivers, lakes, reservoirs, estuaries, or coastal waters.


Model Features
    •   Hydrodynamic
    •   Sediment transport
    •   Linkage to CE-QUAL-IC water quality model


Model Areas Supported
Watershed             None
Receiving Water        High
Ecological             None
Air                   None
Groundwater           None


Model Capabilities

Conceptual Basis
The CH3D-SED hydrodynamic and sediment  transport model is based on an extension of the stretched vertical
coordinate version of the CH3D-SED by Spasojevic and Holly (1997) to include cohesive sediment transport. The
model is capable of two- or three-dimensional operation and employs standard formulations for settling, deposition,
and resuspension.
                                               166

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CH3D-WES makes hydrodynamic computations on a curvilinear or boundary-fitted platform grid. Deep navigation
channels and irregular shorelines can be modeled because of the boundary-fitted coordinates feature of the model.
Vertical  turbulence is predicted by the  model and is  crucial to  a successful  simulation of stratification,
destratification, and anoxia. A second-order model based on the assumption of local equilibrium of turbulence is
employed.

A boundary-fitted, nonorthogonal, finite-difference  approximation in the  horizontal  plane and a sigma-stretched
approximation in the vertical direction are used for the approximations of the governing equations.


Scientific Detail
The  hydrodynamic  model  solves the depth-averaged Reynolds approximation of the  momentum equation  for
velocity and the depth-averaged conservation of mass equation for water surface elevation. The three-dimensional
velocity  field is  determined by  computing the deviation from the  depth-averaged  velocity by  solving  the
conservation of mass equation in conjunction with a k-e closure for vertical momentum diffusion.

Sedimentation computations are based on a two-dimensional solution of the conservation of mass equation for  the
channel bed,  and three-dimensional advection-diffusion equation for suspended sediment transport. The sediment
transport algorithms independently account for the movement of sediment as either bed load or suspended load, as
well as the exchange of sediment between these  two  modes of transport. The  model is  also generalized  for
application to mixed-grain-size sediments, with  appropriate bed material sorting and armoring  routines. The
formulation to a  user-specified  multiple-grain-size  distribution uniquely  allows  the simulation  of erosion,
entrainment,  transport, and deposition of contaminated sediments on the bed  and in the water column.  A
contaminated sediment associated with a given grain size can be independently accounted for by applying a small
dimensional perturbation from the reference grain size. This perturbation has negligible effects on sediment mobility
characteristics.  Because  each grain size specification is independently tracked,  however, tracking of zones of
contaminated bed material is possible.


Model Framework
    •   Curvilinear Finite Difference  Numerical Formulations for Hydrodynamic and Sediment Transport


Scale

Spatial Scale
    •   Three-dimensional


Temporal Scale
    •   Dynamic


Assumptions
    •   Based on accepted formulations  of the  three-dimensional,  hydrostatic, hydrodynamic equations  and
        conservative transport equation.


Model Strengths
    •   Strong capabilities for hydrodynamics and sediment transport.


Model Limitations
    •   Considerable technical expertise in hydrodynamics is required to use the model effectively.
                                                  167

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Application History
CH3D-SED was applied to investigate maintenance dredging quantities for channel alignment studies on the lower
Atchafalaya River (Hall 1996). The model successfully reproduced existing sediment deposition quantities and
locations,  and it was instrumental in the decision made by the local sponsor to maintain the existing channel
alignment.

The capabilities of CH3D are illustrated by its application to the Chesapeake Bay. The numerical grid employed in
the Chesapeake Bay model has 734 active horizontal cells and a maximum of 15 vertical layers, resulting in 3,992
computational cells.  Grid resolution is 1.52 m vertical and approximately  10 km longitudinal and 3 km lateral. The
x, y coordinates of the  grid are transformed into the c-curvilinear coordinates to allow for better handling of the
complex horizontal  geometries. Velocity is also transformed so that its components are perpendicular to the c-
coordinate lines, thus allowing boundary conditions to be prescribed on a boundary-fitted grid in the same manner as
on a Cartesian  grid. Major tributaries are  modeled three-dimensionally  in the lower reach of the  bay and two-
dimensionally with constant width in the upper reach.

Cerco et al. (1993) used CH3D-WES in conjunction with CE-QUAL-ICM to predict water column and sediment
processes that affect  water quality in the Chesapeake Bay. Data from 1984-1986 were used, and the linked modeling
approach was successful in predicting the spring algal bloom, onset and breakup of summer anoxia, and coupling of
organic particle deposition with sediment-water nutrient and oxygen fluxes.


Model Evaluation
Johnson et al.  (1993)  validated  the model by applying it to six datasets. The first  three datasets contained
approximately one month's worth of data each and represented a dry summer condition, a spring runoff, and a fall
wind-mixing event. The last three applications were yearlong simulations for 1984 (a wet year), 1985 (a dry year),
and 1986 (an average year). Results demonstrate that the model is a good representation of the hydrodynamics of the
Chesapeake Bay and its major tributaries.


Model Inputs
    •   Time-varying water-surface elevations,  salinity, and temperature conditions at the ocean entrance and at
        freshwater inflows at the head of all tributaries.
    •   Time-varying wind and surface heat exchange data at one or more locations.
    •   All input data,  including initial conditions, bathymetry, boundary, and computational control data are input
        from fixed files.


Users' Guide
Not available


Technical Hardware/Software Requirements

Computer hardware:
    •   Unix workstation or super computer.


Operating system:
    •   Unix


Programming language:
    •   FORTRAN


Run time estimates:
    •   Compute intensive
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    •   Run time is  highly dependent on computer hardware,  model domain spatial resolution, the  period of
        prototype conditions  simulated and  other  options such  as  whether  the model  is  simulation only
        hydrodynamic or hydrodynamics and the fate and transport of dissolved and suspended material. Under this
        wide range of variability, simulations could require minutes to weeks.


Linkages Supported
CE-QUAL-ICM


Related Systems
Surface Water Modeling System (SMS)


Sensitivity/Uncertainty/Calibration
Not available


Model Interface Capabilities
    •   US Army Corps of Engineers Surface Water Modeling System (SMS)


References
Cerco, C.F.  and  T.  Cole.  1993.  Three-Dimensional  Eutrophication  Model of Chesapeake Bay. Journal of
Environmental Engineering. 119(6): 1006-1025.

Chapman, Raymond S., Billy H. Johnson, and  S. Rao Vemulakonda. 1996. User's Guide for the Sigma Stretched
Version  of CH3D-WES. Technical Report HL-96-21.  U.S.  Army Engineer Waterways Experiment Station,
Vicksburg, MS.

Engel, John J., Rollin H. Hotchkiss, and Brad R. Hall.  1995. Three Dimensional Sediment Transport  Modeling
Using CH3D Computer Model. In Proceedings  of the First International Water Resources Engineering Conference,
William H. Espey Jr. and Phil G. Combs, ed., American Society of Civil Engineers, New York, 1995, pp. 628-632.

Hall, Brad R. 1996. Quantifying Sedimentation Using a Three Dimensional Sedimentation Model. In Proceedings of
Water Quality "96, llth Seminar, Corps of Engineers Committee on Water Quality, Seattle, WA, 1996, pp. 88-93.

Johnson, B.H., K. W. Kim, R.E.  Heath, B.B. Hsieh, and H.L.  Butler. 1993. Validation of Three-Dimensional
Hydrodynamic Model of Chesapeake Bay. Journal of Hydraulic Engineering. 119(1):2-20.

Johnson, B.H., R.E. Heath,  B.B. Hsieh, K.W. Kim,  H.L. Butler. 1991. User's  Guide for a Three-Dimensional
Numerical Hydrodynamic, Salinity, and Temperature Model of Chesapeake Bay. (Computer program manual).
Department of the Army, Waterways Experiment Station, Corps of Engineers, Vicksburg, MS.

Spasojevic,  Miodrag  and Forrest  M. Holly.  1994.  Three-Dimensional Numerical Simulation  of Mobile-Bed
Hydrodynamics. Contract Report HL-94-2. U.S. Army Engineer Waterways Experiment Station, Vicksburg, MS.

Van Rijn, Leo C. 1984a. Sediment Transport, Part I: Bed Load Transport. Journal of Hydraulic Engineering, ASCE.
110(10):1431-1456.

Van Rijn, Leo C. 1984b. Sediment Transport, Part II: Suspended Load Transport. Journal of Hydraulic Engineering,
ASCE. 110(11):1613-1641.
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                                            DELFT3D


Contact Information
WL | Delft Hydraulics
Rotterdamseweg 185
P.O. Box 177
2600 MH Delft
The Netherlands
+31 152858585
delft3d.info(g),wlderft.nl
www.wlderft.nl/d3d


Download Information
Availability: Proprietary
Cost: Varies by user type (academic, governmental, private)
DelftSD may be purchased as an integrated package or in individual modules. The GUI will be part of any initial
purchase. WL | Delft Hydraulics will take care of the set-up and calibration of the model applications for clients.


Model Overview/Abstract
DelftSD models two- and three-dimensional flow  and transport for tidal  and riverine problems. DelftSD is an
integrated modeling environment for hydrodynamics, waves, sediment transport, morphology, water quality, and
ecology. Relevant applications include

    •   Prediction of nearshore currents and waves
    •   Prediction of small scale morphology
    •   Estimation of bathymetry
    •   Prediction of large-scale morphology based on historical observations
    •   Prediction of short- and long-term effects of structures
    •   Prediction of the effects of dike or dam breaches

The model can be applied to  rivers,  lakes, reservoirs, estuaries, and  coastal waters. DeftSD can be applied to
evaluate

    •   Hydrodynamics—salt  intrusion; river flow simulations; fresh water  river discharges  in bays; thermal
        stratification in lakes, seas and reservoirs; cooling water  intakes  and waste water  outlets; transport of
        dissolved material and pollutants; tide and wind driven flows (i.e., storm surges); stratified  and density
        driven flows; and wave driven flows
    •   Sediment  transport—transport  of cohesive  and  non-cohesive  sediments,  e.g.,  spreading  of dredged
        materials to study sediment/erosion pattern.
    •   Contaminant transport— evaluation of over 140 substances including contaminants in 2 sediment layers.


Model Features
    •   Hydrodynamics
    •   Waves
    •   Sediment transport
    •   Morphology
    •   Water quality
    •   Particle tracking for water quality
                                                  170

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    •   Ecology


Model Areas Supported
Watershed              None
Receiving Water        High
Ecological              None
Air                    None
Groundwater           None


Model Capabilities

Conceptual Basis


Scientific Detail
DelftSD includes the following modules:

    •   Hydrodynamics module (Delft3D-FLOW)
    •   Wave module (Delft3D-WAVE)
    •   Water quality module (Delft3D-WAQ)
    •   Particle tracking module (Delft3D-PART)
    •   Ecological module (DelftSD-ECO)
    •   Sediment transport module (Delft3D-SED)
    •   Morphdynamic module (Delft3D-MOR)


Hydrodynamic
The FLOW  module of DelftSD is a multi-dimensional (two- or three-dimensional) hydrodynamic (and transport)
simulation program that calculates non-steady flow and transport phenomena resulting from tidal and meteorological
forcing on a curvilinear, boundary-fitted grid. Features of the FLOW module include

    •   Coriolis force
    •   Advection-diffusion  solver included to  compute, for  example,  density gradients (due to nonuniform
        temperature and salinity concentration distributions)
    •   Inclusion of pressure gradients terms in the momentum equation (density driven flows)
    •   Turbulence model to account for the vertical turbulent viscosity and diffusivity based on the eddy viscosity
        concept.
    •   Shear stresses exerted by the turbulent  flow on  the bottom based on a quadratic Chezy  or Manning's
        formula
    •   Wind stresses on the water surface modeled by a quadratic friction law
    •   Simulation of the thermal discharge, effluent discharge, and the intake of cooling water at any location and
        any depth in the computational field (advective-diffusion module)
    •   Facility to calculate drogue tracks
    •   Simulation of drying and flooding  of intertidal flats  (moving boundaries) for both two-dimensional and
        three-dimensional cases


Sediment Transport
The SED module can be applied in all geographic regions where DelftSD is used. The module is generally used to
calculate the short-term transport of sediment and sand. In particular the SED is used when the effect of changes in
bottom topography on flow conditions can be neglected. For long-term development of the bottom topography or
coastal morphology, a separate morphological module  with  coupling capabilities with the FLOW and WAVE
modules can be applied. The following discusses the standard features of the SED module.
                                                 171

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Sedimentation
    •   Effects of "hindered settling" (i.e., decrease  in sedimentation velocity at very high suspended solids
        concentration) can be included
    •   Each of the paniculate fractions are treated independently (i.e., sand and silt)
    •   Bottom shear stresses take into account currents, waves, and effects of shipping and fisheries


Re-suspension
    •   The  re-suspension flux is limited based on the available amount of sediment in a sediment layer for the
        variable layer option. The re-suspension is unlimited if the fixed layer option is used
    •   Re-suspension flux is zero if the water depth becomes too small
    •   The effect of short waves (on the sediment transport) can only be taken into account as wind effects


Burial
    •   Sediment can be transferred downward from one sediment layer to an underlying layer in a process known
        as "burial"
Upward sediment transport ("Digging")
    •   Sediment can be transferred upward to one sediment layer from an underlying layer in a process known as
        digging


Contaminant Transport
The WAQ module of DLFT3D is a general water quality program capable of describing a wide range of water
quality processes. The water quality processes may be described by arbitrary linear or nonlinear functions of the
selected state variables and model parameters. Typical types of applications are

    •   Exchange of substances with the atmosphere (oxygen, volatile organic substances, temperature)
    •   Adsorption and desorption of contaminant substances (heavy metals, organic micropollutants) and ortho-
        phosporous
    •   Deposition of particles and adsorbed substances to the bed
    •   Re-suspension of particles and adsorbed substances from the bed


Model Framework
    •   Three-dimensional curvilinear-orthogonal finite difference


Scale

Spatial Scale
    •   Three-dimensional


Temporal Scale
    •   Dynamic


Assumptions
    •   Based  on accepted  formulations of the  three-dimensional hydrostatic hydrodynamic equations and
        conservative transport equation


Model Strengths
    •   Strong capabilities for hydrodynamics
                                                  172

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Model Limitations
    •   Considerable technical expertise in hydrodynamics is required to use the model effectively


Application History
DelftSD has been used for storm surge and flood forecasting in India and typhoon surge modeling in Vietnam.
DelftSD has also been used to model other estuarine and riverine systems, such as Victoria Harbor in Hong Kong.

The DELFT3D hydrographic model was used for large-scale hydrodynamics and connected mass transport in Lake
Malawi/Nyasa/Niassa.

DELFT3D was also used to support the project, Sustainable Development of the Laguna de Bay Environment.


Model Evaluation
Although there are no specific evaluation studies available,  as a policy,  new versions are released only after an
internal, 6 month test and application period to ensure stable and validated products.


Model Inputs
    •   Time-varying water-surface elevations,  salinity, and temperature conditions at the ocean entrance and at
        freshwater inflows at the head of all tributaries
    •   Time-varying wind and surface heat exchange data at one or more locations
    •   All input data, including initial conditions, bathymetry, boundary, and computational control data are input
        from fixed files


Users' Guide
    •   Must be purchased with model


Technical Hardware/Software Requirements

Computer hardware:
    •   PC and Unix Workstations


Operating system:
    •   UNIX workstations (HP, SGI and Sun) or Windows/Intel platform (Windows 95, 98 and NT4)


Programming language:
    •   FORTRAN


Runtime estimates:
    •   Computation intensive
    •   Run time is highly dependent  on computer hardware, model domain, spatial resolution,  the period of
        prototype  conditions  simulated,  and  other options,  such as  whether the  model is simulation-only
        hydrodynamic or hydrodynamics and the fate and transport of dissolved and suspended material. Under this
        wide range of variability, simulations could require minutes to weeks


Linkages Supported
None
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Related Systems
None
Sensitivity/Uncertainty/Calibration
Not available
Model Interface Capabilities
    •   Visualization: Delft-GPP
    •   Grid generator: Delft-RGFGRID
    •   Bathymetry generator: Delft-QUICKIN


References
Not available
                                            174

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     DIAS/IDLAMS: Dynamic Information Architecture System/Integrated
                 Dynamic Landscape Modeling and Analysis System


Contact Information
Pamela J. Sydelko
Decision and Information
Sciences Division
Argonne National Laboratory
9700 S. Cass Avenue, Bldg. 900
Argonne, IL 60439
(630) 252-6727
svdelko(@,dis.anl.gov
http://www.dis.anl.gov/idlams/index.html


Download Information
Availability: Nonproprietary
Need to  contact the author. A Java version of DIAS is available for customization.
Cost: DIAS is licensed but free for government agencies.


Model Overview/Abstract
Argonne's   Integrated  Dynamic Landscape  Analysis  and  Modeling  System  (IDLAMS)  integrates  data,
environmental models, land-use planning, and decision support technologies through a GIS-based framework (GIS-
IDLAMS). The IDLAMS prototype is populated with models appropriate for use by military land managers and
decision makers at Fort Riley, Kansas, and can be used to

    •   Simulate "what-if'  scenarios for predicting future ecological conditions under a given land management
        plan
    •   Incorporate trade-off analyses when comparing different land management alternatives
    •   Identify and resolve land-use issues and determine cost-effective solutions to long-term land stewardship
        problems

Recently, IDLAMS has evolved to take advantage of a  flexible,  dynamic,  and  cost-effective object-oriented
approach. This new framework, called  OO-IDLAMS, is built on Argonne's DIAS,  a generic, object-oriented
architecture that supports distributed, dynamic representation of interlinked processes.

OO-IDLAMS provides environmental managers  and decision makers with a  strategic,  adaptive approach to
integrated natural resources planning and ecosystem management. The OO-IDLAMS framework

    •   Brings together disparate  data  and software for  integrated natural resource  planning and ecosystem
        management in a flexible and adaptive way
    •   Provides the ability  to reflect the  dynamics of living ecosystems, land uses, and land management activities
    •   Reduces the  cost of simulation modeling by  using  and  reusing existing data, models,  and system
        components with minimal reworking
    •   Allows for a comprehensive regional, landscape, or ecosystem approach
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Model Features

GIS-IDLAMS
    •   Vegetation dynamics simulation
    •   Wildlife habitat suitability modeling
    •   Erosion calculated using Revised Universal Soil Loss Equation (RUSLE)
    •   Trade-off analyses for land management alternatives


OO-IDLAMS
    •   Object-oriented architecture,  military  land management, integrated natural resource planning,  adaptive
        ecosystem management, run-time model interoperability, code reuse, environmental decision support
    •   Vegetation dynamics simulation
    •   Henslow's Sparrow habitat model
    •   Human activities simulation for military training, burning, and planting


Model Areas Supported
Watershed              Medium
Receiving Water        None
Ecological              High, Medium
Air                    None
Groundwater           None


Model Capabilities

Conceptual Basis
Uses GIS or object-oriented BIAS to integrate natural resource planning, ecosystem management, and simulation
models and to support environmental decision making processes.


Scientific Detail
Four major models were developed  and integrated for the GIS-IDLAMS prototype: (1) a vegetation dynamics
model, (2) a set of wildlife habitat suitability models, (3) an erosion model, and (4) a scenario evaluation module.


Vegetation Dynamics Model
The Vegetation Dynamics Model is the core model for IDLAMS because the output from this model is the  input for
all other connected  IDLAMS models. The Vegetation Dynamics Model is a  spatially explicit  model  that
incorporates vegetation changes due to (1) natural succession, (2)  land use impacts,  and (3) land management
actions.


Wildlife Models
The Wildlife Models are five submodels that represent individual wildlife species and are based on U.S.  Fish and
Wildlife  Service  Habitat  Suitability Indices  (HSIs). Each  submodel requires  that the user  input  either  a
vegetation/landcover map  representing the current condition or a simulated  landcover map generated by the
Vegetation Dynamics Model. In some submodels, additional input maps may be required.


Erosion Model
IDLAMS currently integrates RUSLE to generate an erosion status map for each current condition or simulated
vegetation/landcover map input by the user. RUSLE  also requires other spatial data representing various factors
affecting erosion.
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Scenario Evaluation Module
IDLAMS uses a value-based decision-analysis process to link the ecological models with the management needs and
user requirements  of the resource manager. This module is then used  to perform trade-off analyses for land
management alternatives, on the basis of the results from the spatially explicit modeling, and to rank the alternatives
according to how well they meet the specified objectives.

In OO-IDLAMS, because the  objective  of the research was to demonstrate the advantages of this new object-
oriented architecture approach rather than to totally rebuild the old IDLAMS, the OO-IDLAMS prototype integrates
only a subset of the original IDLAMS. Models in the new OO-IDLAMS include the Vegetation Dynamics Model
and the Henslow's Sparrow Habitat Model. In addition, to demonstrate improved modularity and flexibility of OO-
IDLAMS and fully utilize the  object-oriented  capabilities of DIAS, the Military Training and Land Management
components, previously coded within the original Vegetation Dynamics Model, were broken out into three Course
of Action (COA) objects. A DIAS COA object is essentially a flowchart of individual steps constituting a specific
plan or action and is used in DIAS to model procedural or sequential processes. OO-IDLAMS employs an object-
oriented GIS module and provides real-time spatially oriented displays  of an object's positions and/or parameters.


Model Framework
GIS-IDLAMS uses GIS  software as the model integration framework. OO-IDLAMS is built on an object-oriented
architecture called the  DIAS.  DIAS supports distributed,  dynamic  representation of interlinked environmental
processes and behaviors at variable scales (spatial and temporal) of resolution and aggregation. For integrated
environmental modeling, the main components of a DIAS  simulation are (1) software objects (entity objects) that
represent real-world entities such as  atmosphere,  fish,  or groundwater; and (2)  simulation models or  other
applications that express the dynamic behaviors of the real-world entities (e.g., surface  exchange,  reproductive
cycles, and fate and  transport). In DIAS simulations, external models or applications participate in  a simulation
through a formalized registration process that "wraps" each model or application for use in DIAS. This "wrapping"
procedure requires a formal registration procedure that enables the  DIAS entity  objects to implement external
models to address behaviors. An important feature of DIAS is that the "wrapped"  models and applications run in
their native languages rather than requiring translation to a common or  standard system language.


Scale

Spatial Scale
    •   One-dimensional, grid and subwatershed overland


Temporal Scale
    •   Depends on models integrated in the system


Assumptions
The model assumes that vegetation dynamics caused by natural and human forces  immediately affect the wildlife
habitats. The  model also assumes that the main erosion type in the study area  is sheet and rill erosion that can be
described by RUSLE.


Model Strengths
Argonne's flexible object-oriented approach to model integration overcomes  several limitations of  a GIS-based
integration  framework.  GIS-based systems  are static  in  nature and do not  lend themselves  well to dynamic
intermodel processing. Furthermore, integration of new environmental models or  data formats into  a GIS-based
framework can require time-consuming and expensive reworking of the system.

OO-IDLAMS can execute external applications in their native languages (e.g., FORTRAN and C) and allows them
to dynamically interact with  each other indirectly  via  real-world ecosystem objects  that package attribute
information together with behavior (how the object  acts and reacts). Because external applications do not interact
directly with  one another,  OO-IDLAMS provides  a  robust environment that easily accommodates adding and
                                                  177

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removing applications. The OO-IDLAMS prototype includes an object-oriented GIS (GeoViewer), but in addition,
external GIS software applications can be integrated to provide further spatial analysis functions.

OO-IDLAMS provides a graphical user interface for selecting  appropriate applications and for easy input of data
and parameters. The OO-IDLAMS prototype integration framework runs under both UNIX (Solaris) and Windows
NT platforms.


Model Limitations
Although DIAS provides an excellent framework for the integration of multiple models (even models at different
spatial and temporal scales), it does not solve the more basic ecological and environmental research issues related to
model integration.  These issues include, but are not limited to (1) the ecological implications of multiple-scale
modeling and simulation and (2) the impacts of data aggregation and disaggregations. However, DIAS can be used
as an excellent workbench from which to explore and investigate these issues. In addition, further development of
the DIAS architecture should include the application of uncertainty analysis functionality to models within the DIAS
suite and a multidisciplinary/multiagency approach to object design and development.

Technically, DIAS has the following additional limitations:

    •   Programming languages (C++, SmallTalk, Java, etc.) must be used for a DIAS model integration
    •   Substantial skills are needed for full technical utilization of the system (customization).


Application History
Object-Oriented Integrated Dynamic Landscape Analysis and Modeling System (OO-IDLAMS) is one example of
the application of DIAS, other examples include

Healthcare Management Simulator - This DIAS application was developed to  simulate all  major aspects of
healthcare delivery - clinical/physiological, procedural,  logistical, and financial - at a level of detail appropriate to
the need.

Integrated Ocean Software Architecture - This application of DIAS is an object-based virtual maritime environment
within which existing models are employed to simulate the transition of wind-generated waves in the deep water, to
waves in the near shore environment, then to surf height and currents. The application allows for the use of several
different model combinations according to the complexity of the shoreline and near-shore sea bottoms.


Model Evaluation
Reviewed by Cooperative Research Centre for Catchment Hydrology, Australia
http://science.csumb.edu/~fwatson/publications/B2Report%20001201.pdf


Model Inputs
    •   Landcover map
    •   Successional timestep map
    •   Area impacted by training
    •   Area impacted by burning
    •   Area impacted by planting
    •   Number of maneuver impact miles
    •   RUSLE parameter values (GIS- IDLAMS)


Users' Guide
Not available, need to contact the authors
                                                  178

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Technical Hardware/Software Requirements

Computer hardware:
    •   PC or SUN workstation


Operating system:
    •   UNIX (Solaris) or Windows NT platforms


Programming language:
    •   SmallTalk, C, Java, and FORTRAN


Runtime estimates:
    •   Not available, depends on models integrated in the system


Linkages Supported
None


Related Systems
DIAS


Sensitivity/Uncertainty/Calibration
Not available


Model Interface Capabilities
    •   Windows interface with menus and tool buttons
    •   Map displaying capacity


References
Sydelko, PJ, KA Majerus, JE Dolph, and TN Taxon. 2000. An Advanced Object-Based Software Framework for
Complex Ecosystem Modeling and Simulation. In Proceedings of the 4th International Conference on Integrating
GIS and Environmental Modeling (GIS/EM4): Problems, Prospects and Research Needs, Banff, Alberta, Canada,
September 2-8, 2000.

Campbell, P, and JR Hummel. The Dynamic Information Architecture System: An Advanced Simulation Framework
for Military and Civilian Application. http://www.dis.anl.gov/DIAS/papers/SCS/SCS.html

Christiansen, JH. 2000. A flexible object-based software framework for modeling complex systems with interacting
natural  and societal  processes. In Proceedings of the 4th International Conference on Integrating GIS and
Environmental Modeling (GIS/EM4): Problems, Prospects and Research Needs, Banff, Alberta, Canada, September
2-8, 2000.
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                                                                         Appendix A: Model Fact Sheets
           DRAINMOD: A Hydrological Model for Poorly Drained Soils


Contact Information
R. Wayne Skaggs
Biological and Agricultural Engineering Department
NC State University
Box 7625
Raleigh, NC 27695
(919)515-6739
skaggs(@,eos.ncsu.edu
http://www.bae.ncsu.edu/people/facultv/skaggs


Download Information
Availability: Proprietary
 http://www.bae.ncsu.edu/soil water/drainmod
Cost (if applicable): $250


Model Overview/Abstract
DRAINMOD is a hydrological model developed at North Carolina State University (NCSU) by Dr. Wayne Skaggs
at the Department of Biological and Agricultural Engineering. The model was initially  developed in 1980 for
analyzing field-scale watershed management scenarios for poorly drained soils, but in the last 2 decades it has been
updated and used on both field- and watershed-scale watershed management sites. The model has been updated
several times to extend its capabilities. The latest version,  DRAINMOD Version 5.1, has the original DRAINMOD
hydrology model with the addition of DRAINMOD-N (nitrogen submodel) and DRAINMOD-S (salinity submodel)
into a Windows-based program. The DRAINMOD hydrology  model simulates the hydrology of poorly  drained,
high water table soils on an hourly or daily basis for long periods of weather data. Hourly rainfall is used to compute
the infiltration using a modified Green-Ampt approach and remaining excess rainfall is considered runoff. The water
balance is made using a one-dimensional vertical column, which is further used as inputs  to the  one-dimensional
nitrogen fate and transport module.  In addition to organizing the hydrology, nitrogen, and salinity components of
DRAINMOD, the  graphical user interface allows  easy  preparation of input datasets, running simulations, and
displaying model outputs.


Model Features
    •    Field and watershed-scale analysis
    •    Simulates the hydrology of poorly drained, high water table soils
    •    Simulates nitrogen and salinity transport
    •    Models the performance of water table management systems
    •    The graphical user interface


Model Areas Supported
Watershed              Medium to High
Receiving Water         None
Ecological              None
Air                    Low
Groundwater            Low
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                                                                            Appendix A: Model Fact Sheets
Model Capabilities

Conceptual Basis
DRAINMOD is based on one-dimensional water balance in the soil profile and uses long duration weather data to
simulate the performance of drainage systems. The model was developed specifically for shallow water table, poorly
drained soils. The model avoids the complex numerical methods by using approximate  methods to quantify the
hydrologic components, including subsurface  drainage, subirrigation, infiltration,  evapotranspiration (ET),  and
surface runoff.  For example,  subsurface drainage is computed using the Houghoudt equation, which assumes an
elliptical water  table  shape. The change in water table depth is based on the assumption that the soil water profile
above the water table is drained to equilibrium with the water table.

Hourly rainfall  is used to compute infiltration using a modified Green-Ampt  method. Excess  rainfall fills surface
storage and any  remaining rainfall  is  considered  runoff.  Evapotranspiration is computed  from  potential
evapotranspiration as limited by soil water availability. Actual evapotranspiration is the amount that can be supplied
from the water table plus the amount available from the unsaturated zone.

DRAINMOD version 5.1 is also linked to a one-dimensional nitrogen cycling model  (Breve et al., 1997a and b).
The model uses the water balances and fluxes from hydrology as inputs to a one-dimensional advective-dispersive-
reactive equation for nitrogen fate and transport. The model uses nitrate as the main pool for the  simplification of the
nitrogen  cycle. The nitrogen  balance  considers  fertilizer  dissolution,  mineralization  of organic  nitrogen,
denitrification, and plant uptake using first order rate equations.


Scientific Detail
The major process of the model is a water balance for the soil profile. The water balance for a time increment of At
is expressed as,

AV = D + ET + DS - F

Where AV is the change in the volume (cm), D is lateral drainage (cm) from the section,  ET is evapotranspiration
(cm), DS is deep seepage (cm),  and F is infiltration (cm) entering the section during time interval At. All of the
right-hand side  terms are computed in terms of the water table elevation, soil water content, soil properties, site and
drainage system parameters, and atmospheric conditions.

The amount of  runoff and storage on the surface is computed from a water balance at the soil surface for each time
increment as,

P = F + AS + RO

Where P is the  precipitation (cm), F is infiltration (cm),  AS is the change in volume of water stored on the surface
(cm), and RO is runoff (cm) during time interval At.


Model Framework
    •   Version 5.1  includes a user interface written in Visual Basic  6.0 and combines  the different versions of
        DRAINMOD (Hydrology, Nitrogen, and Salinity). Following are the model components:
            o   Precipitation (hourly data)
            o   Infiltration (the Green-Ampt equation)
            o   Surface drainage (the average  depth of depression storage)
            o   Subsurface drainage (the rate of subsurface water movement into drain ditches)
            o   Subirrigation (lateral flow)
            o   Evapotranspiration
            o   Soil water distribution
            o   Rooting depth
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Scale

Spatial Scale
    •   Watershed and field level


Temporal Scale
    •   Hourly and daily


Assumptions
    •   Assumes an elliptical water table shape
    •   Assumes subsurface drains are parallel
    •   Drains the soil water profile above the water table to equilibrium with the water table


Model Strengths
    •   Simulates surface and subsurface water flows in response to water management systems in soils with high
        water tables
    •   Compares and evaluates the effectiveness of the design over a range of weather scenarios


Model Limitations
    •   Supports only parallel subsurface drains
    •   Should not be applied to situations that are widely different than conditions for which it was developed,
        without further testing


Application History
DRAINMOD reference report (Skaggs, 1980) presented these four sets of model application examples:

    1.  Combination surface-subsurface drainage systems
    2.  Subirrigation and controlled drainage
    3.  Irrigation of waste water on drained lands
    4.  Effect of root depth on the number and frequency of dry days

In addition to hydrology of DRAINMOD, the nitrogen and salinity portions of the model have been tested by Breve
et al.  (1997b), Kandil et al. (1995), and Merz and Skaggs (1998). Other field testing is currently ongoing for these
versions of the model.


Model Evaluation
The reliability of DRAINMOD has been tested for a wide range of soil, crop, and weather conditions. Results of
tests in North Carolina (Skaggs, 1982), Ohio (Skaggs et al.,  1981), Louisiana (Fouss et al., 1987), and Virginia
(McMahan et al.,  1988) indicate that the model can be used to reliably predict water table elevations and drain flow
rates.


Model Inputs
    •   Soil property inputs
    •   Hydraulic conductivity
    •   Soil water characteristics
    •   Drainage volume - water table depth relationship
    •   Upward flux
    •   Green-Ampt equation parameters
    •   Crop input data
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    •   Drainage system parameter
    •   Surface drainage
    •   Effective drain radius


Users' Guide
Available online: http://www.bae.ncsu.edu/soil water/drainmod/index.htm


Technical Hardware/Software Requirements

Computer hardware:
    •   PC


Operating system:
    •   Microsoft Windows 95/98/2000/N17XP.


Programming language:
    •   Visual Basic and FORTRAN


Runtime estimates:
    •   Minutes to less than 1 hour


Linkages Supported
The original DRAINMOD hydrology  model has been modified to include submodels on the fate and transport of
nitrogen in the soil and salinity. Following are the models developed at the Biological and Agricultural Engineering
Department at NCSU.

    •   DRAINLOB: DRAINMOD-based field-scale forest hydrologic model
    •   DRAINMOD-S: DRAINMOD-based field-scale model for predicting salinity on arid/semi-arid lands
    •   DRAINMOD-N: DRAINMOD-based field-scale model for predicting Nitrogen from agricultural lands
    •   WATGIS:  A GIS-based lumped parameter watershed-scale hydrology  and  water  quality  model.
        DRAINMOD and DRAINMOD-N models coupled with a delivery ratio routine to route drainage water and
        nutrients to the watershed outlet
    •   DRAINMOD-GIS: A GIS-based lumped parameter watershed-scale hydrology and water quality model.
        DRAINMOD/DRAINMOD-N models coupled with  a simplified water and nutrient fate and transport
        submodels
    •   DRAINMOD-W:  A  watershed-scale  model based  on DRAINMOD  and  DRAINMOD-N field-scale
        submodels with a finite difference canal routing model and a finite element solute transport submodel


Related Systems
DRAINMOD supports several numerical models as listed in Linkage Supported section.


Sensitivity/Uncertainty/Calibration
The results for the sensitivity  analyses conducted for different soils and water management systems of North
Carolina are presented in DRAINMOD  reference report (Skaggs, 1980).  This report indicated that hydraulic
conductivity (K) is a very  sensitive parameter in this model. Similarly, SEW-30 (Sum of Excess Water for water
table depths greater than 30 cm) was more sensitive to errors in K and PET than to any of the other input parameters.

The number of dry days (days in which actual ET is less than PET) were less dependent on K than either working
days (a day is counted as a working day if the drained or water free pore space  is greater than a threshold value) or
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SEW-30 for all cases evaluated. Dry days were also reported to be quite sensitive to errors in the water content at the
lower limit (wilting point).


Model Interface Capabilities
    •   A graphical user interface for assisting the user in developing input datasets
    •   Options to enable the user to analyze the model results graphically
    •   No GIS interface available for the latest  version of the model, but watershed and drainage basin scale
        versions are currently under development,  which utilize ARC Info and ARCView to assist in model setup
        and analysis of results


References
Breve, M. A., R. W. Skaggs, J. E. Parsons and J. W. Gilliam. 1997a. DRAINMOD-N: A nitrogen model for
artificially drained lands. Trans. ASAE. 40(4): 1067-1075.

Breve, M. A., R. W. Skaggs, J. W. Gilliam, J. E. Parsons, A. T. Mohammad, G. M. Chescheir and R. O. Evans.
1997b. Field testing of DRAINMOD-N. Trans. ASAE. 40(4):1077-1085.

Fouss, J. L., R. L. Bengston and C.  E. Carter. 1987. Simulating subsurface drainage in the lower Mississippi Valley
withDRAINMOD. Trans. ASAE. 30(6): 1679-1688.

Kandil, H. M., R. W. Skaggs, S. A. Dayem and Y. Aiad. 1995. DRAINMOD-S: A water management model for
irrigated arid lands, crop yield and applications. Irrigation and Drainage Systems. 9(3):239-258.

McMahon, P.  C., S. Mostaghimi and F. S. Wright. 1988. Simulation of corn yield by a water management model for
a Coastal Plain soil in Virginia. Trans. ASAE. 31(3):734-742.

Merz, R. D. and R. W. Skaggs. 1998. Application of DRAINMOD-S to Determine  Drainage Design Criteria for
Irrigated Semi-Arid Lands. In Proceedings of Seventh International Drainage Symposium Drainage in the 21st
Century: Food Production and the Environment, Ed. Larry C. Brown, American Society of Agricultural Engineers,
Orlando, Florida, March 8-10, 1998, pp. 347-354.

Skaggs, R.W.  1980.  DRAINMOD Reference Report - Methods for design and evaluation of drainage-water
management systems for soils with high water tables. USDA SCS, South National Technical Center Texas.

Skaggs, R. W., N. R. Fausey and B. H.  Nolte.  1981. Water management model evaluation for North Central  Ohio.
Trans. ASAE. 24(4): 922-928.

Skaggs, R. W. 1982. Field evaluation of a water management model, DRAINMOD. Trans. ASAE. 25(3): 666-674.
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                                                                         Appendix A: Model Fact Sheets
                   DWSM - Dynamic Watershed Simulation Model


Contact Information
Deva K. Borah
Illinois State Water Survey
2204 Griffith Drive
Champaign, Illinois 61820
borah@uiuc. edu


Download Information
Availability: Non-Proprietary
Cost: Free


Model Overview/Abstract
Developed by the Illinois State  Water Survey, the DWSM (Borah et al., 2002; Borah and Bera,  2003)  uses
physically based governing equations to simulate surface and subsurface storm water runoff, propagation of flood
waves, soil erosion, and entrainment and transport of sediment and agricultural chemicals in agricultural watersheds
during severe rainfall events. The model has three major components: (1) DWSM-Hydrology (Hydro) simulating
watershed hydrology, (2) DWSM-Sediment (Sed) simulating soil erosion and sediment transport, and (3) DWSM-
Agricultural  chemical  (Agchem) simulating agricultural  chemical (nutrients  and pesticides)  transport.  Each
component has routing schemes developed using approximate analytical solutions of the physically based equations
preserving the  dynamic behaviors  of water, sediment, and the accompanying chemical movements  within a
watershed.


Model Features
    •    Agricultural watershed, nonpoint sources
    •    Distributed,  single event model
    •    Spatially varying rainfall inputs
    •    Individual hyetograph for each overland
    •    Rainfall excess, surface and subsurface overland flow
    •    Surface erosion and sediment transport
    •    Agrochemical mixing and transport
    •    Channel erosion and deposition and routing of flow,  sediment, and agrochemical and flow routing through
        reservoirs
    •    Detention basins, alternative ground covers, and tile drains


Model Areas Supported
Watershed              Medium
Receiving Water Low
Ecological              None
Air                    None
Groundwater            None
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Model Capabilities

Conceptual Basis
The watershed is divided into subwatersheds, specifically, into one-dimensional overland  elements,  channel
segments, and reservoir units. An overland element is represented as a rectangular area with the same area as in the
field, width equal to the adjacent  (receiving)  channel  length,  length equal  to  area divided by  the width, and
representative  slope, soil, cover, and roughness based  on physical  observations of these characteristics in the
element. A channel segment is represented with a straight channel having the same length as in the field and having
a representative cross-sectional shape, slope, and roughness based on physical observations and measurements. A
reservoir unit is represented with a stage-storage-discharge relation (table) developed based on topographic data and
discharge calculations using outlet measurements and established relations.


Scientific Detail

The DWSM-Hydro: Hydrologic Simulations
The overland elements  are the primary sources of runoff in which rainfall turns into surface runoff after losing first
to interception at canopies and ground covers, then to infiltration through the ground surface and depression storage
above it. The  rainfall available for  surface runoff is the rainfall excess. A portion of the infiltrated  water flows
laterally towards downstream as subsurface flow sometimes in accelerated mode in the presence of tile  drains. Two
overland elements contribute surface and subsurface flows into one channel segment laterally from each side of the
channel. The excess rainfall is routed over the overland elements beginning  at their upstream edges (ridges), at
which  flows are  zeros,  to  their downstream  edges, coinciding with  the receiving channel  banks.  Similarly,
subsurface water from  infiltration is routed through the soil matrix underneath the overland elements beginning at
their upstream edges (ridges), at which flows are assumed zeros, to their downstream edges, coinciding with the
receiving channel banks.  Currently, the tile drain flows from overland elements having tile drains are lumped with
the  subsurface flow through the soil matrix using an effective lateral saturated hydraulic conductivity concept. The
channel segments carry the receiving waters from overland elements and upstream channel segments  towards the
downstream side of the watershed and ultimately to the watershed outlet. During its journey, the runoff water may
be intercepted by reservoirs, which release it again to downstream channels at reduced rates after temporary storage.


The DWSM-Sed: Soil  Erosion and Sediment Transport Simulations
Similar to the hydrologic  component, soil erosion and sediment transport are simulated along with water through the
overland elements and  stream segments. The eroded soil  or sediment is divided into number of particle  size groups.
Agricultural watersheds having extensive aggregates, the sediment is divided into five size groups: sand, silt, clay,
small aggregate, and large aggregate. Each size group is dealt  individually during the simulation of each of the
processes, and total response, in the form of sediment concentration and discharge is obtained by integrating the
responses from all the size groups.

The model computes soil  erosion due to raindrop impact. The eroded (detached) soil is added to an existing detached
(loose) soil depth from  where entrainment to runoff takes place with sufficient velocity and shear (capacity). Erosion
due to  flow shear stress and deposition depends on sediment transport capacity of the flow  and the sediment load
(amount of sediment already  carried by the flow).  Sediment transport capacity is computed using established
formulas. If the capacity is higher than the sediment load, erosion takes place and the flow picks up more materials
from the bed.  If the loose soil volume at the bed is sufficient, sediment entrainment takes place from the detached
soil depth. Otherwise, the flow erodes additional soil from the parent bed material.  If the sediment transport capacity
is lower than the sediment load, the flow is in a deposition  mode and the potential rate of deposition is equal to the
difference of the  two.  The actual rate of deposition is  computed by  taking  into account particle fall velocities.
Deposited sediment is added to the loose soil volume. If the sediment transport capacity and the sediment load are
equal, an equilibrium condition is assumed where there is neither erosion nor deposition. All the above processes are
interrelated and must  satisfy  locally the  conservation  of sediment mass  principle  expressed by the sediment
continuity equation. The continuity equation is solved to  keep track of erosion, deposition, and sediment discharges
along the flow segments.
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The DWSM-Agchem: Agricultural Chemical Transport Simulations
The agricultural chemical transport component of DWSM involves simulations of mixing of nutrients and pesticides
and transport of these chemicals with surface runoff in dissolved form, and with sediment in adsorbed form in each
of the flow segments. Similar to the hydrologic and soil erosion-sediment transport components, these processes are
simulated along with water and sediment through the overland elements and stream or channel segments.

The model assumes equilibrium between dissolved and adsorbed phases of the chemicals, governed by a  linear
adsorption  isotherm. The  soil profile is divided into small homogeneous soil increments. The model  routes
infiltrating  rainwater and solutes through the  soil increments and computes resulting water contents and chemical
concentrations. When runoff begins, exchange of chemicals from a mixing soil layer of the soil profile, containing
the  chemicals in dissolved form, with surface runoff are simulated using the concept of non-uniform  mixing of
runoff with the mixing soil layer. Exchange of chemicals in adsorbed forms with the eroded and deposited sediments
is computed based on preference factors of the individual size groups.  The entrained chemicals are routed  along
slope  lengths in dissolved form with surface runoff and in adsorbed form with the transported sediment  using
solutions of the continuity (mass conservation) equations.


Model Framework
The watershed  is  divided into subwatersheds, specifically, into  one-dimensional  overland elements, channel
segments, and  reservoir units. Overland elements  are  spatially distributed.  Modules  are  linked  to calculate
hydrology, erosion and sediment transport, and agricultural chemical transport.


Scale

Spatial Scale
    •   Watersheds of  sizes ranging from  few acres  to  several hundred square  kilometers are divided into
        hydrologic units defined by topographical or natural boundaries and further divided into overland, channel,
        and reservoir segments.


Temporal Scale
    •   Several days of storm events divided into constant time intervals ranging from few minutes to few hours


Assumptions
    •   Uses kinematic wave equation assuming that  all the  acceleration and pressure gradient terms in  the
        momentum equation can be ignored
    •   Assumes equilibrium  between dissolved and adsorbed phases of  the chemicals, governed by a  linear
        adsorption isotherm.
    •   Assumes all sediment are trapped in reservoir and no downstream discharge


Model Strengths
    •   Is a distributed model (overland elements)
    •   Detailed and  physically-based model  yet  relatively efficient, provides a balance  between the simple
        (lumped) and complicated (computationally intensive) models
    •   Suitable for flat Midwestern watersheds with extensive tile-drained lands
    •   Is capable of evaluating the effects of some BMPs, such as detention basins, alternative ground covers, and
        tile drains


Model Limitations
    •   Only used to simulate single event
    •   Only for agricultural watersheds
    •   One-dimensional channel simulation (no ecological processes)
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                                                                           Appendix A: Model Fact Sheets
Application History
The DWSM-Hydro was applied and tested on the Upper Sangamon River basin draining a
2,400-km2 agricultural watershed to Lake Decatur in Illinois (Borah et al, 1999, 2000). Lake
Decatur is a public water supply reservoir for the City of Decatur having a history of high nitrate nitrogen
(nitrate-N) concentration,  periodically exceeding 10 milligrams per liter (mg/L), and violating state and national
drinking water standards.  The lake also has a high sedimentation rate that is gradually reducing its water supply
capacity. The goal is to use the model to evaluate the benefits of applying alternative land use and BMPs in reducing
soil erosion, and sediment and agricultural chemical discharges into the lake and help solve the water quality and
sedimentation problems.

The DWSM-Hydro & Sed were applied and tested (calibrated and validated) on the Big Ditch watershed using data
monitored during 1998 spring and early summer storm events (Borah et al.,  1999; Borah et al., 2001). Big Ditch is a
tributary to the Upper Sangamon River draining 100-km2 agricultural lands.  In this application, scaling effects on
model parameters and water and sediment discharges resulting from watershed divisions with alternative subdivision
sizes were investigated. The DWSM-Agchem was also applied and tested  on the Big Ditch watershed (Xia et al.,
2001) and preliminary results indicated that the model needed improvements in simulating agricultural chemicals,
especially nitrate-N.

The DWSM-Hydro was applied to the Court Creek watershed in Illinois (Borah and Bera, 2000a,b). This 251-km2
watershed is part of the Illinois multi-agency Pilot Watershed and Conservation Reserve Enhancement Programs.
The DWSM-Hydro was calibrated and validated  using storm data monitored and reported earlier by the  ISWS
(Roseboom et al.,  1982, 1986).  The model was then run for design storms and high, moderate, and low runoff
potential areas of the watershed were identified and ranked.  The committee is currently using these results to plan
their initial  restoration programs  within the  watershed. It  has been realized that the design storms with Soil
Conservation Service's (SCS) rainfall distributions generated unrealistically high flows for BMP design purposes.
Therefore, rankings of overland elements and channel segments have been revised using a historical storm occurred
in the springtime. Rankings are based on unit-width peak flows and unit-width sediment yields for the overland
elements and on peak flows and sediment yields for the channel segments.


Model Evaluation
The model developers has conducted many studies to evaluate the model (see Model Application History)


Model Inputs
    •   Physical  data representing  the  watershed,  initial  moisture,   soil  and  agricultural  chemicals  and
        meteorological data representing the rainfall events


Users' Guide
Contact the authors for documentation


Technical Hardware/Software Requirements

Computer hardware:
    •   PC


Operating system:
    •   PC-DOS or Windows system with FORTRAN complier
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                                                                         Appendix A: Model Fact Sheets
Programming language:
    •   FORTRAN


Runtime estimates:
    •   > Minutes


Linkages Supported
None


Related Systems
None


Sensitivity/Uncertainty/Calibration
Sensitive to runoff curve number,  saturated  hydraulic conductivity,  Manning's roughness coefficient, flow
detachment  coefficient,  chemical  partition  coefficient,  chemical  mixing parameter,  sediment  particle  size
distribution, and rainfall intensities and their temporal distributions

Calibration parameters include runoff curve number or saturated hydrological conductivity, Manning's roughness
coefficient, flow detachment coefficient, chemical partition coefficient, and chemical mixing parameter


Model Interface Capabilities
Not available.


References
Borah, O.K.  and M. Bera. 2000a. Hydrologic Modeling of the Court Creek Watershed. Contract Report 2000-04,
Illinois State Water Survey, Champaign, IL.

Borah, D.K. and M. Bera. 2000b. Watershed modeling with state and local partners in Illinois. In Proceedings of the
2000 Joint Conference on Water Resources Engineering and Water Resources Planning & Management, ed. R.H.
Hotchkiss and M. Glade, ASCE-EWRI, Reston, VA: CD-ROM.

Borah, D.K. and M. Bera. 2003. Watershed-scale hydrologic and nonpoint-source pollution  models: Review of
mathematical bases. Transactions of the ASAE. 46: 1553-1566

Borah, D.K., M. Bera, S. Shaw, and L. Keefer.  1999. Dynamic Modeling and Monitoring of Water, Sediment,
Nutrients, and Pesticides in Agricultural Watersheds during Storm Events. Contract Report 655, Illinois State Water
Survey, Champaign, IL.

Borah, D.K., R. Xia, and M. Bera. 2000. Hydrologic and water quality model for tile drained watersheds in Illinois.
ASAE Paper No. 002093, St. Joseph, Mich.: ASAE.

Borah, D.K, R. Xia, and M. Bera. 2001. Hydrologic and Sediment Transport Modeling of Agricultural Watersheds.
In Proceedings of the World Water & Environmental Resources Congress, ed. D.  Phelps and G. Sehlke, ASCE-
EWRI, Reston, VA: CD-ROM.

Borah, D. K., R. Xia, and M.  Bera. 2002.  DWSM - A  dynamic  watershed  simulation model.  Chapter 5 in
Mathematical Models of Small Watershed Hydrology and Applications, ed. V. P. Singh and D. K. Frevert, pp. 113-
166. Highlands Ranch, CO: Water Resources Publications.
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                                                                          Appendix A: Model Fact Sheets
Roseboom, D., R.L. Evans, J.  Erickson, and L.G. Brooks. 1982. An Inventory  of Court Creek Watershed
Characteristics that may Relate to  Water Quality in the Watershed.  Contract Report 322, Illinois State Water
Survey, Champaign, IL.

Roseboom, D., R.L. Evans, J. Erickson, L.G. Brooks, and D. Shackleford. 1986. The Influences of Land  Uses and
Stream Modifications on  Water Quality in the Streams of the Court Creek Watershed. ILENR/RE-WR-86/16,
Illinois Department of Energy and Natural Resources,  Springfield, IL.

Xia, R., D.K. Borah, and M. Bera. 2001. Modeling Agricultural Chemical Transport in Watersheds. In Proceedings
of the World Water & Environmental Resources Congress, ed. D. Phelps and G. Sehlke, ASCE-EWRI, Reston, VA:
CD-ROM.
                                                 190

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                                                                      Appendix A: Model Fact Sheets
   ECOMSED: Estuary and Coastal Ocean Model with Sediment Transport


Contact Information
HydroQual, Inc.
One Lethbridge Plaza
Mahwah, NJ, 07430
(201)529-5151
Ecom support(@,hvdroqual. com
http://www.hvdroqual.com/ehst ecomsed.html


Download  Information
Availability: Nonproprietary Version Available
Register to download files: http://www.hvdroqual.com/ehst ecomsed.html
Cost: N/A


Model Overview/Abstract
ECOMSED is a three-dimensional hydrodynamic and sediment transport model. The hydrodynamic module solves
the conservation of mass and momentum equations  with a 2.5-level turbulent closure  scheme  on  a curvilinear
orthogonal grid in horizontal plane and  o-coordinate in the vertical direction. Water  circulation,  salinity, and
temperature are obtained from the hydrodynamic module. The sediment transport module computes  the sediment
settling and resuspension processes for both cohesive and noncohesive sediments under  the impact of waves and
currents. The  hydrodynamic component is same as the ECOM3D/POM model.


Model Features
    •   Three-dimensional hydrodynamics
    •   Cohesive and noncohesive sediment transport
    •   Sediment-bound and dissolved tracer transport
    •   Wind-waves-generated shear stress


Model Areas Supported
Watershed             None
Receiving Water        High
Ecological             None
Air                   None
Groundwater           None


Model Capabilities

Conceptual  Basis
The waterbody is conceptualized as a series of grid points on a curvilinear orthogonal coordinate system.


Scientific Detail
The governing equations of the hydrodynamic component in ECOMSED  are the continuity equation, Reynold's
equations,  heat and salinity  transport equations on curvilinear-orthogonal  grid on the horizontal plane and
o-coordinate  in the vertical direction. It uses a 2.5-level turbulence closure scheme that solves the transport  of
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                                                                          Appendix A: Model Fact Sheets
turbulent kinetic energy and turbulent macroscale. The governing equation of sediment transport is an advection-
dispersion equation that uses the hydrodynamic results. The hydrodynamic governing equations are solved using a
mode-splitting technique. The external mode that contains fast moving gravity wave is solved with small timesteps
to ensure stability, whereas the internal mode uses large timesteps to save the computation time. Finite difference of
the  differential equation is applied on a staggered C grid in space, and the three-time-level leap-frog scheme is
applied for  the  timestepping.  Three  schemes, including central difference,  upwind difference,  and  the
multidimensional positive definite advection scheme  are provided in the model to solve the advection term in the
transport equations. The sediment transport component uses the same grid, structure, and computational framework
as the hydrodynamic  component to simulate  the settling,  deposition, and resuspension of both cohesive  and
noncohesive sediments. The Grant-Madson wave-current model is incorporated in ECOMSED to account for wind-
wave-generated shear stress.


Model Framework
    •   Three-dimensional model
    •   River, lake, reservoir, estuary, ocean


Scale

Spatial Scale
    •   One-, two-, and three-dimensional


Temporal Scale
    •   User-defined timestep


Assumptions
    •   Hydrostatic assumption
    •   Boussinesq approximation
    •   Reynold's stress assumption


Model Strengths
    •   ECOMSED is capable of modeling one-, two-, and three-dimensional hydrodynamics in various water
        bodies with complex bathymetry.
    •   The boundary-fit curvilinear coordinate can represent the waterbody boundaries accurately with fewer grids
        than Cartesian coordinate.
    •   The vertical o-coordinate represents the bathymetry without assuming rectangular bottom boundary.


Model Limitations
    •   The vertical o-coordinate may cause significant pressure gradient error at areas with sharp bottom elevation
        change.
    •   Timestep and grid size need to be chosen carefully to balance the computation time and model resolution
        and ensure model stability.


Application History
ECOMSED has been applied to  Chesapeake Bay, New York Bight, Delaware Bay, Delaware River, Gulf Stream
Region, Massachusetts Bay, Georges Bank, the Oregon Continential Shelf, New York Harbor, and Onondaga Lake.


Model Evaluation
The hydrodynamic component of ECOMSED is based on  Princeton Ocean Model,  which has  been  tested  and
applied by various users. The theory and model testing history can be found in journal and conference papers.
                                                  192

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                                                                   Appendix A: Model Fact Sheets
Model Inputs
    •   Initial conditions
    •   Bathymetry and waterbody boundaries
    •   Physical coefficients
    •   Water surface elevations or flow rate at open boundary
    •   Time sequences of hydrometeorological conditions


Users' Guide
Available online (after registering): http://www.hvdroqual.com/ehst ecomsed.html


Technical Hardware/Software Requirements

Computer hardware:
    •   PC, workstation, and mainframe


Operating system:
    •   PC-DOS, Unix, Windows


Programming language:
    •   FORTRAN


Runtime estimates:
    •   Minutes to hours


Linkages Supported
Linked with HydroQual's RCA model.


Related Systems
POM, EFDC, CH3D, GLLVHT


Sensitivity/Uncertainty/Calibration
Not available


Model Interface Capabilities
Input file in text format.


References
HydroQual, Inc.  2002. A Primer for ECOMSED version 1.3. (Computer program manual). HydroQal, Inc., Mahwah,
NJ.
                                             193

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                                                                        Appendix A: Model Fact Sheets
                     EFDC: Environmental Fluid Dynamics Code


Contact Information
John M. Hamrick
Tetra Tech, Inc.
10306 Eaton Place, Suite 340
Fairfax, VA 22030
(703) 385-6000
j ohn. hamrick(@,tetratech-ffx.com

Virginia Institute of Marine Science
School of Marine Science
The College of William and Mary
Gloucester Point, VA 23052
(804) 642-7000


Download Information
Availability: Nonproprietary
Cost: N/A


Model Overview/Abstract
The EFDC model is single-source-code three-dimensional modeling system having hydrodynamic, water quality-
eutrophication, sediment transport, and toxic contaminant transport components transparently linked together. The
model  can execute  in  a fully coupled  mode, simultaneously simulating hydrodynamics and sediment and
contaminant transport, or in a transport-only mode, using saved hydrodynamic transport information. The EFDC
model  uses a finite difference  spatial representation and is capable of reduced  dimension execution in one-
dimensional network and two-dimensional (horizontal or vertical plane) modes. Water column transport includes
three-dimensional advection and vertical and horizontal turbulent diffusion. Shear dispersion may be included for
two-dimensional horizontal applications.  A water quality-eutrophication model, functionally equivalent to  CE-
QUAL-IC, is also incorporated into EFDC (Hamrick and Wu, 1997; Park, et al., 1995). The model can be applied to
rivers, lakes, reservoirs, estuaries, wetlands, and coastal regions.


Model Features
    •   General purpose three-dimensional hydrodynamic and transport model
    •   Model simulates tidal, density, and wind-driven flow; salinity; temperature; and sediment transport
    •   Two built-in, fully coupled water quality/eutrophication submodels are included in the code, as well as a
        toxicant transport and fate model


Model Areas Supported
Watershed              Low
Receiving Water        High
Ecological              High
Air                    None
Groundwater            Low
                                                194

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                                                                             Appendix A: Model Fact Sheets
Model Capabilities

Conceptual Basis
The EFDC model  solves the vertically hydrostatic, free-surface, variable-density, turbulent-averaged equations of
motion and transport equations for turbulence intensity and length scale, salinity, and temperature in a stretched,
vertical  coordinate system and  in horizontal coordinate systems that may be Cartesian or curvilinear-orthogonal.
Equations describing the transport of suspended sediment, toxic contaminants, and water quality state variables are
also  solved.  Multiple size classes  of cohesive  and noncohesive  sediments and associated  deposition  and
resuspension processes and bed geomechanics are simulated. Toxics are transported in both the water and sediment
phases in the water column and bed. The built-in 21-state-variable water quality model is based on the CE-QUAL-
ICM reaction kinetic. A 10-state-variable reduced water quality model is functionally equivalent to WASPS. Other
model features include drying and wetting, hydraulic structure representation, vegetation resistance, and Lagrangian
particle  tracking. The model  also accepts radiation stress fields from wave refraction-diffraction models, which
allows simulation of longshore currents and sediment transport.


Scientific Detail
The EFDC model framework includes methods for computing hydrodynamics, mixing zone dilution, eutrophication,
sediment transport, and toxic contaminant transport.


Mixing Zone
A Lagrangian buoyant jet near-field dilution and mixing-zone model is embedded within the far  field solution
allowing representation of the  local distribution of contaminated sediment near point sources.


Hydrodynamic
EFDC uses a finite difference scheme with three time levels and an internal-external mode splitting procedure to
achieve  separation  of the internal shear or baroclinic mode from the external free-surface gravity wave or barotropic
mode. An implicit external mode solution  is used with simultaneous computation of a  two-dimensional surface
elevation  field by a multicolor  successive overrelaxation  procedure. The external solution is  completed by
calculation of the depth-integrated barotropic velocities using the new surface elevation field.  Various options can
be used for advective transport in EFDC. These include the "centered in time and space" scheme, and the "forward
in time and upwind in space" scheme.


Sediment Transport
The sediment transport component simulates a user specified number of size classes of cohesive and noncohesive
sediment.  Sediment settling is represented by concentration and ambient-flow-turbulence-dependent formulations to
represent hindered  settling of noncohesive sediment and approximately represent aggregation and disaggregation of
cohesive sediment. Water column-bed sediment and sorbed contaminant exchange is represented by deposition and
erosion fluxes. For noncohesive sediment,  the net flux is represented as dependent on the bed stress, the near bottom
and bed surface sediment concentration, and the critical Shield's parameter. For cohesive  sediment, deposition and
erosion fluxes  are dependent on the bed stress, critical deposition and erosion stresses, and the  shear strength of the
bed. The sediment bed is represented by a time varying number of layers. Sediment in each layer is characterized by
mass per unit area, void ratio, and shear strength. The void ratio, of the layers is specified or determined by a bed
consolidation model with shear strength being determined as a function of void ratio.


Contaminant  Transport
Vertical transport of sediment and sorbed contaminants between bed layers is implicitly  represented by sediment
particle  displacement in response to layer  thickness variations dynamically determined by  the consolidation model.
Transport of dissolved contaminants between the water column and bed and between bed layers includes pore water
advection, dynamically determined by the bed consolidation model and pore water diffusion. An arbitrary number of
toxic contaminants can be simultaneously transported.  The simple  contaminant  processes  option includes constant
coefficient equilibrium partitioning, volatilization, and lumped first-order decay with unique coefficients for the
water column and sediment  bed. The complex contaminant processes option allows for solids-concentration-
                                                   195

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                                                                           Appendix A: Model Fact Sheets
dependent partitioning and specification of ambient-environment-dependent volatilization, hydrolysis, photolysis,
oxidation, and biodegradation reactions specific to the contaminants being simulated.


Ecosystem
The model is based on the  CE-QUAL-ICM and incorporates a predictive  sediment process or diagenesis  model
(DiToro and Fitzpatrick, 1993). The eutrophication model is directly coupled to the hydrodynamic model  and is
capable of two and three-dimensional spatial resolution.  Water column state variables include up to three algae
classes  represented in carbon equivalent units,  ammonia,  nitrite-nitrate, organic nitrogen, orthophosphate or
inorganic phosphorous, organic phosphorus, organic carbon, chemical oxygen demand, dissolved oxygen, available
and unavailable  silica, and  total active metal,  which is  used  as a  sorption site. Organic carbon, nitrogen,  and
phosphorous  are subdivided into  three classes: dissolved, labile paniculate, and refractory paniculate.  Model
variables in the sediment bed include paniculate organic carbon, nitrogen, and phosphorous, each in three reaction
rate classes; paniculate and available silica; sulfide or methane;  ammonia; nitrate; inorganic phosphorus; bed-water
column fluxes of ammonia, nitrate, inorganic phosphorous and silica; sediment oxygen demand; and release of
chemical oxygen demand. The model's formulation allows  direct determination of organic carbon levels in the water
column and sediment bed.


Model Framework
    •   Three-dimensional curvilinear-orthogonal finite difference


Scale

Spatial Scale
    •   Three-dimensional


Temporal Scale
    •   Dynamic


Assumptions
    •   Based  on accepted formulations  of  the  three-dimensional  hydrostatic  hydrodynamic  equations  and
        conservative transport equation


Model Strengths
    •   Completely integrated three-dimensional hydrodynamics,  water  quality/eutrophication,  and sediment-
        contaminant transport


Model Limitations
    •   Requires considerable technical expertise in hydrodynamics to use the model effectively
    •   Requires expertise in eutrophication processes to use the water quality component


Application History
The EFDC model has been  used for modeling studies in  the estuaries of the Chesapeake Bay System, the  Indian
River Lagoon and Lake Okeechobee in Florida, the Peconic Bay System in New York, Stephens Passage in Alaska,
and Nan Wan Bay in Taiwan. The model has also been used to  simulate large-scale wetlands flow and transport in
the Everglades. The EFDC model has been applied extensively for circulation,  discharge dilution,  and water
quality/eutrophication studies (Hamrick,  1992b; Tetra Tech, 1994, 1995, 1998). The model has also been applied for
estuarine-cohesive sediment transport simulation (Yang, 1996), and coastal noncohesive sediment transport (Zarillo
and Surak, 1995), and heavy metals and organic contaminant transport (Schock and Hamrick, 1998).
                                                  196

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                                                                      Appendix A: Model Fact Sheets
Model Evaluation
    •   Not available


Model Inputs
    •   Open boundary water surface elevation
    •   Wind and atmospheric thermodynamic conditions
    •   Open boundary salinity and temperature
    •   Volumetric inflows
    •   Inflowing concentrations of sediment and water quality state variables
    •   Input file templates are included with the source code and the user's manual to aid in input data preparation


Users' Guide
    •   Contact the developer at john.hamrick(g),tetratech-ffx.com.


Technical Hardware/Software Requirements

Computer hardware:
    •   PC, Macintosh, Unix workstation, Super computer


Operating system:
    •   Windows, Mac OS, Unix, Linux


Programming language:
    •   FORTRAN


Runtime estimates:
    •   Can be computation intensive but is highly optimized and has faster documented runtime than similar
        software systems
    •   Runtime  is highly dependent on computer hardware, model domain spatial resolution,  the period of
        prototype  conditions  simulated, and  other options, such as whether the model is simulation-only
        hydrodynamic or hydrodynamics and the fate and transport of dissolved and suspended material; under this
        wide range of variability, simulations could require minutes to weeks


Linkages  Supported
    •   Linkages to WASP, CE-QUAL-ICM, RCA, and a generic output for food chain and risk assessment model


Related Systems
GridEFDC, EFDCexplorer, EFDCview, EPA TMDL Toolbox


Sensitivity/Uncertainty/Calibration
Not available


Model Interface Capabilities
    •   Public domain GUI including EFDCexplorer and EFDCview
                                               197

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                                                                           Appendix A: Model Fact Sheets
References
Hamrick,  J.M.  1992.  A  three-dimensional environmental fluid dynamics  computer  code:  theoretical  and
computational aspects. SRAMSOE #317. The College of William and Mary, Gloucester Point, VA.

Hamrick,  J. M.  1992. Estuarine  environmental impact  assessment using a  three-dimensional  circulation and
transport model. In Proceedings of the  2nd International  Conference  Estuarine Coastal Modeling, ed. M. L.
Spaulding et al., American Society of Civil Engineers, New York, 1992, pp. 292-303.

Park, K., A. Y. Kuo, J. Shen, and  J. M. Hamrick. 1995. A three-dimensional hydrodynamic-eutrophication model
(HEM3D): description  of water quality and sediment processes submodels.  Special Report 327.  The College of
William and Mary, Virginia Institute of Marine Science, Gloucester Point, VA.

Hamrick, J. M. 1994. Linking hydrodynamic and biogeochemcial transport models for estuarine and coastal waters.
In Proceedings of the 3rd International Conference Estuarine and Coastal Modeling, ed. M. L.  Spaulding et al.,
American Society of Civil Engineers, New York, 1994, pp. 591-608.

Fredricks, C.,  and J.  M. Hamrick.  1996. The effect of channel geometry on gravitational circulation in partially
mixed  estuaries.  In Proceeding of Buoyancy Effects on Coastal and Estuarine Dynamics, ed. D. Aubrey and C.
Fredricks, American Geophysical Union, 1996, pp.283-300.

Hamrick, J. M. 1996. A User's Manual for the Environmental Fluid Dynamics Computer Code (EFDC). Special
Report 331. The College of William and Mary, Virginia Institute of Marine Science, Gloucester Point, VA.

Fredricks, C.,  and J.  M. Hamrick.  1996. The effect of channel geometry on gravitational circulation in partially
mixed estuaries. Buoyancy Effects on Coastal and Estuarine  Dynamics, ed.  D. Aubrey and C. Fredricks, American
Geophysical Union, 283-300.

Kuo, A. Y., J. Shen, and J. M. Hamrick.  1996. The effect of acceleration on bottom shear stress in tidal estuaries.
Journal of Waterways, Ports, Coastal and Ocean Engineering.  122:75-83

Wu, T. S., J. M. Hamrick, S. C. McCutechon, and R. B. Ambrose.  1997. Benchmarking the EFDC/HEM3D surface
water hydrodymamic and eutrophication models.  Next Generation Environmental Models and Computational
Methods, ed. G. Delich and M. F. Wheeler, Society of Industrial and Applied Mathematics, Philadelphia, 157-161.

Hamrick, J. M., and T. S. Wu. 1997. Computational design  and optimization of the EFDC/HEM3D surface water
hydrodynamic and eutrophication models. Next Generation Environmental Models and Computational Methods, ed.
G. Delich and M. F. Wheeler, Society of Industrial and Applied Mathematics, Philadelphia, 143-156

Sucsy,  P. V., F. W. Morris, M. J. Bergman, and L. D. Donnangelo. 1998. A 3-d model of Florida's Sebastian River
estuary. In Proceedings of the 5th International Conference Estuarine and Coastal Modeling, ed.  M. L. Spaulding
and A.  F. Blumberg, American Society of Civil Engineers, New York, 1998, pp. 59-74.

Shen, J., M. Sisson, A, Kuo,  J. Boon, and S. Kim. 1998. Three-dimensional numerical modeling of the tidal York
River system, Virginia. Estuarine  and Coastal Modeling.  In Proceedings of the 5th  International  Conference
Estuarine and Coastal Modeling, ed. M. L. Spaulding and A. F. Blumberg, American Society of Civil Engineers,
New York, 1998, pp. 495-510.

Kim, S. C., L.D. Wright, J. P-Y. Maa, and J. Shen. 1998. Morphodynamic responses to extratropical meteorological
forcing on the  inner shelf of the Middle Atlantic Bight: Wind waves, currents, and suspended sediment transport. In
Proceedings of the 5th International Conference Estuarine and Coastal Modeling, ed. M. L. Spaulding and A. F.
Blumberg, American Society of Civil Engineers, New York, 1998, pp. 456-466.

Shen, J. and A.Y. Kuo.  1999. Numerical investigation of an estuarine front  and its associated topographic eddy.
Journal of Waterway, Port, Coastal, and Ocean Engineering. 125:127-135.
                                                  198

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                                                                           Appendix A: Model Fact Sheets
Shen, I, J. D. Boon, and A. Y. Kuo. 1999. A modeling study of a tidal intrusion front and its impact on larval
dispersion in the James River estuary, Virginia. Estuaries. 22:681-692.

Yang, Z., T.  Khangaonkar, C. DeGasperi, and K.  Marshall. 2000. Three-dimensional  modeling of temperature
stratification and density driven circulation in Lake Billy Chinook, Oregon. In Proceedings of the 6th International
Conference Estuarine and Coastal Modeling,  ed. M. L. Spaulding and H. L. Butler, American Society of Civil
Engineers, New York, 2000, pp. 411-425.

Jin, K. R., J. M. Hamrick, and T. S. Tisdale. 2000. Application of a three-dimensional hydrodynamic model for Lake
Okeechobee. Journal of Hydraulic Engineering. 106:758-772.

Moustafa, M. Z., and J. M. Hamrick. 2000. Calibration of  the wetland hydrodynamic  model to the Everglades
nutrient removal project. Water Quality and Ecosystem Modeling.  1:141-167.

Wang, H. V. and S. C. Kim. 2000. Simulation of tunnel island and bridge piling effects in a tidal estuary. In
Proceedings of the 6th International Conference Estuarine and Coastal Modeling, ed. M. L. Spaulding and H. L.
Butler, American Society of Civil Engineers, New York, 2000, pp. 250-269.

Kim, S. C., J. Shen, C. S. Kim, and A. Y. Kuo. 2000. Application of VIMS HEM3D to a macro-tidal environment.
In Proceedings of the 6th International Conference Estuarine  and Coastal Modeling, ed. M. L. Spaulding and H. L.
Butler, American Society of Civil Engineers, New York, 2000, pp. 238-249.

Hickey, K., I. Morin, M. Greenblatt, and G. Gong. 2000. 3D hydrodynamic model of an estuary in Nova Scotia. In
Proceedings of the  6th International Conference Estuarine  and Coastal Modeling, M. L.  Spaulding and H. L.
Butler, Eds., American Society of Civil Engineers, New York, 2000, pp.  1100-1111.

Boon, J. D., A. Y. Kuo, H. V. Wang, and J. M. Brubaker. 2000. Proposed third crossing of Hampton Roads, James
River, Virginia: Feature-based criteria for evaluation of model study results. In Proceedings of the 6th International
Conference Estuarine and Coastal Modeling,  ed. M. L. Spaulding and H. L. Butler, American Society of Civil
Engineers, New York, 2000, pp. 223-237.

Ji, Z.-G., M. R.  Morton, and J. M. Hamrick. 2001. Wetting and drying simulation of estuarine processes. Estuarine,
Coastal and Shelf Science. 53:683-700.

Hamrick, J. M., and Wm. B. Mills. 2001. Analysis of temperatures in Conowingo Pond as influenced by the Peach
Bottom atomic power plant thermal discharge. Environmental  Science and Policy. 3:sl97-s209.

Jin, K. R., Z.  G. Ji, and J. M. Hamrick. 2002. Modeling winter circulation  in Lake Okeechobee, Florida. Journal of
Waterway, Port, Coastal, and Ocean Engineering. 128:114-125.

Ji, Z.-G.,  J. H.  Hamrick, and J. Pagenkopf. 2002.  Sediment and  metals modeling in  shallow river. Journal of
Environmental Engineering. 128:105-119.

Yang, Z. and J. M. Hamrick. 2002. Variational inverse parameter estimation  in a long-term tidal transport model.
Water Resources Research. 38:10.

Yang, Z. and J. M. Hamrick. 2003. Variational inverse parameter estimation in a cohesive  sediment transport model:
an adjoint approach Journal of Geophysical Research. 108(C2): 3055.

Wool, T. A., S.  R. Davie, and H. N. Rodriguez. 2003. Development of three-dimensional hydrodynamic and water
quality models to support TMDL decision process for the Neuse River estuary, North Carolina. J. Water Resources
Planning and Management. 129:295-306.

Yang, Z. and J. M. Hamrick. In press.  Optimal control of salinity boundary condition in a tidal model using a
variational inverse method.  Estuarine, Coastal and Shelf Science.
                                                  199

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                                                                      Appendix A: Model Fact Sheets
                   EPIC: Erosion Productivity Impact Calculator


Contact Information
Jimmy Williams
Texas A&M University - TABS
Blackland Research and Extension Center
720 E. Blackland Road
Temple, TX 76502
(254)774-6124
Williams (@,brc.tamus.edu

Avery Meinardus
Texas A&M University - TABS
Blackland Research and Extension Center
720 E. Blackland Road
Temple, TX 76502
 (254)774-6110
epic(g),brc.tamus.edu
http://www.brc.tamus.edu/epic/
http://www.wiz.uni-kassel.de/model  db/mdb/epic.html


Download Information
Availability: Nonproprietary
Cost: N/A


Model Overview/Abstract
EPIC assesses the effects of soil erosion on productivity and predicts the effects of management decisions on soil,
water, nutrient, and pesticide movements and their combined impact on soil loss, water quality, and crop yields for
areas with homogeneous soils and management.


Model Features
    •   Simulates erosion effects on water quality
    •   Crop management tool that examines sediment, nutrient, and pesticide transport processes


Model Areas Supported
Watershed             Medium
Receiving Water        None
Ecological             None
Air                   None
Groundwater           None
                                              200

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                                                                            Appendix A: Model Fact Sheets
Model Capabilities

Conceptual Basis
EPIC is a field-scale model that was developed to assess the effects of soil erosion on agricultural productivity and
water quality. It is used to examine farming practices and implementation activities.

EPIC has also  been used widely for the study  of global climate change.  The USDA and Texas Agricultural
Experimental Station  (Texas  A&M)  jointly  developed this version of the  model called Environmental Policy
Integrated Climate (EPIC).


Scientific Detail
EPIC is a continuous simulation model that has been used to examine long-term effects of various components of
soil erosion on crop production (Williams et al.,  1983). EPIC is a public domain model that has been used to
examine the effects of soil erosion on crop production in over 60 different countries in Asia, South America, and
Europe. The model is used to examine soil erosion, economic factors, hydrologic patterns, weather effects, nutrients,
plant growth dynamics, and crop management. The major components in EPIC are weather simulation, hydrology,
erosion-sedimentation, nutrient cycling, pesticide fate,  plant growth, soil temperature, tillage, economics, and plant
environment control.

The model requires input from GIS layers. These include soil series and weather data, although the model can
generate the necessary weather parameters. The model also requires management information that can be input from
a text file. Currently, there are  many management files that exist for EPIC, and an effort is underway to catalog these
files and provide  them to users. The  model provides output on crop yields, economics of fertilizer  use, and  crop
values.

In the calculations for surface  runoff,  runoff volume is estimated by using a modification of the  Soil Conservation
Service (SCS) curve number technique. There are two options for estimating the peak runoff rate—the modified
Rational formula and the SCS  TR-55 method. The EPIC percolation component uses a  storage routing technique to
simulate flow through soil layers. When soil water content exceeds  field capacity, the water flows  through the soil
layer. The reduction in soil water is simulated by a derived routing equation.  Lateral subsurface flow is calculated
simultaneously with percolation. The evapotranspiration is calculated in four ways, using the following equations:

    •   Hargreaves and Samani
    •   Penman
    •   Priestley-Taylor
    •   Penman-Monteith

The water table height is simulated without direct linkage to other soil water processes  in the root zone to allow for
offsite water effects.  EPIC drives  the water table up and down between input values  of maximum and minimum
depths from the surface.

The EPIC precipitation model developed by Nicks is a first-order Markov chain model. Temperature and radiation
are simulated in EPIC by using a  model developed by Richardson. The EPIC wind erosion model, WECS (Wind
Erosion Continuous Simulation), is used to calculate wind characteristics, including erosion due to the  wind. The
relative humidity  model simulates  daily average relative humidity from the monthly average by using a triangular
distribution.

To simulate rainfall/runoff erosion, EPIC used six equations—the USLE, the Onstad-Foster modification of the
USLE, the MUSLE, two recently developed variations of MUSLE, and a MUSLE  structure that  accepts input
coefficients. The six equations are identical except for their energy components. Contaminants, such as nitrogen and
phosphorus, are used in the EPIC model. EPIC simulates the following processes involving contamination:

    •   Nitrate losses
    •   Contaminant transport due to  soil water evaporation
    •   Organic nitrogen transport due to sediment
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                                                                           Appendix A: Model Fact Sheets
    •   Damnification
    •   Mineralization
    •   Immobilization
    •   Nitrification
    •   Volatilization
    •   Soluble phosphorus loss in surface runoff
    •   Mineral phosphorus cycling

For climate change studies, the EPIC model appears to be the most complete model available for evapotranspiration
cover design. The most noteworthy example is the MINK (Missouri-Iowa-Nebraska-Kansas) study (Rosenberg and
Crosson, 1991). This study examined the effects of elevated CO2 (EPIC had to be modified to incorporate sensitivity
to CO2) and temperature on crop yields, soil erosion, and economics in this four state region. The MINK study also
provides general insights about the use of models for global change research.


Model Framework
    •   Field-scale, erosion based


Scale

Spatial Scale
    •   One-dimensional, agricultural field/farm scale


Temporal Scale
    •   Daily timestep, long-term simulations (1-4,000 years)


Assumptions
The model assumes that the dynamics of each physical, chemical, and biological component can be described by the
principle of conservation of mass.


Model Strengths
    •   Has been used extensively to examine the effects of soil erosion and agricultural processes.
    •   Describes the phosphorus cycle and differentiates between all forms of phosphorus.
    •   Can be used to simulate the fate of agricultural pesticides.


Model Limitations
    •   Cannot represent watershed subsurface flow.
    •   Does not simulate sediment routing in detail.
    •   No mention of how the model deals with tile drains.


Application History
See available literature.


Model Evaluation
EPIC has been  used extensively in the United State and abroad to predict soil erosion and effects, along with the
potential costs associated with various management activities. See References for more information.

A soil loss  model  comparison was conducted by Bhuyan et al. 2002, which  included evaluations  of EPIC,
ANSWERS, and WEPP. Although the results from all three models were within the range of observed values in the
                                                  202

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                                                                       Appendix A: Model Fact Sheets
case study, WEPP soil loss predictions were the most accurate. However, WEPP cannot be used to examine water
quality effects.


Model Inputs
    •    Daily timestep—long term simulations (1-4,000 years)
    •    Soil, weather, tillage, and crop parameter data supplied with model
    •    Soil profile can be divided into ten layers
    •    Homogeneous areas up to large fields
    •    Weather generation is optional


Users' Guide
Available online: http://www.wiz.uni-kassel.de/model  db/mdb/epic.html


Technical Hardware/Software Requirements

Computer hardware:
    •    PC


Operating system:
    •    PC-DOS, UNIX


Programming language:
    •    FORTRAN version 5125


Runtime estimates:
    •    Minutes (1 sec./simulation year)


Linkages Supported
Unknown


Related Systems
APEX - small watershed scale agricultural model


Sensitivity/Uncertainty/Calibration
See references. No specific tools available.


Model Interface Capabilities
    •    Spatial-EPIC is a recently developed GIS-based application for EPIC


References
Williams, J.R., P.T.  Dyke and C.A. Jones.  1983. EPIC: a model for assessing the effects of erosion on soil
productivity. In Analysis of Ecological Systems: State-of-the-Art in Ecological Modeling, ed. W.K. Laurenroth et al.
Elsevier, Amsterdam. pp553-572.

Jones, C.A., C.V. Cole, A.N. Sharpley, and J.R. Williams. 1984. A simplified soil and plantphosphorus model. Soil
Sci. Soc. Am. J. 48(4):800-805.
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                                                                          Appendix A: Model Fact Sheets
Williams, J.R., C.A. Jones, and P.T. Dyke. 1984.  A modeling approach to determining the relationship between
erosion and soil productivity. Trans. ASAE. 27:129-144.

J. Cavero, R.E. Plant, C. Sherman, J.R. Williams, J.R. Kiniry, and V.W. Benson. 1998. Application of EPIC Model
to Nitrogen Cycling in Irrigated Processing Tomatoes Under Different Management Systems. Agricultural Systems.
56(4):391-414.

S.W. Chung, P.W. Gassman, L.A. Kramer, J.R. Williams, and R. Gu. 1999. Validation of EPIC for Two Watersheds
in Southwest Iowa. J. Environ. Qual. 28:971-979.

J. Cavero, R. E. Plant, C. Sherman, D. B. Friedman, J. R. Williams,  J. R.  Kiniry, and V. W. Benson. Modeling
Nitrogen Cycling in Tomato-Safflower and Tomato-Wheat rotations. Agricultural System. 60:123-135.

Tharacad S. Ramanarayanan, M. V. Padmanabhan, G. N. Gajanan, Jimmy Willams. 1988. Comparison of Simulated
and Observed Runoff and Soil Loss on three Small United States Watersheds. NATO ASI Series. l(55):76-88.

J.G. Arnold, R. Srinivasan, R. S. Muttiah, J. R. Williams.  1998. Large Area Hydrologic Modeling and Assessment
Part I: Model Development. Journal of the American Water Resources Association. l(34):73-89.

J. R. Williams, J. G. Arnold.  1997. A System of Erosion-Sediment yield models. Soil Technology. 11:43-55.

Roloff, G., De Jong, R., Campbell, C.A. and Benson, V.W. 1998. EPIC estimates of soil water, nitrogen and carbon
under semi-arid temperate conditions. Can J. Soil Sci. 78:539-550.
                                                 204

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                                                                         Appendix A: Model Fact Sheets
                  GISPLM: CIS-Based Phosphorus Loading Model


Contact Information
William W. Walker, Jr.
1127 Lowell Road
Concord, Massachusetts 01742-5522
(978) 369-8061
wwwalker@wwwalker. net
http ://www. wwwalker.net


Download Information
Availability: Nonproprietary
http://wwwalker.net/gisplm/index.htm
Cost: N/A


Model Overview/Abstract
GISPLM uses a spreadsheet  interface to develop cost-effective strategies  to  reduce phosphorus  loads from
watersheds. The watershed is defined as a number of subwatersheds or segments linked in a branched network.
Flows and phosphorus loads are evaluated using watershed features extracted from GIS, climatologic data, and other
local data. Phosphorus sources include runoff, farm animal populations, and point discharges. All calculations are
controlled from a Quattro Pro (version 7.0) workbook. The workbook also provides access to all input and output
screens. The workbook  executes simulations by calling two FORTRAN programs, HYDRO and LOADS, which
predict surface runoff, stream flows, and phosphorus loads for each subwatershed. Flows and loads from each source
category (runoff, animal units, point sources) are totaled by model segment (subwatershed). Loads and flows totaled
by segment are routed  downstream to the mouth of the watershed. Empirical models are used to estimate the
retention of phosphorus  in lakes or impoundments  optionally located at the downstream ends of segments. The user
defines load control options for each source category.  Nonpoint source controls (BMPs) are defined for up to  12
land  use  categories. Point source controls for up  to 3 treatment levels are defined based on effluent phosphorus
concentration and flow-dependent costs.  The  user specifies a target load reduction as a percentage  of the load
predicted with no controls. GISPLM searches for the spatial  allocation of controls, which achieves the  target
reduction with minimum cost. Model results can be displayed spatially using Arc View 3.0 software.


Model Features
    •   Spreadsheet interface (Quattro Pro)
    •   Calculates surface runoff for each subwatershed
    •   Calculates phosphorus load through surface runoff for each subwatershed
    •   Flows and loads can be summarized from upstream subwatersheds to downstream outlet
    •   Simple empirical calculation for phosphorus retention in lakes and impoundments
    •   Capacity to define nonpoint source BMPs  for up to  12 land use categories
    •   Capacity to define 3 treatment levels for point sources
    •   Calculates minimum  treatment  cost  for  a targeted reduction of phosphorus for the  entire watershed
        (optimization)
                                                 205

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                                                                           Appendix A: Model Fact Sheets
Model Areas Supported
Watershed               Medium
Receiving Water         Low
Ecological               None
Air                     None
Groundwater            Very Low


Model Capabilities

Conceptual Basis
In GISPLM, a watershed is divided into many small subwatersheds to capture the spatial heterogeneity. Runoff and
phosphorus load are calculated  for each subwatershed.  Flow and loads can be summarized from the upstream
subwatersheds to the downstream outlet.  Best management practices  are  specified for  each source in each
subwatershed.


Scientific Detail
GISPLM is tool for developing cost-effective strategies to reduce phosphorus loads from watersheds. The watershed
is defined as a number of subwatersheds or segments linked in a branched network. Flows and phosphorus loads are
evaluated using watershed features extracted from GIS, climatologic data, and other local data. Phosphorus sources
include runoff, farm animal populations, and point discharges. All calculations are controlled from the Menu page of
the GISPLM. WB3 workbook. The Menu also provides access to all input and output screens.

HYDRO, a  compiled FORTRAN program, predicts  surface runoff from pervious areas for a  user-defined date
interval. Calculations of daily  runoff resulting from rainfall and snowmelt are driven by daily precipitation and air
temperature data. The algorithm  and parameter estimates are taken from Generalized Watershed Loading Functions
or GWLF model (Haith et al, 1992). HYDRO generates a table relating unit area surface runoff from pervious areas
to  SCS Runoff Curve Number. This table is later accessed by LOADS and the GISPLM workbook.

LOADS, another compiled FORTRAN program, calculates flows and phosphorus loads. The model reads watershed
data extracted from  GIS databases and creates an index based on  segment (subwatershed) number, model land use
code, and existing BMP code. LOADS calculates the total flow and load for each value  of the index, accounting for
differences in soil group, soil origin, slope, and stream proximity.  Runoff concentrations are specified as a function
of land use categories based on  literature review. LOADS produces an output file containing the total area, flow,
load, impervious area,  curve number, and  surface runoff for each index. This file is subsequently accessed by
GISPLM workbook for subsequent processing.

The remaining  calculations are  performed within the GISPLM  workbook. Flows and loads  from each  source
category (runoff, animal units and point sources) are totaled by model segment. Loads are adjusted to account for
existing phosphorus controls. Loads and flows are totaled by segment and routed downstream to the mouth of the
watershed. Empirical models (Vollenweider, 1976; Walker, 1987) are  used to estimate  the retention of phosphorus
in lakes or impoundments  optionally located at the downstream ends of segments.

The user defines load control options for each source category. Nonpoint-source controls (BMPs) are defined for up
to  12 land use categories. Estimates of load reduction efficiency, capital cost, and annual operating cost are specified
for each BMP. Point-source  controls for  up to 3 treatment levels  are  defined based on effluent  phosphorus
concentration and flow-dependent costs.

The user specifies a target load reduction as a percentage of the load predicted with no  controls. GISPLM searches
for the spatial allocation of controls, which achieves the target reduction with minimum cost. Total annualized costs
are minimized. Estimates of capital and operating costs are also generated. Allocations can be constrained to provide
equal  distribution of effort  across source categories.  Individual control measures can be specifically  included or
excluded.
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                                                                         Appendix A: Model Fact Sheets
Several graphical and tabular output formats are provided. These can be easily customized and manipulated within
the workbook to suit project needs. Model results can be displayed spatially using Arc View 3.0 software.

GISPLM is  configured for application to  the 137  km2 LaPlatte  River watershed in Vermont.  Guidance for
developing applications to other watersheds is provided.


Model Framework
    •   Watersheds are subdivided into subwatersheds with mixed land uses
    •   Land use, surface hydrology, and optional lakes or impoundments at the outlet of each subwatershed


Scale

Spatial Scale
    •   One-dimensional, subwatersheds


Temporal Scale
    •   Daily timestep


Assumptions
    •   Is a distributed model by land use but ignores the spatial location within a land use in a subwatershed
    •   Summarizes downstream flow and loads simply by adding the outputs from the upstream subwatersheds
    •   Describes BMP controls by their effectiveness and cost


Model Strengths
    •   Is a simple model
    •   Requires low level of expertise
    •   Can be  quickly applied to  evaluate phosphorus  reductions  due to lakes, impoundments,  and  BMP
        implementations
    •   Performs optimization on the total BMP cost for the entire watershed, given a load reduction target


Model Limitations
    •   Simulates only phosphorus
    •   Does not simulate sediment and sediment phosphorus
    •   Results in weak simulation of nutrient fluxes because a constant concentration is used
    •   Includes highly simplified flow routing
    •   Highly simplifies groundwater inflow
    •   Bases BMP simulations on a single reduction effectiveness value


Application History
GISPLM was applied to the 137-km2 LaPlatte River watershed in Vermont. Guidance for developing applications to
other watersheds is provided in the users' manual.


Model Evaluation
Unknown


Model Inputs
    •   Daily weather data (mean temperature and precipitation)
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                                                                       Appendix A: Model Fact Sheets
    •   Farm animal population data
    •   GIS data, including watershed boundaries, land use, soils (hydrologic group and slope class), streams, and
        BMP locations and types
    •   Runoff phosphorus concentrations by land uses
    •   Point source flow and concentrations
    •   BMP cost and efficiency


Users' Guide
Available online (as part of installation package): http://wwwalker.net/gisplm


Technical Hardware/Software Requirements

Computer hardware:
    •   PC


Operating system:
    •   WINDOWS (95 or NT)


Programming language:
    •   Quattro Pro Macros and FORTRAN


Runtime estimates:
    •   Minutes


Linkages Supported
None


Related Systems
GWLF


Sensitivity/Uncertainty/Calibration
The users' manual provides simple guidance on model calibration.


Model Interface Capabilities
    •   Controls all calculations from a menu page of a spreadsheet workbook (GISPLM.WB3, Quattro Pro). The
        workbook also provides access to all input and output screens.
    •   Can display model results spatially, using Arc View 3.0 software.


References
Haith, D.A., R. Mandel, R.S. Wu.  1992. GWLF - Generalized Watershed Loading Functions - Version 2.0. (User's
Manual). Department of Agricultural & Biological Engineering, Cornell University, Ithaca, New York.

Walker, W.W.  1987.  Phosphorus Removal by Urban Runoff Detention Basin. In Lake and Reservoir Management
Volume 3, North American Lake Management Society,  pp. 314-238.

Walker, W. W. 1987. Empirical Methods for Predicting Eutrophication in Impoundment Report 4. Applications
Manual Technical Report E-81-9. U.S. Army Corps of Engineers, Waterways Experiment Station, Vicksburg, MS.
                                               208

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                                                                          Appendix A: Model Fact Sheets
Walker, W. W. 1997. GISPLM User's Guide. LaPlatte River Phosphorus Modeling Project for Vermont Department
of Environmental Conservation, http://wwwalker.net/gisplm

Vollenweider, R.A. 1976. Advances in Defining Critical Loading Levels for Phosphorus in Lake Eutrophication.
Mem. 1st. Ital. Idrobiol. 33:53-83.

Vermont DEC & New York DEC.  1994. A Phosphorus Budget, Model, and Load Reduction Strategy for Lake
Champlain, Lake Champlain Diagnostic-Feasibility Study. Final Report.
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                                                                       Appendix A: Model Fact Sheets
     GLEAMS: Groundwater Loading Effects of Agricultural Management
                                            Systems


Contact Information
Frank M. Davis
Southeast Watershed Research Laboratory (SEWRL)
South Atlantic Area
P. O. Box 946
Tifton, GAS 1793
(229) 391-6846
fmd@tifton.cpes.peachnet.edu
http://sacs.cpes.peachnet.edu/sewrl/


Download Information
Availability: Nonproprietary
http://sacs.cpes.peachnet.edu/sewrl/Gleams/gleams y2k update.htm
Cost: N/A


Model Overview/Abstract
Groundwater Loading Effects of Agricultural Management Systems (GLEAMS) is  an extension of Chemicals,
Runoff,  and Erosion from  Agricultural  Management Systems (CREAMS)  model.  GLEAMS,  a continuous
simulation,  field-scale model assumes that a field has homogeneous land use, soils, and precipitation. The four
major components of the model are hydrology, erosion/sediment yield, pesticide transport, and nutrients. It also
estimates surface runoff and sediment losses from the field. GLEAMS can be used to  evaluate the impact of farm-
level management practices on potential pesticide and nutrient leaching within, through, and below the root zone.
GLEAMS can provide estimates  of the impact management  systems, such as planting dates, cropping systems,
irrigation scheduling, and tillage operations, have on the potential for chemical movement. GLEAMS can also be
useful in long-term  simulations for pesticide screening of soil/management. The  model tracks  movement of
pesticides with percolated water, runoff,  and sediment.  Upward movement of pesticides and plant uptake are
simulated with evaporation and transpiration. Degradation into metabolites is also simulated for compounds that
have potentially toxic bi-products. Erosion in overland flow areas is estimated using a modified Universal Soil Loss
Equation. Erosion in chemicals and deposition in temporary impoundments such as tile outlet terraces are used to
determine sediment yield at the edge of the field.


Model Features
    •   Edge of field simulation model


Model Areas Supported
Watershed               Low
Receiving Water         None
Ecological               Medium
Air                    None
Groundwater            Medium
                                               210

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                                                                          Appendix A: Model Fact Sheets
Model Capabilities

Conceptual Basis
GLEAMS is a physically based field-scale model.


Scientific Detail
The  hydrology component of GLEAMS  uses a mass balance approach and represents the principal hydrologic
processes of infiltration, runoff, water application by irrigation, evapotranspiration, and soil water movement within
and through the root zone. Runoff calculation is based on the modified Soil Conservation Service  (SCS) curve
number method. Percolation is calculated using storage-routing technique. Plant evapotranspiration  is calculated
using either Priestley-Taylor or Penman-Monteith method. Erosion is calculated as  detachment and transport
processes  using USLE elements. The nutrient component of GLEAMS simulates the  nitrogen and  phosphorous
cycles. The pesticide component of the model calculates the daily decay based on the pesticide half-life. Based on
the partition coefficient, a portion of the pesticide is lost into runoff solution and the other part into the soil phase.


Model Framework
    •   Edge-of-field and bottom-of-root zone simulations of water, nutrients and pesticides
    •   Mainly used to simulate management systems in agricultural land


Scale

Spatial Scale
    •   One-dimensional field-scale


Temporal Scale
    •   Daily


Assumptions
    •   Uses a lumped parameter approach
    •   Assumes a spatially homogenous agricultural field


Model Strengths
    •   Is a simple model with few input requirements


Model Limitations
    •   Is limited to an agricultural field of very small size
    •   Is not suited for bigger watersheds
    •   Is not suited for urban land uses


Application History
GLEAMS is developed as an improvement over CREAMS model. Both models have sufficient application history.
http://sacs.cpes.peachnet.edu/sewrl/Gleams/glmspub.htm.


Model Evaluation
Many peer-reviewed publications are available for GLEAMS. Few studies are conducted to evaluate the accuracy of
GLEAMS and to compare with similar models like EPIC and WEPP.
http://sacs.cpes.peachnet.edu/sewrl/Gleams/glmspub.htm.
                                                 211

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                                                                         Appendix A: Model Fact Sheets
Model Inputs
The inputs are provided separately for hydrology, erosion, pesticides, and nutrient components of the model. The
input requirements of the hydrology model include
    •   Daily precipitation
    •   Mean monthly minimum and maximum temperatures or mean daily temperature
    •   Mean monthly solar radiation
    •   Mean monthly wind movement and dew point temperature, if Penman-Monteith method is chosen for
        evapotranspiration calculation
    •   Soil composition

The input requirements of the erosion component include
    •   Overland flow profile (length and slope)
    •   Soil properties (credibility and horizon depths)
    •   Overland flow channel rating-curve properties

The pesticide component's input requirements include
    •   Crop rotation information
    •   Water solubility and partitioning coefficient of pesticide
    •   Half-life, initial concentration, and fraction available for washoff for foliage and soil
    •   Crop uptake coefficient

The nutrient component's input requirements include
    •   Crop rotation information
    •   Initial soil concentration and concentrations of nutrients in rainfall and irrigation water
    •   Fertilizer application rate
    •   Crop uptake coefficient
Users' Guide
Available online:
http://www.cpes.peachnet.edu/sewrl/Gleams/gleams y2k update.htm#GLEAMS%20V3.0%20Revisions
Technical Hardware/Software Requirements

Computer hardware:
    •   IBM-PC
Operating system:
    •   PC-DOS
Programming language:
    •   FORTRAN
Runtime estimates:
    •   Minutes
Linkages Supported
None
                                                212

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                                                                        Appendix A: Model Fact Sheets
Related Systems
CREAMS is the predecessor of GLEAMS.


Sensitivity/Uncertainty/Calibration
Not available


Model Interface Capabilities
    •   Arc View GIS interface (see Tucker et al. 1996 and
        http://www3.bae.ncsu.edu/Regional-Bulletins/Modeling-Bulletin/asae 2227-draft-extra.html')


References
Knisel, W.G., and P.M. Davis. 2000. GLEAMS: Grounchvater Loading Effects of Agricultural Management Systems.
Version 3.0. Publication No.  SEWRL-WGK/FMD-050199. U.S. Department of Agriculture, Agricultural Research
Service, Southeast Watershed Research Laboratory, Tifton, GA. 191 pp.

Leonard, R. A., W. G. Knisel, and D. A. Still.  1987. GLEAMS: Groundwater loading effects  of agricultural
management systems. Trans. ASAE. 30(5):1403-1418.

Tucker, M.  G., D. L. Thomas, and D. D. Bosch.  1996. GLEAMS and REMM GIS-based model system: results and
sensitivity ofhydrologic components. ASAE Technical Paper No. 96-2022. ASAE, St. Joseph, MI.

More publications: http://sacs.cpes.peachnet.edu/sewrl/Gleams/glmspub.htm
                                                213

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                                                                     Appendix A: Model Fact Sheets
  GLLVHT: Generalized, Longitudinal-Lateral-Vertical Hydrodynamics and
                                         Transport


Contact Information
J.E. Edinger Associates, Inc.
37 West Avenue
Wayne, PA 19087
(601)293-0965
jeeai(@jeeai.com
www.jeeai.com
http://www.jeeai.com/Softwares-GEMSS.htm


Download Information
Availability: Proprietary
Cost: Unknown


Model Overview/Abstract
GLLVHT is a three-dimensional numerical model that provides solutions for rivers, lakes, estuaries, and coastal
waters. GLLVHT has five modules—hydrodynamics, water quality, sediment transport, particle tracking, and oil-
spill simulation. The hydrodynamics module provides the transport information for all the other modules. The water
quality module is a modified version of EUTRO5. The  sediment transport module simulates the processes of
settling, flocculation, deposition, erosion/resuspension, bed load, armoring, bed structure, slump failure, and bed
deformation.


Model Features
    •   Hydrodynamic, temperature, and salinity
    •   Tracer simulation
    •   Suspended solids and sediment transport
    •   Nutrients, dissolved oxygen, and phytoplankton
    •   Coliform/bacteria
    •   Toxic organics and metals


Model Areas Supported
Watershed             None
Receiving Water         High
Ecological             Medium
Air                   None
Groundwater           None


Model Capabilities

Conceptual Basis
The waterbody is conceptualized as a series of grid points on a quasi-curvilinear coordinate system.
                                              214

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                                                                          Appendix A: Model Fact Sheets
Scientific Detail
The  governing equations of the hydrodynamic module are developed from the horizontal momentum balance,
continuity, constituent transport, and the equation of state. The hydrostatic assumption is  applied to simply the
vertical momentum balance. A zero equation turbulence scheme is utilized to close the governing equations. The
velocities and water surface elevations are obtained by  solving the governing equations with a semi-implicit
numerical scheme. Transport equations are solved with an explicit scheme. A high-order difference of space is
applied for solving the transport. The transport of water quality variables and sediments are  solved using the same
numerical scheme for temperature and salinity. Other processes, such as the kinetic reactions of water quality and
sediment settling and erosion, are considered as the source and sink terms in the governing equations.


Model Framework
    •   Three-dimensional
    •   River, lake, reservoir,  estuary, and ocean


Scale

Spatial Scale
    •   One-, two-, and three-dimensional


Temporal Scale
    •   Variable timestep


Assumptions
    •   Hydrostatic assumption, Boussinesq approximation


Model Strengths
    •   Coupled hydrodynamic and transport model
    •   High-order accuracy transport scheme similar to ULTIMATE scheme


Model Limitations
    •   Zero equation turbulence closure scheme (Prandtl mixing length)
    •   Vertical Z grid (not able to follow the bathymetry)
    •   No sediment diagenesis
    •   Single phytoplankton group


Application History
Examples of application include modeling various processes such as intake entrainment; jet discharge; biochemical
oxygen demand; plume; and cooling water discharge into rivers, lakes, reservoirs, estuaries, and coastal waters, such
as Humboldt River, Nevada;  Grand  Lake, New Brunswick; Nechako Reservoir, British Columbia; Delaware
Estuary, Delaware; and San Diego Bay, California.


Model Evaluation
The theory and model development are published in several peer review journal papers.


Model Inputs
    •   Initial conditions
    •   Bathymetry and waterbody boundaries
                                                 215

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                                                                    Appendix A: Model Fact Sheets
    •  Physical coefficients
    •  Water surface elevations or flow rate at open boundary (boundary conditions)
    •  Time sequences of hydrometeorological conditions
    •  Load of water quality variables
Users' Guide
GLLVHT Model, Technical Information and User's Guide


Technical Hardware/Software Requirements

Computer hardware:
    •  PC


Operating system:
Microsoft Windows 95/98/2000, XP, or Microsoft Windows NT 4.0


Programming language:
    •  FORTRAN 90


Runtime estimates:
    •  Minutes to hours


Linkages Supported
EUTRO, CE-QUAL-ICM, JEEAI's GITF


Related Systems
EFDC, ECOMSED, WASP/EUTRO, CE-QUAL-ICM


Sensitivity/Uncertainty/Calibration
Not available. No specific supporting tools included.


Model Interface Capabilities
    •  GEMSS provides pre-processing and post-processing functions


References
J.E.Edinger Associate, Inc. GLLVHT Model, Technical Information and User's Guide. J.E.Edinger Associate, Inc.,
Wayne, PA.
                                             216

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                                                                         Appendix A: Model Fact Sheets
             GSSHA: Gridded Surface Subsurface Hydrologic Analysis


Contact Information
WMS (including GSSHA):
Barbara Parsons
U.S. Army Corps of Engineers
Engineer Research and Development Center
Waterways Experiment Station
Coastal and Hydraulics Laboratory
Hydrologic Systems Branch
3 909 Halls Ferry Road
Vicksburg,MS39180
(601)634-2344
Barbara.A.Parsons(@,erdc.usace.army.mil
http://chl.wes.army.mil/software

GSSHA/CASC2D:
Fred L. Ogden
University of Connecticut
Dept. of Civil & Environmental Engineering, U-37
Storrs, CT 06269
(860)486-2771
ogden(g),engr.uconn.edu
http://www.engr.uconn.edu/~ogden/


Download Information
Availability:
GSSHA is included in WMS 2D Hydrology Package and can be purchased from EMS-I. Demonstration version is
free for download from the EMS-I website: http://www.ems-i.com/home.html
Cost:    $2400 for WMS 7 2D Hydrology Package (includes Map/Data/Drain/Grid/GSSHA)
        $1000 for GSSHA Model + 2D Grid Package (requires Map, Data, Drainage)


Model Overview/Abstract
GSSHA is a reformulation and enhancement of CASC2D developed by the Hydrologic Systems Branch of the U.S.
Army Corps of Engineers' Coastal and Hydraulics Laboratory (Downer et al., 2002). GSSHA retains the
functionality of CASC2D, but adds non-Hortonian runoff as well as many other features. Other improvements in
GSSHA that go beyond CASC2D include Richard's equation infiltration, lakes, wetlands, detention basins,
improved computational routines, full-dynamic wave channel routing with tidal influence, hydraulic structures with
rule curves, rating curves, scheduled releases, and improved erosion and sediment transport routines.  CASC2D
development was initiated in 1989 at the Center for Excellence in Geosciences at Colorado State University funded
by the U.S. Army Research Office (ARO). GSSHA is also one of the surface-water hydrologic models supported by
the Watershed Modeling System (WMS).

GSSHA is a  fully unsteady, physically  based, distributed-parameter, square-grid, two-dimensional,  hydrologic
model for simulating the response of a watershed subject to rainfall (Ogden, 2001) on an event or a continuous basis.
Major  processes  simulated  include  continuous  soil-moisture  accounting,  precipitation  distribution,  snow
accumulation  and melting; rainfall interception, infiltration, evapotranspiration, surface water retention, overland
flow routing, channel flow routing, unsaturated zone two-dimensional lateral flow, saturated zone groundwater flow;
overland sediment erosion, transport, and deposition; and sediment  channel routing. GSSHA allows the  user to
                                                217

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                                                                            Appendix A: Model Fact Sheets
select a  grid  size (typically 30-200 m)  that appropriately describes  the  spatial  variability in all  watershed
characteristics. The physically based distributed model is superior in simulation of runoff process at small scales
within the watershed. As a spatially distributed model, GSSHA offers the capability of determining the value of any
hydrologic variable at any grid point in the watershed at the expense of requiring significantly more  input than
traditional approaches. GSSHA can accept spatially varied hydrologic parameter input or rainfall input; however,
because of the extensive amount of data, data uncertainty may result in a non-unique calibration.


Model Features
    •   Grid-based hydrologic model
    •   Precipitation distribution and snow accumulation and melting
    •   Rainfall  interception,  infiltration, evapotranspiration,  surface water  retention, overland flow routing,
        channel flow routing, unsaturated zone two-dimensional lateral flow, saturated zone groundwater flow
    •   Overland sediment erosion, transport, and deposition
    •   Sediment channel routing
    •   Lakes, wetlands, and detention basins simulation
    •   Hydraulic structures with rule curves, rating curves, and scheduled releases


Model Areas Supported
Watershed              High
Receiving Water         Medium
Ecological              None
Air                     None
Groundwater            Medium


Model Capabilities

Conceptual Basis
The watershed is divided into  a uniform finite difference grid. Processes that occur before, during, and after a
rainfall event are calculated for each grid, routed through the flow direction, and integrated to produce the watershed
output.


Scientific Detail
GSSHA is physically based and solves the equations of conservation of mass and energy to determine  the timing
and path of runoff in the watershed. GSSHA applies Green and Ampt, with or without a redistribution method, and
optional Richard's equation for infiltration simulation; an explicit finite-difference, two-dimensional, diffusive-wave
method for overland flow routing;  and options of explicit one-dimensional,  diffusive-wave, or implicit dynamic-
wave channel routing. Snowmelt is  simulated based on energy balance. GSSHA applies bucket model or Richard's
equation  for computing  soil moisture in the vadose zone; Deardoff or Penman-Monteith with seasonal  canopy
resistance method for evapotranspiration; and Darcy's Law for stream/groundwater interaction and exfiltration. The
empirical  Kilinc  and Richardson soil erosion model,  as modified by Mien (1995),  is applied  in GSSHA to
determine the  sediment  transport from one overland flow grid cell  to the next.  GSSHA  employs Yang (1973)
method to routing sand-size sediment in stream channels. Silt and clay size sediment is assumed to be transported
with flow; therefore, deposition or erosion of silt and clay within the channels  is  neglected (Ogden,  1998). A
physically based nutrient module has been incorporated into the GSSHA and can simulate N and P transformation
based on the SWAT nitrogen and phosphorus cycle kinetics.


Model Framework
    •   Grid-based
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                                                                          Appendix A: Model Fact Sheets
Scale

Spatial Scale
    •   Two-dimensional grid overland
    •   One-dimensional channel network


Temporal Scale
    •   Variable timestep (seconds to minutes)


Assumptions
    •   Sediment discharge by means of overland flow is related to flow rate, soil credibility, and surface condition
    •   Deposition or erosion of silt and clay within the channels is negligible


Model Strengths
    •   Fully unsteady physically based distributed watershed model at a user-specified resolution
    •   Offers fully dynamic hydraulic channel routing
    •   Uses diffusive wave method to route overland flow
    •   Performs continuous simulation using variable timestep


Model Limitations
    •   Splash overland erosion is not considered
    •   Requires extensive input data preparation and calibration


Application History
It has been mainly used by the U.S. Army Corps of Engineers (USAGE). CASC2D was recently applied to study the
extreme flood on the Rapidan River, Virginia, on June 27, 1995 (Smith et al., 1996), for the purpose of examining
geomorphological changes. CASC2D was also used by the  USAGE to evaluate the extreme urban flood event  in
Trenton, New Jersey (Stock, C.A., B.S.  Thesis, Princeton University, May 1997) for the purpose of recommending
stormwater management improvements.  CASC2D is currently being applied to evaluate the impact of radar-rainfall
estimation errors in a study funded by ARO and in an NSF-sponsored study of the devastating flood that severely
impacted Fort Collins, Colorado, on June 28, 1997.


Model Evaluation
Studies  have been conducted on GSSHA's predecessor, CASC2D. Recent experiences with CASC2D have shown
that in regions of infiltration-excess (Hortonian) runoff production, CASC2D is quite accurate at predicting runoff,
even at internal locations within the watershed (Johnson et al., 1993, Ogden et al., 1998). The continuous simulation
capability of CASC2D has been found to be particularly good for reducing the uncertainty in estimating initial soil-
moisture conditions and for improving calibration uniqueness (Ogden and  Senarath 1997, Ogden et al., 1998).
CASC2D  has also proven to be valuable  for studying extreme runoff events. The overland  erosion/sediment
transport capabilities of CASC2D were evaluated in detail  by Johnson (1997). In upland areas, the method was
shown to calculate sediment yield well within the acceptable range of -50% to +200%. Compared with actual field
observations of annual sediment yield, CASC2D predictions were generally within 20% of observed values.


Model Inputs
    •   Rainfall (intensity, duration, and start time)
    •   Grid setup (grid size, number of rows and columns, and outlet grid row and column)
    •   For each grid (infiltration parameters,  retention-interception parameters,  soil properties, and  canopy
        parameters)
    •   For each channel (cross-section information, slope, Manning's n, and initial and boundary conditions)
                                                 219

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                                                                      Appendix A: Model Fact Sheets
Users' Guide

Available online (as part of the WMS document package): http://www.ems-i.com/home.html


Technical Hardware/Software Requirements

Computer hardware:
    •   PC


Operating system:
    •   PC-DOS and Windows


Programming language:
    •   C


Runtime estimates:
    •   Minutes to hours


Linkages Supported
    •   WMS 2D Hydrology Package


Related Systems
WMS, CASC2D


Sensitivity/Uncertainty/Calibration
GHHSA provides an automated calibration procedure using the shuffled complex evolution (SCE) method.


Model Interface Capabilities
    •   The WMS system provides full input data preparation and output display capabilities.
    •   The GRASS GIS, developed by the U.S. Army Construction Engineering Research Laboratories, can be
        used in the preparation of CASC2D datasets.


References
Downer, C. W., and F. L.  Ogden. 2002.  GSSHA-User's Manual, Gridded Surface Subsurface Hydrologic Analysis
Version 1.43 for WMS 6.1.  ERDC  Technical Report, Engineer Research and Development Center, Vicksburg,
Mississippi.

Downer, C.W., and F.L. Ogden. 2004. GSSHA: A model for simulating diverse streamflow generating processes. J.
Hydrol. Engrg. 9(3): 161-174.

Downer,  C.W., and  F.L. Ogden. 2004. Appropriate Vertical Discretization of Richards' Equation for Two-
Dimensional Watershed-Scale Modelling. Hydrological Processes. 18:1-22.

Downer, C.W., and F.L. Ogden. 2004. Prediction of runoff and soil moistures at the watershed scale: Effects of
model complexity and parameter assignment. Water Resour. Res. 39(3).
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                                                                           Appendix A: Model Fact Sheets
Julien, P.Y., B. Saghafian, and F.L. Ogden. 1995. Raster-based Hydrological Modeling of Spatially-varied Surface
Runoff. Water Resources Bulletin. 31(3):523-536.

Johnson,  B.E.  1997. Development of a Storm Event Based Two-Dimensional Upland Erosion Model. Ph.D. diss.,
Colorado State University, Fort Collins, CO.

Johnson,  B.E., N.K. Raphelt, and J.C.  Willis.  1993. Verification of Hydrologic Modeling Systems USGS Water
Resources Investigations Report 93-4018. In Proceedings of the Federal Water Agency Workshop on Hydrologic
Modeling-Demands for the 90's, June 6-9,  1993, Sec. 8.9-20.

Ogden, F.L. 1998. CASC2D  Reference  Manual version 1.18.  (Computer  program manual). University of
Connecticut, Storrs, CT. Available at http://www.engr.uconn.edu/~ogden/casc2d/.

Ogden, F.L., S.U.S. Senarath,  and B.  Saghafian.  1998.  Use of Continuous Simulations to Improve Distributed
Hydrologic Model Calibration Uniqueness.  Unpublished paper.

Ogden, F.L., and S.U.S. Senarath. 1997. Continuous Distributed Parameter Hydrologic Modeling with CASC2D. In
Proceedings of the XXVII Congress, International Association of Hydraulic Research, San Francisco, CA, Aug. 10-
15, 1997.

Smith, J.A., M.L. Baeck, and M.  Steiner. 1996. Catastrophic rainfall from and upslope thunderstorm in the central
Appalachians: The Rapidan storm of June 27, 1995. Water Resources Research. 32(10):3099-3113.

Stock, C.A. 1997. B.S. Thesis, Princeton University, Princeton, New Jersey.

Yang, C.T. 1973. Incipient motion and sediment transport. Journal Hydraulics. 99(HY10): 1679-1704.
                                                 221

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                                                                         Appendix A: Model Fact Sheets
                 GWLF: Generalized Watershed Loading Functions


Contact Information
Douglas A. Haith
Department of Agricultural and Biological Engineering
Cornell University
Ithaca, NY 14853
(607) 255-2802


Download Information
Availability: Nonproprietary
The  original version of the model has been used  for 15 years and can be obtained from Dr. Haith at Cornell
University.
A Windows interface is available at http://www.vims.edu/bio/vimsida/basinsim.html (Dai et al, 2000).
Perm State University developed an Arc View interface for GWLF (http://www.avgwlf.psu.edu/) and compiled data
for the entire State of Pennsylvania (Evans et al., 2002).
Cost: N/A


Model Overview/Abstract
GWLF is used for the simulation of mixed land use watersheds to evaluate the effect of land use practices on
downstream loads of sediment and nutrients (N, P). Typically used to evaluate long-term loadings,  GWLF was
developed at Cornell University as "a compromise between the empiricism of export coefficients and the complexity
of chemical simulation models" (Haith and Shoemaker, 1987). As a loading function model, it simulates runoff and
sediment delivery using the curve number (CN) and Universal Soil Loss Equation (USLE), combined with average
nutrient concentration, based on land use. Because of the lack of detail in predictions and stream routing, the outputs
are only given monthly, although they are calculated on a daily basis.

More recently, an in-stream routing and sediment  transport component has been added and linked to BasinSim
GWLF model with a generic Arc View interface that is able to utilize the national land use and soil GIS data. The
new  component employs the algorithms in the Annualized Agricultural Nonpoint Source Model (AnnAGNPS) to
simulate sediment transport. The Arc View interface automatically prepares the input files for GWLF and generates
stream network that links multiple subwatersheds  in a study area.  Sediment transport is simulated  using three
particle  size classes (clay, silt, and sand). The Muskingum-Cunge method is used for flow routing.  The GWLF
output is interpolated for small timesteps (daily or subdaily) to meet the requirement of the in-stream modeling
component. The new enhanced GWLF modeling system (the generic Arc View interface, BasinSim GWLF, and the
in-stream routing/transport module) is  currently being applied to West Virginia TMDL projects (Tetra Tech, Inc.,
Fairfax, Virginia).


Model Features
    •   Calculation of water, sediment,  and total and dissolved nitrogen and phosphorus from a watershed with
        mixed land uses
    •   Low  input data requirements


Model Areas Supported
Watershed              Medium
Receiving Water        None (original version), Low (Tetra Tech version)
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                                                                           Appendix A: Model Fact Sheets
Ecological               None
Air                     None
Groundwater            Low


Model Capabilities

Conceptual Basis
GWLF was developed as "a compromise between the empiricism of export coefficients and the complexity of
chemical simulation models" (Haith and Shoemaker,  1987). As a loading function model, it simulates runoff and
sediment delivery using very  simple, yet  widely  acceptable,  algorithms,  combined with average  nutrient
concentration, based on land use.


Scientific Detail
Runoff is calculated by  means of the  SCS curve number equation. USLE is applied to simulate erosion. Rural
nutrients are estimated based  on empirical concentrations of each land use, which are  based on both dissolved
concentration in runoff and solid concentration in sediment. Urban nutrient loads are computed by exponential
accumulation and washoff functions. Nutrient loads from septic systems are calculated by estimating the per capita
daily load from each type of septic system considered and the number of people in the watershed served by each
type. Groundwater runoff and discharge are obtained from a lumped-parameter watershed water balance  for both
shallow saturated and unsaturated zones.


Model Framework
    •   Watershed with mixed land uses
    •   Land use, surface hydrology, unsaturated soil  zone, shallow saturated zone, and deep saturated zone


Scale

Spatial Scale
    •   One-dimensional, subwatershed overland


Temporal  Scale
    •   Daily input
    •   Monthly output


Assumptions
    •   It is a distributed model by land use but ignores the spatial location within a land use in a subwatershed
    •   A unit (watershed or subwatershed) is divided into surface, unsaturated zone, and saturated zone
    •   Pollutant parameters values are based on data  of a particular study area


Model Strengths
    •   It is a simple model
    •   It requires low level of expertise
    •   It can be quickly applied to evaluate potential  loadings with some recognition of seasonal variability


Model Limitations
    •   Simplifications in stream transport and water quality simulation
    •   Simulation of peak nutrient fluxes is weak because a constant concentration is used
    •   Highly simplified flow routing
    •   Groundwater inflow represented using a user-defined recession coefficient
                                                  223

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                                                                          Appendix A: Model Fact Sheets
    •   Stormwater storage and treatment are not considered


Application History
GWLF has been used in studies and TMDL development nationally. It is suitable for application to generalized
watershed loading, source  assessment, and seasonal and interannual variability.  It has been extensively used in
northeast and mid-Atlantic regions. It has been adopted by Pennsylvania as state system for TMDL development and
agricultural land management.


Model Evaluation
GWLF validations have been published in a number of peer-reviewed studies,  including Haith and Shoemaker
(1987), Howarth et al. (1991), Swaney et al. (1996), Lee et al. (2000), and Schneiderman et al. (2002), who made
several modifications to the model. The algorithms on which the model is based are widely used and accepted. The
model is in the public domain and the source code is available through Cornell University.


Model Inputs
    •   Climate: daily precipitation and temperature data and runoff source areas
    •   Transport parameters: runoff curve numbers,  soil  loss factor,  evapotranspiration cover coefficient,
        groundwater recession and seepage coefficients, and sediment delivery ratio
    •   Chemical parameters: urban nutrient accumulation rates, dissolved nutrient concentrations in runoff, and
        solid-phase nutrient concentrations in sediment
    •   Septic System: per capita nutrient load, system effluent, nutrient losses  due to plant uptake, and people
        served by septic system
    •   Point source discharge and concentration


Users' Guide
Complete documentation is readily available (contact Dr. Haith for a hardcopy). The manual (Haith et al., 1992) is
available as part of the BasinSim manual (Dai et al., 2000) at http://www.vims.edu/bio/vimsida/basinsim.html.


Technical Hardware/Software Requirements

Computer hardware:
    •   PC


Operating system:
    •   PC-DOS, Windows


Programming language:
    •   BASIC,  Visual BASIC


Runtime estimates:
    •   Seconds to minutes


Linkages Supported
Tetra Tech has developed an ArcGIS interface and a stream network transport model for BasinSim (GWLF) for
Windows
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                                                                           Appendix A: Model Fact Sheets
Related Systems
BasinSim for Windows (http://www.vims.edu/bio/models/basinsim.htmlX AVGWLF (http://www.avgwlf.psu.edu/)


Sensitivity/Uncertainty/Calibration
The BasinSim interface provides  a plotting tool for users to compare the simulated monthly  watershed flow,
sediment, and nutrients loadings with observed data.


Model Interface Capabilities
    •   DOS version: Option menu and graphic and text output
    •   Windows version: Standard Windows features
    •   ArcGIS interface: Perm State AVGWLF; Tetra Tech Arc View for BasinSim


References
Delwiche, L.L.D., and D.A. Haith.  1983. Loading functions for predicting nutrient losses from complex watersheds.
Water Resources Bulletin. 19(6):951-959.

Haith, D.A. 1985. An event-based procedure for estimating monthly sediment yields. Transactions of the American
Society of Agricultural Engineers. 28(6): 1916-1920.

Haith, D.A.  and L.L.  Shoemaker, 1987. Generalized Watershed Loading Functions  for Stream Flow Nutrients.
Water Resources Bulletin. 23(3):471-478.

Haith, D.A. 1990. Mathematical models of nonpoint-source pollution. Cornell Quarterly. 25(1):26.

Haith, D.R., R. Mandel, and R.S.  Wu. 1992.  GWLF: Generalized Watershed Loading Functions  User's Manual,
Vers.  2.0. (Computer program manual). Cornell University, Ithaca, NY.

Dai, T., R.L. Wetzel,  Tyler R.L. Christensen and E.A. Lewis. 2000. BasinSim  1.0 A  Windows-Based Watershed
Modeling Package User's Guide  SRAMSOE #362. (Computer program  manual). Virginia Institute of Marine
Science,  School  of  Marine Science,  College of William  &  Mary,  Gloucester  Point,  VA.  Available  at
http://www.vims.edu/bio/vimsida/basinsim.html

Evans, B.M., D.W. Lehning, K.J. Corradini, G.W. Petersen, E. Nizeyimana, J.M. Hamlett, P.O.  Robillard, and R.L.
Day.  2002. A Comprehensive GIS-Based Modeling Approach for Predicting Nutrient Loads in Watersheds. J.
Spatial Hydrology. 2(2). Available at http://www.spatialhvdrology.com/

Howarth, R.W., J.R. Fruci, D. Sherman. 1991. Inputs of sediment and carbon to an estuarine ecosystem: Influence of
land use. Ecological Applications. l(l):27-39.

Lee, K.-Y., T.R. Fisher, T.E. Jordan, D. L. Correll, and D. E. Weller. 2000. Modeling the  hydrochemistry of the
Choptank River basin using GWLF and GIS. Biogeochem. 49: 143-173.

Parson, S.C.  1999. Development of an Internet watershed educational  tool (INTERWET)  for the Spring Creek
Watershed of central Pennsylvania. Ph.D. diss., The Pennsylvania State University, University Park, Pennsylvania.
Available at http://www.interwet.psu.edu/index.htm

Schneiderman, E.M., D.C. Pierson, D.G. Lounsbury, and M.S. Zion. 2002.  Modeling the hydrochemistry of the
Cannonsville Watershed with Generalized Watershed Loading Functions (GWLF).  J. Amer. Water Resour. Assoc.
38:1323-1347.

Swaney,  D.P., D. Sherman, and R.  W. Howarth. 1996. Modeling water, sediment, and organic carbon discharges in
the Hudson-Mohawk Basin: coupling to terrestrial sources. Estuaries. 19: 833-847.
                                                  225

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                                                                         Appendix A: Model Fact Sheets
               HEC-6:  Scour and Deposition in Rivers and Reservoirs


Contact Information
U.S. Army Corps of Engineers
Institute for Water Resources
Hydrologic Engineering Center
609 Second Street
Davis, CA 95616-4687
(530)756-1104
hec.webmastertgiusace.army.mil
http://www.hec.usace.armv.mil/software/legacvsoftware/hec6/hec6.htm


Download Information
Availability: Nonproprietary
Cost: N/A

HEC-6 was developed for the U.S. Army Corps of Engineers, but the model program files, executables,  and
documentation are available for  free download by  the public  at the website above. However, the Hydrologic
Engineering Center (HEC) of the U.S. Army Corps of Engineers will not provide user support to non-Corps users. In
addition, public distribution of the model source code is generally discouraged by HEC.

Proprietary versions of HEC-6 are also available through venders that provide model distribution and user support
for a fee.  A list of venders is included at the HEC website. Some proprietary versions of HEC-6 include enhanced
simulation capabilities that expand on limitations of HEC-6 and provide more user friendliness. For example, the
proprietary HEC-6T (MBH Software, Inc., 2002) provides additional plotting and hydraulic simulation capabilities
not available in the HEC-6 version downloadable from HEC.


Model Overview/Abstract
HEC-6 is a one-dimensional  open channel flow model capable of simulating changes of river profile due to scour
and/or sediment deposition. Based upon flow records, a water surface profile is calculated that provides an energy
slope, velocity, and depth at each cross-section. These predictions are used to estimate potential sediment transport
rates at each  section, which are  considered with volume of flow and sediment yield from upstream sources to
determine the scour and deposition. Changes  in bed elevation, which impacts channel geometry and subsequent
sediment  transport potential, are also computed for each section. HEC-6 can be used to simulate both channel and
reservoir sediment deposition and  can include analysis of impacts of dredging.


Model Features
    •  Water surface and energy profile simulation
    •  Sediment scour and deposition modeling
    •  Sediment transport modeling
    •  River geometry simulation


Model Areas Supported
Watershed              None
Receiving Water        High
Ecological              None
Air                    None
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                                                                            Appendix A: Model Fact Sheets
Groundwater            None


Model Capabilities

Conceptual basis
Capability to analyze networks of streams, reservoirs, automatic channel dredging, various levee and encroachment
options, and several options for computation of sediment transport rates.


Scientific detail
HEC-6 (HEC, 1991a) simulates sediment bed and suspended load transport as a function of Einstein's Bed-Load
Function (1950) that assumes an alluvial stream with consistent sediment material between the streambed and that
moving in the stream. Based on characteristics of the stream hydraulics and the sediment material (e.g., grain size
distribution), the rate of sediment transport is calculated.

A one-dimensional energy equation (USAGE, 1959) is used to compute water surface profiles for characterization of
stream hydraulics. Flow conveyance limits, levee  hydraulic assumptions, and hydraulic energy and resulting water
surface elevation are simulated in a manner similar to HEC-2 (HEC, 1991b). HEC-6 can be  operated in a "fixed
bed" mode that is similar to a HEC-2 application for simulation of water surface elevation only.

Sediment transport rates can be estimated by HEC-6 for grain sizes up to 2048 mm. Different methods for sediment
transport are used by HEC-6 based on grain size and user specification. Sediment transport potential is based only
on hydraulic and sediment material characteristics. Boundary conditions for sediment loading at the river main stem,
tributaries, or inflow/outflow points can be specified to change with time.


Model Framework
The model can represent a river or reservoir system consisting of  a main stem, tributaries,  and  local inflow/outflow
points in a one-dimensional mode. Inflowing sediment loads are  related to  water discharge by sediment-discharge
curves for the upstream boundaries.


Scale

Spatial Scale
    •   Operation unit one-dimensional


Temporal Scale
    •   Variable timesteps—Short timesteps must be taken during flood events when large amounts of sediment
        are  moving and the hydrograph is rapidly changing. Longer timesteps are used during low flow periods.
    •   This is discussed in further detail in the document Guidelines for the Calibration  and Application of
        Computer Program HEC-6 available at http://www.hec.usace.armv.mil/software/legacvsoftware/hec6/tdl3-
        documentation. htm


Assumptions
    •   Bed material transport algorithms assume that equilibrium conditions are reached within each timestep.
    •   The cross section is subdivided into two parts representative of a  movable and immovable bed based on
        limits of the wetted perimeter and other considerations.
    •   The entire wetted part of the cross  section is normally moved uniformly up or down; however, an option is
        available to adjust the bed elevation in horizontal layers when deposition occurs.
    •   Irregularities of the  streambed are  not simulated, but Manning's n values can be  specified as functions of
        discharge that can be assumed to indirectly account for effects of bed forms.
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                                                                         Appendix A: Model Fact Sheets
Model Strengths
    •   Simulates the sediment passing through each cross section and the volume of sediment deposited or
        scoured at each section.
    •   Can be used for simulating changing sediment and hydraulic conditions
    •   Can be used for simulation and design of channel or reservoir dredging


Model Limitations
    •   Does not include capabilities for simulating the development of meanders or lateral distribution of sediment
        load across a cross section.
    •   Does not simulate density and secondary currents.
    •   Designed to analyze long-term scour and/or deposition. Single flood event analyses must be performed
        with caution.
    •   Sediment transport in diverging streams is not possible
    •   Flow around islands (i.e., closed loops) cannot be directly accommodated
    •   Only one junction or local inflow point is allowed between any two cross sections.


Application History
See available references.


Model Evaluation
Results of model testing and evaluation are reported extensively by HEC (1986, 1990a, 1990b, and 1991a).


Model Inputs
    •   Stream cross-sectional geometry and longitudinal elevation information
    •   Sediment particle characteristics
    •   Time series data of boundary inflows and sediment loading assumptions


Users' Guide
HEC-6, Scour and Deposition in Rivers and Reservoirs, User's Manual (HEC, 1991a). Available online:
http://www.hec.usace.armv.mil/software/legacvsoftware/hec6/hec6-documentation.htm.


Technical Hardware/Software Requirements

Computer hardware:
The minimum hardware requirements include
    •   570 KB of RAM
    •   20 MB of free disk space


Operating system:
PC-DOS. Two editions of the HEC-6 program are distributed in the HEC-6 package: "overlayed" and "extended
memory." While the  basic programs are the same, the extended memory version runs faster and provides for up to
500 cross sections in a 10-stream network, whereas the overlayed version only allows 150 sections. The overlayed
version operates within the DOS 640K limit (570Kb RAM). The extended memory version requires a 386 (or better)
computer with 2-4MB extended memory and a math co-processor.


Programming language:
FORTRAN
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                                                                         Appendix A: Model Fact Sheets
Runtime estimates:
Minutes to hours


Linkages Supported
HEC-DSS


Related Systems
HEC-6T, HEC-2


Sensitivity/Uncertainty/Calibration
HEC  (1991a) provides  a description of the sensitivity of simulated bed profile changes to  various input data
uncertainties.  A qualitative assessment of the sensitivity of model results to field data (geometry, sediment and
hydrology) is presented in the manual. HEC (1991a) also reports results of analyses of sensitivity to cross sections,
movable bed limits, roughness, bed material gradation, inflowing load, flow record, rating curve, and temperature.
Additional results of model sensitivity analyses to bed roughness is reported by HEC (1992). Apart from sensitivity,
HEC (1986 and 1991a), USACE (1992), and Gee (1984) provide detailed descriptions and guidance in calibration
and selection of hydraulic and sediment modeling parameters.


Model Interface Capabilities
HEC-DSS (HEC, 1990c) can be used for managing and displaying time series data when simulating for long time
periods.


References
Gee, Michael. 1984. Role of Calibration  in the Application  of HEC-6. Technical Paper No.  102. Hydrologic
Engineering Center, Davis, CA.

MBH Software, Inc. 2002.  Sedimentation In Stream  Networks  (HEC-6T) - User Manual. (Computer program
manual). Available at http://www.mbh2o.com/docs.html

U.S. Army Corps of Engineers, Hydrologic Engineering Center (HEC). 1986. Accuracy of Computed Water Surface
Profiles. Research Document No. 26. U.S. Army Corps of Engineers, Hydrologic Engineering Center, Davis, CA.

U.S. Army  Corps of Engineers, Hydrologic Engineering Center (HEC).  1990a. Computing Water Surface Profiles
with HEC-6 on a Personal  Computer. Training Document No.  26. U.S. Army  Corps  of Engineers, Hydrologic
Engineering Center, Davis, CA..

U.S. Army Corps of Engineers, Hydrologic Engineering  Center  (HEC). 1990b. HEC-2,  Water  Surface Profiles
User's Manual. U.S. Army Corps of Engineers, Hydrologic Engineering Center, Davis, CA.

U.S. Army  Corps of Engineers, Hydrologic Engineering Center (HEC).  1990c. HECDSS User's Guide and Utility
Program Manuals. CPD-45. U.S. Army Corps of Engineers, Hydrologic Engineering Center, Davis, CA.

U.S. Army  Corps of Engineers, Hydrologic Engineering Center  (HEC).  1991a. HEC-6, Scour and Deposition in
Rivers and Reservoirs,  User's Manual. U.S. Army Corps of Engineers, Hydrologic Engineering Center (HEC),
Davis, CA.

U.S. Army  Corps of Engineers, Hydrologic Engineering  Center (HEC). 1991b.  HEC-2,  Water Surface Profiles:
User's Manual. U.S. Army Corps of Engineers, Hydrologic Engineering Center (HEC), Davis, CA.

U.S. Army Corps of Engineers, Hydrologic Engineering Center (HEC). 1992. Guidelines for the Calibration and
Application of Computer Program HEC-6.  Training Document No. 13. U.S. Army  Corps of Engineers, Hydrologic
                                                229

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                                                                         Appendix A: Model Fact Sheets
Engineering Center, Davis, CA. Available at http://www.hec.usace.army.mil/software/legacvsoftware/hec6/td 13-
documentation. htm)

U.S. Army Corps of Engineers (USACE). 1992. River Hydraulics.  DRAFT EM 1110-2-1415. U.S. Army Corps of
Engineers, Washington, D.C.
                                                230

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                                                                       Appendix A: Model Fact Sheets
    HEC-HMS: Hydraulic Engineering Center Hydrologic Modeling System


Contact Information
U.S. Army Corps of Engineers
Institute for Water Resources
Hydrologic Engineering Center
609 Second Street
Davis, CA 95616-4687
(530)756-1104
hec.webmaster(@,usace.armv.mil
http://www.hec.usace.armv.mil/software/hec-hms/hechms-hechms.html


Download Information
Availability: Nonproprietary
Cost: N/A

HEC-HMS was developed for the U.S. Army Corps of Engineers, but the model program files, executables, and
documentation are available  for free  download by  the public at the website above. However, the Hydrologic
Engineering Center (HEC) of the U.S. Army Corps of Engineers will not provide user support to non-Corps users. In
addition, public distribution of the model source code is generally discouraged by HEC.


Model Overview/Abstract
The Hydrologic Engineering Center (HEC) of the U.S. Army Corps of Engineers released the Hydrologic Modeling
System (HEC-HMS) (HEC, 2001a) for rainfall-runoff simulation as a successor to HEC-1 (HEC, 1998). This model
includes many of the watershed  runoff and routing computation methods  of HEC-1 but also  includes  many
additional capabilities, including continuous hydrograph simulation over longer periods of time, distributed runoff
computation using a grid cell representation of the watershed, a  GUI, integrated hydrograph analysis tools, data
storage and management tools, and graphics and reporting packages. HEC  (200 Ib) reports specific differences
between HEC-HMS and HEC-1.

HEC-HMS is specifically designed for simulation of rainfall-runoff processes of networking watershed systems. The
modeling system includes many modernized and expanded algorithms from previous HEC models, including HEC-
1, HEC-1F (HEC, 1989), PRECIP (HEC, 1989), andHEC-IFH (HEC, 1992).


Model Features
Modeling components
    •  Losses
    •  Runoff transform
    •  Open-channel routing
    •  Analysis of meteorologic data
    •  Rainfall-runoff simulation
    •  Parameter estimation
    •  Reservoir system simulations

User interface includes
    •  File management
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                                                                           Appendix A: Model Fact Sheets
    •   Data entry and editing
    •   Basin mapping for model configuration and data input and access
    •   Tabular and graphical display of input and output data


Model Areas  Supported
Watershed              Low
Receiving Water         Low
Ecological              None
Air                     None
Groundwater            Low


Model Capabilities

Conceptual basis
HEC-HMS is designed to simulate the rainfall-runoff processes of networked watershed systems. This model serves
as the successor  to HEC-1, providing a user interface and improvements and additional capabilities for distributed
modeling and continuous simulation. It is designed to be applicable in a wide range of geographic areas for solving
the widest possible range of problems.


Scientific detail
The physical representation of watersheds or basins  and rivers is configured in the model based on representation of
general hydrologic elements, including subbasins, reaches, junctions, reservoirs, diversions, sources, and sinks. The
system encompasses losses, runoff transform, open-channel routing, analysis of meteorological data, rainfall-runoff
simulation, and parameter estimation. A wide array of options is available to simulate losses, including initial and
constant rates, the SCS  curve number method, and the  Green-Ampt method. Runoff transform methods include the
Clark, Snyder, and SCS unit hydrograph techniques. User-specified unit hydrograph ordinates can also be used.
Open-channel  routing methods include the lag method,  Muskingum  method, the modified  Puls method,  the
kinematic  wave method, and the Muskingum-Cunge method. Meteorological data analysis can also be performed in
the model for precipitation and evapotranspiration and includes  various historical and synthetic methods (HEC,
2001).


Model Framework
Each model run combines a basin model, meteorologic model, and control specifications with run options to obtain
results. The system connectivity and physical data describing the watershed are stored in  the basin model. The
precipitation and evapotranspiration data necessary  to simulate watershed processes are stored in the meteorologic
model (HEC, 2001).


Scale

Spatial Scale
    •   One-dimensional


Temporal Scale
    •   User-defined


Assumptions
Multiple  assumptions  are made that reduce the  watershed to  three  separate processes—loss,  transform, and
baseflow.  The number of assumptions is controlled by the hydrologic methods selected by the user for simulation.
HEC (2000) reports specific assumptions for each method and algorithm used in HEC-HMS.
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                                                                        Appendix A: Model Fact Sheets
Model Strengths
    •   Simplified  methods of hydrologic  simulation encourage reduced number  of parameters for model
        calibration.
    •   Capable of modeling common types of hydraulic control structures with appropriate on and off features.
    •   Includes a GUI with pre- and post-processing capabilities.


Model Limitations
    •   Cannot simulate water quality processes
    •   Relatively difficult to use in conjunction with other water quality models
    •   Cannot simulate groundwater levels


Application History
Multiple example model applications are reported by HEC (200la and 2002). Many algorithms from HEC-1, HEC-
1F, PRECIP, and HEC-IFH have been modernized and combined with new algorithms to form a comprehensive
library of simulation routines in HEC-HMS.


Model Evaluation
See available references.


Model Inputs
    •   Initial conditions and attributes
    •   Inputs from watershed sources and discharges
    •   Element data
    •   Physical coefficients
    •   Time sequences of hydrometeorological conditions


Users' Guide
Hydrologic Modeling System, HEC-HMS: User's Manual (HEC, 200 la). Available online:
http://www.hec.usace.armv.mil/software/hec-hms/documentation/hms user.pdf


Technical Hardware/Software Requirements

Computer hardware:
The minimum hardware requirements for a Microsoft Windows installation includes
    •   Intel 80486 compatible processor
    •   16-MB memory to run the program individually
    •   15-MB available hard-disk space
    •   15-inch VGA monitor
    •   Microsoft compatible mouse

The minimum hardware requirements for a Unix installation includes
    •   64-MB memory to run the program individually
    •   SuperSPARC processor
    •   28-MB available hard-disk space
    •   10-MB available hard-disk space per user
    •   17-inch color monitor


Operating system:
    •   Microsoft Windows 2000, 98, and 95
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                                                                        Appendix A: Model Fact Sheets
    •   Microsoft Windows NT 4.0
    •   Unix 2.5 or higher


Programming language:
FORTRAN


Runtime estimates:
Available intervals range from 1 minute to 24 hours


Linkages Supported
HEC-DSS


Related Systems
HEC-l, HEC-1F, PRECIP, HEC-IFH, HEC-RAS, HEC-DSS


Sensitivity/Uncertainty/Calibration
Not available


Model Interface Capabilities
The  program features  a completely integrated work  environment including  a database,  data  entry utilities,
computation engine, and results reporting tools. A GUI is also included.


References
U.S. Army  Corps of Engineers, Hydrologic Engineering Center (HEC). 1989. Water Control Software: Forecast
and  Operations. (Computer program manual). U.S. Army Corps of Engineers, Hydrologic  Engineering Center,
Davis, CA.

U.S. Army Corps of Engineers, Hydrologic Engineering Center (HEC). 1992. HEC-IFH Interior Flood Hydrology
Package: User's Manual. (Computer program manual). U.S. Army Corps of Engineers, Hydrologic Engineering
Center, Davis, CA.

U.S. Army Corps of Engineers, Hydrologic Engineering Center (HEC).  1998. HEC-l Flood Hydrograph Package:
User's Manual.  (Computer  program manual). U.S. Army Corps of Engineers, Hydrologic  Engineering Center,
Davis, CA.

U.S. Army Corps of Engineers, Hydrologic Engineering Center (HEC). 2000. Hydrologic Modeling System, HEC-
HMS: Technical Reference Manual. CPD-74B. U.S. Army Corps of Engineers, Hydrologic  Engineering Center,
Davis, CA. Available at http://www.hec.usace.armv.mil/software/hec-hms/documentation/hms  technical.pdf.

U.S. Army Corps of Engineers, Hydrologic Engineering Center (HEC). 200la. Hydrologic Modeling System, HEC-
HMS: User's Manual.  CPD-74A.  U.S. Army Corps of Engineers, Hydrologic Engineering Center, Davis, CA.
Available at http://www.hec.usace.armv.mil/software/hec-hms/documentation/hms  user.pdf.

U.S. Army Corps of Engineers, Hydrologic Engineering Center (HEC). 200 Ib. Hydrologic Modeling  System, HEC-
HMS: Differences Between HEC-HMS and HEC-l. CPD-74B. U.S. Army Corps of Engineers, Hydrologic
Engineering Center, Davis, CA. Available at http://www.hec.usace.army.mil/software/hec-
hms/documentation/hms differences.pdf.
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                                                                         Appendix A: Model Fact Sheets
U.S. Army Corps of Engineers, Hydrologic Engineering Center (HEC). 2002. Hydrologic Modeling System, HEC-
HMS: Applications Guide. CPD-74C. U.S. Army Corps of Engineers, Hydrologic Engineering Center, Davis, CA.
Available at http://www.hec.usace.army.mil/software/riec-hms/documentation/hms applications.pdf.
                                                 235

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                                                                       Appendix A: Model Fact Sheets
       HEC-RAS: Hydrologic Engineering Centers River Analysis System


Contact Information
U.S. Army Corps of Engineers
Institute for Water Resources
Hydrologic Engineering Center
609 Second Street
Davis, CA 95616-4687
(530)756-1104
hec.webmaster(@,usace.armv.mil
http://www.hec.usace.armv.mil/software/hec-ras/hecras-hecras.html


Download Information
Availability: Nonproprietary
Cost: N/A

HEC-RAS was developed for the U.S. Army Corps of Engineers, but the model program files, executables, and
documentation are available for free download by the public at the website above. However, the Hydrologic
Engineering Center (HEC) of the U.S. Army Corps of Engineers will not provide user support to non-Corps users. In
addition, public distribution of the model source code is generally discouraged by HEC.


Model Overview/Abstract
The Hydrologic Engineering Center (HEC) of the U.S. Army Corps of Engineers released the River Analysis
System (HEC-RAS) (HEC, 2002a and 2002b) for one-dimensional steady  and  unsteady flow simulation and
sediment transport/moveable boundary conditions. HEC-RAS is designed to  perform one-dimensional hydraulic
calculations for a full network of natural and constructed channels. The  model expands on methods from previous
models for steady and unsteady flow simulation, including HEC-2 (HEC, 1991) and UNET (Barkau, 1992; HEC,
1997) and provides additional capabilities for simulation of bridge scour.


Model Features
Hydraulic analysis components
    •  Steady flow water surface profiles
    •  Unsteady flow simulation
    •  Sediment transport/moveable boundary computations

User interface includes
    •  File management
    •  Data entry and editing
    •  Hydraulic analyses
    •  Tabular and graphical display of input and output data
    •  Reporting facilities

Model Areas Supported
Watershed             None
Receiving Water        Low
Ecological             None
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                                                                          Appendix A: Model Fact Sheets
Air                     None
Groundwater            None


Model Capabilities

Conceptual basis
HEC-RAS is an integrated system composed of a GUI, separate hydraulic analysis components, data storage and
management capabilities,  graphics, and reporting facilities. The system ultimately contains three one-dimensional
hydraulic analysis components for (1) steady flow water surface profile computations, (2) unsteady flow simulation,
and (3) moveable  boundary sediment transport computations. All three components use a common geometric data
representation and common geometric and hydraulic computation routines. In addition, the system contains several
hydraulic design features that can be invoked once the basic water surface profiles are computed.


Scientific detail
The steady flow component is capable of modeling subcritical, supercritical, and mixed flow regime water surface
profiles. The basic computational procedure is based on the solution of a one-dimensional energy equation. Energy
losses are evaluated by friction and contraction/expansion. The momentum equation is utilized in situations where
the water surface profile is rapidly varied.

The model can perform mixed flow  regime  calculations in the unsteady flow computations  module,  based on
methods  adapted  from UNET (Barkau,  1992; HEC,  1997). For HEC-RAS, the hydraulic calculations for cross
sections and hydraulic structures (e.g., bridges and culverts) that were developed for steady flow simulation were
incorporated in the unsteady flow module.

The sediment transport/movable boundary computations are based on methods reported by the Federal Highway
Administration (1995 and 1996). This module includes one-dimension calculation of sediment transport potential
based on grain size distribution and results of the hydraulic model. The current version of HEC-RAS (Version 3.1)
is limited to short-term analyses of scour at piers and abutments. However, the current version does not include
long-term analysis of aggregation and degradation.


Model Framework
Model supports the following analyses:
    •   River flow simulation
    •   Floodway encroachment analysis
    •   Bridge scour simulation
    •   Channel hydraulic design


Scale

Spatial Scale
    •   One-dimensional


Temporal Scale
    •   User-defined


Assumptions
Key assumptions in model development are definition of channel geometry and flow path for model configuration.
Cross-sectional  assumptions  include consideration of effective and ineffective flow areas,  longitudinal slope,
overflow of floodplains, and considerations to channel roughness. Inherent assumptions of the model based on
theoretical formulations and requirements for model  parameterization are reported by HEC (2002a and  2002b).
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                                                                       Appendix A: Model Fact Sheets
Additional assumptions are related to inflows required for modeling analyses, which are determined outside of
model development or based on analysis of flow records or results of separate watershed models.


Model Strengths
    •   Capable of modeling common types of hydraulic control structures with appropriate on and off features.
    •   Has a GUI with pre- and post-processing capabilities.


Model Limitations
    •   Cannot simulate  water quality processes  and relatively difficult to use in conjunction with other water
        quality models.
    •   Cannot simulate groundwater levels.


Application History
Multiple example model applications are reported by HEC (2002c).


Model Evaluation
See available references.


Model Inputs
    •   Channel geometric data and assumptions for channel roughness
    •   Flow data and boundary conditions


Users Guide
HEC-RAS, River Analysis System User's Manual (HEC, 2002b).
Available online: http://www.hec.usace.army.mil/software/hec-ras/hecras-document.html


Technical Hardware/Software Requirements

Computer hardware:
The minimum hardware requirements for a Microsoft Windows installation includes
    •   Intel-based PC or compatible machine with Pentium processor or higher
    •   40-MB available hard disk space
    •   32-MB of RAM if using Windows 95, 98, ME or 64-MB of RAM using Windows NT, 2000, or XP
    •   Color video display


Operating system:
    •   Microsoft Windows XP, 2000, 98, 95, or later editions
    •   Microsoft Windows NT 4.0


Programming language:
FORTRAN


Runtime estimates:
Available intervals range from 1 minute to 24 hours
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                                                                        Appendix A: Model Fact Sheets
Linkages Supported
HEC-DSS


Related Systems
HEC-2, UNET, HEC-HMS, HEC-DSS


Sensitivity/Uncertainty/Calibration
Not available


Model Interface Capabilities
    •   Pre- and post-processors
    •   Data display tools
    •   Data preparation tools


References
Barkau, R.L.  1992. One-Dimensional  Unsteady Flow Through a Full Network of Open Channels. (Computer
Program). UNET, St. Louis, MO.

Federal Highway Administration (FHWA).  1995. Evaluating Scour at Bridges. HEC No.  18, Publication No.
FHWA-IP-90-017, 3rd Edition. Federal Highway Administration Washington, DC.

Federal Highway Administration (FHWA). 1996. Channel Scour at Bridges in the United States. Publication No.
FHWA-RD-95-185. Federal Highway Administration, Washington, DC.

U.S. Army Corps of  Engineers, Hydrologic Engineering  Center (HEC). 1991. HEC-2,  Water Surface Profiles:
User's Manual. U.S. Army Corps of Engineers, Hydrologic  Engineering Center, Davis, CA.

U.S. Army Corps of Engineers, Hydrologic Engineering Center (HEC). 1997. UNET, One-Dimensional Unsteady
Flow Through a Full Network of Open Channels: User's Manual. (Computer program manual). U.S. Army Corps of
Engineers, Hydrologic Engineering Center, Davis, CA.

U.S. Army Corps of Engineers, Hydrologic Engineering Center (HEC). 2002a. HEC-RAS, River Analysis System
Hydraulic Reference Manual. U.S. Army Corps of Engineers, Hydrologic Engineering Center, Davis, CA. Available
at http ://www. hec .usace .army. mil/software/hec-ras/hecras-document. html

U.S. Army Corps of Engineers, Hydrologic Engineering Center (HEC). 2002b. HEC-RAS, River Analysis System
User's Manual. U.S. Army  Corps of Engineers,  Hydrologic Engineering Center, Davis, CA.  Available at
http://www.hec.usace.armv.mil/software/hec-ras/hecras-document.html

U.S. Army Corps of Engineers, Hydrologic Engineering Center (HEC). 2002c. HEC-RAS, River Analysis System
Applications Guide. U.S. Army Corps of Engineers, Hydrologic Engineering Center, Davis, CA.  Available at
http://www.hec.usace.armv.mil/software/hec-ras/hecras-document.html
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                                                                     Appendix A: Model Fact Sheets
  HSCTM-2D: Hydrodynamic, Sediment, and Contaminant Transport Model


Contact Information
Model Distribution Coordinator
Center for Exposure Assessment Modeling (CEAM)
U.S. Environmental Protection Agency
960 College Station Road
Athens, GA 30605-2700
(706) 355-8400
ftp://ftp.epa.gov/epa ceam/wwwhtml/ceamhome.htm


Download Information
Availability: Nonproprietary
http://www.epa.gov/ceampubl/swater/hsctm2d/index.htm
Cost: N/A


Model Overview/Abstract
HSCTM-2D is a single model that incorporates internally linked hydrodynamic, sediment transport and contaminant
transport and fate simulation components. HSCTM-2D (Hayter et al., 1998) uses a two-dimensional finite element
formulation and incorporates the RMA2 hydrodynamic model (King, 1990) and the CSTM-H sediment transport
model (Hayter and Mehta,  1986) extended to  include  sorptive contaminants. Horizontal water column transport
includes advection and shear dispersion. The model can be applied rivers, lakes, estuaries, and coastal waters.


Model Features
   •   Hydrodynamics
   •   Sediment transport
   •   Contaminant transport


Model Areas Supported
Watershed             None
Receiving Water        High
Ecological             None
Air                   None
Groundwater           None


Model Capabilities

Conceptual Basis
HSCTM2D is a finite element modeling system for simulating two-dimensional, vertically integrated, surface water
flow (typically riverine or estuarine hydrodynamics), sediment transport, and contaminant transport. The modeling
system consists of two modules,  one for hydrodynamic modeling (HYDRO2D) and the other for sediment and
contaminant transport modeling (CS2D). One example problem is included. The HSCTM2D modeling system may
be used to simulate both short-term (less  than 1 year)  and  long-term scour and/or sedimentation rates and
contaminant transport and fate in vertically well mixed bodies of water.
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                                                                          Appendix A: Model Fact Sheets
Scientific Detail
The hydrodynamic module HYDRO2D simulates two-dimensional, depth-averaged flow of surface waters. The
governing equations, eqs. 3.1, 3.7, and3.8, are solved by the Galerkin method of weighted residuals using the finite
element method, as described in Section 4. The depth-averaged velocities in the two horizontal directions and the
flow depth are computed at each node. In addition, continuity can be checked across multiple cross sections. The
effects of bottom, internal, and surface shear stresses and the Coriolis force are simulated in HYDRO2D. Bottom
and surface stresses are due to friction; internal stresses are the results of turbulence. The module can simulate both
steady state and dynamic flows.

The cohesive sediment transport model CS2D is a time varying,  two-dimensional finite element model that is
capable of predicting the  horizontal and temporal variations in the depth-averaged suspended cohesive sediment
concentrations and bed surface elevations in an estuary, coastal waterway, or river (Hayter and Mehta, 1986). In
addition, it can be used to predict the  steady state or unsteady transport of any conservative or  nonconservative
constituent if the reaction rates are known. CS2D simulates the advection and dispersion of suspended constituents,
aggregation, and deposition to  and erosion from the bed of cohesive sediments. Hayter (1983) describes a series of
experiments that were used to partially validate the model.


Model Framework
    •   Depth average finite element


Scale

Spatial Scale
    •   Two-dimensional in horizontal


Temporal Scale
    •   Dynamic


Assumptions
    •   Based  on accepted formulations of the two-dimensional,  depth-averaged hydrodynamic equations and
        conservative transport equation


Model Strengths
    •   Strong capabilities for hydrodynamics and sediment transport in vertically mixed waterbodies


Model Limitations
    •   Two-dimensional, vertically averaged homogeneous flow
    •   Will not accurately simulate supercritical flow
    •   Based on a streamwise bottom slope that is mild and not steeper than (01:10)


Application History
The model has been applied to the Maurice River and Union Lake in New Jersey (Hayter and Gu, 1998).


Model Evaluation
None


Model Inputs
ForHYDRO2D
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                                                                        Appendix A: Model Fact Sheets
    •   Program operation data
    •   Grid geometry data
    •   Initial conditions data
    •   Boundary conditions data

For CS2D:
    •   Program operation data
    •   Grid geometry data
    •   Nodal velocities and salinities
    •   Initial conditions
    •   Boundary conditions
    •   Parameters describing the erosional and depositional behavior of the cohesive sediment as well as the
        structure of the bed and contaminant partition coefficients and decay rates.


Users' Guide
Available online http://www.epa.gov/ceampubl/swater/hsctm2d/USERMANU.PDF


Technical Hardware/Software Requirements

Computer hardware:
    •   PC and UNIX workstations


Operating system:
    •   Windows  or UNIX


Programming language:
    •   FORTRAN


Runtime estimates:
    •   Compute intensive with slower run times than similar two-dimensional finite difference models
    •   Run time is  highly dependent on computer hardware,  model domain spatial resolution, the period of
        prototype  conditions simulated,  and  other options, such as  whether  the model is  simulation-only
        hydrodynamic or hydrodynamics and the fate and transport of dissolved and suspended material. Under this
        wide range of variability, simulations could require minutes to weeks.


Linkages Supported
None


Related Systems
None


Sensitivity/Uncertainty/Calibration
No sensitivity, uncertainty, or calibration capabilities directly incorporated into model


Model Interface Capabilities
None
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                                                                          Appendix A: Model Fact Sheets
References
Hayter,  E.J.,  and AJ.  Mehta.  1982.  Modeling of Estuarial Fine Sediment  Transport for Tracking Pollutant
Movement. UFL/COEL-82/009.  Coastal  and Oceanographic  Engineering  Department,  University of Florida,
Gainesville, Florida.

Hayter,  E. I, and  A. J. Mehta. 1986. Modelling cohesive sediment transport in estuarial waters. Appl. Math.
Modelling. 10:294-303.

Hayter, E.J., M. Bergs, R. Gu, S. McCutcheon, S. J. Smith, and H. J. Whiteley.  1998. HSCTM-2D, a finite element
model for depth-averaged hydrodynamics, sediment and contaminant transport. Technical Report. U. S. EPA
Environmental Research Laboratory, Athens, Georgia.

Hayter,  E.J., and R. Gu. 1998. Prediction of contaminated sediment transport  in the Maurice River-Union Lake,
New Jersey. Paper presented at 5th International Conference on Cohesive Sediment Dynamics, May, 1998, Seoul,
Korea.
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                                                                     Appendix A: Model Fact Sheets
  HSCTM-2D: Hydrodynamic, Sediment, and Contaminant Transport Model


Contact Information
Model Distribution Coordinator
Center for Exposure Assessment Modeling (CEAM)
U.S. Environmental Protection Agency
960 College Station Road
Athens, GA 30605-2700
(706) 355-8400
ftp://ftp.epa.gov/epa ceam/wwwhtml/ceamhome.htm


Download Information
Availability: Nonproprietary
http://www.epa.gov/ceampubl/swater/hsctm2d/index.htm
Cost: N/A


Model Overview/Abstract
HSCTM-2D is a single model that incorporates internally linked hydrodynamic, sediment transport and contaminant
transport and fate simulation components. HSCTM-2D (Hayter et al., 1998) uses a two-dimensional finite element
formulation and incorporates the RMA2 hydrodynamic model (King, 1990) and the CSTM-H sediment transport
model (Hayter and Mehta,  1986) extended to  include  sorptive contaminants. Horizontal water column transport
includes advection and shear dispersion. The model can be applied rivers, lakes, estuaries, and coastal waters.


Model Features
   •   Hydrodynamics
   •   Sediment transport
   •   Contaminant transport


Model Areas Supported
Watershed             None
Receiving Water        High
Ecological             None
Air                   None
Groundwater           None


Model Capabilities

Conceptual Basis
HSCTM2D is a finite element modeling system for simulating two-dimensional, vertically integrated, surface water
flow (typically riverine or estuarine hydrodynamics), sediment transport, and contaminant transport. The modeling
system consists of two modules,  one for hydrodynamic modeling (HYDRO2D) and the other for sediment and
contaminant transport modeling (CS2D). One example problem is included. The HSCTM2D modeling system may
be used to simulate both short-term (less  than 1 year)  and  long-term scour and/or sedimentation rates and
contaminant transport and fate in vertically well mixed bodies of water.
                                              240

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                                                                        Appendix A: Model Fact Sheets
                 HSPF: Hydrologic Simulation Program FORTRAN


Contact Information
U.S. Environmental Protection Agency
Office of Water
Office of Science and Technology (430IT)
1200 Pennsylvania Avenue, N.W.
Washington, DC 20460
basins(@,epa.gov
http://www.epa.gov/ost/ftp/basins/svstem/BASINS3/gww.htm

AQUA TERRA
http://www.aquaterra.com/


Download Information
Availability: Nonproprietary
Cost: N/A


Model Overview/Abstract
HSPF is a  comprehensive package for simulating watershed hydrology and water quality for a wide range of
conventional and toxic organic pollutants. With its predecessors dating back to the 1960s, HSPF is the culminating
evolution of the Stanford Watershed Model  (SWM), watershed-scale  Agricultural Runoff Model (ARM), and
Nonpoint Source Loading Model (NPS) into an integrated basin-scale model that combines watershed processes
with in-stream fate and transport in one-dimensional stream channels. HSPF simulates watershed hydrology, land
and soil contaminant runoff, and sediment-chemical interactions. The model can generate time series results of any
of the simulated processes. Overland sediment may be divided into three  types of sediment (sand, silt, and clay) for
in-stream fate and  transport. Pollutants interact with suspended and bed sediment through soil-water partitioning.
The most recent release is HSPF Version 12, which is distributed as part of the EPA BASINS (Better Assessment
Science Integrating Point and Nonpoint Sources) system.


Model Features
    •   Detailed watershed simulation model
    •   Watershed hydrology
    •   Runoff/sediment/pollutant generation and transport
    •   One-dimensional stream hydrology and transport
    •   Pesticide fate and transport simulation


Model Areas Supported
Watershed              High
Receiving Water         Medium
Ecological              None
Air                    None
Groundwater            Low
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                                                                            Appendix A: Model Fact Sheets
Model Capabilities

Conceptual Basis
In HSPF, a subwatershed is typically conceptualized as a group of various land uses all routed to a representative
stream segment.  Several small subwatersheds and representative streams may be networked together to represent a
larger watershed drainage area. Various modules are available and may be readily activated to simulate various
processes, both on land and in-stream.


Scientific Detail
Land processes for pervious and impervious areas are simulated through water budget, sediment generation and
transport, and water quality constituents' generation and transport. Hydrology is modeled as water balance of soil
(or storage) in different layers as described by the SWM methodology. Interception,  infiltration, evapotranspiration,
interflow, groundwater loss, and overland flow processes are considered and are generally represented by empirical
equations. Sediment production is based on detachment and/or scour from a soil matrix and transport by overland
flow in pervious areas, whereas solids buildup and washoff is simulated for impervious areas. It includes agricultural
components for land-based nutrient and pesticide processes and a special actions block for simulating management
activities. HSPF also simulates the in-stream fate and transport of a wide variety of pollutants, such as nutrients,
sediments,  tracers, dissolved oxygen/biochemical  oxygen demand,  temperature,  bacteria, and  user-defined
constituents.


Model Framework
    •   Hydrologic response unit, subwatershed, and watershed
    •   Simple one-dimensional stream and well-mixed reservoir/lake model


Scale

Spatial Scale
    •   One-dimensional, lumped parameters on a land use or subwatershed  basis


Temporal Scale
    •   User-defined timestep, typically hourly


Assumptions
    •   Land simulation component is a distributed model by land use but ignores the spatial variation within a
        land use in a subwatershed.
    •   For overland flow, model assumes one-directional kinematic-wave flow.
    •   Model also assumes subwatershed and streams as series of reservoirs while routing flows.
    •   The receiving waterbody assumes complete mixing along the width and depth.


Model Strengths
    •   One the few  watershed  models capable of simulating land  processes and receiving water  processes
        simultaneously.
    •   Capable of simulating both peak flow and low flows.
    •   Simulates at a variety of timesteps, including subhourly to 1 minute,  hourly or daily.
    •   Simulates the hydraulics of complex natural and man-made drainage networks
    •   Includes capabilities to address a variable water table.
    •   Simulates results for many locations along a reservoir or tributary.
    •   Includes user-defined model output options by defining the external targets block.
    •   Can be setup as simple or complex, depending on application, requirements,  and data availability.
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                                                                           Appendix A: Model Fact Sheets
Model Limitations
    •   Relies on many empirical relationships to represent physical processes.
    •   Lumps simulation processes for each land use type at the subwatershed level (i.e., does not consider the
        spatial location of one land parcel relative to another in the watershed). The model approaches a distributed
        model when smaller subwatersheds are used; however, this may result in increased model complexity and
        simulation time.
    •   Requires extensive calibration.
    •   Requires a high level of expertise for application.
    •   Is limited to well-mixed rivers and reservoirs and one-directional flow.


Application History
The modeling concept had its debut in the  early 1960s as the Stanford Watershed Model. During the  1970s, water
quality processes were added. A FORTRAN version was developed in the late 1970s, incorporating several related
models and software engineering design and development concepts funded by EPA's research laboratory in Athens,
GA.  In the  1980s, pre- and post-processing software, algorithm enhancements,  and use of the USGS binary
Watershed Data Management (WDM) system were developed jointly by the USGS and EPA. Since 1980, all model
code changes have been maintained by Aqua Terra Consultants, under contract with EPA and USGS. During the
mid to late 1990s, Tetra Tech, Inc., under contract with EPA developed the BASINS system and NPSM, resulting in
the first Windows-based interface for the HSPF  model. The current  supported model  release is  Version  12,
distributed with BASINS 3.0 as  the  WinHSPF  model and interface. HSPF is a proven and  tested continuous
simulation watershed model. It is one of the models recommended by the EPA for complex TMDL studies. The
HSPF model has been widely used and its application has been documented throughout its development cycle.


Model Evaluation
HSPF has been widely reviewed and applied throughout its long recent history (Hicks, 1985; Ross et al.,  1997; and
Tsihrintzis et al., 1996). One of the largest applications of the model was to the Chesapeake Bay Watershed, as part
of the EPA's Chesapeake Bay Program's management initiative (Donigian, 1990,  1992). Tsihrintzis  et al. (1994,
1995) applied HSPF in a GIS shell (using ARC/INFO) to evaluate the impact of agricultural activities, specifically
transport of sediments, nutrients,  and pesticides, on streams and groundwater in Southern Florida. An extensive
HSPF bibliography has been compiled to document model development and application and is available online at
http://hspf.com/hspfbib.html.


Model Inputs
    •   Continuous meteorological time series records including (at a minimum)
            o   Rainfall
            o   Potential evapotranspiration
    For SNOW simulation, additional required meteorological time series include
            o   Temperature
            o   Wind speed
            o   Solar radiation
            o   Dewpoint temperature
    For additional simulation options, other required meteorological time series may include
            o   Pan evaporation
            o   Cloud cover
    •   Soils data (auxiliary dataset to guide hydrologic  calibration),  pollutant buildup and washoff,  stream
        dimensions or rating curves, and point-source loading inputs
    •   A large number of parameters need to be specified (some default values are available)


Users' Guide
    •   For model documentation, underlying theory, and parameterization, the HSPF users' manual is a
        recommended source (Bicknell et al., 2001).
    •   A browseable Windows help file version of the manual is available at http://hspf.com/pub/hspf/HSPF.chm.
                                                  246

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                                                                         Appendix A: Model Fact Sheets
Technical Hardware/Software Requirements

Computer hardware:
    •   PC


Operating system:
    •   DOS or Windows Operating System


Programming language:
    •   FORTRAN


Runtime estimates:
    •   Seconds to minutes or hours, depending on spatial/temporal resolution and computer performance


Linkages Supported
CE-QUAL-W2


Related Systems
WinHSPF, an interface to HSPF, is a key component of Better Assessment Science Integrating point and Nonpoint
Sources (BASINS) Version 3.0. BASINS 3.0 was developed for the U.S. Environmental Protection Agency's Office
of Water to respond to the continued needs of various agencies to perform watershed and water quality assessments,
integrating point and nonpoint sources.

LSPC, another interface to HSPF, is available through the EPA Modeling Toolbox
(http://www.epa.gov/athens/wwqtsc/index.html).


Sensitivity/Uncertainty/Calibration
HSPFParm is a free HSPF parameter database distributed with EPA's BASINS System. The software is installed
independent of the BASINS system. It provides regionalized model parameters for published applications across the
United States. It serves as a good starting point for parameter selection during model setup and calibration.

The Expert System for calibration of HSPF (HSPEXP) is  an interactive program that evaluates modeled versus
observed time series using over 35  rules and some 80  conditions (Lumb,  1994). It uses Artificial Intelligence
techniques, incorporating expert advice, based on statistics and evaluation results, to recommend which parameters
should be adjusted.

The Parameter Estimation software package (PEST) is a model calibration aid that can be run in conjunction with
HSPF (Doherty, 2003). The objective function's  goal is  to minimize the least squares of the difference between
modeled and observed flow by  varying model parameters over a range that the user defines. PEST then  iterates
through a series of HSPF model runs, changing selected parameters and rerunning the model, until the objective is
satisfied.


Model Interface Capabilities
Using the HSPF Model requires at least two  files: the User Control Input File (UCI) for parameters and  control
specifications and a WDM file for time series. When run by itself, the UCI text file serves as the interface for the
HSPF model.
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                                                                          Appendix A: Model Fact Sheets
The WinHSPF interface, first distributed with BASINS 3.0, provides an interactive interface to HSPF in a Windows
environment. WinHSPF may be used for creating a new HSPF input sequence or for modifying an existing HSPF
input sequence. The program HSPF may be run from within WinHSPF. Input sequences may be modified and saved
under another name, thus creating simulation scenarios.


References
Bicknell, B.R., J.C.  Imhoff,  J.L. Kittle, Jr., T.H. Jobes,  and  A.  S. Donigian, Jr. 2001.  HYDROLOGICAL
SIMULATION PROGRAM - FORTRAN, Version 12, User's Manual. (Computer program manual). AQUA TERRA
Consultants.

Doherty, John, and John M. Johnston. 2003.  Methodologies for calibration and predictive analysis of a watershed
model. J. American Water Resources Association. 39(2):251-265.

Donigian, A.S. Jr., and A.S. Patwardhan. (1992). Modeling nutrient loadings from croplands in the  Chesapeake Bay
Watershed. In Proceedings of water resources sessions at Water Forum '92, Baltimore, Maryland, August 2-6,
1992, pp. 817-822.

Donigian, A.S., Jr., B.R. Bicknell, L.C. Linker, J. Hannawald, C. Chang, and R. Reynolds. 1990.  Chesapeake Bay
Program Watershed Model application to calculate bay nutrient loadings: preliminary Phase I findings and
recommendations. Prepared for the U. S. Chesapeake Bay Program, Annapolis, MD by AQUA TERRA consultants.

Donigian, A.S., Patwardhan, A.S., and R.M.  Jacobson. 1996. Watershed Modeling of Pollutant Contributions and
Water Quality in the Le Sueur  Basin of Southern Minnesota. In Proceedings of Watershed 96, Baltimore, MD, June
8-12, 1996.

Hicks,  C.N. 1985. Continuous  Simulation of Surface and Subsurface Flows in Cypress Creek Basin, Florida, Using
Hydrological Simulation Program - FORTRAN (HSPF). Water Resources Research Center, University  of Florida,
Gainesville, FL.

Lumb,  A.M.,  McCammon, R.B.,  and Kittle, J.L.,  Jr.  1994. Users manual for an expert system (HSPEXP) for
calibration of the Hydrologic  Simulation  Program—FORTRAN. U.S.  Geological  Survey Water-Resources
Investigations Report 94-4168. U.S. Geological Survey.

Moore, L.W.,  C. Y.  Chew, R.H. Smith, and S.  Sahoo.  1992. Modeling of Best Management Practices on North
Reelfoot Creek, Tennessee. Water Environment Research. 64(3):241-247.

Ross,  M.A., P.O. Tara, J.S.  Geurink, and M.T.  Stewart. 1997. FIPR Hydrologic Model:  Users Manual and
Technical Documentation. Prepared for Florida Institute of Phosphate Research, Bartow,  FL, and Southwest Florida
Water Management District, Brooksville, FL by University of South Florida, Tampa, FL.

Scheckenberger, R.B., and A.S. Kennedy.  1994. The use of HSPF in subwatershed planning. In Current practices in
modelling the management of stormwater impacts, ed. W. James. Lewis Publishers, Boca Raton, FL. pp. 175-187.

Tsihrintzis, V.A., H.R.  Fuentes and R. Gadipudi. 1996. Modeling Prevention Alternatives for Nonpoint Source
Pollution at a Wellfield in Florida. Water Resources Bulletin, Journal of the American Water Resources Association
(AWRA). 32(2):317-331.

Tsihrintzis, V., H. Fuentes, and R. Gadipudi.  1995. Modeling prevention alternatives for nonpoint source pollution
at a wellfield in Florida. Water Resources Bulletin. 32(2):317-331.

Tsihrintzis, V., H. Fuentes, and R. Gadipudi.  1994. Interfacing GIS and water quality models for agricultural areas.
Hydraulic Engineering '94, ed. G. Cotroneo andR. Rumer, ASCE,1, pp 252-256.
                                                 248

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                                                                        Appendix A: Model Fact Sheets
               KINEROS2: Kinematic Runoff and Erosion Model v2


Contact Information
U.S. Department of Agriculture
Agricultural Research Service
Southwest Watershed Research Center
2000 E.Allen Road
Tucson, Arizona 85719
(520)670-6381
http://www.tucson.ars.ag.gov/kineros/


Download Information
Availability: Nonproprietary
Cost: N/A


Model Overview/Abstract
KINEROS2 is the upgrade from an earlier version called KINEROS (Woolhiser, et al., 1990). The model is an
event-oriented, physically based model that describes the processes of interception, infiltration, surface runoff, and
erosion from small agricultural and urban watersheds (USDA, 2003). The model represents a watershed by an
abstraction into a tree-like network sequence of planes and channels and solves the partial differential equations
describing overland flow,  channel flow,  erosion,  and sediment transport by using finite-difference techniques.
Spatial variation of rainfall, infiltration, runoff, and erosion parameters can be accommodated. The model allows
pipe flow and pond elements as well as infiltrating surfaces and includes a partially paved element to use in urban
area simulation. KINEROS can be used to  determine the effects  of various artificial features, such as urban
developments, small detention  reservoirs, or lined channels, on flood hydrographs and sediment yield. This model is
suitable for small agricultural and disturbed urban watersheds.


Model Features
    •  Overland flow and channel flow
    •  Erosion and sediment  transport


Model Areas Supported
Watershed              High
Receiving Water         Low
Ecological              None
Air                    None
Groundwater            None


Model Capabilities

Conceptual Basis
KINEROS2 represents a watershed as a cascade of planes and sequence of channels.  Multigage rainfall input is
distributed by assigning rain gages to overland flow planes.
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                                                                            Appendix A: Model Fact Sheets
Scientific Detail
KINEROS uses one-dimensional kinematic equations to simulate flow over  rectangular planes and through
trapezoidal open channels, circular conduits, and small detention ponds. Runoff is routed with an implicit finite
difference solution of the kinematic wave equation. The infiltration algorithm is dynamic,  physically based, and
interacting with both rainfall and surface water in transit.  The infiltration capacity is simulated as a function of
infiltrated depth and allows estimation of the soil redistribution behavior by using the pore size distribution index.
Further, as an option, the effect of spatial variation in soil hydraulic conductivity can be simulated by assuming a
normal distribution and a user-defined coefficient of variation. Channel transmission losses are also included in the
model. For overland surfaces, erosion consists of two major components—erosion by splash of rainfall on bare soil
and hydraulic erosion (or deposition) due to the interplay between the shearing force of water on the loose soil bed
and the tendency of soil particle to settle under the force of gravity. The splash erosion is approximated as a function
of the rainfall rate square and a reduction factor representing the ponding water depth. The hydraulic erosion is
simulated by applying a modified Engelund and Hansen equation to calculate the shallow flow transport capacity.
Erosion and flow equations are solved numerically at each timestep and for each particle size. A four-point finite-
difference scheme is used.


Model Framework
    •   Fields/planes and channels


Scale

Spatial Scale
    •   One-dimensional, fields, subwatershed overland
    •   One-dimensional, channel network


Temporal Scale
    •   Variable timestep (normally in minutes)


Assumptions
    •   For overland flow and channel flow routing, it is assumed that backwater and diffusive wave attenuation is
        negligible
    •   Normal distribution of the soil hydraulic conductivity


Model Strengths
    •   Contains a physically based infiltration model that allows estimation of the soil redistribution behavior and
        considers heterogeneity
    •   Simulates both splash erosion and hydraulic erosion
    •   Can represent rainfall spatial variability by assigning different rainfall data to difference elements


Model Limitations
    •   As an event-based  model, does not treat long periods of soil water redistribution, plant growth, and other
        interstorm changes
    •   Does not contain subsurface component
    •   Simulates  sediment only


Application History
USDA-ARS illustrated the  application of KINEROS to simulate  runoff from a 6.3 km2 semiarid experimental
watershed near Tombstone, Arizona.
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                                                                          Appendix A: Model Fact Sheets
Ziegler applied KINEROS2 to modeling erosion on unpaved roads, the results of which are available at
http://www.age.uiuc.edu/s&w/hawaii/Ap30.htm.


Model Evaluation
The  model application done by USDA-ARS-SWRC for  an experimental watershed  near Tombstone,  Arizona,
showed that KINEROS2 could reasonably predict the overall trend of the outflow hydrograph.

The work by Ziegler showed that

        "KINEROS2 can be parameterized to simulate reasonably total discharge, sediment transport, and sediment
        concentration on small-scale road plots, for a range of slopes, during simulated rainfall events. KINEROS2,
        however, did not  accurately predict time-dependent changes in sediment output and concentration. In
        particular, early flush peaks and the temporal decay in sediment output were not predicted, owing to the
        inability of KINEROS2 to model removal of a surface sediment layer of finite depth." (Abstract is available
        at http://www.age.uiuc.edu/s&w/hawaii/Ap30.htm.)


Model Inputs
    •   Overland flow element
            o   Plane geometry (length, width, and slope), Manning's n, Chezy conveyance factor
            o   Canopy cover,  interception depth, average micro topographic relief,  average micro topographic
                spacing
            o   Infiltration-related  parameters including saturated hydraulic  conductivity (Ks), initial  degree of
                soil saturation, coefficient of variation of Ks, mean capillary drive, porosity, pore size distribution
                index, volumetric rock fraction, thickness of soil layers (up to 2 layers)
            o   Rain splash coefficient, soil cohesion coefficient, and particle  class fractions
    •   Channel element
            o   Type (simple or compound) and base flow discharge
            o   Channel geometry  (length, width, bed slope, and bank slopes), Manning's n, Chezy conveyance
                factor
            o   Infiltration-related parameters (same as specified in overland flow element)
            o   Cohesion  coefficient of bed material.
    •   Pond element
            o   Initial storage volume
            o   Volume, surface area, and discharge rating table
            o   Seepage rate
    •   Rainfall file
    •   External flow file (optional)


Users' Guide
Available online: http://www.tucson.ars.ag.gov/kineros/


Technical Hardware/Software Requirements

Computer hardware:
    •   PC


Operating system:
    •   PC-DOS


Programming language:
    •   FORTRAN 77/90
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                                                                      Appendix A: Model Fact Sheets
Runtime estimates:
    •   Seconds to minutes


Linkages Supported
None


Related Systems
BASINS


Sensitivity/Uncertainty/Calibration
Not available


Model Interface Capabilities
    •   Arc View extension to facilitate input data preparation


References
USDA-ARS-Southwest Watershed Research Center. KINEROS2 Documentation.
http://www.tucson.ars.ag.gov/kineros/Docs/Doc.htmlTechnicalManual

Smith, R.E., D.C. Goodrich, and J.N. Quinton. 1995. Dynamic, distributed simulation of watershed erosion: The
KINEROS2 and EUROSEM models. Journal of Soil and Water Conservation. 50(5):517-520.

Woolhiser,  D.A., R.E. Smith and D.C. Goodrich. 1990. KINEROS, A  kinematic runoff and erosion  model:
documentation and user manual. ARS-77. USDA-Agricultural Research Service.
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                                                                       Appendix A: Model Fact Sheets
                     LSPC: Loading Simulation Program in C++


Contact Information
Tim Wool
U.S. Environmental Protection Agency
Office of Research and Development
National Exposure Research Laboratory
Ecosystems Research Division
Watershed and Water Quality Modeling Technical Support Center
960 College Station Road
Athens, GA 30605
(706)355-8312
wool.timfg.epa. gov
http://www.epa.gov/athens/wwqtsc


Download Information
Availability: Nonproprietary
http ://www. epa. gov/athens/wwqtsc/html/lspc. html
Cost: N/A


Model Overview/Abstract
The Loading Simulation Program  in C++ (LSPC) is a watershed modeling system that includes streamlined
Hydrologic Simulation Program FORTRAN (HSPF) algorithms for simulating hydrology, sediment, and general
water quality on land as well as a simplified stream transport model.  It is a EPA-accepted TMDL modeling
application, developed by Tetra Tech, Inc., partially under contract with EPA. A key advantage of LSPC is that it
has no inherent limitations in terms of modeling size or model operations and has been applied to large, complex
watersheds. In addition, the Microsoft Visual C++ programming architecture allows for seamless integration with
modern-day, widely available software such as Microsoft Access and Excel.


Model Features
   •   Watershed modeling
   •   Hydrologic simulation and hydraulic transport
   •   Overland and in-stream sediment simulation
   •   Temperature simulation


Model Areas Supported
Watershed             High
Receiving Water        Medium
Ecological             None
Air                   Medium
Groundwater           Medium
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                                                                            Appendix A: Model Fact Sheets
Model Capabilities

Conceptual Basis
In LSPC, a subwatershed is typically conceptualized as a group of various land uses all routed to a representative
stream segment. Several small subwatersheds and representative streams may be networked together to represent a
larger watershed drainage area. Various modules are available and may be readily activated to simulate various land
and stream processes.


Scientific Detail
Land processes for pervious and impervious areas  are simulated through water budget, sediment generation and
transport, and water quality constituents' generation and transport. Hydrology is modeled as water balance of soil
(or storage)  in different layers as described by the Stanford Watershed  Model (SWM) methodology.  Interception,
infiltration, evapotranspiration, interflow, groundwater loss,  and overland flow processes are considered and are
generally represented by empirical equations. Sediment production is based on detachment and/or scour from a soil
matrix and transport by overland flow in pervious areas, whereas solids buildup and washoff is simulated for
impervious areas. For water quality, buildup and washoff of a quality constituent on a land surface, baseflow-
associated pollutant concentrations,  sediment-associated pollutant load, and soil temperature and heat transfer to
water are available.

For in-stream simulation, the model simulates radiation and heat transfer, conservative substance routing, suspended
solids routing and settling, and general first-order pollutant loss, which is applicable for simulating a wide range of
conservative substances,  such as  fecal coliform bacteria, total nitrogen and phosphorus, and total metals.  The
hydraulic compartment, which determines the advection terms for all of the other components, is based on a time-
interval budget of water volume between inflow from the above reach, user-specified outflows, and discharge to the
next downstream reach.


Model Framework
    •   Watershed hydrologic, sediment, and water  quality
    •   Time series climate-driven, overland, subsurface, and in-stream simulation


Scale

Spatial Scale
    •   Lumped parameters at a land use subwatershed scale
    •   One-dimensional in-stream fate and transport
    •   Capable of simulating many subwatersheds  (100+) over large drainage areas (8-digit HUCs)


Temporal Scale
    •   User-defined timestep, typically hourly


Assumptions
    •   Land simulation component is a distributed model by land use but ignores the spatial variation within a
        land use in a subwatershed.
    •   For overland flow, model assumes one-directional kinematic-wave flow.
    •   Model also assumes subwatershed and streams as series of reservoirs while routing flows.
    •   Model assumes complete mixing along the width and depth of the receiving waterbody.


Model Strengths
LSPC is one the few watershed models that is capable of simulating land processes and receiving water  processes
simultaneously. It is capable of simulating both peak flow and low flows and a variety of timesteps, including sub-
hourly to one minute, hourly or  daily. The model simulates  the hydraulics  of complex natural and man-made
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                                                                           Appendix A: Model Fact Sheets
drainage networks and includes capabilities to address variable water table. A key strength of LSPC model output is
that the model automatically aggregates results and manages the output at a subwatershed or reach-segment level.
The model can be setup as simple or complex, depending on the application requirement and data availability. The
design of the modeling system and supporting databases is particularly well suited for efficient application to large,
complex watersheds. Data management tools support the  evaluation of loading and management within multiple
watersheds simultaneously.


Model Limitations
The model relies on many empirical relations to represent physical processes. For land simulation, processes are
lumped for each land use type at the subwatershed level; therefore, the model does not consider the spatial location
of one land parcel relative to  another in the watershed. The model approaches a distributed model when smaller
subwatersheds are used; however, this may result in increased model size and simulation time. For in-stream
simulation, it is limited  to well  mixed rivers  and reservoirs and one-directional flow.  It requires extensive
calibration. It generally requires a high level of expertise for application.


Application History
LSPC is the key watershed modeling component of the TMDL Toolbox. TMDL's model applications have been
successfully  developed using LSPC in Alabama, Mississippi, South Carolina, Georgia, California, Kentucky,
Tennessee, West Virginia, Virginia, Maryland, Arizona,  Ohio, Montana, Puerto Rico, and U.S. Virgin Islands.
Several recent watershed TMDLs have been done using LSPC. Two are listed as follows:

    •   Published Tennessee TMDL documents may be accessed at the following web address:
        http://www.state.tn.us/environment/wpc/tmdl/approved.php
    •   Published Alabama TMDL documents may be accessed at the following web address:
        http ://www. epa. gov/region4/water/tmdl/alabama/index. htm


Model Evaluation
HSPF, on which LSPC is based, has been widely reviewed and applied throughout its history (Hicks, 1985; Ross, et
al., 1997; and Tsihrintzis, et al.,  1996). Tsihrintzis, et al.,  (1994,  1995)  applied  HSPF in a  CIS shell (using
ARC/INFO) to  evaluate the impact of agricultural activities,  specifically  transport of sediments, nutrients, and
pesticides, on streams and groundwater in Southern Florida.  The underlying HSPF algorithms used in the LSPC
model have been widely used and the applications have been documented over more than 20 years.


Model Inputs
    •   Continuous meteorological time series records including (at a minimum)
            o   Rainfall
            o   Potential evapotranspiration
    For SNOW simulation, additional required meteorological time series include
            o   Temperature
            o   Wind speed
            o   Solar radiation
            o   Dewpoint temperature
    •   Soils data  (auxiliary dataset  to guide  hydrologic calibration), pollutant  buildup  and washoff,  stream
        dimensions or rating curves, and point-source loading inputs
    •   A large number of parameters need to be specified (some default values are available)


Users' Guide
    •   An LSPC Users' Manual (Tetra Tech, 2002) is  available through EPA's  Watershed and Water Quality
        Modeling Technical Support Center.
    •   For model documentation, underlying theory,  and parameterization,  the HSPF users'  manual  is a
        recommended source (Bicknell, et al., 2001).
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                                                                         Appendix A: Model Fact Sheets
    •   A browseable Windows help file version of the manual is available at http://hspf.com/pub/hspf/HSPF.chm.


Technical Hardware/Software Requirements

Computer hardware:
    •   PC (Pentium III or higher recommended, but not required)


Operating system:
    •   Windows 98 or later


Programming language:
    •   C++


Runtime estimates:
    •   Seconds to minutes or hours, depending on spatial/temporal resolution


Linkages Supported
EFDC, WASP, CE-QUAL-W2, EPD-Rivl


Related Systems
HSPF, WinHSPF


Sensitivity/Uncertainty/Calibration
LSPC includes a data analysis component that may be used to quickly compare model output against observed data
in time series  form, as monthly summaries, or on a one-to-one graph. LSPC model output is especially tailored for
spreadsheet use; consequently, many users prefer to develop independent spreadsheet analysis,  summarization,
calibration, and plotting applications, which are readily linked to LSPC model output.

HSPFParm is  a free HSPF parameter database distributed with EPA's BASINS System. The software is installed
independent of the BASINS system. It provides regionalized model parameters for published applications across the
United States.  It serves as a good starting point for parameter selection during model setup and calibration.

The Parameter Estimation software package (PEST) is a model calibration aid that can be  run in conjunction with
HSPF (Doherty, 2003). Although PEST is not currently linked with LSPC, it is a generalized calibration system that
can potentially be  linked to any model. Since parameter values and definitions  in  HSPF  and  LSPC are
interchangeable, results  from a small-scaled HSPF PEST  run can be  used to calibrate LSPC. The objective
function's  goal is to minimize the least squares of the difference between modeled and observed flow by varying
model parameters  over a range that the user defines. PEST then iterates  through a series  of model runs until the
objective is satisfied.


Model Interface Capabilities
When launched from within  the EPA Watershed Characterization System  (WCS), LSPC has an extension for
automatically  setting up the model using GIS information. The LSPC model  interface  has two components: (1) a
stand  alone GIS component,  and (2) a model parameter management component. The LSPC Map Objects GIS
interface, which is compatible with ArcView shapefiles, acts as the control center for managing and launching
watershed  model scenarios. The  stand alone interface communicates with shapefiles and the  underlying Access
database. Therefore, once a watershed system is created, it is easily transferable to users who may not have ArcView
or MS Access. The LSPC model parameter management component can be used either independently on previously
saved model setup files or in conjunction with the GIS component to setup  model scenarios on the fly.
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                                                                          Appendix A: Model Fact Sheets
LSPC also includes a suite of additional tools, including data management tools for editing watershed data, data
inventory tools for reporting and summarizing model inputs and outputs, and data analysis tools for both visualizing
and summarizing model inputs or outputs and observed data. The model  includes a TMDL calculation that allows
the user to specify source-specific allocations and generate corresponding model results for TMDL analysis.


References
Bicknell, B.R., J.C.  Imhoff,  J.L. Kittle, Jr., T.H. Jobes, and A.  S.  Donigian,  Jr. 2001.  HYDROLOGICAL
SIMULATION PROGRAM - FORTRAN, Version 12. (Computer program manual). AQUA TERRA Consultants.

Donigian, A.S. Jr.,  and A.S. Patwardhan. 1992. Modeling nutrient loadings from croplands in the Chesapeake Bay
Watershed. In Proceedings of water resources sessions at Water Forum  '92, Baltimore, Maryland,  August 2-6,
1992, pp. 817-822.

Donigian, A.S., Jr., B.R. Bicknell, L.C. Linker, J. Hannawald, C. Chang, and R.  Reynolds. 1990. Chesapeake Bay
Program Watershed Model application to calculate bay  nutrient loadings: preliminary Phase  I findings and
recommendations. Prepared for the U. S. Chesapeake Bay Program, Annapolis, MD, by AQUA TERRA consultants.

Donigian, A.S., Patwardhan, A.S., and R.M. Jacobson. 1996.  Watershed Modeling of Pollutant Contributions and
Water Quality in the Le Sueur Basin of Southern Minnesota. In Proceedings of Watershed 96, Baltimore, MD, June
8-12, 1996.

Hicks, C.N. 1985. Continuous Simulation of Surface and Subsurface Flows in  Cypress Creek Basin, Florida, Using
Hydrological Simulation Program - FORTRAN (HSPF). Water Resources Research Center, University of Florida,
Gainesville, FL.

Lumb,  A.M., McCammon, R.B.,  and Kittle, J.L.,  Jr.  1994.  Users manual for  an  expert system (HSPEXP) for
calibration  of the Hydrologic  Simulation  Program—FORTRA.  U.S.  Geological  Survey  Water-Resources
Investigations Report 94-4168. U.S. Geological Survey.

Moore, L.W., C. Y. Chew, R.H. Smith, and S. Sahoo. 1992. Modeling  of Best Management Practices on North
Reelfoot Creek, Tennessee. Water Environment Research. 64(3):241-247.

Ross, M.A., P.O.  Tara, J.S. Geurink, and M.T. Stewart. 1997. FIPR Hydrologic Model:  Users Manual and
Technical Documentation. Prepared for Florida Institute of Phosphate Research, Bartow, FL, and Southwest Florida
Water Management District, Brooksville, FL, by University of South Florida, Tampa, FL

Scheckenberger, R.B., and A.S. Kennedy.  1994. The use of HSPF in subwatershed planning. In Current practices in
modelling the management of stormwater impacts, ed. W. James. Lewis Publishers, Boca Raton, FL.  pp. 175-187.

Tsihrintzis, V.A., H.R.  Fuentes and R. Gadipudi.  1996. Modeling Prevention Alternatives for Nonpoint Source
Pollution at a Wellfield in Florida. Water Resources Bulletin, Journal of the American Water Resources Association
(AWRA). 32(2):317-331.

Tsihrintzis, V., H. Fuentes, and R. Gadipudi. 1995. Modeling prevention  alternatives for nonpoint source pollution
at a wellfield in Florida. Water Resources Bulletin. 32(2):317-331.

Tsihrintzis, V., H. Fuentes, and R. Gadipudi. 1994. Interfacing GIS and water quality models for agricultural areas.
Hydraulic Engineering '94, ed. G. Cotroneo and R. Rumer, ASCE,1, pp 252-256.

Tetra Tech, Inc., U.S. Environmental Protection Agency (USEPA). 2002.  The Loading Simulation Program in C++
(LSPC) Watershed Modeling System—Users' Manual.
                                                 257

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                                                                        Appendix A: Model Fact Sheets
   Mercury Loading Model: Watershed Characterization System—Mercury
                                        Loading Model


Contact Information
James Greenfield
U.S. Environmental Protection Agency, Region 4
6IForsyth Street, S.W.
Atlanta, GA 30303-8960
(404) 562-9238
greenfield.j im@epa. gov
http ://wcs .tetratech-ffx. com/Svstem/index. htm


Download Information
Availability: Nonproprietary
http ://wcs .tetratech-ffx. com/Svstem/index. htm
Cost: N/A


Model Overview/Abstract
Watershed-scale Mercury Loading Model is an Arc View 3.x grid-based modeling extension of the Watershed
Characterization System (WCS). The complexity of this loading function model falls between that of a detailed
simulation model, which attempts a mechanistic, time-dependent representation of pollutant load generation and
transport, and simple export coefficient models, which do  not represent temporal variability.  The WCS provides
simulation of precipitation-driven runoff and sediment delivery at a grid-based landscape. Solids load from runoff is
used to estimate pollutant delivery to the receiving waterbody from the watershed. This estimate is based  on
mercury concentrations in wet and dry deposition and processed by soils in the watershed and ultimately delivered
to the receiving waterbody by  runoff, erosion, and direct deposition. The main driving force for the WCS mercury
model  is  the input of the appropriate wet and dry deposition rates or maps for mercury as  well as the climate
condition of a watershed.


Model Features
    •   Arc View GIS grid-based watershed mercury loading calculation
    •   Estimates total annual average mercury load from different sources of a watershed
    •   Model results are summarized in maps and tables that can be incorporated into a WCS automatic report


Model Areas Supported
Watershed              Medium
Receiving Water        None
Ecological              None
Air                    Low
Groundwater            None
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                                                                            Appendix A: Model Fact Sheets
Model Capabilities

Conceptual Basis
The WCS Mercury Loading model is based on a soil-mercury mass balance model, IBM v2.05, developed by EPA's
Office of Health and Environmental Assessment and Environmental Research  Lab, Athens, Georgia. The  soil-
mercury mass balance model was expanded to account for the spatial heterogeneity of a watershed landscape using
Arc View GIS and grid-processing technology.


Scientific Detail
The WCS Mercury Loading model uses three major algorithms to calculate watershed mercury load:

    1. Erosion and sediment transport algorithm  for the calculation  of mercury  load from sediment. The
    algorithm implemented in the model is the same as that used in the sediment budget model described in the
    previous section. USLE is used to calculate  the  erosion potential, and an area-based sediment delivery  ratio
    equation is used as the default formula to calculate the sediment delivery.

    2. Hydrology algorithm for the calculation of mercury load from surface runoff. Monthly rainfall is used to
    calculate the average rainfall amount for rainfall events. The number of rain days is first compiled from selected
    weather stations in EPA Region 4. Rainfall/event  is then derived by dividing monthly rainfall by monthly
    number of rain days. Rainfall/event is used to calculate the runoff using the curve number method developed by
    USDA-NRCS.  The hydrology algorithm also includes the computation of other components  of the water
    balance processes, including evapotranspiration and infiltration.

    3. Chemistry algorithm for the  calculation of  mercury  concentration  in soil (particle phase and water
    phase). U.S.  national  mercury deposition maps were used for atmospheric mercury input. Atmospheric input
    deposits mercury directly on water surfaces, impervious land  surfaces, and pervious land surfaces. For the
    pervious land surface, mercury concentration in soils is calculated using the steps  outlined in Mercury Study
    Report to Congress (USEPA,  1997). The equation for the calculation of the soil mercury concentration can be
    written as:

             Cs = (C0 * e k"kStotal* T) + (D + W) * (1- e "kStotal* T) * 105 / ( zd * BD * ks total)

    where Cs = soil mercury concentration at equilibrium (ng/g or ppb);  C0 = initial (pre -industrial) soil mercury
    concentration (ng/g); k = soil mercury mineralization  rate (yr~ :);  ks totai = soil mercury loss rate (yr"1) from leaching,
    runoff, and erosion; zd = watershed soil incorporation depth or mixing depth (cm); BD = soil bulk density
    (g/cm3); T = deposition period (yr"1); D = annual dry deposition rate (g m"2 yr"1); and W = annual wet deposition
    rate  (g  m"2 yr"1). Based on atmospheric deposition rate and soil mercury concentration, mercury load from
    sediment,  runoff,  and impervious surface, direct  deposition on water can be calculated  for the selected
    subwatersheds in a WCS modeling project. The total watershed mercury load can be written as
                       total ~~ L, erosion ~"~ L, runoff ~"~ L, impervious runoff ~"~ L, water ~"~ L, point source

    where L stands for mercury load.

The final results from the WCS mercury loading model are mercury loading tables and maps. All the loading tables
and maps, as well as results of loading comparison between the different subwatersheds, can be exported to  a
Microsoft Word document using the automated reporting function.


Model Framework
    •   WCS Mercury  Loading Model calculates sediment load, runoff, atmospheric deposition,  and mercury
        concentration in  watershed soils  using grid-based  data (e.g.,  land use and elevation).  The  model
        summarizes mercury load from various sources in each subwatershed of the study area.
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                                                                          Appendix A: Model Fact Sheets
Scale

Spatial Scale
    •   One-dimensional, subwatershed, grid


Temporal Scale
    •   Annual and long-term average


Assumptions
    •   Soil concentrations within a deposition grid are uniform within the  grid and can be estimated by the
        following key parameters: dry and wet contaminant deposition rates, a set of soil transformation rates, a
        soil bulk density, and a soil mixing depth.
    •   The partition of mercury components among soil water and soil particle phases  can be described by
        partition coefficient.
    •   The mercury gas phase in soil is insignificant in the total mercury mass balance, and the mercury reduction
        loss is equal to the volatilization loss.
    •   The total runoff of an area is a simple sum of the runoff of each grid, and there is no mercury loss when it is
        transported from a source cell to the watershed outlet through the runoff.
    •   The sediment transport can be described using an area-based delivery ratio formula.


Model Strengths
    •   Arc View 3.x based, calculates soil mercury concentrations and loading potential grid-by-grid
    •   Model is easy to setup and use
    •   Generates mercury load map showing contributions of different sources
    •   Generates maps and results table in an automatic report


Model Limitations
    •   Calculates only total mercury annual average load
    •   Lacks detailed algorithm for wetlands and forests
    •   Lacks mercury stream transport algorithm
    •   Lacks mercury input from soil parent material and mercury load calculation through shallow groundwater


Application History
The WCS Mercury  Loading model was used to develop mercury TMDLs for the Middle and Lower Savannah River
basins and many other areas in EPA Region 4 (http://www.epa.gov/region4/water/tmdl/general.htm).


Model Evaluation
Model has been tested and evaluated against the original IEM-2M spreadsheet watershed model.  The model was
also published in the Water Environment Federation Specialty Conference in 2002. The model has been applied to
many TMDLs in EPA Region 4 since 2000.


Model Inputs
    •   Mercury atmospheric deposition rate or map
    •   Monthly average precipitation and temperature
    •   Mercury point sources
    •   Land use/cover map
    •   Soil map
    •   Digital elevation model
    •   Stream reach files
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                                                                        Appendix A: Model Fact Sheets
Users' Guide
Available online: http://wcs.tetratech-ffx.com/Documentation/index.htm


Technical Hardware/Software Requirements

Computer hardware:
    •   PC


Operating system:
    •   Microsoft Windows, requires Arc View 3.x and Arc View Spatial Analyst extension


Programming language:
    •   Arc View 3.x and Avenue script


Runtime estimates:
    •   Minutes to less than 1 hour


Linkages Supported
Output can be used with WASP (requires some manual processing)


Related Systems
Watershed Characterization System or WCS (http://wcs.tetratech-ffx.com')
BASINS (http://www.epa.gov/ostwater/BASrNS/')


Sensitivity/Uncertainty/Calibration
Not available. For a calibration example,  see "Total Maximum Daily Load (TMDL) for Total Mercury in Fish
Tissue Residue in the Middle & Lower Savannah River Watershed" (USEPA Region 4, 2001).


Model Interface Capabilities
    •   Arc View 3.x as the user interface
    •   WCS system provides manual and auto delineation tools for watershed delineation
    •   WCS web site has core input datasets available for EPA Region 4, the data can be downloaded by USGS 8-
        digit hydrologic units in Region 4


References
Greenfield J., T. Dai, and H. Manguerra. 2002. Watershed modeling extensions of the watershed characterization
system.  In Proceedings  of the Water Environment  Federation Specialty  Conference,  Watershed  2002, Ft.
Lauderdale, Florida, February, 2002.

Dai, T., andH. Manguerra. 2000. User's Guide for WCS Mercury Tool. TetraTech, Inc., Fairfax, Virginia. Available at
http://wcs.tetratech-ffx.com/Documentation/index.htm

U.S.  Environmental Protection Agency Region 4. 2001. Total Maximum Daily Load (TMDL) for Total Mercury in
Fish  Tissue Residue  in the Middle & Lower Savannah River Watershed. U.S. Environmental Protection Agency
Region 4. Available at http://www.epa.gov/owow/tmdl/examples/mercury.html
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                                                                          Appendix A: Model Fact Sheets
U.S. Environmental Protection Agency (USEPA). 1997. Mercury study report to  congress. EPA-452/R-97-003.
Office of Air Quality, Planning and Standards. Office of Research and Development. Washington, DC. Available at
http://www.epa.gov/oar/mercury.html
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                                                                          Appendix A: Model Fact Sheets
                                            MIKE 11


Contact Information
Peter De Golian
Danish Hyrdrologic Institute, Inc. (DHI)
311 S. Brevard Avenue
Tampa, FL 33606
(813)254-9427
pcg(@,dhigroup.com
www.dhigroup.com


Download Information
Availability: Proprietary
Demo versions available online only.
Cost (if applicable): $3000


Model Overview/Abstract
MIKE  11 is a general river modeling system developed by DHI. MIKE 11 is the most advanced and comprehensive
of its type today, and it is presently used by more than 1500 users around the world. MIKE 11 has become industry
standard in many countries, including Australia, New Zealand, and Bangladesh and in many European countries.
MIKE  11 contains modules for run-off simulations, hydrodynamics, flood forecasting, transport and  dilution of
dissolved substances, sediment transport, and river morphology as well as various water quality processes. MIKE 11
has an interface to  GIS allowing for preparation of model  input and presentation  of model output in a GIS
environment.


Model Features
A modular engineering tool for modeling  conditions in rivers, lakes  and reservoirs,  irrigation canals, and other
inland water systems. It is designed for
    •    Flood risk analysis and mapping
    •    Design of flood alleviation systems
    •    Real-time flood forecasting
    •    Real-time water quality forecasting and pollutant tracking
    •    Hydraulic analysis and design of structures, including bridges
    •    Drainage and irrigation studies
    •    Optimization of river and reservoir operations
    •    Dam break analysis
    •    Water quality issues
    •    Integrated groundwater and surface water analysis


Model Areas Supported
Watershed              Low
Receiving Water        High
Ecological              None
Air                    None
Groundwater            Low
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                                                                           Appendix A: Model Fact Sheets
Model Capabilities

Conceptual Basis
The hydrodynamic module (HD), which is the core of MIKE 11, contains an implicit, finite difference computation
of unsteady flows in rivers and estuaries.  The formulations can be applied to branched and looped networks and
quasi two-dimensional flow simulation on flood plains. The computational scheme is  applicable to vertically
homogeneous flow conditions ranging from steep river flows to tidally influenced estuaries. Both subcritical and
supercritical flow can be described by means of a numerical scheme, which adapts according to the local flow
conditions.

The complete nonlinear equations of open channel flow (Saint-Venant) can be solved numerically between all grid
points at specified time  intervals for given boundary conditions. In addition to this fully dynamic description, a
choice of other flow descriptions is available:

    •   High-order, fully dynamic
    •   Diffusive wave
    •   Kinematic wave
    •   Quasi-steady state
    •   Kinematic routing (Muskingum, Muskingum-Cunge)

Within the standard HD module, advanced computational formulations enable flow over a variety of structures to be
simulated:

    •   Broad-crested weirs
    •   Culverts
    •   Bridges
    •   Pumps
    •   Regulating structures
    •   Control structures
    •   Dam-break structures
    •   User-defined structures
    •   Tabulated structures

The HD module is available in a number of different sizes, which can be upgraded at any time.

Furthermore, a number of add-on modules are available, which ensures that the system can be tailored to suit the
exact requirements.


Scientific Detail
The  MIKE  11  hydrodynamic  module (HD) uses an implicit,  finite difference scheme  for  the computation of
unsteady flows in rivers  and estuaries. The module can describe  subcritical as well as supercritical flow conditions
through a numerical scheme that adapts according  to the local flow conditions (in time and space). Advanced
computational  modules are included for description of flow over  hydraulic structures, including possibilities to
describe structure operation. The formulations can be applied to looped networks and quasi two-dimensional flow
simulation on flood plains. The computational scheme is applicable  for vertically homogeneous flow conditions
extending from steep river flows to tidal influenced estuaries.  The system  has been used in numerous engineering
studies around the world.


Model Framework
MIKE 11 consists of a hydrodynamic core module and a number of add-on  modules,  each simulating certain
phenomena in a river system.
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                                                                           Appendix A: Model Fact Sheets
The modular structure offers great flexibility, because
    •   Each module can be operated separately
    •   Data transfer between modules is automatic
    •   Complex physical processes can be coupled (e.g.,  river morphology, sediment re-suspension and water
        quality)
    •   Updating or expansion of existing installations or models with new modules is simple


Scale

Spatial Scale
    •   One-dimensional model


Temporal Scale
    •   User-defined, variable timestep


Assumptions
The  hydrodynamic module solves the complete nonlinear  St.  Venant equations  for open-channel flow.  It also
includes a quasi-steady state solver for rapid calculation of long-term simulations. The model automatically adapts
to subcritical and supercritical flow and can simulate a wide variety of flow structures, including weirs, culverts,
bridges and user-defined structures. It  also  allows the flexible operation of flood  control and reservoir structures
(e.g., gates and pumps).


Model Strengths
Some of the strengths for the MIKE 11 model include
    •   MIKE  11 has an interface to GIS allowing for preparation of model input and presentation of model output
        in a GIS environment
    •   Easily links up to other MIKE models


Model Limitations
Some of the limitations for the MIKE 11 model include
    •   Need to purchase multiple modules to take full advantage of the system
    •   Significant data needed to setup


Application History
Everglades Agricultural  Area (CERP). The  project was highly demanding on  local knowledge and required
countless educated assumptions to be made with respect to agricultural and reservoir interactions.

Others: http://www.dhisoftware.com/MIKEl 1/News/MIKE 11 Applications.htm


Model Evaluation
http://www.dhisoftware.com/MIKEl 1/News/MIKE  11 Papers.htm


Model Inputs
    •   Graphical data input/editing
    •   Simultaneous input/editing of various  data types
    •   Copy and paste facility for direct import (export) from, e.g., spreadsheet programs
    •   Fully integrated tabular and graphical windows
    •   Importing of river network and topography data from ASCII text files
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                                                                         Appendix A: Model Fact Sheets
    •   User-defined layout of all graphical views (colors, font settings, lines, marker types, etc.)


Users' Guide
Available online: http://www.dhisoftware.com


Technical Hardware/Software Requirements

Computer hardware:
    •   128 Mb DRAM
    •   1 Gb hard drive space
    •   Pentium 200 Mhz minimum


Operating system:
    •   MS Windows 98/2000/NT/XP


Programming language:
    •   None


Runtime estimates:
    •   Depends on CPU


Linkages Supported
Other MIKE models by DHL


Related Systems
DHI series of MIKE models, built on the MIKE Zero interface.


Sensitivity/Uncertainty/Calibration
Built in Auto Calibration tool (http://www.dhisoftware.com/Generic tools/index.htni)


Model Interface Capabilities
MIKE  11  is operated through an efficient Windows-based interactive Graphical User Interface including both
graphical and tabular editing of data. The use of generic editors makes learning easy and efficient. Hence, the time
from learning to production is short.

The advanced graphical facilities enable visual data checking and presentation of the information stored in data files
and time series databases.  The same graphical environment is used for data control, analysis, and presentation of
results.  The graphical presentation includes river  network plan  plots,  cross-sectional  plots,  pre-selection of
longitudinal profiles, time series plots,  comparison  of measured/simulated and simulated/simulated  time series,
animation of flows and water levels on both plans and profiles, control of plotting parameters, etc.


References
DHI Software. Mike 11 References. http://www.dhisoftware.com/MIKEl 1/News/MIKE 11 Papers.htm
                                                266

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                                                                           Appendix A: Model Fact Sheets
                                             MIKE 21


Contact Information
Peter De Golian
Danish Hyrdrologic Institute, Inc. (DHI)
311 S. Brevard Avenue
Tampa, FL 33606
(813)254-9427
pcg(@,dhigroup.com
www.dhigroup.com


Download Information
Availability: Proprietary
Demo versions available online only.
Cost (if applicable): $3000


Model Overview/Abstract
MIKE  21  is a professional engineering  software package containing a comprehensive modeling system for two-
dimensional free-surface flows. MIKE 21 is applicable to the simulation of hydraulic and related phenomena in
lakes, estuaries, bays, coastal areas, and seas where stratification can be neglected.

MIKE 21 provides the design engineer with a unique and flexible modeling environment, using techniques that have
set the standard in 2D modeling.

It is provided with a modern user-friendly interface  facilitating the application of the system. A wide range of
support software for use in data preparation, analysis of simulation results, and graphical presentation is included.

MIKE 21 is the result of more  than 20 years of continuous development and is tuned through the experience gained
from thousands of applications worldwide. DHI continues to use MIKE 21 in its own studies, thus giving a valuable
symbiosis between development and application.


Model Features
MIKE  21  HD  simulates water level  and flow variations  in river channels; on river floodplains (both urban and
rural); and in lakes, estuaries and coastal areas in response to various forcing functions. The water levels and flows
are resolved using a rectangular nested grid or tin or finite volume grid covering the area of interest, using the river
channel and floodplain topography, bed resistance coefficients, and hydrographic boundary conditions.

MIKE 21 HD solves the vertically integrated, fully dynamic equations of continuity and conservation of momentum
in two horizontal directions using implicit finite  difference methods.  The following effects are  included in the
equations:

    •   Convective and cross momentum
    •   Momentum dispersion
    •   Floodplain flooding and drying
    •   Evaporation
    •   Wind shear stress
    •   Supercritical flow
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                                                                           Appendix A: Model Fact Sheets
    •   Hydraulic structures

MIKE 21 HD forms the basis for calculations in additional MIKE 21 modules, describing advection dispersion,
water quality, and sediment transport.


Model Areas Supported
Watershed              Low
Receiving Water         High
Ecological              None
Air                     None
Groundwater            Low


Model Capabilities
MIKE 21 HD simulates water level and flow variations in river channels, on river floodplains (both urban and rural),
and in lakes, estuaries, and coastal areas in response to various forcing functions. The water levels and flows are
resolved using a rectangular  nested grid or tin or finite volume grid covering the area of interest, using the river
channel and floodplain topography, bed resistance coefficients, and hydrographic boundary conditions.

MIKE 21 HD solves the vertically integrated, fully dynamic equations of continuity and conservation of momentum
in two horizontal directions, using implicit finite difference methods. The following effects are included in the
equations:

    •   Convective and cross momentum
    •   Momentum dispersion
    •   Floodplain flooding and drying
    •   Evaporation
    •   Wind shear stress
    •   Supercritical flow
    •   Hydraulic structures

MIKE 21 HD forms the basis for calculations  in additional MIKE 21 modules describing advection dispersion,
water quality, and sediment transport.


Scale

Spatial Scale
In MIKE  21 HD, the floodplain and channel topography are described by  a rectangular grid. The grid size is
specified by the user and should be based on the level of topographical detail to be represented. MIKE 21 HD can be
used to simulate  two-dimensional flooding over a wide, flat, spatial range from small-scale urban situations, with
channels only meters wide, to broad-scale river floodplains of several kilometers' width.


Temporal Scale
The temporal scale of MIKE 21  HD is characterized by its flexibility and is based on the boundary  time series
defined by the user.  MIKE 21 HD  has the flexibility to run short-scale, event-based  time  series or  time series
covering months  or years of flow  simulation. Boundary time series are entered into a database by the user, who also
defines the length and timestep of the series.


Assumptions
MIKE 21 HD solves the vertically integrated, fully dynamic equations of continuity and conservation of momentum
in two horizontal directions. Model parameters for MIKE 21 are
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                                                                          Appendix A: Model Fact Sheets
    •   Bed resistance
    •   Momentum dispersion (eddy) coefficients
    •   Wind friction factor (optional)


Model Strengths
Some of the strengths for the MIKE 21 model include

    •   MIKE 21 has an interface to GIS allowing for preparation of model input and presentation of model output
        in a GIS environment.
    •   Easily links up to other MIKE models.


Model Limitations
Some of the limitations for the MIKE 21 model include

    •   Need to purchase multiple modules to take full advantage of the system.
    •   Significant data needed to setup.


Application History
MIKE 21 HD has been utilized in a wide range of flooding-related studies worldwide including:

    •   Flood studies
    •   Floodplain management studies
    •   Flood protection  studies, especially where a detailed description of the  impact on flood flow patterns is
        required
    •   Dam break studies
    •   Urban flooding

Some of today's flood modeling  systems offers a combination of a one-dimensional river hydraulics model and a
two-dimensional surface water model. Combining such models provides a highly efficient modeling framework as
benefits of both models can be applied where most appropriate. The modeler can apply detailed modeling and obtain
accuracy where needed without sacrificing computational or model construction time.

MIKE FLOOD  is a dynamically linked  one-dimensional and two-dimensional flood-modeling package.  The new
tool is assembled from components taken from two of the most widely applied flood modeling packages - MIKE 11
and MIKE 21. MIKE FLOOD is FEMA-approved.

MIKE FLOOD  provides a seamless  coupling  between  river and  floodplain,  between the sea and inland
waterways^ays/lagoons.  Long river reaches may be  dynamically linked to the adjacent floodplain,  enabling
accurate representation of complex lateral flood  plain flooding and drainage.  MIKE FLOOD offers extensive
capabilities for accurately representing dams, levees, bridges, road crossings, culverts, and operational structures.
GIS is used to process input data and for flood plain mapping.


Model Evaluation

A search of the Internet and recent publications did not yield any information for the MIKE 21 model evaluation.


Model Inputs
    •   Basic model parameters
            o   Model grid size and extent
            o   Timestep and length of simulation
            o   Type of output required and its frequency
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                                                                        Appendix A: Model Fact Sheets
    •   River channel and floodplain topography
    •   Calibration factors
            o   Bed resistance coefficients
            o   Momentum dispersion coefficients
            o   Wind friction factor (optional)
    •   Boundary conditions
            o   Water levels or flow magnitudes
            o   Flow direction

MIKE 21 HD utilizes the powerful and flexible MIKE Zero graphical interface for the input and pre- and post-
processing of data.


Users' Guide
MIKE 21 HD is supported by thorough online-help system and user manual and technical reference documentation.

In addition, DHI offers a comprehensive system of technical support through its dedicated Software Support Center.
24-hour assistance from DHI's technical staff can be obtained through the Software Support Center via telephone
hotline, fax, or the Internet. As a part of License Service Agreements, DHI software users are updated regularly with
software developments via newsletters and Internet broadcasts.


Technical  Hardware/Software Requirements

Computer hardware:
    •   128 Mb DRAM
    •   1 Gb hard drive space
    •   Pentium 200 Mhz minimum


Operating system:
    •   MS  Windows 98/2000/NT/XP


Programming language:
    •   None


Runtime estimates:
    •   Depends on CPU


Linkages Supported
Other MIKE models by DHI.


Related Systems
DHI series of MIKE models, built on the MIKE Zero interface.


Sensitivity/Uncertainty/Calibration

Parameter Estimation/Model Calibration
MIKE 21 HD has three calibration parameters,  namely bed resistance factor,  momentum dispersion  (eddy)
coefficient, and wind  friction factor (optional).  Calibration of the model can be achieved easily by adjustment of
these factors. In practice, the calibration of a model depends  more on the accuracy  of the available data (e.g.,
topography and boundary time series definition) than the model parameters.  Model calibration  parameters  are
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                                                                             Appendix A: Model Fact Sheets
chosen by the user. Instruction and guidelines for parameter selection are provided in the model documentation and
online help. Further information on parameter selection is available from a wide choice of published references and
case studies.


Model Testing and Verification
MIKE 21 HD has been extensively tested on a wide range of coastal and flood projects worldwide and has a proven
record of accomplishment within the wider consulting community. A list of applications and case studies is available
on the DHI web site or by contacting DHI directly.


Model Sensitivity
The sensitivity of MIKE  21 HD to calibration parameters is largely  case-dependent (e.g., in areas where the
floodplain topography is uniform and the flood slope gentle, little sensitivity to parameters is observed). However,
on floodplains with rapidly varying topographies or steep floodwater slopes, model outputs may be more sensitive to
the parameter values chosen.


Model Reliability
MIKE 21 HD has a reliability proven over many years on numerous projects worldwide. When properly calibrated,
MIKE 21 HD can predict  flood levels to within 0.05m and flood flows and velocities to  within  10 percent of
observed data.


Model Interface Capabilities
MIKE 21 is  operated through an efficient Windows-based interactive Graphical User Interface including both
graphical and tabular editing of data. The use of generic editors makes learning easy and efficient. Hence, the time
from learning to production is short.

The advanced graphical facilities enable visual data checking and presentation of the information stored in data files
and time series databases. The same graphical  environment is used for data control,  analysis, and presentation of
results.  The  graphical presentation includes  river network plan plots,  cross-sectional plots, preselection of
longitudinal profiles,  time  series  plots,  comparison of measured/simulated and simulated/simulated time series,
animation of flows and water levels on both plans and profiles, control of plotting parameters, etc.


References
DHI Software. 2004. Coastal and Inland Waters in 2D. http://www.dhisoftware.com/MIKE21/
                                                   271

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                                                                         Appendix A: Model Fact Sheets
                                          MIKE SHE


Contact Information
Peter De Golian
Danish Hyrdrologic Institute, Inc. (DHI)
311 S. Brevard Avenue
Tampa, FL 33606
(813)254-9427
pcg(@,dhigroup.com
www.dhigroup.com
Demo versions available online only.


Download Information
Availability: Proprietary
Cost (if applicable): $3000


Model Overview/Abstract
The MIKE SHE code is a powerful, physically  based, distributed parameter, fully integrated code for three-
dimensional simulation of hydrologic systems. It has been successfully applied at multiple scales, using spatially
distributed and continuous climate data to simulate a broad range of integrated hydrologic, hydraulic, and transport
problems in humid as well as in more arid areas. (See http://tvphoon.mines.edu/software/igwmcsoft/mikeshe.htm.)


Model Features
MIKE SHE can be used for the analysis, planning,  and  management of a wide range of water resources and
environmental problems related to surface water and groundwater, such as
    •    Surface water impact from groundwater withdrawal
    •    Conjunctive use of groundwater and surface water
    •    Wetland management and restoration
    •    River basin management and planning
    •    Environmental impact assessments
    •    Aquifer vulnerability mapping with dynamic recharge and surface water boundaries
    •    Groundwater management
    •    Floodplain studies
    •    Impact studies for changes in land use and climate
    •    Impact studies of agricultural practices including irrigation, drainage, and nutrient and pesticide
        management with DAISY


Model Areas Supported
Watershed              Medium
Receiving Water         High
Ecological              Low
Air                    None
Groundwater            High
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                                                                             Appendix A: Model Fact Sheets
Model Capabilities

Conceptual Basis
    •   Can simulate all the major processes in the land phase of the hydrologic cycle
    •   Is applicable on spatial scales ranging from single soil profiles (for infiltration studies) to regional
        watershed studies
    •   Includes both simple and advanced process descriptions to maximize computational efficiency
    •   Has a flexible modular structure that allows users to include only the necessary processes
    •   Easily links regional and local scale models
    •   Can be linked to ESRFs Arc View for advanced GIS applications
    •   Includes alternate process descriptions for different applications
    •   Links to original data rather than importing the data
    •   Allows you to update your original data, and your model is automatically updated
    •   Includes a dynamic data tree that gives you a precise overview of all your data
    •   Has automatic data and model verification routines
    •   Includes sophisticated output tools, including animations
    •   Manipulating time varying data
    •   Model calibration
    •   Water and mass balance analysis


Scientific Detail
The MIKE  SHE code  couples  several  partial  differential equations that describe  flow in the saturated  and
unsaturated zones with overland and channel flow. Different numerical solution schemes are then used to solve the
different partial differential equations for each process. A solution to the system of equations associated with each
process is found iteratively by use of different numerical solvers.


Model Framework
Internally coupled groundwater and surface water model.


Scale

Spatial Scale
    •   Grid-based model.


Temporal Scale
    •   User-defined, variable timestep.


Assumptions
Several assumptions are  associated  with use  of the  specific  partial  differential  equations. The significant
assumptions that have direct implications to the application of the MIKE SHE code to  the RFETS  SWWB model
include the following.


Unsaturated Zone
The main assumption is that flow is one-dimensional and vertical. In some cases,  for example, beneath ephemeral
streams, or near buildings/paved areas, or below trenches, flow in the unsaturated zone may actually have local areas
where flow is horizontal, causing this vertical-flow assumption to be violated. However, it is currently believed that
these local areas will not significantly affect the interpretation of site-wide conditions.

Other Unsaturated Zone processes not simulated in MIKE SHE Zone include the following:
    •   Hysteresis
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                                                                           Appendix A: Model Fact Sheets
    •   Air entrapment
    •   Vapor transport
    •   Freezing and thawing of soils

Although, locally these processes exert strong influences on unsaturated zone flow, their effects will likely be much
less pronounced on the site-wide model dynamics and mass balance than other factors (e.g., precipitation intensity
and distribution, saturated hydraulic conductivities, and hydrostratigraphic structure).


Saturated Zone
Properties are uniform within a single grid cell.  In reality,  porous media properties likely vary by  orders of
magnitude within each grid cell. On average, however, these local scale variations are not expected to control the
site-wide flow dynamics or  mass balance, and it  is  reasonable  to  assume that  properties can be  averaged.
Comparisons of model simulations with observed sitewide data  will help to confirm this assumption.


Overland Flow
The kinematic wave approximation is  used in MIKE SHE to simulate overland flow.  This  simplification to the full
Saint Venant  flow  equations  does  not  permit detailed simulation of backwater  effects;  however,  given the
anticipated grid resolution of the sitewide model, the assumption is reasonable.  Specific hydrologic processes, such
as rill-flow, are not considered in this code, but at the scale considered for application these processes are  not likely
to be strong controls of flow.
See http://www.dhisoftware.com/mikeshe/Reviews/External Evaluations/RFETS 2-20-01 .PDF.


Model Strengths
Some of the strengths for the MIKE SHE model include
    •   MIKE SHE has  an interface to  GIS allowing for preparation of model input and presentation  of model
        output in a GIS environment
    •   Easily links up to other MIKE models


Model Limitations
Some of the limitations for the MIKE SHE model include
    •   Need to  purchase multiple modules to take full advantage of the system
    •   Significant data needed to setup


Application History
The model has limited verification. See http://www.dhisoftware.com/mikeshe/Reviews/ for more information.


Model Evaluation
See http://www.dhisoftware.com/mikeshe/Reviews/index.htm.


Model Inputs
MIKE SHE includes all of the processes in the land phase of the hydrologic cycle:
    •   Precipitation (rain or snow)
    •   Evapotranspiration, including canopy interception
    •   Overland sheet flow
    •   Channel flow
    •   Unsaturated sub-surface flow
    •   Saturated groundwater flow
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                                                                        Appendix A: Model Fact Sheets
Within each of these, MIKE SHE offers several different approaches ranging from simple, lumped, and conceptual
approaches to advanced, distributed, and physically based approaches. Simple and advanced approaches may be
combined, which leads to an unparalleled flexibility that truly enables you to tailor the model to the hydrological
problem rather than the opposite. Changing from a simple to a more advanced approach, or vice versa, is seamless
and utilizes, to the extent possible, the existing data.
See http://www.sfwmd.gov/org/exo/cwmp/mikeshe/fmalreport.html# Toc455045031.


Users' Guide
Available online: http://www.dhisoftware.com


Technical Hardware/Software Requirements

Computer hardware:
    •   128 Mb DRAM
    •   1 Gb hard drive  space
    •   Pentium 200 Mhz minimum


Operating system:
    •   MS Windows 98/2000/NT/XP


Programming language:
    •   None


Runtime estimates:
    •   Depends on CPU


Linkages Supported
Other MIKE models by DHL


Related Systems
DHI series of MIKE models, built on the MIKE Zero interface.


Sensitivity/Uncertainty/Calibration
Built in Auto Calibration tool (http://www.dhisoftware.com/Generic tools/index.htmX


Model Interface Capabilities

    •   Dynamic navigation tree - gives you a complete overview of your model while hiding irrelevant items
    •   Logical, dynamic dialogs - allows you to concentrate on the required data, because subdialogs contain
        only relevant parameters
    •   Top-down/Left-right model design - leads you through the model development in a natural manner
    •   Automatic data checking - saves you time trying to decipher obscure run-time errors
    •   Online  documentation - Comprehensive, context sensitive online  documentation allows you to  find
        answers quickly

The MIKE SHE user interface has been designed to make it easy for you to move from your conceptual model to
your results and back again.
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                                                                           Appendix A: Model Fact Sheets
    •   Stores the link to  your original data  - not the original data itself, which gives you unprecedented
        flexibility, for example, you can
            o   Run multiple models from the same dataset
            o   Update your data and update all your models automatically
            o   Run rapid sensitivity analyses on your model domain, grid spacing, layer specifications, etc.
            o   Use your favorite editor for managing your data
    •   GIS integration - the seamless link to Arc View shape files for all distributed parameters and overlays
        saves you time and effort
    •   Geo-objects for natural, object-oriented model design -  input your natural  geologic formations
        (including lenses!) and let MIKE SHE take care of the conversion to the numerical grid
    •   Link models together - easily  link local-scale models to regional-scale models  or multiple regional
        models together to include interactions between watersheds

See http://www.dhisoftware.com/mikeshe/Interface/index.htm.


References
DHI Software. Mike SHE External Reviews. http://www.dhisoftware.com/mikeshe/Reviews/index.htm
                                                  276

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                                                                       Appendix A: Model Fact Sheets
       MINTEQA2: Metal Speciation Equilibrium Model for Surface and
                                        Groundwater


Contact Information
U.S. Environmental Protection Agency
Office of Research and Development
National Exposure Research Laboratory
Center for Environmental Assessment Modeling
(706) 355-8400
ceam(g),epamail.epa. gov
http://www.epa.gov/ceampubl/mmedia/minteq/index.htm


Download Information
Availability: Nonproprietary
Cost: N/A


Model Overview/Abstract
MINTEQA2, a geochemical equilibrium speciation model for dilute aqueous systems, is an update of MINTEQ,
which was developed by combining the fundamental mathematical structure of MINEQL with the thermodynamic
data base of WATEQ3. MINTEQA2 is an equilibrium speciation model that can be used to calculate the equilibrium
composition of dilute aqueous solutions in the laboratory or in natural aqueous systems. The  model is useful for
calculating the equilibrium mass distribution among dissolved species, adsorbed  species, and multiple solid phases
under a variety of conditions, including a gas phase with constant partial pressures. A comprehensive database is
included that  is adequate for solving a broad  range of problems without need  for additional  user-supplied
equilibrium constants. The model employs a predefined set of components that includes free ions, such as Na+, and
neutral and charged complexes (e.g., H4SiO4, Cr(OH)2+). The database of reactions is written in terms of these
components as reactants. An ancillary program, PRODEFA2, serves as an interactive preprocessor to help produce
the required MINTEQA2 input files.


Model Features
    •    The equilibrium mass distribution among dissolved species, adsorbed species, and multiple solid phases
        under a variety of conditions, including a gas phase with constant partial pressures


Model Areas Supported
Watershed              None
Receiving Water         High for metals chemistry
Ecological              None
Air                    None
Groundwater            None


Model Capabilities

Conceptual Basis
MINTEQA2 calculates the equilibrium  composition of dilute aqueous solutions  in the laboratory or in natural
aqueous systems.
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                                                                           Appendix A: Model Fact Sheets
Scientific Detail
To solve the chemical equilibrium problem, MINTEQA2 uses an initial guess for the activity of each component to
calculate the concentration of each species according to mass action expressions written in terms of component
activities. The total mass of each component is then calculated from the concentrations of every species containing
that component. The calculated total mass for each component is then compared with the known input total mass for
each component. If the calculated total mass and the known input total mass for any component differ by more than
a pre-set tolerance level, a new  estimate of the component activity is made, and the  entire procedure is repeated
(Newton-Raphson  approximation method).  After  equilibrating the aqueous phase,  MINTEQA2  computes the
saturation index (SI) for each possible solid with respect to  the solution. The solid with the  most positive  SI is
allowed to  precipitate by depleting the  dissolved concentrations  of those components comprising the solid in
accordance with the known stoichiometry of each component.  The reverse process occurs if  an existing solid is
found to be undersaturated with  respect to the solution.  In either case, it is necessary to re-equilibrate the solution
after mass has been added to or depleted from the aqueous phase. Thus, the aqueous solution is re-equilibrated just
as before except with one less degree of freedom, if precipitation has occurred,  or one more, if dissolution has
occurred. The entire computational  loop of iterating to  equilibrium, checking for precipitation or dissolution, and
shifting mass from the aqueous to the solid phase or vice versa is repeated until equilibrium is achieved and there are
no oversaturated possible solids and no undersaturated existing solids. The model calculates simultaneous solutions
of nonlinear mass action expressions and linear mass balance relationships.


Model Framework
    •   Dilute aqueous solutions in the laboratory or in natural aqueous systems


Scale

Spatial Scale
None


Temporal Scale
None


Assumptions
    •   Chemical reactions are based on equilibrium concept


Model Strengths
    •   Capable of simulating  detailed  chemical  speciation simulations, including  dissolved species, adsorbed
        species, and multiple solid phases under a variety of conditions


Model Limitations
    •   Does not include time series calculation capability


Application History
MINTEQA2 has been used for numerous  applications to groundwater and surface  water by USGS, EPA, and
academic institutions.


Model Evaluation
The model  has  been internally peer reviewed by EPA  Science Advisory Board (SAB) and ERD-Athens internal
review panels. Model has been externally peer reviewed via publications in the technical literature.
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                                                                      Appendix A: Model Fact Sheets
Model Inputs
    •  Total concentrations


Users' Guide
Available online: http://www.epa.gov/ceampubl/mmedia/minteq/index.htm


Technical Hardware/Software Requirements

Computer hardware:
    •  PC


Operating system:
    •  PC-DOS


Programming language:
    •  FORTRAN


Runtime estimates:
    •  Seconds


Linkages Supported
None


Related Systems
PHREEQ


Sensitivity/Uncertainty/Calibration
Not available


Model Interface Capabilities
Not available


References
Benjamin, M.M. and J.O. Leckie.  1981. Multiple-Site Adsorption of Cd, Cu, Zn, and Pb on Amorphous Iron
Oxyhydroxide. J. Coll. Inter. Sci. 79:209-221.

Davies, C.W. 1962. Ion Association. Butterworths Pub., Washington, DC.

Davis, J.A., R.O. James and J.O. Leckie. 1978. Surface lonization and Complexation at the Oxide/Water Interface: I.
Computation of Electrical Double Layer Properties in Simple Electrolytes. J. Coll. Inter. Sci. 63:480-499.

Davis, J.A. and J.O. Leckie.  1978. Surface lonization and Complexation at the Oxide/Water Interface: II. Surface
Properties of Amorphous Iron Oxyhydroxide and Adsorption of Metal Ions. J. Coll. Inter. Sci. 67:90-107.

Dzombak, D. A. 1986. Toward a Uniform Model for the Sorption of Inorganic Ions on Hydrous Oxides. Ph.D. diss.,
Massachusetts Institute of Technology, Cambridge Massachusetts.
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                                                                        Appendix A: Model Fact Sheets
Felmy, A.R.,  D.C.  Girvin, and E.A. Jenne.  1984. MINTEQ—A Computer  Program for Calculating Aqueous
Geochemical Equilibria. EPA-600/3-84-O32. U.S. Environmental Protection Agency, Athens, GA..
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                                                                       Appendix A: Model Fact Sheets
    MUSIC: Model for Urban Stormwater Improvement Conceptualization


Contact Information
Cooperative Research Center for Catchment Hydrology
Centre Office
CRC for Catchment Hydrology
Department of Civil Engineering
Building 60
Monash University, VIC 3800
crcch(@,eng. monash.edu. au
(03) 9905 2704
http ://www. toolkit, net, au/music
Download Information
Availability: Proprietary
Cost: $330 for new user


Model Overview/Abstract
The Model for Urban Stormwater Improvement Conceptualization (MUSIC) was developed by the Cooperative
Research Center (CRC) for Catchment Hydrology in Australia. MUSIC is designed to simulate urban Stormwater
systems operating at a range of temporal and spatial scales: catchments from 0.01 km2 to 100 km2 and modeling
timesteps  ranging from 6 minutes to 24 hours to match the catchment's scale. MUSIC provides  a user-friendly
interface, to allow complex Stormwater management scenarios to be quickly and efficiently created, and the results
to be viewed using a range of graphical and tabular formats. The Stormwater control devices that can be simulated in
MUSIC include ponds, bioretention, infiltration buffer strips, sedimentation basins, pollutant traps, wetlands, and
swales. Major algorithms applied in BMP simulation are Continuously Stirred Tank Reactors (CSTRs) in series
model and first-order decay (k-C* model).


Model Features
    •   Urban Stormwater treatment conceptual design tool


Model Areas Supported
Watershed              Medium (urban)
Receiving Water         Low
Ecological              None
Air                    None
Groundwater            Low


Model Capabilities

Conceptual Basis
The algorithm adopted to generate urban runoff is based on a simplified mass balance model that was developed by
Chiew  et al. (1997). For simulation of BMPs, the Plus Method for reservoir routing is used  to simulate the
movement of water through the treatment system, and a first-order kinetic model combined with the Continuously
Stirred Tank Reactors (CSTRs) model to simulate the removal of pollutants within the treatment system.
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                                                                            Appendix A: Model Fact Sheets
Scientific Detail
The simplified rainfall-runoff model (Chiew et al., 1997) is a mass balance model, which involves potential ET,
impervious storage, soil moisture storage, and a groundwater component.

For stormwater treatment process simulation, assume that the pollutant removal is a first-order decay process toward
an  equilibrium value. This behavior is described by  the first-order kinetic (k-C*)  model,  in which C* is the
background concentration, and k is the decay rate constant. In addition, the number of CSTRs is used to reflect the
shape factor on pollutant  removal effectiveness. The concentration attenuation simulated by the  k-C* model is
computed separately at each timestep for each CSTR.


Model Framework
A catchment (the entire catchment being simulated) is made up of a number of nodes, joined together by drainage
links. The catchment may contain a number of subcatchments, which are called source nodes. Three types of source
nodes represent  three default land uses: urban,  agricultural and forested, these source  nodes differ  only in their
default baseflow and stormflow pollutant concentrations. Users therefore can create source nodes to  simulate any
type of land use (e.g. road runoff), using their own water quality data. A catchment contains only one receiving
node, which represents the receiving waterway  (e.g. River, lake, bay). A catchment may also have  a  number of
junction nodes, which simply act  as confluences. They have no effect on flow or water quality; they simply join
multiple upstream nodes into one. Treatment nodes are used to represent stormwater treatment measures.


Scale

Spatial Scale
    •   Catchment, 0.01 km2 to 100 km2


Temporal Scale
    •   6 minutes to 24 hours


Assumptions
    •   Physical process (sedimentation) is the predominant pollutant removal mechanism during the event and is
        described by the order kinetics (k-C*) model
    •   Constant seepage  rate for infiltration processes


Model Strengths
    •   Includes an intuitive and user-friendly interface
    •   Capable of simulating various type of BMPs
    •   Suitable for evaluation of urban stormwater treatment conceptual design


Model Limitations
    •   The first-order kinetics (k-C*) modeling approach adopted in the USTM strictly applies only during event
        operation. The parameter  k lumps together the  influence of a number of predominantly physical factors on
        the removal of stormwater pollutants. While the assumption of  a predominance  of physical  removal
        processes during storm event operation is reasonable for paniculate  (inorganic) contaminants, other factors
        associated with chemical  and biological processes can also be significant. These factors are  currently not
        accounted for in the determination of k. The background concentration C* is assumed to be  a  constant at
        present and therefore does not reflect the influence of hydraulic loading, flow velocity, and other factors on
        water quality of stormwater runoff.
    •   The treatment device infiltration process is simulated by applying a constant seepage rate.
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                                                                       Appendix A: Model Fact Sheets
    •   Default empirical parameters values provided in the model were derived from monitoring data collected in
        Australia, and it is strongly recommended that the model be calibrated before it is applied.


Application History
The model has been applied mainly in Australia.


Model Evaluation
Not available


Model Inputs
    •   Climate data (MUSIC comes with Bureau of Meteorology-formatted climate files for 30 reference cities
        widely distributed throughout Australia.)
    •   Catchment characteristics (area, land use, impervious area, etc)
    •   Conceptual designs of stormwater treatment measures (type, size, etc)


Users' Guide
Available online: http://www.toolkit.net.au/music
Technical Hardware/Software Requirements
Computer hardware:
    •   Intel-based PC with CD-ROM drive
    •   Pentium III 750Mhz (preferably IGHz)
    •   256Mb RAM (preferably 512 Mb)
    •   5Gb of free hard drive space (preferably 10Gb)
    •   Monitor capable of 800 x 600 pixels (preferably 1024 x 768) @ 8-bit (256) colors (preferably 16-bit)


Operating system:
    •   Microsoft Windows 2000/XP


Programming language:
    •   Unknown


Runtime estimates:
    •   Minutes to hours


Linkages Supported
None


Related Systems
None


Sensitivity/Uncertainty/Calibration
Displays the observed value with modeled time series to facilitate calibration process.
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                                                                           Appendix A: Model Fact Sheets
Model Interface Capabilities
    •   Graphical user interface for node/link network construction and data input, viewing, and editing
    •   Post-processor displays time series graphs, tables of statistics, cumulative frequency graphs, and file export


References
Chiew, F.H.S. & McMahon, T. A. 1997. Modelling Daily Runoff  and Pollutant Load from Urban  Catchments.
Water - Journal of the Australian Water Association. 24:16-17.

Wong, T. H.  F., Duncan, H. P., Fletcher, T. D., Jenkins, G. A., & Coleman, J. R. 2001. A unified  approach to
modelling urban stormwater treatment.  Paper presented at the Second South Pacific Stormwater Conference, June
27-29, 2001, Auckland, New Zealand.

Wong, T.H.F. 2000. Improving Urban Stormwater Quality - From Theory to Implementation. Water  - Journal of
the Australian Water Association. 27(6):28-31.
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                                                                      Appendix A: Model Fact Sheets
   P8-UCM: Program for Predicting Polluting Particle Passage through Pits,
                   Puddles, and Ponds—Urban Catchment Model


Contact Information
William Walker, Jr.,
Environmental Engineer
1127 Lowell Road
Concord, Massachusetts 01742-5522
(978) 369-8061
wwwalker(g),wwwalker. net
http ://www. wwwalker.net


Download Information
Availability: Nonproprietary
http ://wwwalker. net/p8/
Cost: N/A


Model Overview/Abstract
P8 is a model for predicting the generation and transport of stormwater pollutants in urban watersheds. Continuous
water balance  and  mass  balance calculations  are performed on a user-defined  system consisting of watersheds,
devices (runoff storage/treatment areas,  BMPs), particle classes, and water quality components. Simulations are
driven by continuous hourly rainfall and daily air temperature time series data. The model simulates pollutant
transport and removal in a variety of treatment devices (BMPs), including swales, buffer strips, detention ponds
(dry, wet, and extended), flow splitters, and infiltration basins (offline and online), pipes, and aquifers. Water quality
components include total  suspended solids (TSS) (five size fractions), total phosphorus (TP), total Kjeldahl nitrogen
(TKN), copper, lead, zinc, and hydrocarbons.


Model Features
    •  Urban watershed hydrology
    •  Urban pollutants
    •  Stormwater BMPs


Model Areas Supported
Watershed             Medium
Receiving Water        Low
Ecological             None
Air                   None
Groundwater           Low


Model Capabilities

Conceptual Basis
In P8-UCM, continuous  water balance  and mass balance calculations  are performed on a user-defined system
consisting  of  watersheds  (pervious   and  impervious  areas  are separately  considered),   devices  (runoff
storage/treatment areas, BMPs), particle classes, and water quality components.
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                                                                           Appendix A: Model Fact Sheets
Scientific Detail
Runoff from pervious areas is computed using the Soil Conservation Service's (SCS) curve number technique.
Antecedent moisture conditions are adjusted, based on 5-day antecedent precipitation and season. Percolation from
pervious  areas  is  estimated  by  water balance  at the  surface  (percolation  =  precipitation  -  runoff  -
evapotranspiration). Evapotranspiration is computed from air temperature and season  using Hamon's method.
Runoff from impervious areas starts after the cumulative storm rainfall  exceeds the specified depression storage.
Both rainfall and snowmelt are considered in runoff estimations. Particle concentrations in runoff from pervious
areas are  computed using a method similar to the sediment rating curve included in EPA's Stormwater Management
Model (SWMM). Particle loads from impervious  areas are computed using either or both of two techniques: (1)
particle accumulation and washoff and/or (2) fixed runoff concentration. The first method is used in default particle
datasets.  An exponential washoff relationship similar to that employed in SWMM  is used to  simulate particle
buildup and washoff from impervious surfaces.

Receiving water processes  are limited to devices, ponds, infiltration basins, and shallow channels. Storage area or
volume and outflow relations represent flow in ponds. Shallow channel flow is estimated by Manning equation.
Settling and transport of sediments are simulated in the model.


Model Framework
    •   Watershed model
    •   Shallow channels,  ponds, infiltration basins, and storage devices


Scale

Spatial Scale
    •   Subwatersheds


Temporal  Scale
    •   Hourly


Assumptions
    •   A watershed is divided into a lumped pervious area and a lumped impervious area.
    •   SCS Curve Number approach is appropriate for estimating surface runoff.
    •   All the pollutants entering the waterbodies are sediment-adsorbed.


Model Strengths
    •   A simple model that requires moderate effort to setup, calibrate, and validate
    •   Simulates urban stormwater BMPs and wetlands


Model Limitations
    •   SCS Curve Number approach at hourly timestep requires substantial calibration
    •   Limited capability in flow and pollutant routing
    •   Limited capability in groundwater process and groundwater and surface water interaction


Application History
P8 is widely applied in the Northeast and Midwest regions of the United States, especially to size stormwater BMPs
in urban watersheds.
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                                                                       Appendix A: Model Fact Sheets
Model Evaluation
P8 documentation presents model evaluation in various applications.


Model Inputs
    •   Climate data: hourly precipitation and daily air temperature
    •   Device (hydraulic) parameters for pond, basin, buffer, pipe, splitter, and aquifer
    •   Watershed parameters: areas, impervious fraction and depression storage, street-sweeping frequency, SCS
        runoff curve number for pervious portion
    •   Particle parameters: accumulation/washoff parameters, runoff concentrations, street-sweeper efficiencies,
        settling velocities, decay rates, filtration efficiencies
    •   Water quality component parameters: pollutant concentrations


Users' Guide
Available online: http://www.wwwalker.net/p8/p8vldoc.pdf


Technical Hardware/Software Requirements

Computer hardware:
    •   PC


Operating system:
    •   PC-DOS


Programming language:
    •   FORTRAN


Runtime estimates:
    •   Minutes to less than an hour


Linkages Supported
None


Related Systems
None


Sensitivity/Uncertainty/Calibration
Built in capability for calibration and sensitivity analysis


Model Interface Capabilities
    •   DOS User Interface
    •   P8CONV - a preprocessor to develop precipitation input file


References
Palmstrom, N. & W. Walker. 1990. The P8 Urban Catchment Model for Evaluating Nonpoint Source Controls at
the Local Level,  Enhancing States'  Lake Management  Programs.  U.S.  Environmental  Protection  Agency,
Washington, DC.
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                                                                        Appendix A: Model Fact Sheets
U.S. Environmental  Protection Agency (USEPA). 1992.  Compendium of Watershed-Scale Models for TMDL
Development. EPA841-R-92-002. U.S. Environmental Protection Agency, Office of Water, Washington, DC.

HDR Inc. 1992. Evaluation of Storm Water Computer Models. Prepared for City of Minneapolis by HDR Inc.

U.S. Environmental Protection Agency (USEPA).  1997. Compendium of Tools for Watershed Assessment & TMDL
Development. EPA841-B-97-006. U.S. Environmental Protection Agency, Office of Water, Washington, DC.

Walker, W. 1990. P8 Urban Catchment Model Program Documentation  Version 1.1. (Computer program). IEP,
Inc., Northboroug, MA and Narragansett Bay Project, Providence, RI.
                                                288

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                                                                       Appendix A: Model Fact Sheets
                    PCSWMM:  Storm Water Management Model


Contact Information
Computational Hydraulics Int. (CHI)
3909WitmerRoad#960
Niagara Falls, NY 14305-1244
1-800-891-8447
infotgicomputationalhydraulics.com
http://www.computationalhydraulics.com/


Download Information
Availability: Proprietary
http://www.computationalhydraulics.com/Software/PCSWMM/index.html
Cost: $599.95


Model Overview/Abstract
PCSWMM 2003 has a menu-driven interface for running the EPA's Stormwater Management Model (SWMM) and
providing hydro/pollutographs and animated hydraulic gradelines. It is suitable for projects ranging from small BMP
installations to continuous hydrology, hydraulics and quality simulation of major and minor drainage systems. It also
provides GIS links to the EPA's SWMM core processes.

PCSWMM 2003 is flexible to be used with any of the following versions of the  SWMM engine: WMM4.4h,
SWMM4.3 and later SWMM4.31, 4.40  and 4.4gu releases. PCSWMM fully supports all modules of SWMM,
including the Rain, Temperature, Runoff, Transport, Extran, Storage/Treatment, Combine, and Statistics modules.


Model Features
    •   Watershed hydrology and water quality
    •   Stream transport
    •   Urban stormwater systems and pipes


Model Areas Supported
Watershed              High
Receiving Water         Medium
Ecological              None
Air                    None
Groundwater            Low


Model Capabilities

Conceptual Basis
The basic spatial unit for SWMM is the  subcatchment, into which the modeled watershed is subdivided. Several
small subwatersheds and representative streams may be networked together to represent a larger watershed drainage
area. The SWMM-RUNOFF and SWMM-TRANSPORT modules can be used to simulate various processes, both
on land and in-stream.
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                                                                            Appendix A: Model Fact Sheets
Scientific Detail
Infiltration is calculated using the Horton or Green-Ampt methods,  at the user's choice. A version of Manning's
equation is used to estimate flow rate from the subcatchment area based on a conceptual model of the subcatchment
as a  "nonlinear reservoir."  The  lumped storage scheme is  applied for soil  and groundwater  modeling.  For
impervious areas, a linear formulation is used to compute daily and hourly increases in particle accumulation. For
pervious areas, a modified Universal Soil Loss Equation (USLE) determines sediment load. The concept of potency
factors is applied to simulate pollutants other than sediment.

Transport block has kinematic wave routing of flow and quality, base flow generation, and infiltration capabilities,
and it routes flow through user-defined system ranges from natural channel to concrete pipes. The EXTRAN block
carries out a numerical solution of the complete St. Venant equations for the urban drainageways and conduits, by
modeling the network as a link-node system (cf, DYNHYD). SWMM can directly be interfaced with EPA's WASP
receiving water quality model.


Model Framework
    •   Subwatersheds and watershed
    •   One-dimensional mass balance flow and pollutant routing


Scale

Spatial Scale
    •   Subwatershed. Flexible size
    •   One-dimensional channel/pipe system


Temporal Scale
    •   User-defined timestep, typically hourly


Assumptions
    •   The model performs best in urbanized areas with impervious drainage,  although it has been widely used
        elsewhere.
    •   Model parameters for quantity and quality simulations are developed such that the model will be calibrated
        to enhance its capability.
    •   Water table elevation is assumed to be fixed value.
    •   All the pollutants entering the waterbodies are sediment-adsorbed.


Model Strengths
    •   Unlimited model size
    •   Flexible input file editor
    •   Easy to setup SWMM runs
    •   Hot-swapping SWMM engines
    •   User friendly
    •   Sensitivity, calibration, and error analysis tools
    •   Full support  of all SWMM modules and procedures


Model Limitations
    •   Not a public domain product
    •   Lack of subsurface quality routing
    •   No interaction of quality processes
    •   Limited kinetics (a first-order decay rate can be specified for each pollutant in the Transport Block)
    •   Difficulty in simulation of wetlands quality processes
                                                  290

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                                                                          Appendix A: Model Fact Sheets
    •   Rudimentary scour-deposition routine in the Transport Block


Application History
SWMM is applied to urban hydrologic quantity and quality problems in scores of U.S. cities as well as extensively
in Canada, Europe, and Australia. The model has been used for very complex hydraulic analysis of combined sewer
overflow mitigation, as well as for many stormwater management planning studies and pollution abatement projects,
and there are many instances of successful calibration and verification (Huber, 1992). Warwick and Tadepalli (1991)
describe  calibration and verification of SWMM on a  10-square-mile  urbanized  watershed  in Dallas,  Texas.
Tsihrintzis et al. (1995) describe SWMM applications to  four watersheds in South Florida representing high- and
low-density residential, commercial, and highway land uses.


Model Evaluation
It is widely applied  in Florida, but the applications are limited primarily to urban areas,  stormwater studies, and
event based applications.


Model Inputs
    •   Data requirements  for hydrologic simulation include area,  imperviousness,  slope,  roughness,  width,
        depression storage, and infiltration parameters. Land use data are used to determine ground cover type for
        each model subarea.
    •   Depending on the options set for the loading calculations, additional parameters are necessary (e.g., buildup
        coefficients would be needed for the dry weather buildup simulation).
    •   Additional data are necessary if the user intends to model subsurface drainage and interflow.
    •   Depending on the stormwater system, dimensions,  slope, roughness coefficients,  elevations, storage, etc.,
        are required.
    •   Continuous records of evapotranspiration, temperature,  and solar intensity


Users' Guide
Available online: http://www.computationalhvdraulics.com/Publications/Books/r219.html
Cost: $85


Technical Hardware/Software Requirements

Computer hardware:
    •   PC with 50MB available hard-drive space and preferably 256MB RAM


Operating system:
    •   Microsoft Windows


Programming language:
    •   FORTRAN (model) and Visual Basic (interface)


Runtime estimates:
    •   Minutes to less than an hour


Linkages Supported
EPA's Stormwater Management Model (SWMM)
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                                                                          Appendix A: Model Fact Sheets
Related Systems
PCSWMM provides a SWMM  environment for model  development, display  and analysis. GIS component of
PCSWMM is completely rewritten with innovative model creation and output visualization tools.


Sensitivity/Uncertainty/Calibration
The Genetic Algorithm Calibration tool is provided in PCSWMM for the complete calibration of SWMM Runoff,
Transport, Extran and/or Storage Treatment modules. It significantly reduces the effort required for calibration and
design optimization. This tool helps in model development and verification.


Model Interface Capabilities
    •   User-friendly model interface
    •   Graphical dialog boxes
    •   Data input is through wizard-style interface technology
    •   Data entry and model output in graphical form
    •   Animated hydraulic grade lines and multiple observed vs. computed plots provide visualizations of model
        results
    •   Background layer support for Arc View, AutoCAD, Maplnfo, TIFF, JPEG, and BMP


References
Donigian,  A.S., Jr., and  W.C. Huber.  1991. Modeling ofnonpoint source water quality in urban and non-urban
areas. EPA/600/3-91/039. U.S. Environmental Protection Agency,  Environmental Research Laboratory,  Athens,
GA.

Huber, W. C. 1992. Experience with the EPA SWMM Model for analysis and solution of urban drainage problems.
In Proceedings of el Inundaciones Y Redes De Drenaje Urbano, ed. J. Dolz, M. Gomez, and J. P. Martin, Colegio de
Ingenieros de Caminos, Canales Y Puertos, Universitat Politecnica de Catalunya, Barcelona,  Spain, 1992, pp. 199-
220.

Huber,  W.C. 2001.  New  options for  overland flow routing in SWMM.  ASCE-EWRI. World Water  and
Environmental Congress, Orlando, FL.

Huber, W.C., and R.E. Dickinson. 1988. Storm  Water Management Model Version 4, User's manual. EPA 600/ 3-
88/ 00la (NTIS PB88-236641/ AS). U.S. Environmental Protection Agency, Athens, GA.

Irvine, K.N., E.G. Loganathan, E.J. Pratt and H.C. Sikka. 1993. Calibration of PCSWMM to estimate metals,  PCBs
and HCB in CSOs from an industrial sewershed. In New Techniques for Modeling the Management ofStormwater
Quality Impacts, ed. W. James, Lewis Publishers, Boca Raton, FL. pp. 215-242.

James, W., Huber, W.  C., Pitt, R. E., Dickinson, R. E., and  James, R.  C. 2002.  Water  Systems Models [1]:
Hydrology,  User's guide  to SWMM4  RUNOFF and  supporting modules  and to  PCSWMM Version  2.4.
Computational Hydraulics International, Guelph, Ontario, Canada.

James, W., Huber, W. C., Pitt, R. E., Dickinson, R. E., Roesner, L. A., Aldrich, J. A., and James, R. C. 2002.  Water
Systems Models [2]: Hydraulics, User's guide to SWMM4 TRANSPORT, EXTRAN and STORAGE modules and to
PCSWM. Version 2.4. Computational Hydraulics International. Guelph, Ontario, Canada.

Tshihrintzis, V.  A., R. Hamid, and H. R. Fuentes. 1995.  Calibration and verification of watershed quality model
SWMM in  subtropical  urban areas. In Proceedings of the First International  Conference—Water Resources
Engineering, American Society of Civil Engineers, San Antonio, TX, August 14-16, 1995, pp.  373-377.

Tsihrintzis, V. and R. Hamid.  1998. Runoff  quality  prediction from small urban catchments  using SWMM.
Hydrological Processes.  12(2):311-329.
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                                                                           Appendix A: Model Fact Sheets
Warwick, J. I, and P. Tadepalli. 1991. Efficacy of SWMM application. Journal of Water Resources Planning and
Management.  117(3):352-366.
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                                                                        Appendix A: Model Fact Sheets
   PGC - BMP Module:  Prince George's County Best Management Practice
                                            Module


Contact Information
Mow-Soung Cheng
Section Head, Technical Support Section
Prince George's County Department of Environmental Resources
Programs and Planning Division
9400 Peppercorn Place,  Sixth Floor
Largo, MD 20774
(301) 883-5836
mscheng(g),co.pg.md.us


Download Information
Availability: Nonproprietary
Cost: N/A


Model Overview/Abstract
Prince George's  County, working with Tetra Tech, Inc., developed a best management practice (BMP) evaluation
module to  assist in assessing the effectiveness of low-impact development (LID) technology. This module uses
simplified  process-based algorithms to simulate  BMP control of modeled flow and water quality time  series
generated from runoff models such as the HSPF. These unit-process algorithms include weir and orifice control
structures,  storm swale  characteristics, flow  and pollutant transport, flow routing and networking, infiltration and
saturation, evapotranspiration, and a general loss/decay representation for a pollutant. The module offers the user the
flexibility to  design retention style  or open-channel BMPs, define flow routing through a BMP or BMP network,
simulate IMPs  such as reduced or discontinued imperviousness through  flow  networking, and compare BMP
controls against some defined benchmark such as a simulated pre-development condition. Because the underlying
algorithms are based on physical processes, BMP effectiveness can be evaluated and estimated over a wide range of
storm conditions, BMP designs, and flow routing configurations.  Such a tool provides a quantitative medium for
assessing and designing TMDL allocation scenarios and evaluating the effectiveness of a proposed management
approach.


Model Features
    •   Retention-style BMP simulation
    •   Open-channel BMP simulation
    •   Soil media storage, infiltration, and filtration
    •   Time series input and output simulation
    •   Linked water quality, with generalized first-order pollutant loss and filtration loss


Model Areas  Supported
Watershed             Medium
Receiving Water        Medium
Ecological             Low
Air                   None
Groundwater           Low
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                                                                            Appendix A: Model Fact Sheets
Model Capabilities

Conceptual Basis
The BMP module requires unit-area time series of runoff from different land uses, typically generated by a related
watershed model of the area. It offers the flexibility to schematically represent the site's land parcel distribution and
flow routing (from land segment to BMP or BMP to BMP). Each BMP represents an evaluation point, where the
effect of the BMP or BMP network is assessed. An analysis spreadsheet allows the user to compare the developed
condition with and without BMPs to the pre-developed condition (typically represented as an equal-area forest site).
Analysis includes long-term volume and loads, storm-by-storm hydrograph and pollutograph comparison, and multi-
storm trend analysis for peak flow, volume control, and pollutant load reduction.


Scientific Detail
An external model that is capable of generating hourly time series of flow and pollutant load is used to generate the
required runoff inputs for the BMP Module. Examples of such models include HSPF, LSPC, and SWMM. The
primary function of the BMP Module is to provide detailed simulation of processes within BMPs. The BMP Module
presents two main categories for  BMPs:  Class A, retention/detention structures,  and Class  B, open-channel
structures. Between these two categories, the actual BMP unit processes  may be combined interchangeably to
represent a wide range of BMPs. These  BMP unit processes include (or are  influenced by) evapotranspiration,
infiltration, orifice outflow,  under-drain outflow, weir-controlled overflow or spillway, BMP bottom slope, bottom
roughness, soil media filtration of pollutant using  under-drain outflow, and general first-order loss or decay of
pollutant.  Computational methods  include  standard rectangular or triangular  weir equations, orifice equations,
Manning's Equation coupled with the continuity equation, and the Holtan-Lopez infiltration model. This infiltration
model is built on the premise that infiltration is proportional to the capacity of the soil to store water, giving it an
advantage over other methods (e.g. Morton's equation, Green-Amp equation) in that it is  physically based and
describes the infiltration and recovery capacity during low-flow or dry periods (Haan et al., 1994). This equation
was developed on the premise that soil moisture storage, surface-connected porosity, and the effects of root paths are
the dominant factors influencing infiltration capacity (Maidment, 1993).


Model Framework
    •   Modeled runoff inputs are land use-specific unit-area time series
    •   One-dimensional mass balance flow and pollutant routing (land-to-BMP or BMP-to-BMP)
    •   Combinations of BMP unit process used to simulate activity within a management structure
    •   Assumes complete  mixing within BMP compartments


Scale

Spatial Scale
    •   Site-level or small watershed-scale analysis


Temporal Scale
    •   Hourly input and output time series


Assumptions
Simulated time series components  can  be spatially  distributed and scaled  by  area; however, unit characteristics
remain constant within each unique land use type. Flow routing and simulation  order are performed on a top-down
basis. Complete mixing is assumed within the surface storage volume of the BMP. Infiltrating or outflow water exits
at the current concentration of the completely mixed surface storage volume. The module assumes  one-directional
flow from land to BMP or BMP to BMP.
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                                                                          Appendix A: Model Fact Sheets
Model Strengths
The BMP Module interface allows the user to design the schematic site layout and represent flow diversions and
alterations by the placement of BMP structures. BMP scenarios such as reduced imperviousness can be represented
as a change in land use parcels. The BMP Module offers a great deal of detail in how a BMP can be physically
represented and simulates both hydrologic and generalized water quality activity within the BMP. It uses process-
based algorithms to represent BMP unit processes. The result is a time history of both influent and effluent flow and
pollutant levels on an hourly basis. A  Visual Basic Applications (VBA)-enhanced Excel analysis spreadsheet
automatically queries and summarizes model results and produces a set of BMP performance measures for analysis
between multiple scenarios.


Model Limitations
Because the model currently supports hourly time series, the model assumptions are most valid with BMPs that have
residence times of at least an hour.  Runoff characteristics  must be  predetermined within an external watershed
model; therefore, factors like land slope and its influence on influent runoff to BMPs cannot be changed from within
the BMP Module.


Application History
Conceptualization and design of the BMP Module began in late 1999 to early 2000. The Module has been under
internal testing, development, and enhancement during its relatively short recent history. Applications include both
proposed retrofit and development sites in Prince Georges County, Maryland. Examples include a commercial site
example from a Maryland state design manual, some proposed LID integrated site plans, and individual BMP types
in the LID Design Manual (Prince George's County, 1999). BMP Module application has been limited to screening-
level and planning purposes. The module  has never been used for BMP design purposes.


Model Evaluation
A validation/confirmation exercise was performed using the BMP Module and laboratory data that documented
measured performance of a set of bioretention basins  (Davis, 2001). The BMP Module  was configured and loaded
consistent with the reported data to test the module's predictive capability. The results showed good agreement
between modeled and observed BMP performance.


Model Inputs
    •   Continuous hourly runoff unit-area time series model output by land parcel type
    •   Relevant BMP design and dimensional information


Users' Guide
A guide is available from Prince George's County (Tetra Tech, 2003).


Technical Hardware/Software Requirements

Computer hardware:
    •   IBM-compatible PC


Operating system:
    •   Windows 98 or later


Programming language:
    •   Module interface: C++, Analysis Tool: Visual Basic Applications in Microsoft Excel
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                                                                          Appendix A: Model Fact Sheets
Runtime estimates:
    •   Seconds to minutes, depending on spatial/temporal resolution and computer performance


Linkages Supported
    •   Input format is closely compatible with HSPF, LSPC, or SWMM time series outputs
    •   Output format links to Excel Analysis Tool


Related Systems
The related systems listed below contain BMP simulation capability:
    •   Public domain models: SWMM, P8, VFSMOD
    •   Proprietary models: MUSIC, LIFE


Sensitivity/Uncertainty/Calibration
    •   Runoff inputs must be calibrated externally within the context of the relevant runoff generation model.
    •   BMP Module specifications include BMP size and/or geometry.
    •   Calibration parameters are associated with the infiltration method.
    •   The model  is primarily designed to represent the relative change or impact of a BMP for comparison
        between scenarios. Actual validation/confirmation of the model using data requires detailed BMP influent
        and effluent monitoring.


Model Interface Capabilities
    •   User-friendly model interface.
    •   Data input allows user to build library of predefined BMPs.
    •   Drag-and-drop interface allows users to build complex networks of land, and single or multiple BMPs in
        series.
    •   Postprocessing tools provide a graphic summary of multiple evaluation criteria.


References
Bowie G., W. Mills, D. Porcella, C. Campbell,  J. Pagenkopf, G. Rupp, K. Johnson, P. Chan, S. Gherini, C.
Chamberlin.  1985. Rates,  Constants, and Kinetics Formulations in Surface Water Quality Modeling. Ed. 2. EPA
600/3-85/040. U.S. Environmental Protection Agency, Washington, DC.

Davis, A.P., M. Shokouhian, H. Sharma, and C. Minami. 2001. Laboratory Study for Biological Retention for Urban
Stormwater Management. Water Environment Research. 73(1).

Haan, C.T., B.J.  Barfield,  and J.C.  Hayes.  1994. Design Hydrology and Sedimentology for Small Catchments.
Academic Press, San Diego, CA.

Linsley, R., J. Franzini, D. Freyberb, G. Tchobanoglous. 1992. Water-Resource Engineering. 4th Ed.. McGraw-Hill,
New York.

Maidment, D. 1993. Handbook of Hydrology. McGraw-Hill, New York.

Prince George's  County.  1999.  Low-Impact Development Design Strategies: An Integrated Design  Approach.
Department of Environmental Resources Programs and Planning Division, Largo, MD.

Tetra Tech, Inc.  2003. Low-Impact Development Management Practices Evaluation Computer Module -  User's
Guide. Prepared for Prince George's County by Tetra Tech, Inc., Fairfax, VA.
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                                                                     Appendix A: Model Fact Sheets
                 QUAL2E: Enhanced Stream Water Quality Model


Contact Information
Paul Cocca
U.S. Environmental Protection Agency
1200 Pennsylvania Avenue, N.W.
Washington, DC 20460
(202) 566-0406
cocca.paul@epa. gov


Download Information
Availability: Nonproprietary
http://www.epa.gov/docs/OUAL2E WINDOWS/
http://www.epa.gov/ceampubl/swater/index.htm
Cost: N/A


Model Overview/Abstract
The QUAL2E model simulates nutrient dynamics, algal production, and dissolved  oxygen with the  impact of
benthic and carbonaceous demand in streams. Fifteen water quality variables are modeled in QUAL2E. The model
solves the time-variable water quality variable under steady, nonuniform flow. It can be applied to steady state and
diurnal time-variable situations.


Model Features
    •   Dissolved oxygen and oxygen demand
    •   Nutrients
    •   Tracer
    •   Algal dynamics
    •   Bacteria


Model Areas Supported
Watershed             None
Receiving Water        Medium
Ecological             Medium
Air                   None
Groundwater           None


Model Capabilities

Conceptual Basis
Rivers are conceptualized as a collection of reaches. Within each reach, the hydrogeometric properties are assumed
to be same. The reaches are further divided into a series of control volumes of the same length.
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                                                                          Appendix A: Model Fact Sheets
Scientific Detail
The governing equations of QUAL2E are the advection-dispersion-reaction equations with external sources and
sinks. A flow balance is assumed, and steady, nonuniform flow is used to solve the advection. QUAL2E assumes
that the channel has a trapezoidal cross section. An empirical function is applied to obtain the dispersion coefficient.
The governing equations are solved with an implicit scheme in time and a backward difference in space.


Model Framework
    •   One-dimensional model
    •   Rivers, streams, channel network


Scale

Spatial Scale
    •   One-dimensional horizontal, nonuniform flow


Temporal Scale
    •   Steady state


Assumptions
    •   Steady, nonuniform flow
    •   Trapezoidal cross section channel
    •   Flow balance


Model Strengths
    •   A simple model with comprehensive nutrient, algal, and dissolved oxygen dynamics
    •   Easy to use, easy to understand
    •   Complete documentation
    •   Sensitivity analysis with QUAL2E-UNCAS


Model Limitations
    •   One-dimensional channel that cannot handle tidal impact
    •   Equal-length elements
    •   Steady flow (not able to model variable flow condition)
    •   Specified sediment oxygen demand (SOD); no sediment diagenesis


Application History
QUAL2E has been widely applied in the United States and around the world, including Chile, Italy, Spain, Slovenia,
India, and South Africa.


Model Evaluation
QUAL2E has been widely tested. Materials related to QUAL2E can be found in textbooks, journal papers, and
technical reports. An example is the evaluation of QUAL2E written by Francois Birgand, available at
http://www3.bae.ncsu.edu/Regional-Bulletins/Modeling-Bulletin/qual2e.html.


Model Inputs
    •   Reach identification and river mile/kilometer data
    •   Computational elements flag field data
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                                                                     Appendix A: Model Fact Sheets
    •  Hydraulic data
    •  Biochemical oxygen demand and dissolved oxygen rate constants
    •  Initial conditions
    •  Incremental inflow
    •  Headwater sources
    •  Point source or withdrawal


Users' Guide
Available online: http://smig.usgs.gov/cgi-bin/SMIC/model homejages/modelhome?selection=qual2e.


Technical Hardware/Software Requirements

Computer hardware:
    •  PC


Operating system:
    •  PC-DOS, Windows


Programming language:
    •  FORTRAN


Runtime estimates:
    •  Minutes


Linkages Supported
BASINS


Related Systems
QUAL2K, DYNHYD5/WASP5, CE-QUAL-RIV1


Sensitivity/Uncertainty/Calibration
QUAL2E-UNCAS conducts uncertainty analysis


Model Interface Capabilities
    •  DOS version: QUAL2E reads text-based input file
    •  Latest QUAL2E Windows version provides Windows interface


References
Barnwell, T. O. and Brown, L. C. 1987. The Enhanced Stream  Water Quality Models QUAL2E and QUAL2E-
UNCAS: Documentation  and  User  Manual.  EPA/600/3-87/007. U.S.  Environmental Protection Agency,
Washington, DC.

Manual for Windows Interface available separately as: U.S. Environmental Protection Agency (USEPA).  1995.
QUAL2E Windows Interface Users Guide. EPA/823/B/95/003. U.S. Environmental Protection Agency, Washington,
DC.

Chapra, S.C. 1997. Surface Water Quality Modeling. McGRAW-HILL, Inc. New York
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                                                                       Appendix A: Model Fact Sheets
                                           QUAL2K


Contact Information
Steven C. Chapra
Professor, Berger Chair
Tufts University
Department of Civil & Environmental Engineering
Anderson Hall, Medford, MA 02155
(617)627-3654
Steven. chapra(@,tufts. edu
http://www.epa.gov/ATHENS/wwqtsc/html/qual2k.html


Download Information
Availability: Nonproprietary
http://www.epa.gov/ATHENS/wwqtsc/html/qual2k.html
Cost: N/A


Model Overview/Abstract
The QUAL2K model simulates nutrient dynamics, algal production, and dissolved oxygen with the impact of
benthic and carbonaceous demand in streams. QUAL2K is similar to QUAL2E but QUAL2K is enhanced with two
species of CBOD and internal sediment processes. In addition, QUAL2K models pH and alkalinity. The pathogen
die-off is modeled as a function of temperature,  light intensity, and settling. The model solves the time-variable
water quality variable under steady, nonuniform flow. QUAL2K can be applied to model steady state and dinurnal
time-variable situations.


Model Features
    •   Dissolved oxygen and oxygen demand
    •   Nutrients
    •   Tracer
    •   Algal dynamics
    •   Bacteria
    •   pH, alkalinity


Model Areas Supported
Watershed             None
Receiving Water        Medium
Ecological             Medium
Air                   None
Groundwater           None


Model Capabilities

Conceptual Basis
Rivers are conceptualized as a collection of reaches. Within each reach, the hydrogeometric properties are assumed
to be same. The reaches are further divided into a series of control volumes of the same length.
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                                                                         Appendix A: Model Fact Sheets
Scientific Detail
The governing equations of QUAL2K model are the advection-dispersion-reaction equations with external sources
and sinks. A flow balance is assumed, and steady, nonuniform flow is used to solve the advection. QUAL2K
assumes that the channel has a trapezoidal cross section. An empirical function is applied to obtain the dispersion
coefficient. The governing equations are solved with an implicit scheme in time and a backward difference in space.


Model Framework
Structural description of the model, internal linkages, such as one-dimensional model, internally coupled watershed
and one-dimensional stream models...

Narrow rivers and streams


Scale

Spatial Scale
    •   One-dimensional


Temporal Scale
    •   Steady state


Assumptions
    •   Steady, nonuniform flow
    •   Trapezoidal cross section channel
    •   Flow balance


Model Strengths
    •   A simple model with comprehensive nutrient, algal, and dissolved oxygen dynamics
    •   Easy to use, easy to understand
    •   Internal sediment  processes
    •   Complete documentation


Model Limitations
    •   One-dimensional channel cannot handle tidal impact
    •   Equal length elements
    •   Steady flow; not able to model variable flow condition


Application History
Application examples include the Wind River temperature TMDL in Washington State and biochemical oxygen
demand simulation in the Hanjiang River, China.


Model Evaluation
Not available


Model Inputs
    •   Reach identification and river mile/kilometer data
    •   Computational elements flag field data
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                                                                    Appendix A: Model Fact Sheets
    •  Hydraulic data
    •  Biochemical oxygen demand and dissolved oxygen rate constants
    •  Initial conditions
    •  Incremental inflow
    •  Headwater sources
    •  Point source or withdrawal


Users' Guide
Available online: http://www.epa.gov/ATHENS/wwqtsc/html/qual2k.html


Technical Hardware/Software Requirements

Computer hardware:
    •  PC


Operating system:
    •  Windows ME/2000/XP with MS Office 2000 or Higher


Programming language:
    •  Excel VBA


Runtime estimates:
    •  Minutes to hours


Linkages Supported
None


Related Systems
QUAL2E, CE-QUAL-RIV1, DYNHYD5/WASP5


Sensitivity/Uncertainty/Calibration
Not available

Model Interface Capabilities
    •  Microsoft Excel interface


References
Chapra, S.C. and Pelletier, G.J. 2003. QUAL2K: A Modeling Framework for Simulating River and Stream Water
Quality: Documentation and Users Manual.  Civil and Environmental Engineering Department, Tufts University,
Medford, MA.
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                                                                         Appendix A: Model Fact Sheets
                  REMM: Riparian Ecosystem Management Model


Contact Information
Richard Lowrance
U.S. Department of Agriculture
Agricultural Research Station
Southeast Watershed Research Laboratory
Coastal Plain Experiment Station
P.O. Box 946, Tifton, GA
(912) 386 3894
lorenz(@,tifton. cpes.peachnet.edu
http://sacs.cpes.peachnet.edu/remmwww/remm/remmoldwww/default.htm


Download Information
Availability: Nonproprietary
Cost: N/A

As of July 2004, REMM 1.0 is under testing. The testing version can be downloaded at
http://sacs.cpes.peachnet.edu/remmwww/remm/users.htm


Model Overview/Abstract
REMM has been developed as a tool that can help quantify the water quality benefits of riparian buffers. REMM
simulates the movement of surface and subsurface water; sediment transport and deposition; nutrient transport,
sequestration,  and cycling; and vegetative growth in riparian forest systems on a daily timestep. In REMM, the
riparian system is considered to consist of three zones between the field and the waterbody. Each zone includes litter
and three soil layers,  as well as  a plant community that can have six plant types in two canopy levels. REMM can be
used to  quantify  nitrogen and phosphorus  trapping in the riparian buffer zone,  determine buffer effectiveness,
investigate the long-term fate  of nutrients  in buffer zones, evaluate the  influence  of vegetation type on buffer
effectiveness, and determine the impacts of harvesting on buffer effectiveness. As of July 2004, REMM is still under
development and has been continuously updated. A user interface is being built to assist input and output data
management. The strength of REMM  is its capability to simulate subsurface compartments and comprehensive
nutrient cycling. Because of the model's complexity, application requires extensive data.


Model Features
    •    Surface and subsurface water movement
    •    Sediment and nutrients transport
    •    Nutrients cycling
    •    Vegetative growth


Model Areas Supported
Watershed              High
Receiving Water         None
Ecological              Medium (Vegetative: High)
Air                    None
Groundwater            Medium
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Model Capabilities

Conceptual Basis
In REMM, the riparian system consists of three zones between the field (drainage area) and the receiving waterbody.
Each zone includes litter and three soil layers that terminate at the bottom of the plant root system and a plant
community that can include six plant types in two canopy levels. Surface hydrology, erosion, vertical and horizontal
subsurface flows, carbon and nutrient dynamics, and plant growth that occur in each zone are modeled on a daily
timestep.


Scientific Detail
Movement and storage of water within riparian buffer systems is simulated by a process-based, two-dimensional
water balance on a daily basis. Infiltration is estimated using the explicit form of modified Green-Ampt equation.
Surface runoff is assumed to be generated when the sum of rainfall and upslope runoff depth exceeds the infiltration
capacity, also when the  top soil layer is saturated and cannot accept any additional water. REMM also includes
subsurface drainage  in  both  the  vertical and lateral directions. Vertical  subsurface drainage is simulated  as
gravitational drainage between horizons and  as deep groundwater seepage from the lower layer. The upward
evapotransporation flux is simulated in REMM using Darcy Buckingham equation given by Skaggs in the presence
of a shallow water table. In the absence of a  shallow water table, evapotransporation loss is limited to the soil layer
wilting point moisture content. A simple routing scheme is used to distribute the incoming upland runoff down the
riparian slope based on its depth and flow velocity.

Overland  soil  erosion is simulated using USLE.  Sediment  routing is performed using equations  applied in the
AGNPS model.

Carbon dynamics are simulated using the Century model, which divides carbon in the soil and residue (litter) layers
into different pools.  Soil nitrogen is modeled in organic forms associated with soil carbon, residue carbon, and
dissolved carbon and in inorganic forms as ammonium and nitrate. Nitrification,  denitrification, and immobilization
of nitrogen from plant residues are simulated. REMM simulates soil phosphorous in both organic and inorganic
forms. Partitioning of phosphorous into dissolved and adsorbed fractions is computed using the Langmuir isotherm.
Soil temperature is simulated in REMM using an empirical approach for the soil surface and a heat flux approach for
the  subsurface soil. Vegetation can be represented in REMM using up to 12 plant types in two canopies. A thorough
model simulating the photosynthesis, respiration, growth, and development of the vegetation is applied in REMM.
Consumption of water and nutrients are related to the increase in biomass of various vegetation types.


Model Framework
     •   Vegetative buffer system
     •   Three buffer zones
     •   Litter and three  soil layers
     •   Plant community (up to six plant types in two canopy levels)


Scale

Spatial Scale
     •   Field/hill slope


Temporal Scale
     •   Daily timestep


Assumptions
The model assumes that  the dynamics of each physical, chemical and biological component can be described by the
principal of conservation of mass.
                                                  305

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                                                                            Appendix A: Model Fact Sheets
Model Strengths
    •   Capability for simulating subsurface compartment
    •   Comprehensive nutrients cycling.


Model Limitations
    •   Extensive data requirement
    •   Employs a simplified method to distribute the incoming upland runoff down the riparian slope based on its
        depth and flow velocity, which limits the accuracy of flow routing and, hence, infiltration calculation


Application History
REMM is still in the development stage, with a testing version released. Testing is being performed using data from
riparian buffer sites located on Gibbs Farm in Tifton, Georgia.


Model Evaluation
Testing is being performed using data from riparian buffer sites located on Gibbs Farm in Tifton, Georgia.


Model Inputs
    •   Daily weather data
            o   daily precipitation amount (mm)
            o   duration of precipitation (hr)
            o   ratio of time to rainfall peak/rainfall duration
            o   ratio of max. rainfall intensity/average rainfall intensity
            o   max. daily temperature (deg C)
            o   min. daily temperature (deg  C)
            o   daily solar radiation (langleys/day)
            o   wind velocity (m/s)
            o   wind direction (deg from north)
            o   dew point temperature (deg C)
    •   Daily field input data
            o   surface runoff depth (mm/ha)
            o   subsurface depth (mm/ha)
            o   sediment loading (kg/ha)
            o   sediment-clay fraction
            o   sediment-silt fraction
            o   sediment-small aggregate fraction
            o   sediment-large aggregate fraction
            o   sediment-sand fraction
            o   carbon-humus-active-surface runoff (kg/ha)
            o   CN-ratio-surface runoff
            o   CP-ratio-surface runoff
            o   carbon-humus-active-suburface flow (kg/ha)
            o   CN-ratio subsurface flow
            o   CP-ratio subsurface flow
            o   carbon-humus-active-sediment (kg/ha)
            o   CN-ratio sediment
            o   CP-ratio sediment
            o   ammonium-surface runoff (kg/ha)
            o   ammonium-subsurface flow (kg/ha)
            o   ammonium-sediment (kg/ha)
            o   nitrate-surface runoff (kg/ha)
            o   nitrate-subsurface flow (kg/ha)
            o   phosphorus-surface runoff (kg/ha)
                                                  306

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                                                                           Appendix A: Model Fact Sheets
        o   phosphorus-subsurface flow (kg/ha)
        o   phosphorus-sediment (kg/ha)
        o   rainfall-carbon-humus-active (kg/mm-ha)
        o   rainfall-CN ratio
        o   rainfall-CP ratio
        o   rainfall-nitrate (kg/mm-ha)
        o   rainfall-ammonium (kg/mm-ha)
        o   rainfall-phosphorus (kg/mm-ha)

•   Zone parameters:
        o   field surface drainage area (ha)
        o   field subsurface drainage area (ha)
        o   field length (m)
        o   stream depth (m)
        o   latitude of location
        o   zone length (m)
        o   zone width (m)
        o   zone slope (%)
        o   seepage from aquiclude (mm/day)
        o   number of surface channels

•   Litter layer parameters:
        o   layer depth (cm)
        o   evaporation factor
        o   evaporation constant
        o   litter transmission factor
        o   litter moisture (mm)
        o   litter humus moisture holding capacity by weight (%)
        o   litter residue moisture holding capacity weight (%)
        o   litter bulk density (g/cm3)
        o   litter CaCo3 (g/kg)
        o   litter P group
        o   litter base saturation (%)
        o   ammonium adsorption coefficients
        o   ammonium absorption coefficients
        o   litter pH
        o   litter C structural pool (kg/ha)
        o   litter C metabolic pool (kg/ha)
        o   litter C active pool (kg/ha)
        o   litter C slow pool (kg/ha)
        o   litter C passive pool (kg/ha)
        o   litter C lignin (kg/ha)
        o   litter ammonium pool (kg/ha)
        o   litter nitrate pool (kg/ha)
        o   litter N structural pool (kg/ha)
        o   litter N metabolic pool (kg/ha)
        o   litter N active pool (kg/ha)
        o   litter N slow pool (kg/ha)
        o   litter N passive pool (kg/ha)
        o   litter P structural pool (kg/ha)
        o   litter P metabolic pool (kg/ha)
        o   litter P active pool (kg/ha)
        o   litter P slow pool (kg/ha)
        o   litter P passive pool (kg/ha)
        o   litter P labile inorganic pool (kg/ha)
        o   litter P active inorganic pool (kg/ha)
                                                307

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                                                                            Appendix A: Model Fact Sheets
            o   litter P stable inorganic pool (kg/ha)
    •   Soil layer parameters (repeat for 3 soil layers):
            o   rock density (g/cm3)
            o   rock fraction (g/g)
            o   pore size distribution index
            o   bubbling pressure head (cm)
            o   soil layer depth (cm)
            o   wilting point (cm/cm)
            o   field capacity (cm/cm)
            o   porosity (cm/cm)
            o   initial moisture content (cm/cm)
            o   saturated conductivity (cm/hr)
            o   sand content (%)
            o   silt content (%)
            o   clay content (%)
            o   bulk density (g/(cm)3)
            o   CaCO3 content
            o   base saturation
            o   initial carbon structural pool (kg/ha)
            o   initial carbon metabolic pool (kg/ha)
            o   initial carbon active pool (kg/ha)
            o   initial carbon slow pool (kg/ha)
            o   initial carbon passive pool (kg/ha)
            o   initial carbon lignin pool (kg/ha)
            o   initial nitrogen ammonium pool (kg/ha)
            o   initial nitrogen nitrate pool (kg/ha)
            o   initial nitrogen structural pool (kg/ha)
            o   initial nitrogen metabolic pool (kg/ha)
            o   initial nitrogen active pool (kg/ha)
            o   initial nitrogen slow pool (kg/ha)
            o   initial nitrogen passive pool (kg/ha)
            o   initial phosphorus structural pool (kg/ha)
            o   initial phosphorus metabolic pool (kg/ha)
            o   initial phosphorus active pool (kg/ha)
            o   initial phosphorus slow pool (kg/ha)
            o   initial phosphorus passive pool (kg/ha)
            o   initial inorganic phosphorus labile pool (kg/ha)
            o   initial inorganic phosphorus active pool (kg/ha)
            o   initial inorganic phosphorus stable  pool (kg/ha)


Users' Guide
Available online: http://sacs.cpes.peachnet.edu/remmwww/remm/documents/Userguide.pdf
Hard copy of technical document is available upon request.
Technical Hardware/Software Requirements

Computer hardware:
    •   PC
Operating system:
    •   Windows
                                                   308

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                                                                         Appendix A: Model Fact Sheets
Programming language:
    •   C++


Runtime estimates:
    •   Seconds to minutes


Linkages Supported
None


Related Systems
None


Sensitivity/Uncertainty/Calibration
Not available


Model Interface Capabilities
    •   A user interface is under development


References
U.S. Department of Agriculture, Agricultural Research Service (USDA-ARS). Riparian Ecosystem Management
Model:   User's   manual.   USDA-ARS   Southeast   Watershed   Research   Laboratory.   Tifton,   GA.
.

Altier, L.S., R. Lowrance, R.G.  Williams, S. P. Inamdar, D. D. Bosch, J. M. Sheridan, R. K. Hubbard, and D. L.
Thomas. 2002. Riparian Ecosystem Management Model - Simulator for Ecological Processes in Riparian  Zones.
Report 46. U.S. Department of Agriculture, Agricultural Research Service, Conservation Research.

Lowrance, R., L.S.  Altier, R.G. Williams, S.P. Inamdar, D.D. Bosch, J.M. Sheridian, D.L. Thomas and R.K.
Hubbard. 1998. The Riparian Ecosystem Management Model: Simulator for ecological processes in riparian zones.
In Proceedings of the First Federal Interagency Hydrologic Modeling Conference, Las Vegas, NV, April 1998, pp.
1.81-1.88.

Inamdar, S.P., J.M. Sheridan, R.G.  Williams, D.D. Bosch, R. Lowrance, L.S. Altier,  D.L. Thomas. 1998. The
Riparian Ecosystem Management Model: Evaluation  of the hydrology component.  In Proceedings of the First
Federal Interagency Hydrologic Modeling Conference, Las Vegas, NV, April 1998, pp. 7.17-7.24.

Bosch, D.D., R.G. Williams, S.P. Inamdar, J.M. Sheridan, and R. Lowrance. 1998. Erosion and sediment transport
through riparian forest buffers. In Proceedings of the First Federal Interagency Hydrologic Modeling Conference,
Las Vegas, NV, April 1998, pp. 3.31-3.38.

Inamdar, S.P., L.S. Altier, R. Lowrance, R.G. Williams, R. Hubbard. 1998. The Riparian Ecosystem Management
Model: Nutrient Dynamics. In Proceedings of the First Federal Interagency Hydrologic Modeling Conference, Las
Vegas, NV, April 1998, pp. 1.73-1.80.

L.S. Altier, R.G. Williams, R. Lowrance, and  S.P. Inamdar.  1998. The Riparian Ecosystem Management Model:
Plant growth component. In Proceedings of the First Federal Interagency Hydrologic Modeling Conference, Las
Vegas, NV, April 1998, pp. 1.33-1.40.

Williams, R.G., R. Lowrance, L.S. Altier, and S.P. Inamdar. 1998. The Riparian Ecosystem Management Model: A
demonstration. In Proceedings of the First Federal Interagency Hydrologic Modeling Conference, Las Vegas, NV,
April 1998, pp. 8.133-8.138.
                                                 309

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                                                                         Appendix A: Model Fact Sheets
                                            RMA-11
Contact Information
Ian P. King
Resource Modelling Associates
9 Dumaresq Street
Gordon
NSW 2072, Australia
#61-2-9498-1043
ikingrma(@,bigpond. net, au
Download Information
Availability: Proprietary
Cost:
RMA-11 (One-dimensional/Two-dimensional)                                          $1250
RMA-11 (One-dimensional/Two-dimensional/Three-dimensional)                         $2500
RMA-2 (One-dimensional/Two-dimensional hydrodynamics)                              $1500
RMAGEN (Pre-processor graphics)                                                   $750
RMAPLT (Post-process graphics)                                                     $750


Model Overview/Abstract
RMA-11 is a finite element water quality model for simulation of one-, two-, or three-dimensional estuaries, bays,
lakes, and rivers. It is also capable of simulating one- and two-dimensional approximations to systems. It is designed
to accept velocity and depth input from the results of the  two-dimensional hydrodynamic model or the three-
dimensional stratified flow model.  The input hydrodynamic data are used in the solution of the advection-diffusion
constituent transport equations. The model operates independently of the timesteps in the hydrodynamic model, and
the input data are automatically interpolated.


Model Features
    •   Finite element water quality model.
    •   Constituents that may be included in the simulation are
        o  Temperature with a full atmospheric heat budget at the water surface
        o  Biological oxygen demand/dissolved oxygen
        o  The nitrogen cycle
        o  The phosphorous cycle
        o  Algae growth and decay
        o  Cohesive suspended sediment
        o  Non-cohesive suspended sediment such as sand
        o  Salinity
        o  Coliform


Model Areas Supported
Watershed              None
Receiving Water         High
Ecological              None
                                                310

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                                                                            Appendix A: Model Fact Sheets
Air                     None
Groundwater            None


Model Capabilities

Conceptual Basis
RMA-11 represents the latest in the RMA model development series. The capabilities of all the earlier models, in
particular RMA4Q, have  been systematically incorporated into the  latest version. In addition, the advection-
diffusion-settling  capabilities have been  expanded to permit  fully three-dimensional simulation. This model is
capable of one-, two-,  three-dimensional  approximations in any combination. It also has  a bed model capable of
tracking the evolution of cohesive or noncohesive sediments.


Scientific Detail
The  two- and  three-dimensional advection diffusion  equations are simulated for conservative  and decaying
constituents. The equations are solved by the finite element method. The prototype system is represented by a
network of triangles and quadrilaterals/cubes and prisms that may have curved sides if desired.  Within each element,
the model uses quadratic approximations for water quality constituents. A fully implicit solution scheme is used for
solution of time dependent problems. The primary features of RMA-11 are as follows:

    •   RMA11  shares many of the  same capabilities of the RMA-2/RMA-10 hydrodynamics models, including
        irregular boundary configurations, variable element size, one-dimensional elements, and the wetting and
        drying of shallow portions of the modeled region.
    •   RMA 11  may be executed in steady state or dynamic mode. The velocities supplied may be constant or
        interpolated from an input file (this may be RMA-2 or RMA-10 output).
    •   Source pollutant loads may  be input to  the  system either at discrete points, over elements, or as fixed
        boundary values.
    •   In formulating the element  equations, the element coordinate  system is realigned with the local flow
        direction. This permits the longitudinal and transverse diffusion terms to be separated, with the net effect
        being to limit excessive constituent dispersion in the direction transverse to flow.
    •   For increased  computational efficiency, up to fifteen constituents may be modeled at one time, each with
        separately defined loading, decay, and initial conditions.
    •   The model may be used to simulate temperature with a full heat exchange with the  atmosphere, nitrogen
        and phosphorous nutrient cycles,  biochemical oxygen demand/dissolved  oxygen, algae, cohesive  or
        noncohesive suspended sediments, and other nonconservative constituents.
    •   A multilayer bed model for the cohesive sediment transport constituent keeps track of thickness and
        consolidation of each layer.


Model Framework
RMA-11 is a finite element water quality  model for simulation of one-, two-, or three-dimensional estuaries, bays,
lakes, and rivers.


Scale

Spatial Scale
    •   Operation unit one-, two-, or three-dimensional


Temporal Scale
    •   User-defined timestep


Assumptions
    •   Represents the waterbody in a finite element model
                                                   311

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                                                                         Appendix A: Model Fact Sheets
Model Strengths
    •   Simulates temperature with a full heat exchange with the atmosphere, nitrogen and phosphorous nutrient
        cycles,  biochemical  oxygen  demand/dissolved oxygen,  algae, cohesive or noncohesive  suspended
        sediments, and other nonconservative constituents
    •   Has a pre-and post-processor (RMAGEN and RMAPLT)


Model Limitations
    •   Uses finite element solution.


Application History
It has recently been used by Australian Water and Coastal Studies for studies of sand transport and power station
effluents in Lake Macquarie and bacteria and nutrient loadings and dispersion in Salt Pan Creek, Sydney. It has also
been used for the  waters surrounding Hong Kong and is currently being used for a study of Moreton Bay near
Brisbane.

The models  have  been  applied in  numerous coastal  systems,  estuaries, and rivers around the world. Resource
Management Associates (RMA) in  California has  made numerous outfall location studies in San Francisco Bay,
including studies for East Bay Municipal Utility District, City of San Francisco, and Tri Valley Waste Management
District. The U.S. Army  Corps of Engineers has used the models extensively in its sedimentation studies for coastal
estuary systems. Examples include the Columbia River in Oregon and the Atchafalaya Estuary in Louisiana. RMA-
4,  along with earlier version of  RMA-2,  was selected by  Brigham  Young University for  inclusion  in its
commercially marketed FASTTABS (now known as SMS) system.


Model Evaluation
See literature.


Model Inputs
    •   Initial conditions
    •   Time sequences of boundary conditions (inputs from watershed sources and discharges)
    •   Geometry of waterbody
    •   Physical coefficients
    •   Biological and chemical reaction rates


Users' Guide
Available with purchase  of model


Technical  Hardware/Software Requirements

Computer hardware:
    •   PC-DOS or UNIX


Operating system:
    •   PC-DOS or UNIX


Programming language:
    •   FORTRAN
                                                312

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                                                                        Appendix A: Model Fact Sheets
    •   Used on IBM PCs, UNIX  workstations, Dec VAX systems, and Cray super computers. Source and
        executable versions of the models are available for the finite element models.


Runtime estimates:
    •   Minutes to hours


Linkages Supported
RMA-2 and RMA-10


Related Systems
RMA-l, RMAGEN, RMA11PR, RMA4QPR, RMAPLT, RMA-2, RMA-10, CONVRM4 and CONVRM4Q


Sensitivity/Uncertainty/Calibration
Not available


Model Interface Capabilities
    •   RMA-l and RMAGEN are pre-processor programs used to aid construction and display of finite element
        networks.
    •   RMA-2 simulation results generate current vectors and stage for input into RMA-l 1.
    •   RMAPLT is a graphical postprocessor program for development of (1) velocity vector plots, (2) contour
        plots of constituent concentration, water surface elevation, or velocity magnitude, and (3) time histories of
        these parameters for selected locations.


References
King, I. P. 1998. RMA-11  - A Three Dimensional Finite Element Model For  Water  Quality in Estuaries and
Streams. Department of Civil and Environmental Engineering, University of California, Davis,  CA.
                                                313

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                                                                        Appendix A: Model Fact Sheets
                                            SED2D


Contact Information
Joseph V. Letter, Jr.
U.S. Army Corps of Engineers
Engineer Research and Development Center
Waterways Experiment Station
Coastal and Hydraulics Laboratory
Hydrologic Systems Branch
3 909 Halls Ferry Road
Vicksburg,MS39180
(601)634-2730
tabs(@,hl.wes.army.mil
http://chl.wes.army.mil/software/tabs


Download Information
Availability: Proprietary
Cost: Contact distributor

Organizations other than the U.S. Corps of Engineers can obtain the model from the vendors listed below; however,
WES cannot provide support nor offer guarantees of suitability to users outside the Corps of Engineers.

 •   Resource Management Associates (RMA), 4171 Suisun Valley Rd, Suite C, Suisun,  CA (USA) 94585. Phone
    707-864-2950
 •   Brigham Young University (BYU), Engineering Computer Graphics Laboratory, 368B CB, Provo, UT (USA)
    84602. Phone 801-378-2812. A company named BOSS Corporation handles their distribution (1-800-488-
    4775).


Model Overview/Abstract
SED2D, formerly STUDH, is a two-dimensional numerical model for depth-averaged transport of cohesive or a
representative grain size of noncohesive sediments and their deposition, erosion, and formation of bed deposits.


Model Features
    •   Sediment transport
    •   Deposition
    •   Erosion


Model Areas Supported
Watershed              None
Receiving Water         High
Ecological              None
Air                    None
Groundwater            None
                                               314

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                                                                           Appendix A: Model Fact Sheets
Model Capabilities

Conceptual Basis
SED2D provides a high level of sophistication in its representation of cohesive sediment bed dynamics and water
column exchange. The SED2D model can execute simultaneously with or externally linked with the RMA-2 model.


Scientific Detail
The derivation of the basic finite element formulation is presented in Ariathurai (1974) and Ariathurai, Mac Arthur,
and Krone (1977) and is summarized below. The model does four major computations:

1. Convection-Diffusion Governing Equation
2. Bed Shear Stress Calculation
3. The Bed Source/Sink Term
4. The Bed Strata Discretization

The model simulates cohesive and noncohesive sediment transport. Horizontal water column transport includes
advection and shear dispersion. Cohesive sediment transport is represented by a single size class with concentration-
dependent settling to approximately account for flocculation or aggregation and disaggregation.  Water column-bed
sediment and sorbed contaminant exchange includes bottom-stress dependent-deposition and bottom stress and bed-
shear-strength-dependent  erosion or resuspension.  Cohesive bed erosion by mass erosion and surface erosion
processes are represented. Cohesive sediment beds are represented by a time-varying number of layers that increase
and decrease in number during periods of deposition and resuspension, respectively. Although the model does not
include a mathematically formulated consolidation simulation, the thickness, void ratio, density, and shear strength
of the layers vary with time since deposition, through the use of experimentally determined  relationships. Vertical
advection of sediment and sorbed material in the bed is implicitly represented by the dynamic bed layering process.


Model Framework
SED2D WES requires that hydrodynamic data be externally supplied, usually by a numerical hydrodynamic model.
The TABS-MD modeling system has been designed to satisfy this and other needs for a comprehensive modeling
package. TABS-MD consists of RMA-2 WES, a general-purpose program for hydrodynamic modeling, in addition
to SED2D WES. The graphical user interface, SMS, and a number of utility programs are used to develop input,
translate data, analyze output, and provide graphical output from the models.


Scale

Spatial Scale
    •   Two-dimensional operation unit


Temporal Scale
    •   User-defined timestep


Assumptions
    •   The model considers a single, effective grain size during each simulation.
    •   An implicit assumption of the SED2D WES model is that the changes in the bed  elevation due to erosion
        and/or deposition do not significantly affect the flow field.
    •   The sediment transport  model formulation assumes that the  input geometric  mesh and the resulting
        hydrodynamic solution from RMA-2 are  of adequate resolution, accuracy,  and  quality to allow for an
        accurate and reasonable solution to the governing sediment transport equation to be solved.


Model Strengths
    •   The model simulates cohesive and noncohesive sediment transport.
                                                  315

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                                                                          Appendix A: Model Fact Sheets
    •   It is useful for both deposition and erosion studies and, to a limited extent, for stream width studies.
    •   It has the ability to compute sediment loadings and bed elevation changes.


Model Limitations
    •   Both clay  and sand may be analyzed, but the model considers a single, effective grain size during each
        simulation. Therefore, a separate model run is required for each effective grain size.
    •   Fall velocity must be prescribed along with the water surface  elevations, x-velocity, y-velocity, diffusion
        coefficients bed density, critical shear stresses for erosion, erosion rate constants, and critical shear stress
        for deposition.
    •   The program does not compute water surface elevations or velocities; these data must be provided from an
        external calculation of  the  flow  field.  For most  problems,  a numerical model  for hydrodynamic
        computations, RMA-2 WES, is used to generate the water surface elevations and velocities.
    •   In addition, the sediment transport model formulation assumes that  the input  geometric mesh and  the
        resulting hydrodynamic solution from RMA-2 are of adequate resolution, accuracy, and quality to allow for
        an accurate and reasonable solution to the governing sediment transport equation to be solved. In such a
        case, then  the mathematical solution from SED2D will potentially have severe oscillations with negative
        concentrations.


Application History
Refer to References


Model Evaluation
See publications.


Model Inputs
    •   Initial conditions
    •   Time sequences of boundary conditions
    •   Geometry  mesh
    •   Physical coefficients


Users' Guide
Available online: http://chl.erdc.usace.army.mil/CHL.aspx?p=s&a=ARTICLES:483


Technical Hardware/Software Requirements

Computer hardware:
    •   PC


Operating system:
    •   PC-DOS


Programming language:
    •   FORTRAN


Runtime estimates:
    •   Minutes to hours
                                                 316

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                                                                         Appendix A: Model Fact Sheets
Linkages Supported
RMA-2, FastTABS


Related Systems
SED3D


Sensitivity/Uncertainty/Calibration
Not available


Model Interface Capabilities
    •   A computer program (developed at the U.S. Army Corps of Engineers' Waterways Experiment Station
        [WES] and Brigham Young University [BYU]), called FastTABS, provides a graphical, point and click
        means for performing pre-  and post-processing for surface water numerical models and can be used to
        process data for SED2D.


References
Hayter, E.J., M.A. Bergs, R. Gu, S.C. McCutcheon, and S. J. Smith.  1996. SED2D, A Finite Element Model for
Cohesive Sediment Transport. Prepared for U. S. Environmental Protection Agency by  Clemson University,
Clemson, SC.

Ackers, P.,  and W. R. White. 1973.  Sediment Transport: New approach and analysis.  Journal of the Hydraulics
Division, American Society of Civil Engineers, no. HY11.

Ariathurai, R. 1974. A Finite Element Model for  Sediment Transport in Estuaries. Ph. D.  thesis,  University of
California, Davis.

Ariathurai, R., R.C. MacArthur, and R.B. Krone. 1977. Mathematical Model of Estuarial  Sediment  Transport.
Technical Report D-77-12. U.S. Army Engineer Waterways Experiment Station, Vicksburg, MS.

Krone, R.B. 1962. Flume  Studies of the Transport of Sediment in Estuarial Shoaling Processes,  Final Report.
Hydraulic  Engineering  Laboratory  and  Sanitary  Engineering Research Laboratory,  University of  California,
Berkeley.

McAnally, W.H., and W.A. Thoma,.  1980. Shear Stress Computations in a Numerical Model for Estuarine Sediment
Transport. Memorandum for Record, U.S. Army Engineer Waterways Experiment Station, Vicksburg, MS.

Swart, D.H.  1976.  Coastal Sediment Transport,  Computation  of Longshore Transport. Report 968, Part 1. Delft
Hydraulics Laboratory, The Netherlands.

White, W.R., H. Milli, and A.D.  Crabbe. 1975. Sediment Transport Theories: An Appraisal of Available Methods.
Report Int. 119. Hydraulics Research Station, Wallingford, England, vols. 1-2.
                                                 317

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                                                                   Appendix A: Model Fact Sheets
     SED3D:  Three-Dimensional Numerical Model of Hydrodynamics and
                    Sediment Transport in Lakes and Estuaries


Contact Information
Steven McCutcheon
U.S. Environmental Protection Agency
Office of Research and Development (ORD)
National Exposure Research Lab
Ecosystems Research Division
Center for Exposure Assessment Modeling (CEAM)
960 College Station Road
Athens, Georgia 30605-2700
(706) 355-8235 or (706)355-8400
mccutcheon.steven(g)epamail.epa.gov or ceanngjepamail. epa.gov
http ://www. epa. gov/ceampubl/swater/sed3 d/


Download Information
Availability: Nonproprietary
Cost: N/A


Model Overview/Abstract
SED3D simulates  the  flow and sediment transport in lakes,  estuaries, harbors, and costal waters. SED3D is a
dynamic modeling  system that can be used to simulate the flow and sediment transport in various waterbodies under
the forcing of winds, tides, freshwater inflows, and density gradients with the influence of the Coriolis acceleration,
complex bathymetry, and shoreline geometry.


Model Features
   •   Hydrodynamics
   •   Sediment
   •   Transport
   •   Lakes
   •   Estuaries
   •   Harbors
   •   Coastal waters
   •   Three-dimensional


Model Areas Supported
Watershed            None
Receiving Water        High
Ecological            Low
Air                  None
Groundwater           None
                                             318

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                                                                          Appendix A: Model Fact Sheets
Model Capabilities

Conceptual Basis
SED3D simulates the flow and sediment transport in lakes, estuaries, harbors, and costal waters.  SED3D is  a
dynamic modeling system that can be used to simulate the flow and sediment transport in various waterbodies under
the forcing of winds, tides, freshwater inflows, and density gradients with the influence of the Coriolis acceleration,
complex bathymetry, and shoreline geometry.


Scientific Detail
Given  proper boundary  and initial conditions, the model can compute the time-dependent, three-dimensional
velocity components  (u,v,w), temperature  (T), salinity (S), and suspended  sediment  concentration  (c) in the
Cartesian and vertically stretched grid system (x,y,s). The model contains a free surface, as opposed to a rigid-lid,
with proper boundary  conditions for velocity, temperature, salinity, and sediment. A simplified second-order closure
model  of turbulent transport is used to compute the vertical eddy viscosity and diffusivity contained  in the model
equations.


Model Framework
SED3D can be  run in a three-dimensional  mode, a two-dimensional vertically integrated 'x-y' mode, or a two-
dimensional 'x-z' mode.


Scale

Spatial Scale
    •   Three-dimensional operation unit


Temporal Scale
    •   User-defined timestep


Assumptions
To be determined


Model Strengths
    •   Can simulate the flow and sediment transport in lakes, estuaries, harbors, and coastal waters.
    •   Provides a three dimensional numerical grid and  a  quasi-second-order  closure scheme and sediment
        transport capabilities.


Model Limitations
    •   The  SED3D  model and its  associated  files  are designed for Digital Equipment Corporation (DEC)
        installation, compilation, link edit, and execution. This model has not been successfully compiled, linked,
        or executed at the EPA CEAM using a DOS-based FORTRAN development tool
    •   Complicated


Application History
To be determined
                                                 319

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                                                                   Appendix A: Model Fact Sheets
Model Evaluation
To be determined


Model Inputs
    •  Initial conditions
    •  Time sequences of boundary conditions
    •  Reservoir geometry
    •  Physical coefficients
    •  Time sequences of hydrometeorological conditions


Users' Guide
Document must be requested from contact:

Sheng,  Y.P., D.E.  Eliason, X.J. Chen, and J.-K.  Choi. 1991 A Three-Dimensional  Numerical Model  of
Hydrodynamics and Sediment Transport in Lakes and Estuaries: Theory, Model Development and Documentation.
U.S. Environmental Protection Agency, Athens GA.


Technical Hardware/Software Requirements

Computer hardware:
    •  DEC VAX 6310


Operating system:
    •  DEC VAX VMS version 5.3-1


Programming language:
    •  DEC VAX FORTRAN version 5.5-98
    •  VAX VMS/DCL LINK version V05-05


Runtime estimates:
    •  Minutes to hours or  longer depending on the complexity of the system


Linkages Supported
None


Related Systems
None


Sensitivity/Uncertainty/Calibration
Not available


Model Interface Capabilities
Not available
                                             320

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                                                                        Appendix A: Model Fact Sheets
References
Sheng, Y.P.,  D.E.  Eliason, X.-J.  Chen,  and J.-K.  Choi.  1991.  A  Three-Dimensional Numerical Model of
Hydrodynamics and Sediment Transport in Lakes and Estuaries: Theory, Model Development and Documentation.
U.S. Environmental Protection Agency, Athens GA.
                                                321

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                                                                           Appendix A: Model Fact Sheets
                                            SHETRAN


Contact Information
Professor P.E. O'Connell
Professor of Water Resources Engineering
Department of Civil Engineering
University of Newcastle
Newcastle upon Tyne
NE1 7RU, UK
(44) (0)191222 6319
p.e.o'connell(@,ncl.ac.uk
http://www.ncl.ac.uk/wrgi/wrsrl/rbms/rb ms.html#SHETRAN


Download Information
This information could not be obtained from either an Internet or recent publication search.


Model Overview/Abstract
The SHETRAN system was developed by the Water Resources Systems Research Laboratory (WRSRL), is based
on the SHE (Systeme Hydrologique Europeen), and was developed by international collaboration between groups in
the United Kingdom, Denmark, and France.  SHETRAN is a three-dimensional, coupled surface/subsurface,
physically-based,  spatially-distributed, finite-difference model for  coupled  water  flow,  multifraction sediment
transport and multiple, reactive solute transport in river basins. It gives a detailed description in time and space of
the flow and transport in the basin, which can be visualized using animated graphical computer displays. This makes
it a powerful tool for use in studying the environmental impacts of land erosion, pollution, and the effects of changes
in land use and climate and in studying surface  water and groundwater resources and management. SHETRAN is
currently being integrated in a decision-support  system to maximize its usefulness in environmental impact
management.


Model Features
The main  difference between SHETRAN and existing physically based, spatially distributed, river basin modeling
systems lies in its comprehensive nature and its  capabilities for modeling  subsurface flow and transport.  The
subsurface is treated as a variably saturated heterogeneous porous medium and fully three-dimensional flow and
transport can be simulated for combinations of confined, unconfmed, and perched systems. The "unsaturated zone"
is modeled as an integral part of the  subsurface, and subsurface flow and transport are coupled directly to surface
flow and transport. So, for  example, it is possible to model flow and transport in "deep" groundwater, while at the
same time modeling flow  and  transport in complex near-surface regions,  which respond rapidly to rainfall and
strongly affect recharge and surface runoff.

SHETRAN represents physical processes using physical laws applied on a three-dimensional finite-difference mesh.
The mesh follows  the topography of the basin, and the parameters of the physical laws vary from point  to point on
the mesh, thus allowing the representation of the spatial heterogeneity of the physical properties of the rocks, soils,
and vegetation cover, etc. SHETRAN can be used for basins of less  than 1 km2 to 2500 km2 in area and typically
uses a mesh with 20,000 finite-difference cells, stacked 50 deep, to model hourly flow and transport for periods of
up to a few decades.  Stream channels are simulated as a network of links, each link running along the edge  of a
finite-difference cell. The results from SHETRAN simulations can be viewed and analyzed using the SHEGRAPH
dedicated graphics package.
                                                 322

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                                                                           Appendix A: Model Fact Sheets
Model Areas Supported
Watershed               Medium
Receiving Water         High
Ecological               Low
Air                     None
Groundwater            High


Model Capabilities
The main difference between SHETRAN and existing physically based, spatially distributed, river basin modeling
systems lies in its comprehensive nature and its capabilities for modeling subsurface flow  and transport. The
subsurface is treated as a variably-saturated heterogeneous porous medium and fully three-dimensional flow and
transport can be simulated for combinations of confined, unconfmed, and perched systems. The "unsaturated zone"
is modeled as an integral part of the  subsurface, and subsurface flow and transport are coupled directly to surface
flow and transport. So, for example, it is possible to model flow and transport in "deep" groundwater, while at the
same time modeling flow and transport  in complex  near-surface regions, which respond rapidly to rainfall and
strongly affect recharge and surface runoff.


Scale

Spatial Scale
    •   Physically based, spatially distributed


Temporal Scale
    •   User-defined, variable timestep.


Assumptions
Represents physical processes using physical laws applied on a three-dimensional finite-difference mesh. The mesh
follows the topography of the basin, and the parameters of the physical laws vary from point to point on the mesh,
thus  allowing the representation of the spatial  heterogeneity of the physical properties of the rocks, soils, and
vegetation cover, etc. Can be used for basins 1  km2 to 2500 km2 in area, and typically uses a mesh with 20,000
finite-difference cells, stacked 50 deep, to model hourly flow and transport for  periods of up to a few  decades.
Simulates stream channels as a network of links, each link running along the edge of a finite-difference cell.


Model Strengths and Limitations
This information could not be obtained from either an Internet or recent publication search.


Model Limitations
This information could not be obtained from either an Internet or recent publication search.


Application History
Examples of SHETRAN validation and application studies include
    •   Validation for water flow and the effect of fire on erosion, Rimbaud basin, France.
    •   Validation for nitrate transport, Slapton Wood basin, United Kingdom.
    •   Validation for flow and conservative and nonconservative solute transport through complex Quaternary
        deposits, Cumbria, United Kingdom.
    •   Validation for flow and  solute transport in a perched system at Hazelrigg, Lancaster, United Kingdom.
    •   Validation for erosion at Draix badlands gully basins, France.
    •   Validation of snowmelt  modeling, Upper Sheep Creek, Idaho, USA.
                                                  323

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                                                                         Appendix A: Model Fact Sheets
    •   Study of climate change impacts for Mediterranean desertification: Cobres (Portugal), Mula (Spain), and
        Agri (Italy) basins.
    •   Impact assessment for radionuclide transport in the near surface and surface regions following releases
        from a deep underground repository for radioactive wastes, United Kingdom.


Model Evaluation
This information could not be obtained from either an Internet or recent publication search.


Model Inputs
This information could not be obtained from either an Internet or recent publication search.


Users' Guide
This information could not be obtained from either an Internet or recent publication search.


Technical Hardware/Software Requirements

Computer hardware:
This information could not be obtained from either an Internet or recent publication search.


Operating system:
This information could not be obtained from either an Internet or recent publication search.


Programming language:
This information could not be obtained from either an Internet or recent publication search.


Runtime estimates:
This information could not be obtained from either an Internet or recent publication search.


Linkages Supported
This information could not be obtained from either an Internet or recent publication search.


Related Systems
This information could not be obtained from either an Internet or recent publication search.


Sensitivity/Uncertainty/Calibration
This information could not be obtained from either an Internet or recent publication search.


Model Interface  Capabilities
SHETRAN models results can be viewed and analyzed using the SHEGRAPH dedicated graphics package.


References
Water Resources Group, Dept. of Civil Engineering, University of Newcastle, Tyne, UK.
.

Water Resource Systems Research Laboratory (WRSRL), Dept.  of Civil Engineering at the University of Newcastle,
Tyne, UK. .
                                                 324

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                                                                           Appendix A: Model Fact Sheets
                  SLAMM:  Source Loading and Management Model


Contact Information
Robert E. Pitt
Professor, Director of Environmental Engineering Programs
The University of Alabama
Department of Civil and Environmental Engineering
Box 870205
Tuscaloosa, AL 35487-0205
(205) 348-2684
rpitt(@,coe.eng.ua.edu
http://unix.eng.ua.edu/~rpitt/SLAMMDETPOND/WinSlammMainWINSLAMM book.html


Download Information
Availability: Proprietary, http://www.winslamm.com/
Cost: $200


Model Overview/Abstract
SLAMM was originally  developed to better understand the relationships between sources of urban pollutants and
runoff  quality (Pitt,  1993). SLAMM  is strongly based  on field observations, with minimal  reliance  on pure
theoretical processes that have not been adequately documented or confirmed in the field. The EPA's Nationwide
Urban Runoff Program (NURP) has contributed significantly to the development of empirical relationships used in
SLAMM.  SLAMM now also includes a wide variety of source area and outfall control practices (e.g., infiltration
practices, wet detention ponds, porous pavement, street cleaning, catch basin cleaning, and grass swales). Beginning
with version 5, SLAMM  is Windows-based and thus is called WinSLAMM.

The model performs continuous mass  balances for paniculate and dissolved pollutants and for runoff volumes.
Runoff is  calculated by a method developed by Pitt (1987) for small-storm hydrology. Runoff is based on rainfall
minus  initial abstraction,  and infiltration is  calculated for both impervious and pervious areas. Triangular
hydrographs, parameterized by a statistical approach, are used to simulate flow. Exponential buildup and washoff, as
well as wind removal functions, are used in computing runoff pollutant loadings. Water and sediment from various
source  areas are tracked as they are routed through treatment devices.  SLAMM is mostly used as a planning tool to
better understand sources of urban runoff pollutants and the effectiveness of their control.

SLAMM is capable of considering many stormwater controls (affecting source areas, drainage systems, and outfalls)
for a long series of rainfall events. The program considers how particulates filter or settle out in control devices.
Paniculate removal is calculated based on the structural design characteristics. Storage and overflow of devices are
also considered. At the outfall locations, the characteristics of the source areas are used to determine pollutant loads
in solid and dissolved phases. Another of its abilities is to accurately describe a drainage area in sufficient detail for
water quality  investigations but without requiring a great deal of superfluous information that field studies have
shown  to  be  of little  value in accurately predicting  discharge results.  SLAMM also applies stochastic analysis
procedures to more accurately represent actual uncertainty in model input parameters to better predict the  actual
range of outfall conditions (especially pollutant concentrations). Like all stormwater models, SLAMM needs to be
accurately calibrated and then tested (verified) as part of any local stormwater management effort.
                                                  325

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                                                                            Appendix A: Model Fact Sheets
Model Features
    •   Urban stormwater runoff and water quality empirical simulation model: initial abstraction, infiltration, and
        pollutant buildup and washoff
    •   Stormwater treatment devices (BMPs) simulation


Model Areas Supported
Watershed              Medium
Receiving Water         None
Ecological              None
Air                     None
Groundwater            None


Model Capabilities

Conceptual Basis
SLAMM represents the urban catchment by unconnected areas, connected areas, and drainage system. Unconnected
areas drain to  adjacent pervious areas before the runoff enters drainage system. Connected areas directly drain to
drainage system. The  drainage system consists of curbs, gutters, swale ditches, treatment devices, manholes, and
sewerage. SLAMM routes stormwater runoff and pollutants from unconnected source areas to the drainage system
directly, or to adjacent connected or pervious areas, which drain to the drainage system.


Scientific Detail
The  model performs continuous mass balances for paniculate and dissolved pollutants  and for runoff volumes.
Runoff is calculated by a method developed by Pitt (1987) for small-storm hydrology, which empirically determines
the initial losses and infiltration loss based on experiment data. Runoff is based on rainfall minus initial abstraction,
and infiltration is calculated for both impervious and pervious areas. Triangular hydrographs, parameterized by a
statistical approach, are used to simulate flow. Exponential buildup and washoff and wind removal functions, are
used in computing runoff pollutant loadings. The characteristics of the source areas are used to determine pollutant
loads in solid and dissolved phases based on an empirical method derived using available field observations. The
pollutant removal effectiveness of treatment devices are estimated, also based on empirical equations derived from
field data. SLAMM also applies stochastic analysis procedures to more accurately represent uncertainty in model
input parameters to better predict the  range  of outfall conditions (especially  pollutant concentrations). SLAMM
applies Monte Carlo sampling procedures to consider the uncertainties in model input values


Model Framework
    •   Urban areas (impervious, pervious)
    •   Stormwater treatment devices


Scale

Spatial Scale
    •   Site
    •   Catchment


Temporal Scale
    •   Variable timestep (hourly or sub-hourly)


Assumptions
    •   Triangular runoff hydrograph
    •   Exponential pollutant buildup and washoff
                                                  326

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                                                                          Appendix A: Model Fact Sheets
Model Strengths
    •   Better representation of small storms
    •   Treatment devices (BMPs) simulation capabilities
    •   Suitable for site-scale evaluation of urban runoff pollutants and the effectiveness of their control without
        requiring a great deal of information
    •   Uncertainty analysis capability


Model Limitations
    •   Does not have channel routing capability; limited use at the watershed scale
    •   Does not simulate base flow
    •   Is strongly based on a statistical approach that uses the current available field observations; is not a process-
        based model


Application History
SLAMM is  mostly  used as a planning  tool to better understand  sources of urban runoff pollutants and the
effectiveness of their control. Early users  of SLAMM include the Ontario Ministry of the Environment's Toronto
Area Watershed Management Strategy (TAWMS)  study  and the Wisconsin Department of Natural Resources'
Priority Watershed Program.


Model Evaluation
The SLAMM hydrology simulation component was verified by Pitt using field data from three sites in Wisconsin
and one site in Michigan.


Model Inputs
    •   Rainfall depth
    •   Site characteristics (area, land use type, surface condition, soil type, and infiltration rate)
    •   Drainage system characteristics (type of drainage system, density, underlying soil type, and infiltration
        rate)
    •   Treatment devices (type, size, outlet structure, underlying soil type, and infiltration rate; if applicable, street
        cleaning date and/or frequency, and wet pond natural seepage and evaporation rate)


Users' Guide
Available online: http://unix.eng.ua.edu/~rpitt/SLAMMDETPOND/WinSlamm/MainWrNSLAMM book.html


Technical Hardware/Software Requirements

Computer hardware:
    •   PC


Operating system:
    •   DOS and Windows


Programming language:
    •   VB
                                                 327

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                                                                       Appendix A: Model Fact Sheets
Runtime estimates:
    •   Seconds to minutes


Linkages Supported
The WinSLAMM-SWMM Interface Program has been developed to allow WinSLAMM to provide the runoff and
pollutant loads from input to SWMM TRANSPORT or EXTRAN blocks.


Related Systems
WinSLAMM


Sensitivity/Uncertainty/Calibration
SLAMM applies Monte Carlo sampling procedures to consider the uncertainties in model input values and enable
the model output to be expressed in probabilistic terms.


Model Interface Capabilities
    •   A Windows-based interface to facilitate data input
    •   Output is summarized in a series of user selectable tables


References
Pitt,  R., and J. Voorhees. 2000.  The Source Loading and Management Model (SLAMM), a  Water  Quality
Management Planning Model for Urban  Stormwater Runoff.  University of Alabama, Department of Civil and
Environmental Engineering, Tuscaloosa, AL.

Pitt, R. 1987. Small Storm Urban Flow and Particulate  Washoff Contributions to Outfall Discharges. Ph.D.  diss.,
University of Wisconsin, Madison, WI.

Pitt, R. 1993. Source Loading and Management Model (SLAMM). Presented at the National Conference on Urban
Runoff Management,  March 30-April 2. Chicago, IL.
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                                                                       Appendix A: Model Fact Sheets
    SPARROW: SPAtially Referenced Regression On Watershed Attributes


Contact Information
Richard Alexander
U.S. Geological Survey - NAWQA Nutrient Synthesis
413 National Center
12201 Sunrise Valley Drive
Reston, VA20192
(703) 648-6869
ralex@usgs.gov
http://water.usgs.gov/nawqa/sparrow/

Other Contacts:
NATIONAL SPARROW (NAWQA Nutrient Synthesis, Reston, VA)
Nolan, Jacquie          703-648-5709 (jnolan@usgs.gov)
Schwarz, Gregory       703-648-5718 (gschwarz@usgs.gov)
Smith, Richard          703-648-6870 (rsmithl@usgs.gov)

REGIONAL SPARROW
Chesapeake Bay (Maryland District)
Brakebill, John         410-238-4257 (jwbrakeb@usgs.gov)
Preston, Steve          410-267-9875 (spreston@usgs.gov)

New England (New Hampshire District)
Johnston, Craig         603-226-7843 (cmjohnst@usgs.gov)
Moore, Richard         603-226-7825 (rmoore@usgs.gov)
Robinson, Keith        603-226-7809 (kwrobins@usgs.gov)

North Carolina Coastal (North Carolina District)
McMahon, Gerard      919-571-4068 (gmcmahon@.usgs.gov)


Download Information
Availability: Nonproprietary
Cost: N/A


Model Overview/Abstract
SPARROW relates  in-stream water quality measurements to spatially referenced characteristics of watersheds,
including  contaminant sources and factors influencing terrestrial  and stream transport. The model empirically
estimates the origin and fate of contaminants  in streams and quantifies uncertainties in these estimates based on
model coefficient error and unexplained variability in the observed data.


Model Features
    •   Empirically based method
    •   Riverine pollutant loading rates prediction
    •   Contaminants modeled: sediment, nutrients, etc.
    •   Datasets used: Reach File (RF1 or version), USGS's National Land Cover Dataset (NLCD), STATSGO,
       and other spatial datasets
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                                                                            Appendix A: Model Fact Sheets
Model Areas Supported
Watershed              Medium
Receiving Water         Low
Ecological              None
Air                     Low (Model supports inclusion of atmospheric deposition loads)
Groundwater            None


Model Capabilities

Conceptual Basis
The  SPARROW model uses spatially referenced regressions of contaminant transport on watershed attributes to
support regional water quality assessment goals, including descriptions of spatial and temporal patterns in water
quality and identification of the factors and processes that influence those conditions. The method is designed to
reduce the problems of data interpretation caused by sparse sampling, network bias, and basin heterogeneity.


Scientific Detail
SPARROW uses statistical methods to  calibrate  a simple, structural  model of riverine water quality, one that
imposes  mass balance  in accounting for changes  in contaminant  flux. Regression equations  relate measured
transport rates in streams to spatially referenced descriptors of pollution sources and land surface and stream channel
characteristics. Spatial referencing of land-based and water-based variables is accomplished via superposition of a
set of contiguous land surface polygons on a digitized network of stream reaches that define surface water flow
paths for the region of interest. The primary spatial reference frame for the model is the RF1 reach network: all point
sources and landscape features are referenced to a particular RF1 reach.

Water quality measurements are obtained from monitoring stations located in a subset of the stream reaches. Water
quality predictors in the model are developed as a function of both reach and land surface attributes and include
quantities describing contaminant sources (point and nonpoint) as well as factors associated with rates of material
transport through the watershed  (such as soil permeability and stream velocity). Predictor formulae describe the
transport of contaminant mass from specific sources to the downstream end of a specific reach. Loss of contaminant
mass occurs during both overland and in-stream transport. The model can also take into account pollutant loads
contributed by atmospheric deposition.

SPARROW was first used to estimate the distribution of nutrients in streams and rivers of the U.S. and subsequently
shown to describe  land and stream processes affecting the delivery of nutrients (Smith, et al.,  1997;  Alexander, et
al., 2000; Preston and Brakebill 1999).


Model Framework
    •   Empirical, regression-based
    •   Uses national datasets, wide applicability


Scale

Spatial Scale
    •   Large watersheds


Temporal Scale
    •   Annual
    •   User-defined modeling period
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                                                                          Appendix A: Model Fact Sheets
Assumptions
The model is based on an empirical regression approach using mass balance calculations. Regression equations
relate measured transport rates in streams to spatially referenced descriptors of pollution sources and land surface
and stream channel characteristics.


Model Strengths
The model is capable of simulating a variety of pollutants at different spatial scales using national level datasets,
including RF1 (stream reach file),  NLCD (USGS land use/land cover), and  STATSGO (NRCS soils data). The
model can be used to model large- and small-scale systems with flexibility in the datasets and level of detail
incorporated. The model is readily available from USGS and has been applied in several case studies.


Model Limitations
The model is limited to broadly estimating pollutant loads and fate/transport characteristics. Stream processes and
model output are based on statistical relationships that were developed using national and regional water quality
datasets.


Application History
The model has been primarily used to estimate nutrient and sediment loads at various spatial scales. Refer to the
USGS SPARROW website for case studies.


Model Evaluation
Refer to USGS website - http://water.usgs.gov/nawqa/sparrow/


Model Inputs
    •   Initial conditions
    •   Time sequences of boundary conditions (inputs from watershed sources and discharges)
    •   Stream reach file reference (e.g., RF1)
    •   Physical coefficients
    •   Biological and chemical reaction rates
    •   Land use, soils, and other spatial datasets


Users' Guide
Not readily available on website. Website provides several journal articles and contacts:
http://water.usgs.gov/nawqa/sparrow/


Technical Hardware/Software Requirements

Computer hardware:
    •   PC


Operating system:
    •   PC-DOS


Programming language:
    •   SAS
                                                 331

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                                                                           Appendix A: Model Fact Sheets
Runtime estimates:
    •   Minutes


Linkages Supported
None


Related Systems
None


Sensitivity/Uncertainty/Calibration
In calibrating the model, measured rates of contaminant transport are regressed on predicted transport rates at the
locations of the monitoring stations, giving rise to a set  of estimated linear and nonlinear coefficients from the
predictor formulae.

Once calibrated, the model is used to estimate contaminant transport and concentration in all stream reaches. A
variety of regional characterizations of water quality conditions are then possible based on statistical summarization
of reach-level estimates. The application of bootstrap techniques allows estimation of the uncertainty  of model
coefficients and predictions.


Model Interface Capabilities
None


References
Refer to USGS website for complete list - http://water.usgs.gov/nawqa/sparrow/

Smith, R.A., G.E.  Schwarz, and R.B. Alexander. 1997. Regional Interpretation of Water-quality Monitoring Data.
Water Resources Research, 33(12): 2781-2798.

Alexander,  R.B., R.A. Smith, M.J. Focazio, and M.A. Horn. 1999. Source-Area Characteristics of Large Public
Surface-Water Supplies in the Conterminous United States: An Information Resource for Source-Water Assessment.
Open-File Report 99-248. U.S. Geological Survey, Reston,  VA.

Preston, S.D. and J.W. Brakebill. 1999. Application of Spatially Referenced Regression Modeling for the Evaluation
of Total  Nitrogen Loading in the Chesapeake Bay  Watershed. Report  99-4054. U.S. Geological Survey Water
Resources Investigations, Baltimore, MD.
                                                  332

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                                                                        Appendix A: Model Fact Sheets
               STORM: Storage, Treatment, Overflow, Runoff Model


Contact Information
Mainframe version:
U.S. Army Corps of Engineers
Hydrologic Engineering Center (HEC)
609 Second Street
Davis, CA 95616

PC Version (ProStorm):
Dodson & Associates, Inc.
5629 FM 1960 West, Suite 314
Houston, Texas 77069
1-800-235-8069 or 281-440-3787


Download Information
Availability: Nonproprietary
Cost: N/A

No downloads available.

Model Overview/Abstract
The STORM model was developed by Water Resources Engineers, Inc., in 1973 under a contract with the U.S.
Army Corps of Engineers' Hydrologic Engineering Center (HEC). STORM is designed to model urban watersheds
and is capable of calculating loads and concentrations of water quality parameters, such as suspended and settleable
solids, biochemical oxygen demand, total nitrogen, orthophosphate, and total coliform. STORM is also capable of
calculating land surface erosion. STORM is used to aid in sizing of storage and treatment facilities to control the
quantity and quality of stormwater runoff and land surface erosion. A continuous simulation model,  STORM
requires hourly precipitation data to model the seven stormwater elements,  such as  rainfall/snowmelt, runoff, dry
weather flow, pollutant accumulation and washoff, land surface erosion, treatment  rates, and detention  reservoir
storage. Dust and dirt and the associated pollutants are washed off from the watershed by the rainfall. The runoff is
routed to the treatment-storage facilities and the effect of treatment is calculated. Runoff in excess of treatment plant
capacity is  stored  and  treated later except for the quantity in excess of storage, which is waste untreated and
becomes overflow directly into the receiving waters.


Model Features
    •   Urban watershed model


Model Areas Supported
Watershed              High
Receiving Water        None
Ecological              None
Air                    None
Groundwater            None
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                                                                            Appendix A: Model Fact Sheets
Model Capabilities

Conceptual Basis
STORM is  a  quasi-dynamic model  that uses modified rational formula for hydrology simulation. Erosion is
simulated using USLE, and water quality is simulated by linear buildup and washoff coefficients.


Scientific Detail
The runoff of water is computed by one of three methods — coefficient method, the SCS Curve Number technique,
or a combination of the two.

The model computes a soil moisture balance at the beginning of each time increment by the following equation:
where  A = 0.7((SM -St_i)/SM)v

  B = ((SM-St_l)ISM}p
where, S is the soil moisture capacity for storage of water (in), IN is the maximum infiltration rate from initial
abstractions (in/hr), EVis the pan evaporation rate (in/hr), MP is the maximum soil percolation rate (in/hr), SIM is the
maximum soil moisture capacity for storage of water (in), t is the time, At is time increment (1 hr), v is the exponent
regulating evapotranspiration, and;? is the exponent regulating percolation.

Dry weather flow in the combined sewer systems is computed by specifying either the total waste water flow and
infiltration flow (mgd), domestic, commercial, industrial, and infiltration flow separately or the coefficients required
to compute the individual flows based on population and areas of commercial and industrial land.

The STORM model calculates the pollutant loadings based on either dust and dirt method or the daily pollutant
accumulation method. The dust and dirt method calculates pollutants as fractions of the dust and dirt for each land
use. The amount of the dust and dirt is calculated based on accumulation rate specified in terms of pounds per 100
feet of gutter length per day for each land use. The factors such as the intensity of rainfall, the rate of runoff, the
accumulation of dust and  dirt on the watershed, and the  frequency and efficiency of street sweeping  operations
affects the amount of pollutants entering the storm drains and the treatment facilities or the receiving waters.

Dry weather pollutant loading in the combined sewer systems is computed similarly to the flow calculation during
the  same period by specifying either the total waste water flow and infiltration flow (mgd), domestic, commercial,
industrial, and infiltration  flow  separately or the coefficients required to compute the individual flows based  on
population and areas of commercial and industrial land.


Model Framework
The model simulates runoff, erosion, and pollutant loading from urban watersheds, and routes through the treatment
storage facilities and discharges the excess runoff into receiving waters.


Scale

Spatial Scale
    •   Watershed scale


Temporal Scale
    •   Hourly
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                                                                     Appendix A: Model Fact Sheets
Assumptions
    •  Pollutants accumulated over the land between the consecutive rainfall events will be washed off during a
       rainfall event


Model Strengths
    •  Capable of calculating loads and concentration of many pollutants
    •  Simulates land surface erosion
    •  Can aid in sizing of storage and treatment facilities


Model Limitations
    •  Little flexibility in parameters to calibrate to observed hydrographs
    •  Requires a large amount of data


Application History
The STORM model was  extensively used in the late 1970s and early 1980s. The model was applied to the San
Francisco master drainage plan for abatement of combined sewer overflows.


Model Evaluation
To be determined


Model Inputs
    •  Runoff coefficients
    •  SCS parameters
    •  Hourly precipitation


Users' Guide
Available upon request from U.S. Army Corps of Engineers
Technical Hardware/Software Requirements

Computer hardware:
    •  PC and Mainframe
Operating system:
    •  Windows and Mainframe
Programming language:
    •  FORTRAN
Runtime estimates:
    •  Minutes
Linkages Supported
None
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                                                                       Appendix A: Model Fact Sheets
Related Systems
None


Sensitivity/Uncertainty/Calibration
Not available


Model Interface Capabilities
    •   Pro Storm


References
Donigian, A.S., Jr., and W. C. Huber. 1991. Modeling ofNonpoint Source Water Quality in Urban and Non-urban
Area. EPA/600/3-91/039. U.S. Environmental Protection Agency, Environmental Research Laboratory, Athens, GA.

U.S. Army Corps of Engineers, Hydrologic Engineering Center (USACE-HEC).  1977.  Storage,  Treatment,
Overflow,  Runoff Model,  STORM,  Generalised Computer  Program  723-58-L77520.  USACE-HEC. Davis,
California.

Shoemaker, L., M. Lahlou, M.  Bryer, D. Kumar,  and K. Kratt.  1997. Compendium of Tools for Watershed
Assessment and TMDL Development. EPA 841/B/97/006. U.S. Environmental Protection Agency, Office of Water,
Washington, D.C.
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                                                                         Appendix A: Model Fact Sheets
                        SWAT:  Soil and Water Assessment Tool


Contact Information
Jeff Arnold
Grassland, Soil & Water Research Laboratory
Agricultural Research Service
U.S. Department of Agriculture
808 East Blackland Road
Temple, Texas 76502
(254) 770-6502
http://www.brc.tamus.edu/swat/index.html


Download Information
Availability: Nonproprietary, http://www.brc.tamus.edu/swat/swat2000.html
Cost: N/A


Model Overview/Abstract
SWAT is a river basin, or watershed, scale model developed by Dr. Jeff Arnold for the USDA Agricultural Research
Service (ARS). SWAT was developed to predict the impact of land management practices on water, sediment, and
agricultural chemical yields in large complex watersheds with varying soils, land use, and management conditions
over long periods of time. The model is physically based and computationally efficient; it uses readily available
inputs and allows  users to study long-term impacts. SWAT is a continuous time model  (i.e., a long-term yield
model). The model is not designed to simulate detailed, single-event flood routing.


Model Features
    •   Watershed hydrology, sediment, and water quality model
    •   Pesticide fate and transport simulation
    •   Channel erosion simulation
    •   Rural and agricultural management  practices  including  detailed agricultural  land  planting, tillage,
       irrigation, fertilization, grazing, and harvesting procedures


Model Areas Supported
Watershed              High
Receiving Water         Medium
Ecological              Low
Air                    None
Groundwater            Low


Model Capabilities

Conceptual Basis
SWAT divides a watershed into subwatersheds. Each subwatershed is connected through a stream channel and
further divided in to Hydrologic Response Unit (HRU). HRU is a unique combination of a soil and a vegetation type
in a subwatershed, and SWAT simulates hydrology, vegetation growth, and management practices at the HRU level.
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                                                                           Appendix A: Model Fact Sheets
Water, nutrients, sediment, and other pollutants from each HRU are summarized in each subwatershed and then
routed through the stream network to the watershed outlet.


Scientific Detail
The following is a list of key processes and algorithms used in SWAT:

    •   Climate: Weather generator or user's input
    •   Hydrology: Canopy interception,  runoff (SCS  CN) infiltration (Green-Ampt),  and evapotranspiration
        (Penman-Monteith, Priestley-Taylor, or Hargreaves) flow
    •   Land cover/plant growth: Water and nutrient uptake, crop and plant growth database
    •   Erosion: MUSLE using peak runoff rate
    •   Nutrients: Nitrogen and phosphorus cycles
    •   Agricultural practices: Planting, tillage, irrigation,  fertilization, pesticide management,  grazing, and
        harvesting.  SWAT also has auto-fertilization and  auto-irrigation as management options that are useful for
        many agricultural areas
    •   For urban areas, SWAT employs buildup and washoff approach similar to approaches used in SWMM
    •   SWAT uses two methods to  simulate water routing in  stream network: Variable  storage routing method
        (flow continuity equation) and Muskingum routing method (wedge and prism storage)
    •   Sediment transport: Stream sediment transport power is related to the stream flow rate. Model calculates
        the maximum sediment  that  can be transported, compares the maximum sediment concentration to the
        actual sediment concentration,  and extra sediment is deposited.  If the actual sediment is less  than the
        maximum, settled sediment will be re-suspended and enter the water
    •   SWAT simulates in-stream biological and nutrient processes, including algal growth, death, and settling
        and oxygen in water, aeration and photosynthesis, and changes in water temperature
    •   Temporal and spatial scale: Daily; watershed or flexible size
    •   SWAT simulates sediment settling and mass balance, pesticide transport and fate (reservoirs only), nutrient
        (N and P) settling and lake chlorophyll a production (empirical) processes in ponds, wetlands, reservoirs,
        and potholes.


Model Framework
    •   Hydrologic response unit, subwatershed, and watershed
    •   Simple one-dimensional stream and well mixed reservoir/lake model


Scale

Spatial Scale
    •    ID, cell or subwatershed


Temporal Scale
    •   Daily


Assumptions
    •   SCS CN approach (Green-Ampt approach for infiltration was also implemented but requires hourly data)
        and MUSLE are appropriate for the area being modeled
    •   Flows in streams and reservoirs are one-dimensional


Model Strengths
    •   Physically based
    •   Great documentation
    •   Uses readily available inputs facilitated by the GIS interface (BASINS)
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                                                                         Appendix A: Model Fact Sheets
    •   Detailed crop growth model and databases
    •   Good land management modules and databases
    •   Suitable for study watersheds from small to very large sizes


Model Limitations
    •   Not for simulating sub-daily events such as a single storm event and diurnal changes of dissolved oxygen in
        a waterbody
    •   Only for simulating conservative metal species from the point source input
    •   Only route one pesticide each time through the stream network
    •   Cannot specify actual areas to apply fertilizers
    •   Assumes one-dimensional well mixed streams and reservoirs
    •   A large watershed can be divided into hundreds of HRUs resulting in many hundreds of input files, which
        are difficult to manage and modify without a solid interface
    •   The current version does not have a good model post-processor


Application  History
This model has been applied widely to study hydrology, nonpoint source pollution, and TMDLs since early 1990s.
See the reference list for details.


Model Evaluation
Many peer-review research papers have evaluated the model and model applications (see references)


Model Inputs
    •   Land uses (MRLC and others)
    •   Soil (STATSGO and others)
    •   Topography (30 x 30 m2 DEM or other resolutions)
    •   Subwatersheds (derived from manual or auto delineation tools in BASINS 3.0)
    •   Point source (PCS or other database)
    •   Climate data (daily temperature, precipitation, solar radiation, and wind speed)
    •   Crop and management databases
    •   USGS flow data (for calibration)
    •   Long-term watershed quality data (for model calibration)
    •   BASINS provides substantial input data and pre-processing to develop and run SWAT model


Users' Guide
The SWAT2000 Theoretical Documentation reviews all processes simulated with the model.
The SWAT2000 User's Manual provides definitions for all input variables.
Available online: http://www.brc.tamus.edu/swat/swatdoc.html


Technical Hardware/Software Requirements

Computer hardware:
    •   PC


Operating system:
    •   PC-DOS, Microsoft Windows
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                                                                          Appendix A: Model Fact Sheets
Programming language:
    •   FORTRAN (model) and Arc View Avenue (interface)


Runtime estimates:
    •   Minutes to less than an hour


Linkages Supported
BASINS


Related Systems
SWAT incorporates features of several ARS models and is a direct outgrowth of the SWRRB model (Simulator for
Water Resources in Rural Basins). Specific models that contributed significantly to the development of SWAT were
CREAMS (Chemicals,  Runoff, and Erosion from Agricultural Management Systems),  GLEAMS (Groundwater
Loading Effects on Agricultural Management Systems), and EPIC 4 (Erosion-Productivity Impact Calculator).


Sensitivity/Uncertainty/Calibration
The calibration tool in the BASINS 3.0 interface  allows  basic model calibration and sensitivity analysis (27 key
parameters). No tools were developed for uncertainty analysis.


Model Interface Capabilities
    •   Non-GIS DOS  interface (Util)
    •   Arc View interface—AVSWAT
    •   BASINS 3.0 Arc View GIS interface (includes  input editing and output viewing utilities and a simple
        calibration tool)


References
Neitsch S.L.,  J.G. Arnold, J.R. Kiniry,  and J.R. Williams. 2001. Soil and Water Assessment Tool  User's Manual,
Version  2000.  U.S.   Department   of   Agriculture,  Agricultural   Research   Service,    Temple,   TX.
.

Arnold, J.G.,  R. Srinivasan, R.S. Muttiah, P.M. Allen and C. Walker.  1999. Continental scale simulation of the
hydrologic balance. Journal of the American Water Resources Association. 35(5):1037-1052.

Arnold, J.G., R. Srinivasan, R.S. Muttiah, and J.R.  Williams. 1998. Large area hydrologic modeling and assessment
Parti: Model development. Journal of American Water Resources Association. 34(l):73-89.

Arnold, J.G.,  J.R. Williams, and D.A. Maidment.  1995. A continuous time water and sediment routing model for
large basins. Journal of Hydraulic Engineering, American  Society of Civil Engineers. 121 (2): 171 -183.

Bingner,  R.L., J. Garbrecht, J.G. Arnold, and R.  Srinivasan.  1997. Effect of watershed  subdivision on simulated
runoff and fine sediment yield. Transactions of the American Society of Agricultural Engineers. 40(5): 1329-1335.

Deliman, Patrick N. et al., 1999. Review of Watershed Water Quality Models. Technical Report W-99-1. U.S. Army
Corps of Engineers.

DiLuzio, M., R. Srinivasan, and J.G. Arnold. 2002. Integration of watershed tools and SWAT model into BASINS.
Journal of American Water Resources Association.  38(4):1127-1141.

Engel, B.A., R.  Srinivasan, J.G. Arnold, C. Rewerts, and S.J. Brown. 1993.  Nonpoint source  (NFS)  pollution
modeling using models integrated with Geographic Information Systems (GIS). Water Science Technology. 28: 685-
690.
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                                                                            Appendix A: Model Fact Sheets
Fontaine, T.A., T.S.  Cruickshank, J.G. Arnold and R.H. Hotchkiss. 2002. Development of a snowfall-snowmelt
routine for mountainous terrain for the  Soil Water Assessment Tool (SWAT). Journal of Hydrology. 262 (1-4):209-
223.

King, K.W., J.G. Arnold,  and R.L. Bingner. 1999. Comparison of Green-Ampt and Curve Number methods on
Goodwin Creek Watershed using SWAT. Transactions of the American Society of Agricultural Engineers.
42(4):919-925.

Kirsh, K., A. Kirsh, and J.G. Arnold. 2002. Predicting sediment and phosphorus loads in the Rock River Basin using
SWAT. Transactions of the American Society of Agricultural Engineers. 45(6): 1757-1769.

Manguerra, H.B., and B.A. Engel. 1998. Hydrologic parameterization of watersheds for runoff prediction using
SWAT. Journal of the American Water Resources Association. 34(5): 1149-1162.

Peterson, J.R.  and J.M. Hamlet. 1998. Hydrologic  calibration of the SWAT model in a watershed containing
fragipan soils. Journal of American Water Resources Association. 34(3): 531-544.

Saleh, A., J.G. Arnold,  P.W. Gassman, L.W. Hauck, W.D. Rosenthal, J.R. Williams, and A.M.S. McFarland. 2000.
Application of SWAT for the Upper North Bosque Watershed. Transactions of the American Society of Agricultural
Engineers. 43(5): 1077-1087.

Santhi, C., J.G.  Arnold, J.R. Williams, W.A. Dugas, and L. Hauck. 2001. Validation of the SWAT model on a large
river basin with point and nonpoint sources. Journal of American Water Resources Association. 37(5): 1169-1188.

Santhi,  C.,  J.G. Arnold, J.R. Williams, W.A. Dugas, and L. Hauck.  2002.  Application of a watershed model to
evaluate management effects  on point and nonpoint source pollution. Transactions of the American Society of
Agricultural Engineers. 44(6): 1559-1570.

Spruill, C. A., S.R. Workman, and J.L.  Taraba. 2000.  Simulation of daily and monthly stream discharge from small
watersheds using the SWAT model. Transactions of the American Society of Agricultural Engineers. 43 (6): 1431-
1439.

Srinivasan, R. and J.G. Arnold. 1994. Integration of a basin-scale water quality model with GIS. Water Resources
Bulletin. (30)3:453-462.

Srinivasan, R.S., J.G. Arnold, and C.A. Jones.  1998. Hydrologic modeling of the United States with the  soil and
water assessment tool. Water Resources Development. 14(3):315-325.

Srinivasan, R.,  T.S. Ramanarayanan, J.G. Arnold, and S.T,  Bednarz. 1998. Large area hydrologic modeling and
assessment Part II: Model Application. Journal of American Water Resources Association. 34(1):91-101.

Van L., M.W. and J. Garbrecht. 2003. Hydrologic simulation of the little Washita River  Experimental Watershed
using SWAT. Journal of American Water Resources Association. 39(2):413-426.

Ward, G. H., Jr. and  J.  Benaman. 1999. Models for TMDL Application in Texas Watercourses: Screen and Model
Review. Report CRWR-99-7. Center for Research in Water Resources, University of Texas, Austin.
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                                                                          Appendix A: Model Fact Sheets
                       SWMM: Storm Water Management Model


Contact Information
SWMM 4.4 and previous versions:
Wayne C. Huber
Oregon State University
Dept. of Civil, Construction, and Environmental Engineering
202 Apperson Hall
Corvallis, Oregon 97331-2302
(541)737-4934
wayne.huber(@,orst.edu

SWMM version 5:
Lewis Rossman
U.S Environmental Protection Agency
Office of Research and Development
Water Supply and Water Resources Division
26 West Martin Luther King Drive
Cincinnati, OH 45268
(513)569-7603
rossman. lewis(g),epa. gov


Download Information
Availability: Nonproprietary
SWMM 4.4: http://ccee.oregonstate.edu/swmm
SWMM 5 (available for beta testing): http://www.epa.gov/ednnrmrl/swmm/index.htm
Cost: N/A


Model Overview/Abstract

SWMM is a dynamic rainfall-runoff simulation model developed by EPA. It is applied primarily to urban areas and
for single-event or long-term (continuous) simulation using various timesteps (Huber and Dickinson, 1988). It was
developed for the analysis of surface runoff and flow routing through complex urban  sewer systems. The latest
official version of SWMM is 4.4h, which is recommended for all users. EPA SWMM5 is a completely revised and
updated release  of SWMM. The first beta test version SWMM5  was released in June 2003. However, SWMM5 is
still  under development, with additional functions being incorporated and released over time.  In  SWMM, flow
routing is performed for surface and sub-surface conveyance and groundwater systems, including  the options of
nonlinear reservoir channel routing and fully  dynamic hydraulic  flow routing. In the fully dynamic  hydraulic flow
routing option, SWMM simulates backwater, surcharging, pressure flow, and looped connections.  SWMM has a
variety of options for quality simulation,  including traditional buildup and washoff formulation as well  as rating
curves and regression techniques. Universal Soil Loss Equation (USLE) is included to simulate soil erosion. SWMM
incorporates first order decay and particle settling mechanism in pollutant transport  simulations and includes an
option of simple scour-deposition routine. Storage, treatment, and other BMPs can also be simulated.


Model Features
    •   Watershed hydrology and water quality
    •   Stream/conduit transport
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                                                                           Appendix A: Model Fact Sheets
    •   Urban stormwater and sewage systems


Model Areas Supported
Watershed               High
Receiving Water         Medium
Ecological               None
Air                     None
Groundwater            Low


Model Capabilities

Conceptual Basis
The basic spatial unit for SWMM is the subcatchment into which the modeled watershed is subdivided. Multiple
small subwatersheds and representative streams may be networked together to represent a larger watershed drainage
area.


Scientific Detail
Infiltration is calculated using the Horton or Green-Ampt methods, at the user's choice.  A version of Manning's
equation is used to estimate flow rate from the subcatchment area based on a conceptual model of the subcatchment
as a  "nonlinear reservoir." The  lumped storage scheme is applied for soil/groundwater modeling. For impervious
areas, a linear formulation is used to compute daily/hourly increases in particle accumulation. For pervious areas, a
modified USLE determines sediment load. The concept of potency factors is applied to simulate pollutants other
than sediment.

The  Transport block has kinematic wave  routing of flow and quality, base flow generation, and  infiltration
capabilities and it routes flow through user-defined system ranges from natural channel to  concrete  pipes. The
EXTRAN block carries out a numerical solution of the complete St. Venant equations for urban drainageways and
conduits, by modeling the network as a link-node system. SWMM can be directly interfaced with EPA's WASP
receiving water quality model.


Model Framework
    •   Subwatersheds and watershed
    •   Channel/pipe network
    •   One-dimensional flow and pollutant routing


Scale

Spatial Scale
    •   Subwatershed of flexible size


Temporal Scale
    •   User-defined timestep, typically minutes to hourly


Assumptions
    •   The model  performs best in urbanized areas with impervious drainage, although it has been widely used
        elsewhere.
    •   Model parameters for quantity and quality simulations are developed such that the model will be calibrated
        to enhance its capability.
    •   Water table elevation is assumed to be fixed.
    •   All  the pollutants entering the waterbodies are sediment adsorbed.
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                                                                           Appendix A: Model Fact Sheets
Model Strengths
    •   Fully dynamic hydraulic routing
    •   Hydraulic structure (manhole, weir, orifice, etc.) simulation
    •   Overland flow routing between pervious and impervious areas within a subcatchment (latest version)
    •   Various options  for  quality  simulation,  including buildup and washoff,  rating curves, and regression
        techniques


Model Limitations
    •   Only considers settling and first-order decay in in-stream pollutant routing and transformation
    •   Weak groundwater simulation capability


Application History
SWMM has been applied to urban  hydrologic quantity/quality problems in  scores of U.S. cities as well as
extensively in Canada, Europe, and Australia (Donigian and Huber,  1991; Huber, 1992). The model  has been used
for very complex hydraulic analysis  for combined sewer overflow mitigation, as well as  for many stormwater
management planning studies and pollution abatement projects  (Huber,  1992). Warwick  and Tadepalli (1991)
describe calibration and  verification of SWMM  on a 10-square-mile urbanized  watershed in Dallas, Texas.
Tsihrintzis, et al.,  (1995) describe SWMM applications to  four watersheds  in South Florida representing high- and
low-density residential, commercial, and highway land uses.


Model Evaluation
The applications are primarily limited to urban areas.


Model Inputs
    •   Data requirements for hydrologic  simulation include area,  imperviousness, slope, roughness, width,
        depression storage, and infiltration parameters. Land use data are used to determine  ground  cover type for
        each model subarea.
    •   Depending  on what options are set for the loading calculations, additional parameters are necessary (e.g.,
        buildup coefficients would be needed for the dry weather buildup simulation).
    •   Additional data are necessary if the user intends to model subsurface drainage and interflow.
    •   Depending on the stormwater system, dimensions, slope, roughness coefficients, elevations, and storage are
        required.
    •   Continuous records of evapotranspiration, temperature, and solar intensity are required.


Users' Guide
    •   Huber, W.C.  and R.E. Dickinson.  1988 Storm  Water Management Model  User's Manual,  Version 4.
        EPA/600/3-88/001a  (NTIS  PB88-236641/AS).  U.S.  Environmental Protection Agency,  Athens,  GA,
        pp.595
    •   Roesner,  L.A., J.A. Aldrich and R.E. Dickinson.  1988. Storm  Water Management Model User's Manual,
        Version 4:  Addendum I,  EXTRAN. EPA/600/3-88/00Ib (NTIS  PB88236658/AS). U.S. Environmental
        Protection Agency, Athens, GA. pp.203
    •   A revised  and  more readable  User's  Guide  from William  James at  CHI can be  purchased at
        http://www.computationalhvdraulics.com/Publications/Books/r219.html
    Cost: $85
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                                                                       Appendix A: Model Fact Sheets
Technical Hardware/Software Requirements

Computer hardware:
    •   PC


Operating system:
    •   DOS and Windows


Programming language:
    •   FORTRAN (v4.4 and previous versions)
    •   C (v5)


Runtime estimates:
    •   Minutes


Linkages Supported
    •   SWMM can directly be interfaced with EPA's WASP receiving water quality model.


Related Systems
PCSWMM, XP-SWMM, MIKE-SWMM


Sensitivity/Uncertainty/Calibration
SWMM 4.4  includes a STATISTICS module, which performs simple statistical analyses on both quantity and
quality parameters.


Model Interface Capabilities
    •   SWMM 5 includes a Graphical User Interface for input data preparation and output data display


References
Donigian, A.S., Jr., and W.C. Huber.  1991. Modeling ofNonpoint Source Water Quality in Urban and Non-urban
Areas. EPA/600/3-91/039. U.S. Environmental Protection Agency, Environmental Research Laboratory, Athens,
GA.

Huber, W. C. 1992. Experience with the U.S. EPA SWMM Model for Analysis and Solution of Urban Drainage
Problems. In Proceedings, Inundaciones YRedes De Drenaje Urbano, ed. J. Dolz, M. Gomez, and J. P. Martin, eds.,
Colegio de Ingenieros de Caminos, Canales Y Puertos. Universitat Politecnica de Catalunya. Barcelona, Spain, pp.
199-220.

Huber, W.C. 2001. New  Options for Overland Flow Routing in SWMM. American Society of Civil Engineers-
Environmental and Water Resources Institute, World Water and Environmental Congress, Orlando, FL.

Huber, W.C., and R.E. Dickinson. 1988. Storm Water Management Model Version 4, User's Manual. EPA 600/ 3-
88/ 00la (NTIS PB88-236641/ AS). U.S. Environmental Protection Agency, Athens, GA.

Irvine, K.N., E.G. Loganathan, E.J. Pratt and H.C. Sikka. 1993. Calibration of PCSWMM to estimate metals, PCBs
and HCB in CSOs from an industrial sewershed. In W. James, ed. New Techniques for Modeling the Management of
Stormwater Quality Impacts. Lewis Publishers, Boca Raton, FL. pp.  215-242.
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                                                                           Appendix A: Model Fact Sheets
James, W., W. C. Huber, R. E. Pitt, R. E. Dickinson, and R. C. James. 2002. Water Systems Models [1]: Hydrology,
User's guide to SWMM4 RUNOFF and Supporting Modules and to PCSWMM. Version 2.4.  Computational
Hydraulics International, Guelph, Ontario, Canada, pp. 311.

James, W., W. C. Huber, R. E. Pitt,  R. E. Dickinson, L. A. Roesner, J. A. Aldrich, and R. C. James. 2002  Water
Systems Models [2]: Hydraulics, User's guide to SWMM4 TRANSPORT, EXTRAN and STORAGE Modules and to
PCSWMM. Version 2.4. Computational Hydraulics International. Guelph, Ontario, Canada, pp. 359.

Tshihrintzis, V. A., R. Hamid, and H. R. Fuentes. 1995.  Calibration and verification of watershed quality model
SWMM in sub-tropical  urban areas. In Proceedings of the First International Conference -  Water Resources
Engineering. American Society of Civil Engineers, San Antonio, TX. pp 373-377.

Tsihrintzis, V. and R. Hamid. 1998. Runoff Quality Prediction from Small  Urban  Catchments using SWMM.
Hydrological Processes,  12 (2):311-329.

Warwick,  J. J., and P. Tadepalli. 1991. Efficacy of SWMM application. Journal of Water Resources Planning and
Management 117(3):352-366.
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                                                                         Appendix A: Model Fact Sheets
                                  TMDL Modeling Toolbox


Contact Information
Tim Wool
U.S. Environmental Protection Agency
Office of Research and Development
National Exposure Research Laboratory
Ecosystems Research Division
Watershed and Water Quality Modeling Technical Support Center
960 College Station Road
Athens, GA 30605-2700
(706)355-8312
wool.tim(@,epa. gov
http://www.epa.gov/athens/wwqtsc


Download Information
Availability: Nonproprietary, http://www.epa.gov/athens/wwqtsc/index.html
Cost: N/A


Model Overview/Abstract
The TMDL Modeling Toolbox is a collection of models, modeling tools, and databases that have been utilized over
the past decade  in the development of Total Maximum Daily Loads (TMDLs). The Toolbox takes these proven
technologies and provides the capability  to more readily  apply the models, analyze the results,  and integrate
watershed loading models with receiving water applications. The design of the Toolbox is such that each of the
models is a stand-alone application. The toolbox provides an exchange of information between the models through
common linkages. Because of the modular design of the Toolbox, additional models can be added easily to integrate
with the other tools. In addition, the Toolbox provides the capability to visualize model results, a linkage to GIS and
non-geographic  databases (including monitoring  data  for calibration), and the functionality to  perform data
assessments.


Model Features
The Toolbox allows for the stead state dynamic simulation of mass transport and water quality processes in all types
of surface water environments, including overland flow, small creeks, rivers,  lakes, estuaries, coastal embayments,
and offshore areas.


Model Areas Supported
Watershed              High
Receiving Water        High
Ecological              None
Air                    Medium
Groundwater            Medium
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                                                                         Appendix A: Model Fact Sheets
Model Capabilities

Conceptual Basis
The Toolbox is designed to address a broad range of waterbody types and pollutants. EPA actively supports the
components of the TMDL Modeling Toolbox. EPA is committed to enhancing and improving components of the
Toolbox to  meet  the  technical demands of the TMDL  program and watershed protection. This will  ensure
defensibility  when TMDLs are faced with legal challenges. Additionally,  knowledge gained through the TMDL
development experience and modeling with the Toolbox in one region of the  country can be distributed readily
throughout the others regions.


Scientific Detail
The Toolbox contains assessment tools, watershed models, and receiving water models including the following:

Assessment Tools: (http://wcs.tetratech-ffx.com')
    •   Water Resources Database (WRDB)
    •   Watershed Characterization System (WCS)
    •   WCS Sediment Tool
    •   WCS Mercury Tool
    •   WCS LSPC Tool

Watershed Models:
    •   Loading Simulation Program in C++ (LSPC)
    •   Watershed Assessment Model (WAMView)
    •   Storm Water Management Model (SWMM)

Receiving Water Models:
    •   A Dynamic One-Dimensional Model of Hydrodynamics and Water Quality (EPDRivl)
    •   Stream Water Quality Model (QUAL2K)
    •   CONservational Channel Evolution and Pollutant Transport System (CONCEPTS)
    •   Environmental Fluid Dynamics Code (EFDC)
    •   Water Quality  Analysis Simulation Program (WASP)


Model Framework
    •   Watershed hydrologic, sediment, and water quality
    •   Time series overland, subsurface, and in-stream simulation


Scale

Spatial Scale
    •   Watershed or Flexible size
    •   Lumped parameters at a land use-subwatershed basis


Temporal Scale
    •   Variety of timesteps, including hourly or daily depending on the model.


Assumptions
Each  model and  modeling tool  in the  TMDL Modeling Toolbox has its own assumptions based on  the
physical/chemical processes modeled.
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Model Strengths
    •   Has standardized tools and models used by EPA, states, and consultants.
    •   Includes models with proven track records.
    •   Provides an exchange of information between the models through common linkages.
    •   Includes a flexible design for adding new models to integrate with the existing tools.
    •   Is in the public domain.


Model Limitations
    •   Requires a high level of expertise for each application.
    •   Each model and modeling tool has own limitation.


Application History
The  Toolbox models  and databases have been used both independently  and collectively to develop defensible
TMDLs for a wide array of issues including pathogens, sediment, nutrients, dissolved oxygen, metals, temperature,
and toxicants. The WCS Sediment Tool has been applied to sediment-impaired waters throughout the southeast.
Mercury TMDLs were developed in Georgia using a combination of the WCS Mercury Tool and WASP. LSPC has
been used in Alabama for pathogen  TMDLs; Georgia, Tennessee, Kentucky, and  Alabama for nutrient and/or
dissolved oxygen TMDLs; and Alabama, West Virginia, and Arizona for metals TMDLs. EFDC has been used
widely throughout  the  country to support  TMDL  development—Washington,  California, Oklahoma,  Florida,
Mississippi, Alabama, North Carolina, West Virginia, Delaware, Pennsylvania, and Massachusetts.


Model Evaluation
Toolbox model linkages have been successful in a number of situations, most notably for TMDL development using
EFDC and WASP in the Neuse Estuary, North Carolina; Cape Fear River,  North Carolina; and Fenholloway River
Estuary, Florida; and TMDL development using LSPC, EFDC, and WASP for Mobile Bay, Alabama; Flint Creek,
Alabama; Coosa Lakes, Alabama; Lake Allatoona, Georgia; and Alabama River, Alabama.


Model Inputs
The Toolbox provides an exchange of information between the models through common linkages. Each model has
its own specific input data requirement. In general, model inputs include

    •   Continuous meteorological time series records
    •   Soils data (auxiliary dataset to guide hydrologic calibration)
    •   Pollutant buildup and washoff
    •   Stream dimensions or rating curves
    •   Point source loading inputs
    •   A large number of specified calibration parameters


Users' Guide
Documentation is available online at http://www.epa.gov/athens/wwqtsc


Technical Hardware/Software Requirements

Computer hardware:
    •   IBM Compatible PC (Pentium III or higher recommended, but not required)


Operating system:
    •   Microsoft Windows 98/NT/2000/XP
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Programming language:
    •   Different tools use different programming platforms


Runtime estimates:
    •   Minutes to less than an hour and daily depending on the model.


Linkages Supported
    •   Loading Simulation Program in C++ (LSPC)
    •   Watershed Assessment Model (WAMView)
    •   Storm Water Management Model (SWMM)
    •   A Dynamic One-Dimensional Model of Hydrodynamics and Water Quality (EPDRivl)
    •   Stream Water Quality Model (QUAL2K)
    •   CONservational Channel Evolution and Pollutant Transport System (CONCEPTS)
    •   Environmental Fluid Dynamics Code (EFDC)
    •   Water Quality Analysis Simulation Program (WASP)


Related Systems
The TMDL Modeling Toolbox supports several numerical models as listed in the Linkage Supported section.


Sensitivity/Uncertainty/Calibration
The TMDL Modeling Toolbox supports several numerical models such as LSPC, which includes a data analysis
component that may be used to  quickly compare model output against observed data in time series form, as monthly
summaries, or on a one-to-one graph. LSPC model output is specially tailored for spreadsheet use; consequently,
many users  prefer to  develop independent spreadsheet  analysis,  summarization,  calibration,  and plotting
applications, which are readily linked to LSPC model output.


Model Interface Capabilities
The Model Visualization Enhancement Module (MOVEM), a graphical post processor, provides an efficient method
for reviewing model predictions and comparing them with field  data for calibration. MOVEM has  the ability to
display results from all of the WASP models as well as EFDC, DYNHYD,  and EPD-RIV1. MOVEM allows the
modeler to displays the results in two graphical formats:

    •   Spatial Grid - a two dimensional rendition of the model network is displayed in a window where the model
        network is color shaded based upon the predicted concentration.
    •   x/y Plots - generates an x/y line plot of predicted and/or observed model results in a window.

There is no limit on the number of x/y plots, spatial grids, or even model result files the user can utilize in a session.
Separate windows are created for each spatial grid or x/y plot created by the user.


References
Tetra Tech, Inc. and U.S. Environmental Protection Agency  (USEPA). 2002. The Loading Simulation Program in
C++ (LSPC)  Watershed Modeling System—Users' Manual.

WAMView User's Manual. Soil and Water Engineering Technology, Inc.

Wool, T.A, R.B. Ambrose,  J.L. Martin, and E.A.  Comer. Water Quality Analysis  Simulation  Program (WASP)
Version 6.0 Draft: User's Manual.
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                                         TOPMODEL


Contact Information
Keith Beven
Department of Environmental Science
Institute of Environmental and Natural Sciences
Lancaster University
Lancaster LAI 4YQ
United Kingdom
+44 (0)1524 593892
K.Beven@lancaster.ac.uk
http://www.es.lancs.ac.uk/hfdg/TOPMODEL.html


Download Information
Availability: Nonproprietary, (http://www.es.lancs.ac.uk/hfdg/TOPMODEL.html')
Cost: None for non-commercial uses.

Contact the author for other uses.


Model Overview/Abstract
TOPMODEL  is  a  physically  based,  distributed watershed model that simulates hydrologic  fluxes of water
(infiltration-excess  overland  flow,  saturation  overland  flow,  infiltration,  exfiltration,  subsurface flow,
evapotranspiration, and channel routing) through a watershed. The model simulates explicit groundwater/surface-
water interactions by predicting the movement of the water table, which determines where saturated land-surface
areas develop  and have the potential to produce saturation overland flow.


Model Features
    •   Rainfall-runoff modeling in single or multiple subwatersheds.
    •   The Windows version of the model allows Monte Carlo runs with parameter sets chosen from specified
        parameter ranges.
    •   The Windows version of the model displays simulated hydrograph time  series—the topographic index
        derived from the elevation data—and map of saturated area in a watershed.


Model Areas Supported
Watershed              Medium
Receiving Water         Low
Ecological              None
Air                    None
Groundwater            Medium


Model Capabilities

Conceptual Basis
TOPMODEL  is a rainfall-runoff model that bases its distributed predictions on an analysis of watershed topography.
The model predicts saturation excess and infiltration excess surface runoff and subsurface stormflow. Since the first
article was published about the model in 1979 (Beven and Kirkby, 1979) there have been many different versions.
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The idea has always been that the model should be simple enough to be modified by the user so that the predictions
conform as far as possible to the user's perceptions of how a watershed works.


Scientific Detail
TOPMODEL is defined as a variable contributing area conceptual model in which the dynamics of surface and
subsurface saturated areas is estimated on the basis of storage discharge relationships established from a simplified
steady state theory for downslope saturated zone flows. The theory assumes that the local hydraulic gradient is equal
to the local surface slope and implies that all points with the same value of the topographic  index, a/tan B will
respond in a hydrologically  similar way. This index is derived from the basin topography, where  a is the drained
area per unit contour length and tan B is the slope of the ground surface at the location.  Thus the model need make
calculations only for representative values of the index.  The results  may then be mapped back into  space by
knowledge of the pattern of the index derived from a topographic analysis.

The soil profile is  defined by a set of stores. The  upper one is the root zone storage, where rainfall infiltrates until
the field capacity is reached. When forest canopies appear, an additional interception and surface storage may be
necessary. In this store, evapotranspiration is assumed to take place at the potential rate to decrease at a linear rate
when the root zone becomes  depleted.

Once  the  field  capacity is exceeded, a second store starts filling until the water content reaches saturation.  The
gravity drainage store links the unsaturated and saturated zones, according to a linear function that includes a time
delay parameter for vertical routing through the unsaturated zone.  An alternative approach based on the Darcian flux
at the base of the unsaturated zone may be considered.

When the deficit in the gravity drainage store or the water table depth equals 0 the saturation condition is reached
and the rainfall produces direct  surface runoff. Hence the main goal of TOPMODEL is the  computation  of the
storage deficit or the water table depth at any location for every timestep. The theory relates mean watershed storage
deficit to local storage deficits using the local value of a function of the topographic index. In the original version of
TOPMODEL the soil hydraulic conductivity, or by extension the  soil transmissivity, is assumed to decay following
a negative exponential law.  In this case,  the expression that estimates the value of the  local storage deficit or the
water table depth is given in terms of the topographic index ln(a/tan B). Other forms of soil hydraulic conductivity
decay functions lead to different index functions.  When distributed values of soil transmissivity (TO) are  known a
soil-topographic index may be considered, ln(a/TO tan B).

The topographic index  derivation was obtained by manual analysis of contour maps and hillslope streamtubes in the
early  versions of the model.  The  current version of the model provides a program to derive its distribution from a
regular raster grid  of elevations for any watershed or subwatershed using the multiple direction flow algorithm and
the channel initiation threshold for positioning river headwaters.

To  compute runoff according to  the infiltration excess mechanism TOPMODEL uses the exponential Green-Ampt
model. If infiltration excess does occur it does so over the whole area of the subwatershed (although alternatively a
statistical distribution  of hydraulic  conductivity values  in  the watershed can be assumed). A parameter for
controlling the fraction of watershed area that generates runoff by infiltration excess was considered recently by a
few studies to compute runoff using the Philip' two term-equation.

Subwatershed discharges are routed to the watershed outlet using a linear routing algorithm with constant velocity
both in the main channel and in the internal subwatershed.


Model Framework
    •   Watershed and subwatersheds
    •   Watershed surface are divided into surface zone, root zone, and saturated zone.
    •   Channel networks
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Scale

Spatial Scale
    •   Grid or subwatersheds


Temporal Scale
    •   Variable, from 1 to 24 hours


Assumptions
    •   The hydraulic gradient of subsurface flow is equal to the land-surface slope.
    •   The actual lateral discharge is proportional to the specific watershed area (drainage area per unit length of
        contour line).
    •   The redistribution of water within the subsurface can be approximated by a series of consecutive steady
        states.
    •   The soil profile at each point has a finite capacity to transport water laterally downslope.


Model Strengths
    •   It is a simple distributed watershed model and results can be visualized in a spatial context.
    •   It requires few watershed parameters and low level of expertise.
    •   It has been studied extensively.
    •   The model code is available for modification.


Model Limitations
    •   TOPMODEL  only simulates watershed hydrology, although studies have been conducted to modify it to
        simulate water quality dynamics.
    •   TOPMODEL  can be applied most accurately to watersheds that do not suffer from excessively long dry
        periods and have shallow homogeneous soils and moderate topography.
    •   Model results  are sensitive to grid size, and grid size <=50 m is recommended.


Application History
TOPMODEL has a long history of application. See an extensive list of publications at
http://www.es.lancs.ac.uk/hfdg/TOPMODEL/new-bibliog.html.


Model Evaluation
The model has been validated with rainfall-discharge data (e.g. Beven et al. 1984, Hornberger et al. 1985, Robson et
al. 1993, Obled et al.  1994,  Wolock 1995)  and  several studies  have  examined its applicability to water quality
problems (Wolock et al. 1990, Robson etal. 1992).


Model Inputs
    •   Project file: Text description of application and input file  names and paths.
    •   Catchment (watershed) data file: Watershed and sub watershed topographic index—In(a/tan5) distributions
        and the following parameters:
            o   The mean soil surface transmissivity
            o   A transmissivity profile decay coefficient
            o   A root zone storage capacity
            o   An unsaturated zone time delay
            o   A main channel routing velocity and internal subwatershed routing velocity
    To use the infiltration excess mechanism, a hydraulic conductivity  (or distribution), a wetting front suction and
    the initial near surface water content should be added.
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    The initialization of each run requires an initial stream discharge and the root zone deficit.
    •   Hydrological input data file: rainfall, potential evapotranspiration, and observed discharge time series in
        m/h
    •   Topographic index map data file: the topographic  index  map may be prepared from a raster digital
        elevation file using the DTM-ANALYSIS program.  This file includes number of pixels in X direction,
        number of pixels in Y direction, grid size, and topographic index values for each pair of X and Y.


Users' Guide
Available online: http://www.es.lanes.ac.uk/hfdg/TOPMODEL.html


Technical Hardware/Software Requirements

Computer hardware:
    •   PC


Operating system:
    •   PC-DOS, PC-WINDOWS


Programming language:
    •   FORTRAN, Visual Basic


Runtime estimates:
    •   Minutes


Linkages Supported
Links to  GLUE  (Generalized Likelihood Uncertainty Estimation) program for sensitivity/uncertainty/calibration
analyses.


Related Systems
TOPMODEL is integrated in GRASS GIS version 5. TOPSIMPL, another Windows version of the model written by
Georges-Marie Saulnier can be downloaded directly from the main TOPMODEL site
http://www.es.lancs.ac.uk/hfdg/TOPMODEL.html.


Sensitivity/Uncertainty/Calibration
The Windows version of TOPMODEL allows the sensitivity analysis of the objective functions to changes of one or
more of the parameters to be explored. An initial run of the model is made with the current values of the parameters.
Then each chosen parameter  is varied across its range, keeping the values of the other parameters constant. The
results are displayed as graphs.

TOPMODEL's Monte-Carlo simulation output can be  exported for further sensitivity and uncertainty analyses on
the model results using the GLUE (Generalized Likelihood Uncertainty Estimation) program.

TOPMODEL  calibration procedures are  relatively  simple because it uses  very  few parameters in the model
formulas. The  model is very sensitive to changes of the soil hydraulic conductivity decay parameter,  the soil
transmissivity at  saturation, the root zone storage capacity, and the channel routing velocity in larger watersheds.
The calibrated values of parameters are also related to the grid size used in the digital terrain analysis. The timestep
and the grid size also have been shown to influence TOPMODEL simulations.
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Model Interface Capabilities
There are three options available in the program interface:

    •   The Hydrograph Prediction Option: This option allows the model to be run and hydrographs displayed. If a
        Topographic Index Map  File is available, then a map button is displayed that allows the display  of
        predicted simulation, either as a summary over all timesteps or animated.
    •   The Sensitivity Analysis Option: This screen allows the sensitivity of the objective functions to changes of
        one or more of the parameters to be explored.
    •   The Monte Carlo Analysis Option: In this option a large number of runs of the model can be made using
        uniform random samples of the parameters chosen for inclusion in the analysis. Check boxes can be used to
        choose the variables and objective functions to be saved for each run. The results file produced will be
        compatible with the GLUE analysis software package.


References
Beven, K J and M J. Kirkby.  1979. A physically based variable contributing area model of basin hydrology.
Hydrologic Science Bulletin. 24(l):43-69.

Beven, K.J., M.J. Kirkby, N. Schofield, and A.F. Tagg.  1984. Testing a physically-based flood forecasting model
(TOPMODEL) for  three U.K. Catchments. Journal of Hydrology. 69:119-143.

Hornberger, G.M.,  KJ. Beven, BJ. Cosby, andD.E. Sappington.  1985. Shenandoah watershed study: Calibration of
a topography-based, variable contributing area hydrological model to a small forested catchment. Water Resources
Research. 21:1841-1850.

Obled, Ch., J. Wendling, and KJ.  Beven. 1994. The sensitivity of hydrological models to spatial rainfall patterns:
An evaluation using observed data. Journal of Hydrology. 159: 305-333.

Robson, A.J., KJ.  Beven,  and C. Neal.  1992. Towards  identifying sources of subsurface flow: A comparison of
components identified by a physically based runoff model and those determined by mixing techniques. Hydrological
Processes. 6:199-214.

Robson, A.J., P.O.  Whitehead, and R.C. Johnson. 1993. An application of a physically based semi-distributed model
to the Balquhidder  Catchments. Journal of Hydrology. 145:357-370.

Wolock, D.M. 1995. Effects of subbasin size on topographic  characteristics and simulated flow paths  in Sleepers
River Watershed, Vermont. Water Resources Research. 31(8): 1989-1997.

Wolock, D.M., G.M. Hornberger, and T.M. Musgrove. 1990. Topographic effects on flow path length and surface
water chemistry of  the Llyn Brianne Catchments in Wales. Journal of Hydrology. 115:243-259.
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                                                                      Appendix A: Model Fact Sheets
     WAMView: Watershed Assessment Model with an Arc View Interface


Contact Information
Barry Jacobson
Soil and Water Engineering Technology, Inc.
3448 NW 12th Avenue
Gainesville, FL 32605
(352) 378-7372
jacobson(@,swet.com
http ://www. swet. com


Download Information
Availability: Proprietary.
Cost: N/A

The  source code  is not available. The executable code can be downloaded from http://www.swet.com with a
registration.


Model Overview/Abstract
WAMView allows engineers and planners to assess the water quality of surface and groundwater based on land use,
soils and weather stations.


Model Features
    •  Overland attenuation
    •  Stream routing and various water control structures


Model Areas Supported
Watershed             High
Receiving Water        None
Ecological             Low
Air                   None
Groundwater           Low


Model Capabilities

Conceptual Basis
In WAMView, the watershed is conceptualized as a series of cells/grids with different land use, soil, and land slope.
The streams are conceptualized as a series of reaches with computed geometries based on upstream drainage areas,
which may be redefined by the user.


Scientific Detail
The watershed runoff model BUCSHELL generates  grid-based runoff based on land use, soil, topography, and
rainfall with two built-in watershed  model GLEAMS and EAAMOD. GLEAMS  is applied to upland while
EAAMOD is applied to the area with a shallow groundwater table.
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The  stream routing algorithm BLASROUTE is developed based on Manning's equation without a momentum
component. A looping technique is implemented in the stream routing algorithm, and various flow structure
configurations and operation  schedules are implemented. It  is noted that BLASROUTE employs first order
attenuation from cells to reaches, depression and wetlands.


Model Framework
    •   Grid-based watershed
    •   One-dimensional stream routing


Scale

Spatial Scale
    •   Grid-based watershed; typical grid size 100m x 100m
    •   Typical reach/stream length 1000m to 10000m


Temporal Scale
    •   User-defined timestep: typically, a day


Assumptions
    •   Transport  of water and constituent  is dependent on flow distances, gradients, and type of conveyance
        system.
    •   All input data such as land use, soil, hydrology coverages, and land use management activities are accurate.
    •   Rainfall data from individual stations are representative of rainfall across the entire basin.
    •   A reservoir routing technique without a momentum component is representative of low gradient streams.
    •   Phosphorous and nitrogen  process  models within the submodels are  representative of actual transport
        processes.


Model Strengths
    •   Capable of simulating the water quality of surface and groundwater based on land use, soil and weather.
    •   Capable of simulating various BMP scenarios.
    •   Provides a higher resolution of results than models that rely on polygon coverages.
    •   Works well for wetlands.
    •   Capable of routing attenuated runoff into a complex  reach network with flow structures in  the latest
        version.


Model Limitations
    •   Does not include a momentum component in the stream routing algorithm.
    •   May predict flow inaccurately when applied to streams with steep slopes.
    •   Considers limited chemistry constituents.
    •   Includes groundwater component empirically, not fully integrated into the system.


Application History
Past applications of WAMView include:
    •   St. Johns River Watershed Assessment Project
    •   Suwannee  River Watershed Assessment Project
    •   Lower St. Johns River Mainstem Subbasins Hydrologic/Water Quality Modeling
    •   Hydrologic Water Quality Assessment for Myakka River Basin
    •   North Palm Beach County Basin Pollutant Loading and Abatement Analysis
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Model Evaluation
Model evaluation was done through various projects in which the model was calibrated and then validated to a
different time period. The two watershed models used in WAMView are GLEAMS (modified slightly by SWET)
and EAAMOD (developed by SWET for areas with a shallow groundwater table). They were tested and evaluated in
the past. (See EAAMOD ~ Everglades Agricultural Area Model at http://www. swet.com/.)


Model Inputs
    •   Time sequences of boundary conditions—outflow with chemistry constituents of interest (if tidal outflow
        exits), point sources flow with chemistry constituent of interest
    •   Basin polygon coverage, topography coverage, land use coverage, soil coverage, reach  coverage, rain
        station coverage, and utility coverage if any
    •   Time sequences of rainfall data for each station and other weather data, including monthly maximum and
        minimum temperature, monthly average dew point temperature, wind speed and solar radiation
    •   Water control structure configurations and operation schedules, if any


Users' Guide
Available with the download of the executable code: http://www.swet.com. The  guide is too simple.


Technical Hardware/Software Requirements

Computer hardware:
    •   Minimum 100 Mb hard disk space
    •   Minimum 64 Mb RAM
    •   Minimum 200 MHZ co-processor
    •   Minimum 600 x 800 screen resolution


Operating system:
    •   Windows 95/98/ME/NT/2000/XP
    •   Arc View 3.2a with Spatial Analyst 1.1 (or 2.0)


Programming language:
    •   FORTRAN for BUCSHELL and BLASROUTE
    •   AVENUE for pre- and post-processor in a customized Arc View


Runtime estimates:
    •   Hours to a day


Linkages Supported
None


Related Systems
None


Sensitivity/Uncertainty/Calibration
Not available.
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Model Interface Capabilities
The model interface is a customized Arc View interface with good pre- and post-processors. The pre-processor can
process GIS coverage data and create some model input files, and the post-processor can display simulated results in
GIS view and layout windows.


References
WAMView User's Manual. Soil and Water Engineering Technology, Inc.

Jacobson, B.M., A.B. Bottcher, N.B. Pickering, and J. G. Hiscock. 1998. Unique routing algorithm for watershed
assessment model.  American Society of Agricultural Engineers Paper No. 98-2237.  American  Society of
Agricultural Engineers, St. Joseph, MI.

Bottcher, A.B., J.G. Hiscock, N.B. Pickering, and B.M. Jacobson. 1998.  WAM: Watershed Assessment Model for
Agricultural and Urban Landscapes. Presented at the 7th International Conference on Computers in Agriculture.
October 26-30, 1998, Orlando, FL.
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                                                                         Appendix A: Model Fact Sheets
          WARMF: Watershed Analysis Risk Management Framework


Contact Information
Carl W. Chen
Systech Engineering, Inc.
3180 Crow Canyon Place, Suite 260
San Ramon, CA 94583
(925) 355-1780
www. svstechengineering.com


Download Information
Availability: Proprietary
Cost: Depending on projects (Systech conducts an initial model setup)


Model Overview/Abstract
WARMF was developed by Systech Engineering under sponsorship from Electric Power Research Institute (EPRI)
as a decision  support system to support the watershed approach. It was designed to take stakeholders through a
series of  steps to develop and evaluate water quality  management alternatives for a river basin. WARMF also
provides a procedure to calculate the total maximum daily load (TMDL) of pollutants. All necessary databases,
simulation models, and graphical software are integrated into a Windows Graphical User Interface (GUI).


Model Features
    •  Calculates  TMDLs using a bottom-up approach. TMDLs  are determined for multiple control points and
       different allocations of point and nonpoint loads.
    •  Links catchments, river segments, and lakes to form a watershed model.
    •  Uses data  commonly  available  from National Climatic Data Center, EPA, USGS, Natural Resources
       Conservation Services, state and other local agencies, and private data purveyors.
    •  Uses meteorological data to dynamically simulate runoff and nonpoint source loads from land.
    •  Predicts daily hydrology and water quality of rivers and lakes.
    •  Simulates flow, pH, temperature,  dissolved oxygen, ammonia, nitrate, phosphate,  suspended sediment,
       coliform bacteria, major cations and anions, three algal species,  and periphyton.
    •  Simulate metals such as iron, zinc, manganese, and copper.
    •  Displays spatial distributions of point and nonpoint loading using GIS map format.
    •  Displays water quality status in  terms of suitability for fish habitat, swimming,  water supply, and other
       uses.
    •  Accounts for the source controls of atmospheric deposition, nonpoint and point source loads.
    •  Evaluates cost sharing schemes for pollution trading between point and nonpoint dischargers.


Model Areas Supported
Watershed              High
Receiving Water         Medium
Ecological              None
Air                    Low
Groundwater            Medium
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Model Capabilities

Conceptual Basis
WARMF is organized into five linked modules—Engineering,  Data, Knowledge, Consensus, and TMDL.  The
Engineering module is the dynamic, simulation model that drives WARMF. The Data module provides time series
input data (meteorological, point source) and calibration data. The Knowledge module is a utility to store documents
for the watershed. The Consensus and TMDL modules provide road maps to engage stakeholders in building
consensus on a watershed management or TMDL plan.


Scientific Detail
The computing engine is taken from the  Integrated Lake-Watershed Acidification Study (ILWAS) model.  The
ILWAS model divides a watershed into catchments, stream segments, and lake layers. The hydrologic module
simulates the processes of canopy interception, snow pack accumulation and snow melt, infiltration through soil
layers, evapotranspiration from soil, ex-filtration of groundwater to stream segments, kinematic wave routing of
stream flows, and flow routing of the terminal reservoir. The chemistry module performs mass balance and chemical
equilibrium calculations to account for the processes of dry deposition to the canopy, nitrification of ammonia on the
canopy, ion leaching from sap to the canopy surface, washoff by throughfall, ion leaching by snowmelt, and the soil
processes  (e.g.  litter fall,  litter breakdown,  litter decay, nitrification, denitrification,  cation exchange, anion
adsorption, weathering, and nutrient uptake). Algorithms for sediment erosion and pollutant transport from farm
lands and other  land uses were adapted from ANSWERS  and  the Universal  Soil Loss Equation  (USLE).  The
pollutant accumulation and washoff from urban areas was adapted from the  Storm Water Management Model
(SWMM).


Model Framework
    •   Watershed (up to five soil layers)
    •   One-dimensional stream segments
    •   Lake layers (option to select CE-QUAL-W2)


Scale

Spatial Scale
    •   Watershed
    •   One-dimensional stream
    •   Lake layers


Temporal Scale
    •   Daily


Assumptions
    •   The catchment is idealized by a series of compartments (canopy, snow pack, and soil layers).
    •   Each compartment is considered as a continuously stirred tank reactor  (CSTR) for flow routing and mass
        balance  calculation.
    •   Stream hydrology is based on conservation of mass.
    •   The model represents the stream segment as a CSTR.


Model Strengths
    •   For lakes and reservoirs, it has an option of one-dimensional horizontally mixed and vertically stratified or
        two-dimensional vertically stratified.
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Model Limitations
    •   The user needs to contract Systech to setup and calibrate the model.
    •   In the TMDL module, percent reductions can be specified for either point or nonpoint source and WARMF
        will calculate the other. However, as the TMDL module runs through its iterations, it will reduce all
        upstream sources equally. For example, if multiple point sources exist within a subwatershed or upstream,
        all nonpoint sources are reduced equally; the model can not account for individual source contributions.


Application History
WARMF has been applied to various watersheds in the United States and the Techi Watershed of Taiwan.


Model Evaluation
WARMF is being tested on the Catawba River (Duke Energy), Cheat River (AEP and Allegheny Power), Chartiers
Creek (Pennsylvania power companies), and Oostanaula Creek (TVA) basins. In addition, WARMF is being tested
in cooperation with government agencies and other stakeholders in the Truckee River (California/Nevada) and Blue
River (Colorado) watersheds.


Model Inputs
    •   Meteorological data
    •   Point source loading information
    •   Atmospheric deposition loads
    •   Fertilizer application
    •   Subbasin shape file
    •   Land use shape file
    •   Reach Network shape file


Users' Guide
Documentation reports (e.g., User's Guide to WARMF, Documentation of Graphical User Interface) are available to
WARMF users and all reports are available for purchase from Electric Power Research Institute (EPRI).


Technical  Hardware/Software Requirements

Computer hardware:
    •   PC


Operating system:
    •   Graphical User Interface


Programming language:
    •   Computational code: FORTRAN


Runtime estimates:
    •   Minutes to hours


Linkages Supported
None
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                                                                          Appendix A: Model Fact Sheets
Related Systems
None


Sensitivity/Uncertainty/Calibration
An uncertainty analysis can be performed to evaluate the chance of failure for a management plan.


Model Interface Capabilities
    •   Pre- and post-processors
    •   Data display tools


References
Chen, C. W., J. Herr and W. Tsai.  2003. Enhancement of WARMF to Track Mercury Species in a River Basin from
Atmospheric Depositions to Fish  Tissues. Publication No. 1005470. Electric Power Research Institute, Palo Alto,
CA.

Chen, C.W., J. Herr, andL. Weintraub. 2001. Watershed Analysis Risk Management Framework (WARMF): Update
One - A Decision Support System for Watershed Analysis and Total Maximum Daily Load Calculation, Allocation
and Implementation. Publication No.1005181. Electric Power Research Institute, Palo Alto, CA.

Chen, C., J. Herr, and L. Weintraub. 2000. Watershed Analysis  Risk Management Framework (WARMF) User's
Guide: Documentation of Graphical User Interface. Report TR1000729. Electric Power Research Institute, Palo
Alto, CA.

Chen, C. W.,  J. Herr, and  L. Ziemelis.  1998. Watershed Analysis Risk Management Framework - A  Decision
Support System for Watershed Approach andTMDL Calculation. Documentation Report TR110709. Electric Power
Research Institute, Palo Alto, CA.

Chen, C.W., L. Weintraub,  L. Olmsted, and R.A.  Goldstein. Decision framework for sediment control in muddy
creek watershed. Journal of the American Water Resources Association.

Chen, C.W., J. Herr, and L. Weintraub. 2004. Decision support system for stakeholder involvement. Journal of
Environmental Engineering, American Society of Civil Engineers.  130(6):714-721.

Chen, C.W.,  J. Doherty, and J.M. Johnston. 2003  Methodologies for calibration and predictive  analysis of a
watershed model. Journal of the American Water Resources Association.

Herr,  J., C.W. Chen, R.A. Goldstein, R. Herd, and J.M. Brown. 2003. Modeling acid mine drainage on a watershed
scale for TMDL calculations. Journal of the American Water Resources Association. 39(2).

Chen, C.W.,  L.H.Z. Weintraub, J. Herr, and R.A.  Goldstein. 2000.  Impacts of a thermal power plant on the
phosphorus TMDL of a reservoir. Environmental Science and Policy. 3:217-223.

Chen, C. W.,  J. Herr, L. Ziemelis, R. A. Goldstein, and  L. Olmsted. 1999. Decision support system for total
maximum daily load. Journal of Environmental Engineering, American Society of Civil Engineers. 125(7):653-659.

Chen, C.W.,  W.T. Tsai,  and A.A. Lucier.  1998.  A model of  air-tree-soil system for ozone impact  analysis.
Ecological Modeling. 111:207-222.

Chen, C. W., J. Herr, L.  Ziemelis, M. C. Griggs, L. L. Olmsted,  and R. A. Goldstein. 1997. Consensus module to
guide watershed management decisions for catawba River Basin. The Environmental Professional. 19:75-79.

Chen, C. W., J. Herr, R. A. Goldstein, F. J. Sagona, K. E. Rylant, and G. E. Hauser. 1996. Watershed risk analysis
model for TVA's Holston River Basin. Water, Air and Soil Pollution. 90:65-70.
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                                                                           Appendix A: Model Fact Sheets
Chen, C.W., D. Leva, and A. Olivieri. 1996. Modeling the fate of copper discharged to San Francisco Bay. Journal
of Environmental Engineering, American Society of Civil Engineers. 122(10).

Chen, C.W., W.T. Tsai, and L.E. Gomez. 1994. Modeling Responses of Ponderosa Pine to Interacting Stresses
Ozone and Drought Forest Science. 40(2):267-288.
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                                                                       Appendix A: Model Fact Sheets
                WASP: Water Quality Analysis Simulation Program


Contact Information
Tim Wool
Center for Exposure Assessment Modeling (CEAM)
U.S. Environmental Protection Agency
Office of Research and Development
Environmental Research Laboratory
960 College Station Road
Athens, Georgia 30605-2720
(706)355-8312
wool.tim(@,epa. gov


Download Information
Availability: Nonproprietary
Version 5.1: http://www.epa.gov/ceampubl/swater/wasp/index.htm
Version 6.2: http://www.epa.gov/athens/wwqtsc/html/wasp.html
Cost: N/A


Model  Overview/Abstract
WASP is a generalized modeling framework based on the finite-volume concept for quantifying fate and transport
of water quality variables in surface waters. The three components of the model are WASP for mass transport;
EUTRO for dissolved oxygen, nutrients, and algal kinetic; and TOXI for toxic substances. WASP is capable of
analyzing time-variable or steady state, one-, two-, or three-dimensional water quality problems. WASP5 is a DOS
application and WASP6 is a Windows  application. WASP model has been widely applied to investigate dissolved
oxygen, bacteria, eutrophication, suspended solids, and toxic substance problems.


Model  Features
    •   Tracer transport
    •   Eutrophication
    •   Dissolved oxygen
    •   Nutrients
    •   Toxic
    •   Sediment transport


Model  Areas Supported
Watershed              None
Receiving Water        High
Ecological              Medium
Air                   None
Groundwater           None
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Model Capabilities

Conceptual Basis
The waterbodies are conceptualized as well-mixed control volume, and the law of conservation of mass is applied to
each control volume.


Scientific Detail
The governing equations for the WASP model are the advection-dispersion-reaction equations for the water quality
variables. The WASP module provides the advection and dispersion solution and the EUTRO and TOXI modules
provide the reaction solutions of dissolved oxygen, nutrients, and algae. A one-step Euler  solution technique is
applied for the time difference. The advection terms in the governing equations are solved with UPWIND difference
in space. The water quality variables can be turned on/off depending on modeling requirements.


Model Framework
    •   One-, two-, or three-dimensional
    •   Any type of waterbody


Scale

Spatial Scale
    •   One-, two-, or three-dimensional


Temporal Scale
    •   User-defined timestep


Assumptions
    •   Completely mixing control volume


Model Strengths
    •   WASP model is a very flexible modeling framework and can simulate water quality in one-, two-, or three-
        dimensional space.
    •   The control volume structure promises the conservation of mass. WASP provides the transport computation
        framework and can be incorporated with EUTRO  to  simulate eutrophication, nutrient,  and dissolved
        oxygen. It also can be incorporated with TOXI to model metals, toxics, and sediment transport.


Model Limitations
    •   Requires external hydrodynamic  model to provide flow  file for  solving advection. The file size might be
        very large in several gigabytes for long-term simulation.
    •   User specified dispersion coefficient and temperature.
    •   First-order UPWIND difference in space may cause significant numerical diffusion.
    •   Over-simplified sediment flux calculation.
    •   No periphyton or macroalgae.
    •   Sediment transport processes are not related to shear stress.


Application History
A significant  amount of WASP applications  can be found in technical reports, journal and conference papers.
Examples  of  application include modeling eutrophication of Tampa Bay, Neuse  River, the Great Lakes, and
Potomac Estuary; and examining phosphorus loading to Lake Okeechobee, PCB pollution of the Great Lakes, and
kepone pollution of the James River Estuary.
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Model Evaluation
WASP model is widely cited in peer reviewed journal papers.


Model Inputs
    •  Initial conditions
    •  Point and nonpoint sources inputs
    •  Flow file
    •  Vertical mixing coefficients
    •  Open boundary conditions
    •  Biological and chemical reaction rates


Users' Guide
WASP5:
    •  The Water Quality Analysis Simulation Program, WASPS, Part A: Model Documentation.
    •  The Water Quality Analysis Simulation Program, WASPS, Part B: The WASPS Input Data Set
    •  Available in model download file: http://www.epa.gov/ceampubl/swater/wasp/index.htm
WASP6:
    •  Water Quality Analysis Simulation Program (WASP) Version 6.0, Draft: User's Manual
    •  Available online: http://www.epa.gov/athens/wwqtsc/html/wasp.html:


Technical Hardware/Software Requirements

Computer hardware:
    •  PC


Operating system:
    •  PC-DOS, Windows


Programming language:
    •  FORTRAN (WASPS),


Runtime estimates:
    •  Minutes to hours


Linkages Supported
DYNHYD5 provides the flow information to WASPS. Other models  that provides flow file include RIVMOD,
EFDC, and SWMM.


Related Systems
QUAL2E, QUAL2K, CE-QUAL-RIV1, CE-QUAL-W2, CW-QUAL-ICM, CAEDYM


Sensitivity/Uncertainty/Calibration
Not available
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                                                                         Appendix A: Model Fact Sheets
Model Interface Capabilities
    •   WASP6 provides a Windows interface including pre-processor and post-processor


References
Ambrose, R.B., T.A. Wool, and J.L. Martin. 1993a. The Water Quality Analysis Simulation Program, WASPS, Part
A: Model  Documentation. U.S. Environmental  Protection Agency, Center for Exposure Assessment Modeling,
Athens, GA.

Ambrose, R.B., T.A. Wool, and J.L. Martin. 1993b. The Water Quality Analysis Simulation Program, WASPS, Part
B: The WASPS Input Dataset. U.S. Environmental Protection Agency, Center for Exposure Assessment Modeling,
Athens, GA.

Wool,  T.A, R.B. Ambrose, J.L. Martin, and E.A. Comer. Water Quality Analysis Simulation Program  (WASP)
Version 6.0 Draft:  User's Manual
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                                                                         Appendix A: Model Fact Sheets
                       WEPP: Water Erosion Prediction Project


Contact Information
U.S. Department of Agriculture
Agricultural Research Service
National Soil Erosion Research Laboratory
1196 Building SOIL, Purdue University
West Lafayette, Indiana 47907-1196
(765) 494-8673
nserl(@,horizon. nserl.purdue.edu


Download Information
Availability: Nonproprietary
Download site: http://topsoil.nserl.purdue.edu/nserlweb/weppmain/wepp.html
Download instructions/limitations: Registration optional
Cost: N/A


Model Overview/Abstract
The WEPP model is a process-based, distributed parameter, continuous simulation, erosion prediction model for use
on personal computers running Windows 95/98/NT/2000/XP. The current model version (v2002.700) available for
download is applicable to hillslope erosion processes (sheet and rill erosion) as well as simulation of the hydrologic
and erosion processes on small  watersheds. The WEPP model (version  2002.700), WEPP  Windows interface
(March 2004), CLIGEN climate generators (versions 4.3 and 5.2), documentation, and example data are included in
the download package.


Model Features
    •   Process-oriented
    •   Continuous simulation
    •   Erosion prediction
    •   Applicable to small watersheds (field-sized); can simulate small profiles (USLE types) up to large fields.
    •   Mimics the  natural processes that are  important in soil erosion. Everyday  it  updates the  soil and crop
        conditions that affect soil erosion.  When rainfall  occurs, the plant and soil characteristics are  used  to
        determine if surface runoff will occur. If predicted, then the program will compute estimated sheet and rill
        detachment and deposition and channel detachment and deposition.


Model Areas Supported
Watershed              Medium (sediment only)
Receiving Water         Low (channels)
Ecological              None
Air                    None
Groundwater            None
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Model Capabilities

Conceptual Basis
Conceptually WEPP is similar to CREAMS, SWRRB, and EPIC, but formulations are more process-based, rather
than statistical relations. The model is based on stochastic weather generations, infiltration theory, hydrology, soil
physics, plant science, hydraulics, and erosion mechanics.


Scientific Detail
The WEPP model includes components for weather generation, frozen soils, snow accumulation and melt, irrigation,
infiltration, overland flow hydraulics, water balance, plant growth, residue decomposition,  soil disturbance by
tillage, consolidation, and erosion and deposition.

    •   Weather generator -  precipitation  by  two-state Markov chain model;  daily maximum and minimum
        temperatures and solar radiation from normal distributions; and wind speed and direction based on the
        historical distributions
    •   Winter processes - soil frost by fundamental heat theory and snow melt by generalized snow melt equation
    •   Irrigation  - stationary sprinkler systems with four  irrigation-scheduling options—(1) no irrigation, (2)
        depletion-level scheduling, (3) fixed-date scheduling, and (4) a combination of the second and third options
    •   Infiltration - Green-Ampt Mein-Larson infiltration equation
    •   Evapotransipration - Penman equation
    •   Hillslope  erosion  and deposition  - RUSLE  for hillslope version; deterministic equations based on
        infiltration theory, soil physics,  and erosion mechanics, for other versions; and detachment, transport, and
        deposition based on steady state solution to the sediment continuity equation
    •   Flow depth and hydraulic shear stress - steady state, spatially varied flow equations
    •   Impoundment component - runoff and sediment routed through several types of impoundment structures,
        including farm ponds,  culverts, filter fences, and check dams.


Model Framework
    •   Single watershed composed of a network of hillslopes and channels.


Scale

Spatial Scale
    •   Hillslope or small watershed


Temporal Scale
    •   Daily, monthly or annual


Assumptions
    •   Sediment delivery rate is assumed to be proportional  to the product of rainfall intensity and interrill runoff
        rate.
    •   Broad sheet flow on an  idealized surface is  assumed for overland flow  routing and  hydrograph
        development.
    •   Steady state conditions are assumed at the peak runoff rate for erosion calculations.
    •   Heat flow in a frozen or unfrozen soil or soil-snow system is unidirectional.


Model Strengths
    •   WEPP is capable of estimating the spatial and temporal distributions of soil loss.
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                                                                          Appendix A: Model Fact Sheets
    •   Since the model contains  processed based  hydrology, water  balance,  plant growth,  and residue
        decomposition components, the model has wider range of applications  compared to other erosion
        prediction models.


Model Limitations
    •   The model is not suitable for large watersheds. It is appropriate only for hillslope profiles of tens of meters
        and small watersheds up to hundreds of meters.


Application History
Application of WEPP other than by the developers is very limited. Kincaid (2002) used WEPP to predict runoff and
erosion under sprinkler irrigation and found that the model can be used as an irrigation and management tool to help
prevent runoff from sprinkler irrigation.


Model Evaluation
Though there are a lot  of publications available  evaluating the applicability  of the model.  Most  of them are
publications by members of the  development team and  are not peer reviewed.  There are also few peer-reviewed
publications available. Tiwari et al. (2000) conducted a study to evaluate WEPP and also to compare the results with
the predictions by USLE  and RUSLE. Bjorneberg et al. (1999) evaluated the model under furrow irrigated
conditions and found that the model could not be used without modifications. Reyes et al. (2004) conducted a study
to compare the runoff volume predictions of GLEAMS, EPIC and WEPP and the soil loss predictions of GLEAMS,
RUSLE, EPIC and WEPP. They found that the WEPP consistently under-predicted the soil loss.


Model Inputs
The WEPP model includes a number of conceptual components, which are used to predict and calculate estimates of
soil detachment and deposition. The different input requirements for these components include:

    •   Climate-rainfall parameters, temperature, solar radiation, wind
    •   Winter-freeze-thaw, snow accumulation, snow melting
    •   Irrigation-stationary sprinkler, furrow
    •   Hydrology-infiltration, depressional storage,  runoff
    •   Water balance-evapotranspiration, percolation, drainage
    •   Soils-types and properties
    •   Crop growth-cropland, rangeland, forestland
    •   Residue management and decomposition
    •   Tillage impacts on infiltration and credibility
    •   Erosion-interrill, rill, channel
    •   Deposition-rills, channels, and impoundments
    •   Sediment delivery, particle sorting and enrichment


Users' Guide
Available online: http://topsoil.nserl.purdue.edu/nserlweb/weppmain/wepp.html


Technical Hardware/Software Requirements

Computer hardware:
    •   PC


Operating system:
    •   Windows 95/98/NT/2000/XP
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                                                                         Appendix A: Model Fact Sheets
Programming language:
    •   FORTRAN 77


Runtime estimates:
    •   Minutes


Linkages Supported
None


Related Systems
CREAMS, SWRRB and EPIC


Sensitivity/Uncertainty/Calibration
Not available


Model Interface Capabilities
    •   Windows-based GUI interface for input creation
    •   GIS interface for WEPP (GeoWEPP)


References
Blorneberg, D. L., T. J. Trout, R. E. Sojka, and J. K. Aase.  1999. Evaluating WEPP-predicted infiltration, runoff,
and soil erosion for furrow irrigation. Transactions of the American Society of Agricultural Engineers. 42(6):  1733-
1741.

Cochrane, T. A., and D. C. Flanagan. 2003. Representative hillslope methods for applying the WEPP model with
DEMs and GIS. Transactions of the American Society of Agricultural Engineers. 46(4): 1041-1049.

Flanagan, D. C., and M. A. Nearing, eds. 1995. USDA-water Erosion Prediction Project: Technical documentation.
NSERL Report No. 10. U.S.  Department of Agriculture-Agricultural Research Service- National  Soil Erosion
Research Lab, West Lafayette, ID.

Kincaid, D. C.  2002. The WEPP model for runoff and erosion prediction under sprinkler irrigation. Transactions of
the American Society of Agricultural Engineers. 45(1): 67-72.

Reyes, M. R.,  C. W. Raczkowski, G.  A.  Gayle, and G.  B.  Reddy. 2004. Comparing the soil loss predictions of
GLEAMS, RUSLE, EPIC, and WEPP.  Transactions of the American Society of Agricultural Engineers. 47(2): 489-
493.

Tiwari,  A. K.,  L. M. Risse,  and M.  A. Nearing. 2000. Evaluation of WEPP and its comparison with USLE and
RUSLE. Transactions of the American Society of Agricultural Engineers. 43(5): 1129-1135.

Ward, George H., Jr. and Jennifer Benaman. 1999. Models for TMDL Application in Texas Watercourses: Screening
and Model  Review. Online Report CRWR-99-7. Center for Research in Water Resources, University of Texas,
Austin.
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                                                                      Appendix A: Model Fact Sheets
              WinHSPF: An Interactive Windows Interface to HSPF


Contact Information
U.S. Environmental Protection Agency
Office of Water
Office of Science and Technology (430IT)
1200 Pennsylvania Avenue, N.W.
Washington, D.C.  20460
basins(@,epa.gov

AQUA TERRA
http://www.aquaterra.com/


Download Information
Availability: Nonproprietary
http://www.epa.gov/ost/ftp/basins/svstem/BASINS3/gww.htm
Cost: N/A


Model Overview/Abstract
WinHSPF  was designed as an interactive Windows interface to  Hydrologic Simulation Program FORTRAN
(HSPF). It is a fully-integrated component of the BASINS system but can be run stand-alone. WinHSPF can be used
to build User Control Input (UCI) files from GIS data, especially data from the EPA's BASINS system. After the
UCI file is built, WinHSPF  can be used to view and modify  the model  representation of a watershed.  The
FORTRAN program HSPF can be run from within WinHSPF. Modifying a given UCI file and saving as another
name creates multiple simulation scenarios. Within  the BASINS system, WinHSPF is intended to be used in
conjunction with the interactive program known as "GENeration and analysis of model simulation SCeNarios," or
GenScn. GenScn  allows  the user to analyze results of model simulation scenarios and compare scenarios. This
system architecture allows the user to choose the system environment that best suits his or her needs.


Model Features
    •   Detailed watershed simulation model
    •   Watershed hydrology
    •   Runoff/Sediment/Pollutant generation and transport
    •   One-dimensional stream hydrology and transport
    •   Pesticide  fate and transport simulation


Model Areas Supported
Watershed              High
Receiving Water        Medium
Ecological              None
Air                   None
Groundwater           Low
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Model Capabilities

Conceptual Basis
HSPF was the primary watershed model adopted into the original BASINS system. HSPF simulates the complete
watershed hydrology  precipitation,  interception, evapotranspiration, runoff,  interflow,  groundwater flow, and
groundwater loss to deep aquifers. A continuous simulation model driven by meteorological time series data, HSPF
also simulates the fate and transport of a wide variety of pollutants, such as nutrients, sediments, tracers, dissolved
oxygen/biochemical oxygen demand, temperature, bacteria,  and user-defined constituents. It simulates pollutant
accumulation and reactions on pervious and impervious land  segments, runoff and pollutant discharge loads  to
stream segments, in-stream reactions, flow, and pollutant routing through river reach networks.

The BASINS WinHSPF Windows interface replaces the former  Nonpoint Source Model (NPSM) interface included
in the original versions of BASINS. WinHSPF provides complete access to HSPF's functionality and user input data
files.  The model  estimates land use (rural and urban mixtures)  specific nonpoint source loadings for selected
pollutants at an 8-digit HUC or subwatershed scale. The  model uses GIS landscape data such as land use distribution
and elevation data together with the watershed and drainage stream network characteristics to automatically prepare
many of the  input data it requires. WinHSPF is a continuous simulation model driven by meteorological events and
used to analyze water  quality impacts from multiple point and nonpoint pollutant sources. It can be used for single
or multiple hydrological connected watersheds and is designed for evaluating alternative pollution control scenarios.

A user also  can simulate point source contributions  in WinHSPF. Data from EPA's  Permit Compliance  System
(PCS) are provided. This is a simplified implementation in that only a  single value of flow from the facility and
pollutant concentration (based on NPDES permit limits) can be specified.


Scientific Detail
Land processes for pervious and impervious areas are  simulated through water budget, sediment generation and
transport, and water quality constituents' generation and transport. Hydrology is modeled as water balance of soil
(or  storage) in different layers as described by the  Stanford Watershed Model (SWM) methodology. Interception,
infiltration, evapotranspiration, interflow, groundwater  loss and overland flow processes are considered  and are
generally represented  by empirical equations. Sediment production is based on detachment or scour from a soil
matrix and transport by overland flow  in pervious  areas, while solids buildup and washoff are simulated for
impervious areas.  It includes agricultural components for land-based nutrient and pesticide processes and a special
actions block for simulating management activities. HSPF also simulates the in-stream fate and transport of a wide
variety  of  pollutants  such  as  nutrients,  sediments,  tracers,  dissolved oxygen/biochemical  oxygen demand,
temperature, bacteria, and user-defined constituents.


Model Framework
    •   Hydrologic response unit, subwatershed, and  watershed
    •   Simple one-dimensional stream and well-mixed reservoir/lake model
    •   WinHSPF interface uses an object-oriented data structure to link to the HSPF model


Scale

Spatial Scale
    •   Lumped parameters at a land use-subwatershed basis
    •   Subwatershed—variable size up to internal operations limit


Temporal Scale
    •   User-defined timestep, typically hourly


Assumptions
    •   It is a distributed model by land use but ignores the spatial variation within a land use in a subwatershed.
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    •   The receiving waterbody is well mixed along the width and depth. Assumes one-directional flow.


Model Strengths
    •   One  of the few watershed models capable of simulating land processes and receiving water processes
        simultaneously.
    •   Capable of simulating both peak flow and low flow.
    •   Simulates at a variety of timesteps, including sub-hourly to one minute, hourly or daily.
    •   Simulates the hydraulics of complex natural and man-made drainage networks.
    •   Includes capabilities to address a variable water table.
    •   Simulate results for many locations along a reservoir or tributary.
    •   Includes user-defined model output options by defining the external targets block.
    •   Can be setup as simple or complex, depending on application, requirement, and data availability.


Model Limitations
    •   Relies on many empirical relations to represent physical process.
    •   Lumps simulation processes for each land use type at the subwatershed level (i.e., does not consider the
        spatial  location of one land parcel relative to another in the watershed). The model approaches a distributed
        model  when smaller subwatersheds are used;  however, this may  result in increased model  size and
        simulation time.
    •   Requires extensive calibration.
    •   Requires a high level of expertise for application.
    •   Is limited to well-mixed rivers and reservoirs and one-directional flow.


Application History
The underlying  HSPF model is  a proven, tested continuous simulation watershed model. It is one of the models
recommended by the EPA for complex TMDL studies. The HSPF model has been used widely  and the applications
have been documented for more than 20 years.


Model Evaluation
The  WinHSPF  interface has an application history dating to  the recent release  of BASINS 3.0. However, the
underlying HSPF model has been widely reviewed and applied throughout its history (Hicks, 1985, Ross et al.,
1997, and Tsihrintzis  et al., 1996). One  of the largest applications of the  model was  to the Chesapeake Bay
Watershed, as part of the Chesapeake  Bay Program's management initiative (Donigian, 1990,  1992). Tsihrintzis et
al. (1994, 1995) applied HSPF in a GIS shell (using ARC/INFO) to evaluate the impact of agricultural activities,
specifically the transport of sediments, nutrients, and pesticides, on streams and groundwater in southern Florida. An
extensive HSPF bibliography has been compiled to document model development and application, and is Available
online: http://hspf.com/hspfbib.html.


Model Inputs
    •   Continuous meteorological time series records including (at a minimum):
            o   Rainfall
            o   Potential evapotranspiration
    For snow simulation, additional required meteorological time series include:
            o   Temperature
            o   Wind speed
            o   Solar Radiation
            o   Dewpoint Temperature
    For additional simulation options,  other required meteorological time series may include:
            o   Pan Evaporation
            o   Cloud Cover
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                                                                        Appendix A: Model Fact Sheets
    •   Soils data (auxiliary dataset to  guide  hydrologic  calibration), pollutant buildup and washoff, stream
        dimensions or rating curves, point-source loading inputs
    •   A large number of parameters need to be specified (some default values are available).


Users' Guide
    •   WinHSPF Users' Manual is available online: http://www.epa.gov/waterscience/basins/bsnsdocs.htmMwin
    •   For model  documentation,  underlying theory,  and parameterization the HSPF  users' manual  is a
        recommended source (Bicknell et al, 2001).
    •   A browsable Windows help file version of the manual is available at http://hspf.com/pub/hspf/HSPF.chm.


Technical Hardware/Software Requirements

Computer hardware:
    •   PC with Windows Operation System


Operating system:
    •   Microsoft Windows


Programming language:
    •   FORTRAN (model) and Visual Basic (interface)


Runtime estimates:
    •   Minutes to less than an hour


Linkages Supported
None


Related Systems
WinHSPF, an interface to the Hydrological Simulation Program-FORTRAN (HSPF), is a key component of Better
Assessment Science Integrating Point and Nonpoint Sources (BASINS) Version 3.0.  BASINS 3.0 is being
developed for  the EPA's Office of Water to  respond to the  continued needs of various  agencies to  perform
watershed and water quality assessments integrating point and nonpoint sources.


Sensitivity/Uncertainty/Calibration
WinHSPF assists the user in building the necessary datasets and making the necessary modifications to the input
sequence for hydrologic calibration using the U.S. Geological Survey's Expert System for the Calibration of HSPF
(HSPEXP).


Model Interface Capabilities
WinHSPF provides an interactive interface to HSPF in a Windows environment. WinHSPF may be used for creating
a new HSPF input sequence  or for modifying an existing HSPF input sequence. The program HSPF may be run
from within WinHSPF.  Input sequences  may be modified  and saved under another name to create  simulation
scenarios.


References
Bicknell, B.R., J.C. Imhoff, J.L. Kittle, Jr., T.H. Jobes, and A. S. Donigian, Jr.  2001. Hydrological  Simulation
Program - Fortran, Version 12, User's Manual. AQUA TERRA Consultants.
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                                                                           Appendix A: Model Fact Sheets
Hicks, C.N. 1985. Continuous Simulation of Surface and Subsurface Flows in Cypress Creek Basin, Florida, Using
Hydrological Simulation Program - FORTRAN (HSPF). Water Resources Research Center, University of Florida,
Gainesville, FL.

Lumb, A.M., McCammon, R.B., and Kittle, J.L.,  Jr.  1994.  Users Manual for an Expert System (HSPEXP) for
Calibration of the Hydrologic Simulation Program—FORTRAN. Report  94-4168 U.S. Geological Survey Water-
Resources Investigations.

Ross, M.A.,  P.O. Tara, J.S. Geurink, and M.T.  Stewart.  1997.  FIPR  Hydrologic  Model:  Users  Manual and
Technical Documentation. Florida Institute of Phosphate Research and  Southwest  Florida Water  Management
District, University of South Florida, Tampa, FL.

Scheckenberger, R.B., and A.S. Kennedy. 1994. The Use of HSPF in Subwatershed Planning. In Current Practices
in Modeling the Management of Stormwater Impacts. W. James. Lewis Publishers, Boca Raton, FL. pp. 175-187.

Tsihrintzis, V., H. Fuentes, and R. Gadipudi, 1994.  Interfacing GIS and water quality models for agricultural areas.
Hydraulic Engineering American Society of Civil Engineers. 1:252-256.

Tsihrintzis, V.A., H.R. Fuentes and R.  Gadipudi. 1996. Modeling prevention  alternatives for  nonpoint source
pollution at a wellfield in Florida. Water Resources Bulletin, Journal of the American Water Resources Association
32(2):317-331.
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                                                                         Appendix A: Model Fact Sheets
                           WMS: Watershed Modeling System


Contact Information
Environmental Modeling Systems, Inc.
1204 West South Jordan Parkway, Suite B
South Jordan, UT 84095-4612
(801) 302-1400
info(@,ems-i.com

U.S. Army Corps of Engineers
Engineer Research and Development Center
Coastal and Hydraulics Lab
Hydrological Systems Branch
Vicksburg,MS39180


Download Information
Availability: Proprietary
http://www.ems-i.com/WMS/wms.html
A limited public domain version also is available at this link:
http://www.ems-i.com/WMS/WMS  Freeware/wms freeware.html
Cost: Complete Package ($4,600)


Model Overview/Abstract
WMS is a comprehensive graphical modeling environment for all phases of watershed hydrology and hydraulics. It
was developed by the Environmental Modeling Research Laboratory of Brigham Young University in cooperation
with the U.S. Army Corps of Engineers Waterways Experiment Station. WMS consists of tools that automate
modeling processes  such as automated basin  delineation,  geometric parameter calculations, and  GIS overlay
computations (CN, rainfall depth, roughness coefficients, etc.). WMS 7 supports hydrologic modeling with HEC-1
(HEC-HMS), TR-20, TR-55, Rational Method, NFF, MODRAT, and HSPF. It also supports hydraulic models such
as HEC-RAS and CE-QUAL-W2. WMS is  designed to be modular, enabling the user to select only those modules
and hydrologic modeling capabilities  that are required.  Additional WMS modules can be added  at any time. To
facilitate data transfer between Arc View GIS and WMS, an extension called WMSHydro has been developed. This
extension creates a WMS/Arc View "super file"  which is a collection of Arc View shapefiles and ASCII grid files.
The super file can be exported either from WMS  or this extension. This super file also can be imported into WMS or
Arc View as themes (coverages) and grids.


Model Features
WMS is structured into eight modules. Only one module is active at any given time.

    •   Terrain Data: Used for basin delineation with Triangulated Irregular Networks (TINs).
    •   Drainage: Used for basin delineation with gridded Digital Elevation Models (OEMs).
    •   Map: Used to create data layers from GIS objects (drainage, soil, land use, etc.)
    •   Hydrologic Modeling:  Contains interfaces to hydrologic models.
    •   River: Contains tools for creating one-dimensional hydraulic models.
    •   GIS: Used to open shape file data and convert them to feature objects.
    •   2D Grid: Used for finite difference models (currently research models only).
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                                                                         Appendix A: Model Fact Sheets
    •   2D Scatter Point: Contains two-dimensional scatter point interpolation tools.


Model Areas Supported
Watershed              High
Receiving Water        High
Ecological              None
Air                    None
Groundwater            Medium


Model Capabilities

Conceptual Basis
In WMS, a subwatershed is delineated based on DEM (grid) or TIN. Several small subwatersheds and representative
streams may be networked together to represent a  larger watershed drainage area.  Various hydrological and
hydraulic models are supported by WMS and can be  used through WMS to simulate the various land and stream
processes.


Scientific Detail
WMS supports  several numerical models to compute peak flow,  hydrographs, and water quality.  Each model is
supported through the Hydrologic Modeling Module  with a completely integrated interface for parameter input,
model run, and output display. The models available for use with WMS are:

    •   HEC-1  (HMS): HEC-1 is the most commonly used lumped parameter model and was developed by the
        U.S. Army Corp  of Engineers' (USAGE) Hydrologic  Engineering Center. HEC-1 simulates the surface
        runoff from a single precipitation event.
    •   TR-20:  TR-20 is designed to compute surface runoff from natural or synthetic rainstorm events and was
        developed by the U.S. Department of Agriculture's Natural Resource Conservation Service (NRCS).
    •   TR-55:  TR-55 was developed by  the NRCS as a simplified  method to compute  storm runoff in small,
        urbanized watersheds.
    •   MODRAT: MODRAT is the specialized Modified Rational Method program used by the Los Angeles
        County, California, to compute surface runoff.
    •   StormDrain: The StormDrain model does complete storm sewer network analysis for steady  state  or
        transient flow  conditions. It is based  on the HYDRAIN analysis code from the Federal Highway
        Administration (FHWA).
    •   CE-QUAL-W2: CE-QUAL-W2 is a two-dimensional  (profile) hydraulic model used for water  quality
        analysis in rivers and reservoirs where vertical variation analysis is required.
    •   National Flood Frequency (NFF): The NFF program evaluates regional regression equations for estimating
        flood peak discharges. It is developed by the  U.S. Geological Survey (USGS) in cooperation with FHWA
        and Federal Emergency Management Agency (FEMA).
    •   Rational Method: The Rational Method is one of the simplest and best-known methods of hydrology. It
        computes peak discharge from an area based on rainfall intensity and a runoff coefficient.
    •   Hydrological Simulation Program-FORTRAN (HSPF):  HSPF simulates hydrologic and water-quality
        processes on land surfaces,  streams,  and impoundments. It  is commonly used in the development  of
        TMDLs.
    •   HEC-RAS: HEC-RAS is a one-dimensional hydraulic model for computing  water surface profiles for
        steady state or gradually varied flow.
    •   GSSHA: GSSHA is a distributed  (two-dimensional) hydrologic model developed for analysis of surface
        runoff,  channel hydraulics, and groundwater interaction. Water quality and sediment transport also are
        supported. It was developed by the  USAGE Engineer Research and Development Center (ERDC).


Model Framework
    •   Watershed hydrologic, sediment, and water quality
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                                                                         Appendix A: Model Fact Sheets
    •   Time series overland, subsurface, and in-stream simulation


Scale

Spatial Scale
    •   Watershed or subwatershed—flexible size
    •   Lumped parameters at a land use-subwatershed basis


Temporal Scale
    •   Variety of timesteps, including hourly or daily


Assumptions
    •   It is a distributed model by land use but ignores the spatial variation within a land use in a subwatershed.


Model Strengths
    •   It is more robust in TIN triangulation and processing.
    •   It provides tools to extract the significant elevation points from DEMs.
    •   TINs or DEMs contours can be exported as feature lines and then to shape files.
    •   It supports several hydrological and hydraulic models through WMS interfaces.


Model Limitations
    •   The model relies on many empirical relations to represent physical process.
    •   It requires a high level of expertise for application.
    •   There is a limited public domain version and the full package is expensive.


Application History
WMS provides the interface linkage to various popular and tested models such as HSPF, which is a continuous
simulation watershed model. HSPF is one of the models recommended by the EPA for complex TMDL studies. The
HSPF model has been used widely and the applications have been documented for more than 20 years.


Model Evaluation
HSPF has been widely reviewed and applied throughout its  long history (Hicks, 1985, Ross  et al.,  1997, and
Tsihrintzis et al., 1996). One of the largest applications of the model was to the Chesapeake Bay Watershed, as part
of the EPA's Chesapeake  Bay Program's management initiative  (Donigian, 1990, 1992).  An extensive HSPF
bibliography has been compiled to document model development  and  application,  and is available online at
http://hspf.com/hspfbib.html.


Model Inputs
Some of the most common coverage types used in WMS include:

    •   Drainage
    •   Storm Drain
    •   ID-Hyd Centerline
    •   ID-Hyd Cross Section
    •   Area Property
    •   NFF Region
    •   Soil Type
    •   Land Use
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                                                                      Appendix A: Model Fact Sheets
    •   Time Computation

A large number of parameters need to be specified for the specific model through the graphical user interface.


Users' Guide
WMS documentation is available online:
http://www.ems-i.com/WMS/WMS Downloads/wms downloads.html
WMS online help is available at these links:
http://www.ems-i.com/wms70help/WMSHELP.htm
http://www.bossintl.com/online help/wms/source/introduction/introduction.htm


Technical Hardware/Software Requirements

Computer hardware:
    •   500MhZ processor
    •   128 MB RAM
    •   100 MB disk space


Operating system:
    •   Microsoft Windows NT/Me/2000/XP


Programming language:
    •   Visual Basic with ArcObjects and OpenGL Technology


Runtime estimates:
    •   Minutes to less than an hour


Linkages  Supported
    •   HEC-l (HEC-HMS)
    •   TR-20
    •   TR-55
    •   MODRAT
    •   StormDrain
    •   CE-QUAL-W2
    •   National Flood Frequency Program (NFF)
    •   Rational Method
    •   Hydrologic Simulation Program - FORTRAN (HSPF)
    •   HEC-RAS
    •   GSSHA (Gridded Surface Subsurface Hydrologic Analysis)


Related Systems
WMS supports several numerical models as listed in Linkages Supported section.


Sensitivity/Uncertainty/Calibration
The Hydrologic Modeling Module of WMS contains the tools for computing complex hydrologic parameters by
using digital terrain or GIS data needed for input to a model. It serves as a good starting point for model setup and
calibration.
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                                                                           Appendix A: Model Fact Sheets
Model Interface Capabilities
WMS provides GIS style tools and functionality that make it easy to build models and view results. All modeling
parameters are entered through interactive graphics and easy-to-use dialog boxes. The system reads and writes
native model input/output files through graphical user interface.


References
Dellman, P.N., C.E. Ruiz, C.T  Manwaring, and E.J. Nelson.  2002.  Watershed Modeling System Hydrological
Simulation Program; Watershed Model User Documentation and Tutorial. Engineer Research and Development
Center, Environmental Lab, Vicksburg, MS.

Donigian, A.S. Jr., and A.S. Patwardhan.  1992. Modeling nutrient loadings from croplands in the Chesapeake Bay
Watershed. In Proceedings of water resources sessions at Water Forum  '92, Baltimore, MD August 2-6, pp. 817-
822.

Donigian, A.S., Jr., B.R. Bicknell, L.C. Linker, J. Hannawald, C. Chang, and R. Reynolds.  1990. Chesapeake Bay
Program Watershed Model Application to Calculate Bay Nutrient  loadings: Preliminary  Phase I Findings and
Recommendations. Prepared for the U.  S. Chesapeake  Bay Program,  Annapolis,  MD, by  AQUA TERRA
consultants.

Downer, Charles  W.; Nelson, E. J.;  Byrd, Aaron. 2003. Primer: Using Watershed Modeling System (WMS) for
Gridded Surface Subsurface  Hydrologic Analysis (GSSHA) Data Development -  WMS 6.1 and GSSHA  1. 43C.
Engineer Research and Development Center, Coastal and Hydraulics Lab, Vicksburg, MS.

Environmental Modeling Research Laboratory (EMRL).  1998.  Watershed modeling system  (WMS) reference
manual and tutorial. Brigham Young University, Provo, Utah.

Hicks, C.N. 1985. Continuous Simulation of Surface and Subsurface Flows in Cypress Creek Basin, Florida, Using
Hydrological Simulation Program - FORTRAN (HSPF). Water Resources Research Center, University of Florida,
Gainesville, FL.

Ross, M.A., P.O.  Tara, J.S.  Geurink, and M.T. Stewart.  1997. FIPR Hydrologic  Model: Users Manual and
Technical Documentation.  Florida Institute of Phosphate  Research, and Southwest  Florida Water Management
District, University of South Florida, Tampa, FL.

Tsihrintzis, V.A., H.R. Fuentes and R. Gadipudi. 1996. Modeling prevention alternatives for nonpoint source
pollution at a wellfield in Florida. Water Resources Bulletin, Journal  of the American Water Resources Association,
32(2):317-331.
                                                  382

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                                                                        Appendix A: Model Fact Sheets
          XP-SWMM: Stormwater and Wastewater Management Model


Contact Information
XP Software, Inc
2000 NE 42nd Avenue, Suite 214,
Portland, OR, 97213
(888) 554-5022
info(g),xpsoftware.com


Download Information
Availability: Proprietary
http ://www. xpsoftware .com/products/xpswmm. htm
Cost: XP-SWMM2000 is sold as a link/node model; the cost of the software is proportionate to the size of the
project, for which it will be used.


Model Overview/Abstract
XP-SWMM is an enhanced version of SWMM coupled with the XP interface. The graphical EXPERT environment
(XP) is a friendly, graphics-based environment that encompasses data entry, run-time graphics, and post-processing
of results in graphical form. Drainage networks are drawn either on the  screen over real-world  topographical
backgrounds or imported from a database. It has the ability to handle systems comprising pipes and open channels,
rivers, loops, bifurcations, pumps, weirs, and ponds.


Model Features
    •   Watershed hydrology and water quality
    •   Stream transport
    •   Urban stormwater systems and pipes.


Model Areas Supported
Watershed             High
Receiving Water        Medium
Ecological             None
Air                   None
Groundwater           Low


Model Capabilities

Conceptual Basis
The SWMM model simulates overland water quantity and quality produced by storms in urban watersheds. Several
modules or blocks are included to model a wide range of quality and quantity watershed processes. A distributed
parameter sub-model (RUNOFF) describes runoff based on the concept of  surface  storage  balance.  The
rainfall/runoff simulation is accomplished by the nonlinear reservoir  approach. The lumped storage scheme  is
applied for soil/groundwater modeling. For impervious areas, a linear formulation is used to compute daily/hourly
increases in particle accumulation. For pervious areas, a modified Universal Soil Loss Equation (USLE) determines
sediment load. The concept of potency factors is applied to simulate pollutants other than sediment.
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                                                                           Appendix A: Model Fact Sheets
Scientific Detail
In addition to EPA SWMM's Non-linear Runoff Routing, XP-SWMM has 10 additional ways to estimate surface
runoff:

    1.   SCS Unit Hydrographs using a Curve Number with curvilinear unit hydrographs
    2.   SCS Unit Hydrographs using a Curve Number with triangular unit hydrographs
    3.   Kinematic Wave
    4.   Snyder Unit Hydrograph
    5.   Snyder (Alameda) Unit Hydrograph
    6.   Nash Unit Hydrograph
    7.   Santa Barbara Urban Hydrograph
    8.   Laurenson's Non-linear Runoff Routing (RAFTS)
    9.   Rational Method
    10. Colorado Urban Hydrograph Procedure (CUHP)

The model  has more capabilities in infiltration, sub-surface flow, and groundwater flow than that of EPA SWMM.
In addition to SWMM capabilities, pollutant routing is available for all modules, including the Hydraulics layer.
More than 30 types of conduits can be input into the model.


Model Framework
    •   One-dimensional mass balance flow and pollutant routing


Scale

Spatial Scale
    •   Watershed or subwatershed—flexible size


Temporal Scale
    •   Variety of timesteps, including hourly or daily


Assumptions
    •   The model performs best in urbanized areas with impervious drainage, although it has been widely used
        elsewhere.
    •   Model parameters for quantity  and quality simulations are developed such that the model will be calibrated
        to  enhance its capability.
    •   All the pollutants entering the waterbodies are sediment adsorbed.


Model Strengths
    •   Completely interactive analysis engine, allowing the user to change parameters mid-run, pause or terminate
        a run, and to graph results on the fly.
    •   Dynamic memory allocation.


Model Limitations
    •   Not a public domain product.
    •   Lack of subsurface quality routing
    •   No interaction of quality processes
    •   Limited kinetics (A first order decay rate can be specified for each pollutant in the Transport Block.)
    •   Difficulty in simulation of wetlands quality processes
    •   Rudimentary scour-deposition routine in the Transport Block
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                                                                         Appendix A: Model Fact Sheets
Application History
SWMM has been applied to  urban hydrologic quantity/quality  problems in  scores of U.S. cities  as well as
extensively in Canada, Europe, and  Australia.  The model has been used for very complex hydraulic analysis for
combined  sewer overflow mitigation, as well as for many stormwater management planning studies and pollution
abatement projects (Huber, 1992). Warwick and Tadepalli (1991) describe calibration and verification of SWMM on
a 10-square-mile urbanized watershed in Dallas, Texas. Tsihrintzis et al. (1995) describe SWMM  applications to
four watersheds in South Florida representing high- and low-density residential, commercial, and highway land uses.
Ovbiebo and She (1995) describe an application of SWMM in a subbasin of the Duwamish River, Washington.


Model Evaluation
[SWMM or XP-SWMM] is widely applied in Florida, but the applications are primarily limited to urban areas and
event-based applications.


Model Inputs
    •   Data requirements for hydrology depend on the user's choice. Land use data are used to determine ground
        cover type for each model subarea.
    •   Depending on what options are set for the loading calculations additional parameters are necessary (e.g.,
        buildup coefficients would be needed for the dry weather buildup simulation).
    •   Additional data are necessary if the user intends to model snowmelt, subsurface drainage, and interflow.
    •   Depending on the stormwater system, dimensions, slopes, roughness coefficients, elevations, and storage
        are required.


Users' Guide
Available online: http://www.xpsoftware.com/products/xpswmm.htm


Technical Hardware/Software Requirements

Computer hardware:
    •   200 Mb of available disk space
    •   128 Mb of RAM


Operating system:
    •   Microsoft Windows


Programming language:
    •   FORTRAN (model) and Visual Basic (interface)


Runtime estimates:
    •   Minutes to less than an hour


Linkages Supported
EPA SWMM model


Related  Systems
XP-SWMM can optionally run EPA SWMM model.
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                                                                           Appendix A: Model Fact Sheets
Sensitivity/Uncertainty/Calibration
S WMM has a high level of accuracy with careful calibration and sufficient data.


Model Interface Capabilities
    •   XP-SWMM has intuitive graphical dialog boxes.
    •   Data input is subject to expert system filtering and checking.
    •   Storage and retrieval of typical infrastructure attributes such as pipe depths and locations is made easy
        through the user-friendly model interface.
    •   Data entry and model output is in graphical form.
    •   XP-SWMM uses an object oriented  Graphical Expert Environment  in  which the user  can create the
        drainage network interactively on the screen using a mouse and toolbar icons.


References
Donigian, A.S., Jr., and W.C. Huber. 1991. Modeling of Nonpoint Source Water Quality in Urban and Non-urban
Areas. EPA/600/3-91/039. U.S.  Environmental Protection Agency, Environmental Research Laboratory, Athens,
GA.

Huber, W. C.  1992. Experience with the  US. EPA SWMM Model for analysis  and  solution of urban drainage
problems. In Proceedings, Inundaciones Y Redes De Drenaje Urbano, ed. J. Dolz, M. Gomez, andJ. P. Martin, eds.,
Colegio de Ingenieros de  Caminos, Canales Y Puertos, Universitat Politecnica de Catalunya, Barcelona, Spain, pp.
199-220.

Huber, W.C.  2001. New  Options for Overland Flow Routing in SWMM. American Society of Civil Engineers -
Environmental and Water Resources Institute, World Water and Environmental Congress, Orlando, FL.

Huber, W.C., and R.E. Dickinson. 1988. Storm Water Management Model Version  4, User's Manual. EPA 600/ 3-
88/ 00la (NTIS PB88-236641/ AS). U.S. Environmental Protection Agency, Athens, GA.

Ovbiebo, T., and N.  She.  1995. Urban Runoff Quality and Quantity Modeling in a Subbasin of the Duwamish Rivet-
using XP-SWMM. Watershed Management: Planning for the 21st  Century. American Society of Civil Engineers,
San Antonio, TX. pp.320-329.

Tshihrintzis, V. A., R.  Hamid, and H.  R. Fuentes.  1995. Calibration and verification of watershed quality model
SWMM  in sub-tropical urban areas. In Proceedings of the First International  Conference  - Water Resources
Engineering. American Society of Civil Engineers. August 14-16. San Antonio, TX.  pp 373-377.

Tsihrintzis, V.  and  R.  Hamid,  1998. Runoff  Quality Prediction from  Small  Urban Catchments  using  SWMM.
Hydrological Processes. 12 (2), pp. 311-329.

Warwick, J. J., and P. Tadepalli. 1991. Efficacy of SWMM application. Journal of Water Resources Planning and
Management. 117(3):352-366.
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