RETURN TO 1998 ROD AR INDEX
                                                            ?;
           UNITED STATES
           ENVIRONMENTAL PROTECTION
           AGENCY
           Research Report
October 1996
600/R-96/097
           New Bedford Harbor Long-Term Monitoring
           Assessment Report: Baseline Sampling
                                                     SDMS DocID 56373
                                                          Lower Harbor


                                                          Outer Harbor


                                                          Sample Hexagons
                                                   0     2.5
                                                       Kilometers

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                                              Abstract

       This report describes the Long-Term Monitoring (LTM) Plan designed to assess the effectiveness of remedial
activities at the New Bedford Harbor (NBH) Superfund site in New Bedford, MA. Included in this report are an
historical overview detailing man's impacts on the harbor, the long-term plan for monitoring the remediation of the
harbor, and the initial data set  collected prior to remediation to establish the current harbor conditions.  This baseline
data set includes measurements  of  sediment physical characteristics, chemical concentrations, and biological
responses, such as benthic community analysis and sediment toxicity. In addition, data are presented describing PCB
bioaccumulation in blue mussels (Mytilus edulis) and mummichogs (Fundulus heteroclitus).


KEY WORDS:       New Bedford Harbor, Superfund, Monitoring, PCBs, Bioaccumulation, Estuarine
                      pollution.

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                                              Preface
This report describes the Long-Term Monitoring (LTM) Plan developed for the New Bedford Harbor (NBH)
Superfund site in New Bedford, MA, and the baseline data collected as part of this program.  The plan was
developed by the Atlantic Ecology Division (AED), Narragansett, Rl, of EPA's National Health and Environmental
Effects Research Laboratory (NHEERL). This project was initiated as a request for technical support by the U.S.
Army Corps of Engineers, New England Division (COE-NED), Waltham, MA, and EPA's Region I, Boston, MA.
Because of AED's experience in marine monitoring programs, ecological assessments, and specific research efforts
in NBH, the COE-NED and Region 1 requested support to design and implement a state-of-the-art long-term
monitoring program to assess the effectiveness of remediation at this marine Superfund site.

The report is organized as follows: Section 1 provides a brief background of the New Bedford site, including an
historical perspective to show how the area arrived at its present condition as well as the planned remedial activities
to clean it up; Section II is an overview of the long-term  monitoring plan designed to assess how effective the
clean-up is;  Sections 111 and  IV provide the results and a discussion of the 1993 baseline sampling effort which
established the ecological condition before remediation.  Section V provides information on the electronic data.
This report  describes  how and why  specific measurements were made, as well as interprets the data  in an
understandable format.  To that end, most data are displayed in a geographical information system (GIS) format
which is easy to visualize. Also, a glossary of technical terms, shown in bold letters in the text, is included  at the
end of the report. References are provided for those interested in more detail concerning the information provided.
Finally, for  those more technically oriented, a  diskette is  available that  includes both the actual data and
documentation on the procedures used in the NBH-LTM. The diskette is PC-compatible and uses an interactive
Microsoft Windows® format.

This report reflects the efforts of numerous individuals.  The project leader and point-of-contact at AED  is Dr.
William Nelson. Other significant contributors at AED include Barbara Bergen,  Sandra Benyi, Steven Rego,
George Morrison, Charles Strobel, Dr. Glen Thursby, Darryl  Keith, Richard Voyer, Carol Pesch and Dr. Daniel
Campbell. Contract support for GIS and data management at AED  were  provided by Jane Copeland, Harry
Buffum, and Randy Comeleo of Signal Corporation. The points-of-contact for the COE-NED are Joseph Mackay,
Mark Otis, and William Hubbard. The major contractor for  the COE-NED was Normandeau Associates, with
significant contributions by  their sub-contractors, Inchcape  Testing Services and  SAIC.  The EPA Region I
remedial project manager (RPM) responsible for the New Bedford Superfund Project was Gayle Garman  at the
initiation of this project. This role currently is filled by David Dickerson.

The appropriate citation for this report is:

Nelson, W.G., B.J. Bergen, S.J. Benyi, G. Morrison, R.A.Voyer, C.J. Strobel, S. Rego, G. Thursby and C.E. Pesch.
        1996.  New Bedford Harbor Long-Term Monitoring Assessment Report: Baseline Sampling.  U.S.
       Environmental  Protection Agency, National Health  and Environmental Effects Research Laboratory,
       Atlantic Ecology Division, Narragansett, RI. EPA/600/R-96/097

This report is NHEERL-NAR Contribution Number 1792.

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                                               Contents


Abstract  	i

Preface  	ii

Figures  	 v

Tables	vi

Section I: Background  	 1
    Superfund Remedial Activities  	 1
    New Bedford - Historical Analysis of Urbanization and Ecological Effects  	 3

Section II: Long-Term Monitoring Program  	 8
    Goals  	 8
    Endpoints	 8
    Experimental Design 	 9

Section HI: 1993 Baseline Sampling Endpoints and Results 	  12
    Sediment Sampling 	  12
    Sediment Chemistry	  12
       Methods	  13
       Results and Discussion  	  13
    Sediment Toxicity  	  16
       Methods 	  16
       Results and Discussion  	  16
    Sediment Grain Size Distribution  	  18
       Methods	  18
       Results and Discussion  	  18
    Benthic Community Condition  	  18
       Methods	  19
       Results and Discussion  	  19
           Species Richness	  19
           EMAP Benthic Index 	  19
           Benthic Community Structure  	  22
    Bioaccumulation  	  23
       Blue mussels (Mytilus edulis) 	  23
           Methods  	  23
           Results and Discussion	  23
       Mummichogs (Fundulus heteroclitus)  	  25
           Methods  	  25
           Results and Discussion	  25
                                                   in

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Section IV: Associations Between Biological Indicators and Contaminants  	 26
    PCB and Metal Normalization	 26
    Trends Between Biological Endpoints and
       Contaminants	 27
    Sediment Toxicity and Benthic Community Condition	 27
    Future Sampling Recommendations  	 29

Section V: Data Documentation	 31
    Data Format and Availability	 31
    Electronic World Wide Web (WWW) Access	 31

Bibliography	 32

Glossary  	 35
                                                   IV

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                                                Figures
1.  Upper, lower and outer harbor delineations for New Bedford Harbor and Buzzards Bay, MA	2
2.  Number of ships in NBH based on clearance records (pre-1840) and registrations (1840 and later)  	 3
3.  Changes in the New Bedford coastline during the whaling boom from  a) 1800 to 1834 and b) 1834 to 1855 .... 4
4.  Number of textile mills operating in New Bedford from 1850 to 1980	 5
5.  Population growth in New Bedford from 1840 to 1940	 5
6.  Impacts of industrial development and population growth on NBH including a) textile mills and their
    proximity to wetlands and b) the expansion of shellfishing closures	 6
7.  Sampling grid for each of the harbor sections	  10
8.  Molecular configuration of a selected  PCB	  12
9.  Total PCB concentrations (in ug/g dry weight) in NBH sediment 	  14
10. Sediment copper concentrations (in |ug/g dry wt) in upper, lower and outer harbor	  15
] 1. Amphipod survival (in %) in sediment toxicity tests	  17
12. Species richness in the benthic community of NBH	  20
13. EMAP benthic index applied to NBH	  21
14. Dominant benthic invertebrate species in NBH	22
15. Station locations for blue mussel deployments and mummichog collections	  24
16. Total PCBs (as pg/g dry wt of tissue) in blue mussels at three stations in NBH	24
17. Total PCBs (as (jg/g dry wt of tissue) in mummichogs collected from NBH	25
18. Total PCBs plotted against total organic carbon in sediment for all stations in NBH	  26
19. AVS normalization (divalent metals  - AVS) in (jmol/g dry weight for each harbor area	  27
20. Co-location of total PCBs (measured as sum of 18 congeners in ng/g dry wt) and total metals
    (measured as sum of all metals analyzed in pmol/g dry weight) 	  27
21. Total count of benthic species by station compared to a) total PCB concentrations and b)  total metals	28
22. Amphipod survival plotted against a) total PCBs and b) non-divalent metals  	  28
23. The EMAP benthic index plotted against amphipod survival, as a percent of control survival	  29

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                                               Tables
1.  Endpoints measured in the NBH-LTM program	 11
2.  Average metal and total PCB concentrations (in ug/gdry wt) in the upper, lower and outer harbor
   sediment.  N is the number of stations in the segment	 16
3.  Health measures and average contaminant concentrations in compartments I, II and III	29
                                                  VI

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                                       Section I: Background
Superfund Remedial Activities
The introduction of anthropogenic contaminants into the
environment has produced numerous hazardous waste sites
throughout the United States.  These sites are located on
land and in both freshwater and marine locations, and pose
varying degrees of risk to  both  human  health and the
environment. The worst of these areas are listed on the
Environmental  Protection  Agency's  (EPA)  National
Priorities List (NPL) for cleanup under  CERCLA and
SARA (Superfund) legislation. Currently, there are more
than  1,200 Superfund sites; slightly over 200 of which
have completed remediation.

New Bedford Harbor  (NBH), located in southeastern
Massachusetts, is  a Superfund site currently on the NPL
primarily due to sediment contamination by polychlorinated
biphenyls  (PCBs).  In order to most effectively monitor
remedial activities in NBH, it was separated into three
segments:  the upper, lower and outer harbors (Figure 1).
Sediment  concentrations as high as  100,000 parts per
million (ppm) have been measured in some parts of upper
NBH. These organic compounds were manufactured for
over 40 years and used in transformers and other electronics
applications  in  New  Bedford    because   of  their
advantageous physical  and  chemical properties.  While
useful in the electronics industry, subsequent human health
and ecological studies have demonstrated that PCBs have
adverse effects on plants and animals (Connolly,  1991;
Miller etal., 1991).  Approximately 18,000 acres of NBH
and adjacent Buzzards Bay have been closed to commercial
and recreational fishing because PCBs have accumulated in
the food chain.   Based on human health  concerns and
ecological risk assessments,  the decision  was made to
remove PCB-contaminated sediments from the harbor.

A pilot study was initiated in 1987 to examine dredging and
disposal options for NBH contaminated sediments. The
results indicated that dredging was feasible both from an
engineering perspective (i.e., sediments could be removed
with  minimal  resuspension)  and   an   environmental
perspective (i.e., remediation did not cause unacceptable
ecological damage; Nelson and Hansen, 1991). Based on
this pilot study, a Record of Decision (ROD) was signed in
1990  to remove approximately  10,000  yd3 of the most
PCB-contaminated sediment (greater than 4,000 ppm) in
the upper harbor, termed the "Hot Spot". This activity was
completed in the  fall  of  1995.  Subsequent  RODs will
describe  the  removal of  additional  PCB-contaminated
sediments from other areas of the harbor and Buzzards Bay.
The remediation of Superfund sites can be very expensive.
Therefore, it is important to assess the effectiveness of the
remediation process and to  document the environmental
benefit  gained for the money spent.  One method for
accomplishing this is to monitor the site before and after
remediation.   Because Superfund  sites can be quite
different, both with respect to types of contaminants (e.g.,
PCBs, metals, dioxins) and  physical characteristics (e.g.,
land,  streams, estuaries), there is  no all-encompassing
monitoring blueprint.  However,  certain  elements are
characteristic of any well-designed monitoring effort. First,
specific  environmental goals  must be clearly articulated and
understood prior to  designing an  effective  monitoring
program. Second, the monitoring program should provide
the information necessary for managers and/or scientists to
make site-specific assessments of whether or not the goals
were attained. Finally, the experimental design should be
both  statistically  rigorous   to  allow  for  quantitative
assessments and flexible enough to accommodate changes
over time.  Each of these elements were incorporated into
the  long-term  monitoring  program   to  assess  the
effectiveness  of  the NBH Superfund site remediation.

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NBH Long-Term Monitoring Program
                                                                      Upper Harbor

                                                                      Lower Harbor

                                                                      Outer Harbor
Buzzards Bay
 Figure 1. Upper, lower and outer harbor delineations for New Bedford Harbor and Buzzards Bay, MA. The hurricane barrier is
 the boundary between NBH and Buzzards Bay.

                                              2

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                                                                                                /: Background
New Bedford - Historical Analysis of
Urbanization and Ecological Effects
The current ecological condition of New Bedford Harbor,
or any other estuary, reflects the cumulative effects of
natural  and anthropogenic  impacts.   This historical
assessment of the development and urbanization of the New
Bedford    area   offers   insights    into
some factors which influenced ecological changes in NBH.
It is included in this report to provide a perspective on how
the area became a Superfund site. Sources of information
used  in  this  analysis include  property  surveys,  U.S.
Geological  Survey  (USGS) maps,  written historical
accounts of the New Bedford area,  personal interviews,
census records, and information from fishing, industrial,
public health and economic reports.

Review of the available information reveals four sequential
developmental periods, each of which exerted a distinctive
effect on estuarine conditions. During the early settlement
period (ca. 1676 to 1750),  agriculture was  the basis of
inhabitant employment and livelihood. Settlers in the New
Bedford area employed farming practices typically used by
Europeans throughout New England; they cleared, fenced,
and cultivated the land (Cronon, 1983). In New Bedford,
by the time of the American Revolution, a portion of the
once  "noble"  forest had been  replaced  by cornfields,
meadows  and pastures  (Ricketson,  1858).   Timbering
probably resulted  in  an increase in  water  runoff  and
erosion, with  a  concomitant loss of soil and nutrients.
Livestock were  important to early  Europeans in  New
England as  a food source,  as work animals, and as a
marketable commodity. Records show that by 1771 settlers
along the Acushnet River owned sheep, swine, horses, oxen
and cows (Hegarthy, 1959).  The close cropping feeding
behavior of these animals presumably contributed to the
erosion of soil and its nutrients.

'"he population in the area during this  time period was low.
Results of a land survey indicated 11 families owned 23
parcels of land in 1690. The population has been estimated
at 500 persons in 1790 and 700 in 1795 (Ricketson, 1858).
The  latter population figure, in terms of the total  area of
New Bedford (ca. 19 sq. mi.), suggests that the population
density during the agricultural period probably did not
exceed  36 persons per  sq.  mi.   Although early  settlers
altered the New Bedford  landscape, neither the degree nor
the significance of their impact is clear.  Certainly, the low
population density ameliorated consequences  due to
farming practices.

The second developmental period began with the advent of
   4001
     1750  1770  1790  1810  1830 1850  1870  1890  1910
                          Year
Figure 2.  Number of ships in NBH  based on clearance
records  (pre-1840) and  registrations (1840  and  later)
(Ricketson, 1858; Tower, 1907).
the whaling industry  in New  Bedford.  The  number of
vessels using the harbor progressively increased from two
or three vessels committed to near-shore whale hunting
around 1750 to 329 involved in the international whale
trade in 1857 (Figure 2).  By 1830,  New  Bedford had
become the world's leading  whaling port and by 1845 it
was the fourth leading tonnage (vessels) district in the U.S.
behind New York, Boston and New Orleans.

As a result of this increased maritime commerce in New
Bedford,  wharfs  were  constructed  to  accommodate
expanded harbor usage. An early map (Leonard), together
with a verbal description of the area (Ellis, 1892), suggest
the location of the original, pre-1800 shoreline (Figure 3a).
The number of wharfs built increased from 7 in 1807 to 19
in  1851  and significantly  changed  the  shape of the
shoreline (Figure 3b).

Wharf construction had a direct and immediate destructive
impact on near-shore habitats. A harbor survey conducted
by Army engineers indicated that the presence of wharfs,
along with  a  bridge  connecting New  Bedford  and
Fairhaven, constricted  the  river  channel  between the
mainland and Fish Island (Dutton, 1853).  This survey
revealed that a portion of the ebb flow previously passing
through this channel was diverted through a second channel
east of Fish Island.  This  diversion resulted in increased
sedimentation in the  mainland-Fish Island channel and
along the north shore of Fish Island (Figure 3b). Water that
continued to flow past the mainland was deflected to the
southeast by the  presence of wharfs.  As it mixed with
water passing through the channel east of Fish Island,
eddies formed and sedimentation  increased on the  south
shore of Fish  Island.    Therefore,  changing   water

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NBH Long-Tenn Mnnilorir.g Prograi.

                          A
                 1800-1834
     H  Pre-1800 Coastline U Pre-1800 Land
     H  1834 Coastline     • 1834 Gain in Land
     A"  New Bedford/Fair   0 1834 Loss in Land
        Haven Bridge
            1834-1855
V  1834 Coastline
H  1855 Coastline
A"  New Bedford/Fair
   Haven Bridge
1834 Land
1855 Gain in Land
1855 Loss in Land
Figure 3. Changes in the New Bedford coastline during the whaling boom from a) 1800 to 1834 and b) 1834 to 1855,

                                              4

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                                                                                                  /.- Background
    40-,
                                                          150-,
     1850
                                            1970
 Figure 4. Number of textile mills operating in New Bedford
 from 1850 to 1980.
movements and  sedimentation patterns due to whaling-
related construction projects also affected benthic habitats.
The  third developmental  period  began with the initial
success of the WamsuttaMill (ca. 1850).  The number of
textile mills in New Bedford increased dramatically after
1870  (Figure 4).  Mills were constructed along the shore
north and south  of  the city center in areas of wetlands,
impacting virtually all of the wetland habitats on the west
shore of the Acushnet River and in Clark's Cove (Figure
6a). As the textile business expanded, the city's population
increased also, from about 20,000 in 1870 to 120,000 in
1920 (Figure 5).  At  the time, human wastes typically were
discharged directly  into estuarine waters; therefore,  the
release of sewer sludge, pathogens  and nutrients to  the
Acushnet River, and eventually Clark's Cove, increased
commensurate with  population expansion.  Because New
Bedford  is situated  on an ascending slope, virtually all
sewage-associated   nutrients  flowed  into  surrounding
estuarine waters.  The increase in the volume of wastes
generated was sufficiently  large that dredging equipment
was required  to remove sludge from points of discharge
(1880 Census, 1881).  Thus,  in addition  to the loss of
habitat and related natural resources due to the intentional
filling of wetlands, benthic habitats also were affected by
discharged sewer  sludge.   Also, the consumption of
contaminated  shellfish led to outbreaks of typhoid fever and
the closure of shellfish beds in 1904 (Figure 6b).  The loss
of this shellfishing resource is estimated to represent a total
economic activity of about $13 million (Hauge, 1988).

In the 1920s  and 1930s, the collapse of the local cotton
textile industry due  to mill closures and the impact of the
general economic depression of that time, affected 50% of
New  Bedford's  population  (Wolfbein,   1968).   This
                                                            1840
             1860
1880     1900
    Year
                                                                                              1920
                                              1940
Figure 5. Population growth in New Bedford from 1840 to
1940
represented the beginning of a fourth developmental period:
fishing  and industrial  development.  Expansion of the
fishing  industry became possible with the installation of
dock-side  refrigeration, and  New Bedford  residents
returned to the sea for their livelihood. Over time, the size
of the fishing fleet increased.  Protection  of this fishing
fleet was the primary factor for constructing the hurricane
barrier in 1964.  This further restricted flushing rates and
altered flow patterns within the  harbor.  Also during this
fourth  developmental  period,  significant  economic
inducements, including relocation expenses, favorable tax
policies, and low rental fees,  were offered by the city of
New  Bedford  to  encourage  businesses to move  there
(Wolfbein,  1968).   Additional  manufacturing  benefits
included a large semi-skilled and unskilled female labor
force, a comparatively  low hourly wage  scale, and ample
space in vacant mills.   Perhaps more  importantly,  the
Industrial  Development  Division  of  the   Board   of
Commerce  exhibited  a favorable  community attitude,
encouraging manufacturers to relocate to  New Bedford.
For these reasons New Bedford was well-suited as a site for
the manufacture  of "static"  (e.g.,  capacitors,  resistors,
transformers) electronic components (Estall, 1966).

Aerovox Corporation   and  Comell-Dubilier  were two
electronic component  manufacturers persuaded by  the
Industrial Development Legion, successor to the Industrial
Development Division, to open factories  in New Bedford.
Aerovox moved to New Bedford in 1938  (Standard Times,
June  7,  1939),  followed by  Comell-Dubilier in  1941
(Standard Times, March  3,  1941).    Both  companies
produced capacitors and were significant contributors to the
war effort. PCBs were used by these manufacturers in the
production of electronic capacitors.  PCB usage in New

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NBH Long-Term Monitoring Program
                                                                             B
                                                                       Shellfish Closures
          1919 Coastline
          1919 Textile Mil Is
1844 Wetlands
D dosed in 1904
0 Closed in 1949
d Closed in 1995
CJ Provisional in 1995
- Restricted in  1995
Figure 6. Impacts of industrial development and population growth on NBH including a) textile mills and their proximity to
wetlands and b) the expansion of shellfishing closures.

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                                                                                                 /: Background
Bedford peaked at about 2 million pounds per year during
the years of 1973, 1974 and 1975 (Weaver, 1982). The
same properties (e.g., chemical stability and low solubility)
that make PCBs ideal for industrial use also allow them to
persist  in   the  environment.    The  extensive  PCB
contamination in  NBH, detected in the mid 1970s,  has
controlled planning, development and economic restoration
of the New Bedford area ever since.

In summary, this  historical perspective documents  the
conscious decisions directing the economic activities of the
New Bedford area that have had dramatic effects  on its
ecological condition. One consequence of PCB  use during
the fourth  developmental  period  is  severe  sediment
contamination in NBH. Activities are underway currently
to remediate these  sediments. The remainder of this report
describes the program designed to document how effective
remedial activities will be over time, as well as to define
baseline conditions prior to beginning the remediation.

The following section describes the 30-year NBH Long-
Term Monitoring (NBH-LTM) program that was designed
to quantify spatial (throughout the harbor) and temporal
(over  time  as  various  phases  of the remediation are
completed) environmental changes as a result of remedial
activities in NBH. Specifically, it contains the goals for the
NBH monitoring program, a summary of the data necessary
to address these goals, and the experimental design used to
collect,  synthesize, and present the results.  Section III
provides specific examples  of  the baseline monitoring
results collected prior to the initiation of remedial dredging.
This is  the data set  against which  future  spatial  and
temporal changes will  be compared.

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NBH Long-Term Monitoring Program
                          Section II: Long-Term Monitoring Program
Goals
The key to a successful monitoring program is the clear and
concise statement of the goals.  This is especially important
because of the 30-year duration of this program. Once the
goals are clearly  stated,  the appropriate data can  be
identified to address those goals.

In the case of NBH, the primary goal is  to: "assess the
effectiveness of the remediation by quantifying spatial and
temporal biological  and chemical changes  in different
environmental compartments."  A  secondary goal  is to
show  compliance  with  applicable  or   relevant   and
appropriate requirements (ARARs), a  requirement at all
Superfund site remediations.  In this case, two of the  most
important ARARs for measuring remedial  success are
water quality standards and Food and Drug  Administration
(FDA) standards for PCB levels in  seafood.  While the
statement of these two goals may seem simplistic, it is
necessary for the selection of appropriate endpoints and
experimental design.

Endpoints
With the goals  stated explicitly, the  next step  was to
identify  the types of information required (ecological
endpoints) to  address these  goals quantitatively.   The
approach was to first define the broad ecological areas (i.e.,
compartments) of interest in this monitoring program: the
sediment, the water column and the wetlands. Within each
compartment,  specific physical, chemical, and biological
endpoints were selected and quantified.  The primary focus
of this monitoring program is the sediment because it is the
main repository  for PCBs  and  other  contaminants.
Therefore, sediment concentrations of PCBs and  nine
metals were quantified. Toxicity tests also were conducted
to ascertain the short-term acute effects of the sediments on
the  biota.    In  addition,  the  benthic invertebrate
community was characterized to determine the longer-term
chronic effects of contaminants on the  biota.  Finally,
several  other factors such as sediment grain size,  total
organic carbon (TOC) and acid volatile sulfide (AVS)
were measured.   These  factors  can effect chemical
availability to  the  biota  and also are important when
interpreting the biological effects data.

A second compartment of interest is the overlying water in
NBH. While the highest PCB and metal concentrations are
in  the sediments, these contaminants are present in the
water column also. They are transported to other areas of
the harbor  and Buzzards  Bay, and  are subsequently
accumulated by organisms such as filter-feeding shellfish.
Water column concentrations can be measured directly or
indirectly.   For direct  measurement, a water sample is
collected and analyzed at a single point in time. However,
in  NBH, water column concentrations can vary from one
day to the next and from one area to another depending on
tides and weather conditions, especially wind speed and
direction. Therefore, direct measurements are subject to
potentially  large  spatial and temporal variations.   In
addition, water column concentrations  can be very low,
requiring large volumes of water  to  be  collected for
analysis.

One  indirect  method  to  quantify   water  column
concentrations  is biomonitoring,  in  which  organisms
accumulate and integrate contaminant concentrations over
time. This method has been employed extensively in other
monitoring programs (CEAS, Mussel Watch, NOAA Status
& Trends). For the NBH-LTM Program,  bioaccumulation
in the blue mussel, Mytilus edulis, was the method selected
to  quantify  PCB water column concentrations.   This
approach has several advantages over direct water column
measurements.  First, because mussels filter water almost
continuously,  they provide an integrated assessment of
water column concentrations over time.  Second, because
they accumulate  PCBs in  proportion  to water column
concentrations, it is  possible to estimate water column
concentrations from tissue residues (Bergen et al., 1993)
and compare those values with water quality standards.
Finally, mussels accumulate PCBs 100 to 1000 times that
of the water column. This improves  the accuracy of low-
level contaminant quantification. Through several previous
monitoring and research efforts in NBH, an extensive data
set has  been  compiled on  PCB  accumulation in  blue
mussels (Bergen et al.,  1993; Nelson et  al., 1995). These

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                                                                                               //: LTM Program
data provide a baseline so that changes in water column
concentrations resulting from remedial activities  can be
assessed.  The mummichog, Fundulus heteroclitus,  was
selected  as   another  species  to  quantify  PCB
bioaccumulation within NBH. This fish feeds near wetland
areas, remains localized instead of migrating throughout the
estuary, and has been found to accumulate PCBs  to high
concentrations within NBH.

A final compartment of concern is the wetlands.  Two
aspects of the  wetlands  will  be quantified over time:
contamination and functionality.  Because only a very small
section of wetland area is scheduled for remediation,
changes  are not  expected to  be  dramatic or  rapid.
Therefore, a comprehensive wetlands  assessment will be
completed at 10-year intervals and compared to a baseline
assessment.  This will occur as a separate wetlands survey
program and is outside the scope of this report.

Experimental Design
As stated previously, the goals of a monitoring program
should dictate the experimental design used.  For this
monitoring program, the goal  is to quantify spatial and
temporal  biological  and  chemical changes  in different
environmental  compartments  resulting  from  remedial
activities.  Therefore, the experimental design must be
flexible enough to quantify  both  spatial and temporal
changes in the endpoints.   In order to accomplish this, a
probabilistic sampling design was utilized. This type of
design is characterized by applying a systematic hexagonal
grid to an area to select sampling points.  The result is a
design that is unbiased and statistically rigorous, meaning
it can  be  used to  make quantitative statements about the
spatial and temporal changes within the sampling areas. A
biased sampling  design, in which  sampling points are
selected based on preconceived locations of problem areas,
cannot be used to make assessments  of  the entire area.
Because the goal of this program is to quantify changes
throughout NBH due to remediation, an unbiased sampling
design was required.

In NBH, remedial activities will not be the same throughout
the entire harbor.  For example, in the area north of the
Coggeshall  St.  Bridge (termed the upper harbor in this
program, Figure 7) two separate remedial activities will be
conducted.  The "Hot Spot" remediation, to remove PCB-
contaminated sediments with concentrations greater than
4,000 ppm, was completed in the fall of 1995. A future
remedial operation will occur to remove other contaminated
sediments in the  upper harbor.   The area between the
Coggeshall St. Bridge and the hurricane barrier (termed the
lower  harbor  in this program, Figure 7) will  have a
relatively small area of sediment remediated. Likewise, the
area from the hurricane barrier to the outer closure line
(termed the outer harbor in this program, Figure 7) will
have a relatively small area remediated. Because different
remedial activities are planned within each area  of the
harbor, spatial and temporal changes within each of these
areas, and the  entire harbor,  needed  to  be  quantified
separately. To accomplish this, the hexagon  size in the
sampling grid was adjusted to  include approximately 30
stations per segment (Figure 7).  This sample size  allows
quantification of the  areal extent and magnitude of changes
in each endpoint within each area. A full suite of endpoints
was measured at each station (Table 1).

With this programmatic framework in mind, the rest of the
report will focus on the results of the first sampling effort,
completed in the fall of 1993.  These  results are the
baseline against which future monitoring results will be
compared. Section III is  divided into separate parts for
each of the major categories of endpoints measured. Each
provides an introduction and a brief discussion of methods
and results. In-depth analyses of these data are beyond the
scope of this  report.  Detailed analyses of the data will be
provided in additional peer-reviewed manuscripts.  Future
sampling events  will  be  dependent upon the ongoing
remedial activities, as well as the endpoint to be measured.
Full-scale sampling will occur before and after other major
remedial activities, or on a 3 to 5 year time frame when all
remedial activities are concluded. For example, dredging
of the  "Hot Spot" was completed in  the fall of 1995, at
which   point a full  sampling  of all parameters  was
conducted. The next full-scale sampling is anticipated to
occur in 1999,  immediately prior to the start of the next
major  dredging activity phase (ROD 2).  Smaller scale
monitoring activities will occur more frequently. Because
water column concentrations are expected to change faster
than sediment  concentrations,  due to flushing and tidal
exchange, mussel bioaccumulation will be monitored twice
each year.

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NBH Long-Term Monitoring Program
                                                                       Upper Harbor

                                                                       Lower Harbor
                                                                       Sample Hexagons
 Figure 7. Sampling grid for each of the harbor sections.  Each section was overlaid with a grid that defined approximately 30
 hexagons.
                                                10

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                                                                                                   //: LTM Program
Table 1. Endpoints measured in the NBH-LTM program.

                                           Endpoint
                                                 Measured as: *
Sediment Chemistry
Bioaccumulation
acid volatile sulfide (AVS)
arsenic
cadmium
chromium
copper
mercury
nickel
lead
selenium
zinc
PCBs (18 individual congeners)
Total PCBs
total organic carbon (TOC)

blue mussel (Mytilus edulis)
mummichog (Fundulus heteroclitus)
Sediment Characterization  A.  abdita sediment toxicity tests  (acute toxicity)
                         grain size and texture
                         benthic community (chronic effects)
umol AVS/ g dry weight sediment
ug As/ g dry weight sediment
ug Cd/ g dry weight sediment
ug Cr/ g dry weight sediment
ug Cu/ g dry weight sediment
ug Hg/ g dry weight sediment
ug Ni/ g dry weight sediment
ug Pb/ g dry weight sediment
ug Se/ g dry weight sediment
ug Zn/ g dry weight sediment
ug PCB congener/ g dry weight sediment
sum of  18 PCB congener concentrations
g C /100 g dry weight sediment (%)

ug Total PCB/ g dry weight tissue
ug Total PCB/ g dry weight tissue

survival as a % of control survival
% silt/clay  (< 63 urn)
% sand (> 63 urn and < 2 mm)
% gravel (> 2 mm and < 64 mm)
species richness
EMAP benthic index
species dominance
*ug/g is equivalent to ppm
                                                        11

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NBH Long-Term Monitoring Program
                  Section III: 1993 Baseline Sampling Endpoints and Results
Sediment Sampling
While the procedures used to quantify individual endpoints
were different, sediment collection was identical at each of
the study's sampling sites (U.S. EPA, 1995). Sediment was
collected  using  a Young-modified  van Veen  grab
sampler (440 cm2 in surface area). At each site, numerous
grabs were  collected  for  chemical  and  toxicological
analyses. Only the top 2 cm of these grabs were used in the
composite  for  chemical analysis in  this  monitoring
program,   even   though  greater  concentrations  of
contaminants may have been  present  deeper in  the
sediments. The rationale for using just the top 2 cm is that
this program is designed to quantify changes over a 30-year
time frame,  especially changes resulting from  remedial
activities.  Because the upper 2 cm are most reflective of
current sediment concentrations,  including  older, deeper
sediments could  produce a distorted interpretation of
current conditions.  Other sediment monitoring activities in
NBH, associated with the remedial dredging activities, do
quantify concentrations at multiple depths to ensure that all
the contaminants are removed.

From each  individual grab a 2-cm deep sample was
removed for AVS analysis. The remainder of the surficial
layer (top 2 cm)  from  each  grab at a given site was
composited and  homogenized.  From this  homogenized
composite, sub-samples were taken for chemistry (PCBs,
TOC, metals), sediment toxicity and grain size analyses.
Prior to  laboratory analysis,  PCB and  TOC sediment
samples were kept cold (4°C), while the metals and AVS
samples were frozen. Sediment for toxicity testing was
taken from the same composite, press-sieved through a 2-
mm mesh stainless-steel screen, thoroughly homogenized,
and stored at 4°C until testing.  Finally, approximately  100
ml of the composited sediment were collected and placed
in a polyethylene bag for grain size analysis.

Three additional grabs  were collected at  each site for
benthic community  description.  These grabs were  a
minimum of 7 cm deep  in  order to be reflective of the
benthic community. Each grab was processed according to
the procedures  described in Reifsteck et al.  (1993).  A
small core (2 cm diameter) was taken from each grab for
sediment grain size characterization, independent of the
grain size analysis for the chemistry composite described
previously.  The remaining sample was sieved through a
0.5 mm screen using a backwash technique  to minimize
damage to soft-bodied animals. Samples were preserved in
a buffered 10% formalin and seawater solution with rose
bengal added as a vital stain.

Sediment  Chemistry
The primary goal of the remedial activities in NBH is to
remove PCBs and other col located contaminants; therefore,
quantification of these contaminants is one  of the most
important aspects of the NBH-LTM program.  PCBs are a
class of organic contaminants made up of 209 congeners.
Each PCB congener has one to ten chlorine atoms attached
in a unique molecular arrangement (Figure 8).
       Cl
Figure 8.  Molecular configuration of a selected PCB. This
specific congener (CB077) is coplanar. The position of the
chlorine atoms around the phenyl rings determines the shape
of the molecule. Each ring can have up to five chlorine atoms.
As the level of chlorination increases, the solubility of the
congener  in  water decreases  and  its particle affinity
increases. For many years, PCBs were quantified as total
Aroclor®. The term Aroclor® is a trademark used by the
Monsanto company to refer to mixtures of PCB congeners.
Depending upon the analytical method used to quantify
Aroclors, specifically, which chromatographic peaks are
selected  to  represent the  Aroclor®  mixture, different
laboratories could analyze the same sample and get highly
                                                     12

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                                                                                           ///. Baseline Sampling
variable concentrations.  In contrast, congener-specific
analysis is more  accurate because standards for single
congeners can  be made easily and  standard  reference
materials with congener-specific totals are readily available
for quality assurance  purposes.   For this  reason, the
sediments in the NBH-LTM program were analyzed for 18
of the 209 PCB congeners, rather than Aroclor® content.

In addition to measuring PCBs, the TOC in the sediment
was  quantified because it can  affect the availability of
organic compounds, such as PCBs, to biota  (Connell,
1990). The organic carbon in sediment can bind chemicals,
thus   making the  chemicals  inert to  organisms.   For
example, sediment A and sediment B can have exactly the
same total PCB concentration. However, if sediment A had
high TOC concentrations and sediment B had  low TOC
concentrations, organisms in sediment B would be exposed
to more PCBs. One procedure to determine the amount of
PCBs actually available to an  organism is to normalize
them to TOC content.

Although  sediment PCB concentrations are the primary
source  of concern  in NBH, metals are present  in high
concentratrations in some areas of NBH.  Because one goal
of  the remediation  is   to  remove  these  collocated
contaminants, sediments  were analyzed for metals also.
Nine metals were selected for analysis including: copper,
cadmium,  lead, zinc, arsenic, selenium, mercury, chromium
and nickel. Although not all of these metals are present in
high concentrations in NBH, they were quantified because
there are existing water quality criteria for each of them.

In addition to these nine metals, sediment samples were
analyzed for AVS content.  Like TOC for PCBs, the
bioavailability of divalent metals is controlled, in part, by
the amount of AVS in the sediment.

Methods
For  PCB  analysis, approximately  1  g of  sediment was
extracted with acetone and methylene chloride. Extracts
were solvent-exchanged to hexane and analyzed on a gas
chromatograph.  Extracts were analyzed for 18  individual
PCB congeners.  Total PCB concentrations were calculated
as the sum of these 18 congeners. As part of this analysis,
a second gram of sediment was weighed, dried and weighed
again to determine moisture content.  The analysis of TOC
consisted  of first removing the inorganic  carbon from
carbonates and bicarbonates by acid  treatment.  Organic
compounds then were broken  down by burning in the
presence of oxygen or air and the resultant carbon dioxide
measured by direct non-dispersive infrared detection.
Sediments  were analyzed  for metal  concentrations by
sonicating a mixture of approximately 5 g of sediment and
2M nitric acid. The resultant extract was brought to volume
and analyzed on an inductively coupled plasma spectro-
photometer  (ICP) or an atomic  absorption spectro-
photometer (AA) as  necessary.  Total metals, used for
comparison  with biological responses, is defined as the
molar sum of all metals measured (using the 2M nitric acid
extraction).  A sum of divalent metals was calculated to
estimate bioavailable metals.  The metals included in this
calculation were Ni, Pb, Cd, Cu, Zn and Hg.  Because a
weaker  acid is used for the total metal extraction than for
traditional metal extractions, the metal concentrations are
more indicative of anthropogenic inputs and exclude metals
in the mineral portions of the sediment.

AVS was quantified as the amount of sulfide released upon
extraction of the sediment with a cold 1M hydrochloric acid
(HC1) solution. The sulfide liberated in this process was
trapped  and measured  with a sulfide-specific electrode.

Results and Discussion
In general, total PCB concentrations  decreased  along a
gradient from the upper to the outer harbor (Figure 9), with
sediment concentrations ranging from a high of 431 pg/g in
the upper harbor to 0.02 pg/g in the  outer harbor.  The
organic  carbon in the sediments ranged from a high of 13%
in the upper harbor to  a low of 0.16% in the outer harbor.

Metal concentrations generally decreased from the upper to
the outer harbor; however, the gradient was not as distinct
as the one observed for total PCBs (Table 2). For example,
sediment copper concentrations were elevated in the upper
harbor near the cove located to the north and west of the
Coggeshall St. Bridge, while in the lower harbor, copper
was elevated near several  industries, Popes  Island and
several marinas (Figure 10).  AVS was variable  throughout
the harbor, although the highest concentrations were found
in the upper and lower  harbors (112 pmol/g) and the lowest
concentrations (0.1 pmol/g) were observed in the outer
harbor.
                                                     13

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NBH Long-Term Monitoring Program
                              UPPER
       0   250  500
          Meters
                     LOWER
0   500   1000
   Melrrs
                              OUTER
                      O     25OQ    5000
                           Meters
 Total PCB Concentrations
         (ug/gdry wt)
                                                              > 100

                                                             51-100

                                                             11-50

                                                             1-10

                                                             < 1
 Figure 9. Total PCB concentrations (in (jg/g dry weight) in NBH sediment. Total PCBs are the sum of the 18 individual
 congeners analyzed.
                                         14

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                                                                    ///: Baseline Sampling
                            UPPER
       0   250  500
                    LOWER
0   500  1000
   Meters
                            OUTER
                     0     2500    5000
                         Meter*
  Copper Concentrations
        (ug/g dry wt)
                                                       > 1000
                                                       501-1000
                                                       101 -500
                                                       11-100
                                                       < 10
Figure 10. Sediment copper concentrations (in ug/g dry wt) in upper, lower and outer harbor.
                                      15

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 NBH Long-Term Monitoring Program
Table 2.   Average metal and total  PCB concentrations  (in
ug/gdry wt) in the upper, lower and outer harbor sediment. N is
the number of stations in the segment.
Average
Concentrations
(ug/g dry wt)
Metals
As
Cd
Cr
Cu
Hg
Ni
Pb
Se
Zn
Total PCBs
Upper
Harbor
N=27

5.2
67
310
630
0.43
34
270
0.32
630
44
Lower
Harbor
N=27

5.3
12
190
450
0.40
11
130
0.42
260
8.2
Outer
Harbor
N=23

3.1
0.28
19
19
0.07
5.3
18
0.23
42
0.83
Sediment Toxicity
Sediment toxicity tests are often used in ecological and
contaminant assessments,  and in  monitoring programs,
because they integrate the biological effects  of complex
mixtures.   Laboratory toxicity  tests have gained  wide
acceptance  and  become  an  essential  component  of
programs  designed to  establish  relationships between
chemical contamination and ecological effects (Swartz,
1987).  Finally, sediment toxicity  testing can be used to
augment chemical analyses which are unable to address
issues  of  bioavailability  due to  chemical-to-chemical
interactions and  the  absorption affinities of sediment
particles (U.S.EPA, 1989).

The euryhaline benthic amphipod, Ampelisca abdita, the
test species for this project, has been used routinely for
sediment  toxicity tests in support  of numerous  EPA
programs. It ranges from Newfoundland to Florida and the
Gulf of Mexico. This tube-dwelling amphipod  constructs a
soft, upright, membranous tube 3 to 4 cm long in fine-
grained sediments, from the intertidal zone to a water depth
of 60  meters.  A. abdita ingest either surface-deposited
particles or particles in suspension, and respire overlying
and interstitial waters. It is a sensitive species and has
formed the toxicological basis for EPA research on the
availability  of metals  in  relation  to  AVS  in  marine
sediments (Di Toro et al.,  1990).  A. abdita was the first
species used to demonstrate the toxicity of sediments from
NBH,  and  subsequently  was  used  to  assess  the
effectiveness of capping procedures as part  of the Pilot
Dredging Project on-site remediation techniques (Otis and
Averett, 1988). Thus, it is appropriate that this species be
used  during the NBH-LTM as one  of the indicators to
assess the effectiveness of remedial activities.

Methods
Sediments  were added to exposure  chambers one  day
before the amphipods.  The exposure  chambers were 1-L
canning jars with an inverted glass dish as a cover.  Two
hundred ml of control or NBH sediment were placed in the
bottom of each of five replicates per sediment sample and
covered with approximately 600 ml of seawater. Aeration
and  lighting  were continuous  during  the  10-day test.
Twenty subadult amphipods (passing through a 1.0 mm,
but retained on a 0.71  mm screen) were added randomly to
each replicate chamber. Following EPA procedures (U.S.
EPA, 1994), amphipods were exposed to test sediments for
10 days under static conditions.  Salinity ranged from 30 to
35 parts per thousand (ppt) and temperature was maintained
at 20 ± 1°C.   In addition  to NBH sediments, additional
performance  control  sediments were  used to assess the
survival  of  amphipods  under a  set  of  standardized
conditions.

Results and Discussion
A total of 77 sediment samples (27 from both the upper and
lower harbors, and 23 from the outer  harbor) were tested
with A. abdita.  The  samples  were divided among  five
different test series, each with its own performance control
with Long Island Sound sediment. By  measuring survival
relative to a control treatment, non-contaminant effects can
be separated from contaminant effects. The amphipod
survival in performance control sediments for the five tests
ranged  from  89 to 99%.  Because survival in the NBH
samples was examined relative to control treatments, it is
possible to have percent survival numbers greater than
100%.  For  example,  if control survival was 95% and
survival in a NBH sample was 100% then the  sample
survival  would  be 105% (100/95).   The U.S.  EPA's
Environmental  Monitoring  and  Assessment Program
(EMAP) considers sediments with survival less than 80%
to be toxic, and less than 60% to be very toxic (Strobel et
al., 1995). Samples with survival less than 10% are so
poisonous that there is no way to tell exactly how bad they
are without diluting and  re-testing them.  Survival for
animals exposed to the 77 NBH samples ranged from 0 to
 109% of the control.  Thirty-four samples (approximately
45%)  had survival less  than  or equal to 80% of the
performance control survival. Twenty-two (approximately
30%) samples had survival less than or equal to 60% of the
performance control.  All except one sample considered to
be toxic or very toxic were confined to either the upper or
lower harbor (Figure 11).  Average percentage survival for
the upper and lower harbors was similar at 55% and 66%,
                                                     16

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                                                                    ///: Baseline Sampling
                            UPPER
       0   250 SOO
         Meters
                    LOWER
0   500  loon
   Mntera
                            OUTER
                         *.
                     O    250(1   MWO
                          Meters
     Sediment Toxicity
         (% survival)
               < 60
               60-80
               > 80
Figure 11. Amphipod survival (in %) in sediment toxicity tests. Survival greater than 80% indicates a non-toxic sediment.
                                       17

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 NBH Long-Term Monitoring Program
respectively.  Overall survival for amphipods exposed to
outer harbor sediments was 91 %.  It should be noted again
that amphipod survival is a function of the cumulative
effect of all the contaminants in the sediment mixture, and
cannot be linked to a specific contaminant.

Sediment Grain Size Distribution
Sediment grain size was measured because it is one factor
that can affect the benthic community, both with respect to
chemical availability and physical habitat.  For example,
the benthic community in an area composed entirely of
silt/clay would be different from one composed of coarse
sand.   Therefore,  grain size information  assists  in  the
interpretation of benthic community data.

Geologically, NBH forms part of the drowned valley of the
Acushnet  River.    The  sediments  are  primarily  the
weathering products of local metamorphic rocks which
overlay bedrock and glacial till (Summerhayes et al., 1985).
The sediments were categorized as gravel (>2 mm), sand
(>63 |am and < 2 mm)  and silt/clay (<63 urn). Previous
investigations indicate  that sediments with high silt/clay
and low sand content cover the floor of NBH, Clark's Cove
and Apponaganset Bay. The outer harbor area in Buzzards
Bay consists primarily of sands and  gravels with  the
remains   of  the  gastropod,  Crepidula  fornicata
(Summerhayes et al., 1985) covering topographic ridges
and shoals ( Ellis et al., 1977).

Methods
Laboratory analyses were conducted in a two-phase process
(U.S.EPA,  1995).  First, the silt/clay fraction was separated
from the rest of the sediment using wet-sieving and  pipette
analytical techniques.  Shell fragments and organic debris
larger  than 1  mm were removed prior to this analysis.
Next, sediments were classified by their size distribution to
determine  the relative proportions  of gravel, sand  and
silt/clay.

Results  and Discussion
The upper harbor  is composed primarily of fine-grained
sediments  with high silt/clay content.   These sediments
consist of 40-80% silt/clay, which is  expected because the
upper  harbor  is a relatively shallow depositional area.
Several exceptions occur along the banks of the Acushnet
River where isolated areas have more sandy sediment,  and
near the Coggeshall St. Bridge where fast currents scour the
bottom resulting in a gravelly sediment.

The sediment distribution of  the lower harbor is more
complex. Silt/clay sediments are associated with  shallow
areas (less than 3 m in water depth) along the northeast and
southwest shorelines and contain relatively high silt/clay
contents  (40  to  greater than  80%).  Sands  (ranging in
composition  from  60 to greater than  80%)  become
predominant in the vicinity of the Coggeshall St. Bridge,
along the New Bedford Reach of the navigation channel
below the  Coggeshall St. Bridge, and in water depths
greater than 10 m between Popes Island and the Hurricane
Barrier.

The outer  harbor in  Buzzards Bay  deeper than  10 m
consists of sediments with high silt/clay content. The Fort
Phoenix  Reach  area  of  the navigation channel  and
Fairhaven Shoals are generally sandy.  Gravelly sediments
are found primarily in the vicinity of the Clark's Point
outfall.

Benthic Community Condition
Another important component of the NBH-LTM Program
is  the evaluation  of  benthic  invertebrate  community
condition. Benthic invertebrate assemblages are composed
of diverse organisms with a variety of reproductive modes,
feeding types, life-history characteristics, and physiological
tolerances to  environmental conditions (Warwick, 1980;
Bilyard, 1987).  These organisms have limited  mobility and
live in direct contact with the sediment and pore water.

Therefore,  unlike short-term  acute laboratory bioassays,
benthic community condition is an integrator of multiple
chronic stresses in the field, some of which (e.g., hypoxia)
are not coupled directly to sediment chemical analyses.
Previous  studies have demonstrated that benthic community
condition is a reasonable and effective  indicator  of the
extent and magnitude  of pollution impacts  in estuarine
environments (Bilyard, 1987; Holland et al., 1988,  1989).
In addition, benthic infaunal invertebrates are a critical
link in the aquatic food chain.  They serve as food for a
wide variety of fish species and larger benthic epifaunal
invertebrates,  such as lobster  and  crab.   This  report
discusses three  benthic  community  endpoints: species
richness, EMAP index of benthic community condition,
and community structure.

Species  richness is the total  number of  species at each
station. It can be used to assess benthic conditions in areas
where environmental conditions are  similar. NBH is a
relatively small  estuary with only  slight  salinity and
temperature gradients from the upper to outer harbor. For
this reason,  species richness can be used  to  evaluate
differences between each section of NBH.
                                                      18

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A second endpoint, the EMAP benthic index, integrates
several individual measures of the benthic community into
a single value which discriminates between good and poor
benthic conditions (Strobel et ai, 1995). Index values less
 than zero indicate that the benthic community is poor or
degraded, while values greater than zero indicate a good or
healthy community structure.

A third  endpoint,  community  structure,  uses species
composition and species dominance to provide insight into
environmental  conditions.    For  example,  in  mature,
unimpacted systems competitive interactions result in
high species diversity and an even distribution of the most
abundant species (Odum, 1969). Community structure is
determined by interactions among all organisms and, in a
healthy  community,  those interactions  are  generally
density-dependent. Stressed ecosystems display relatively
low species diversity and few dominant species. In spite of
the chemical or physical conditions, those species that are
stress-tolerant and can thrive and reproduce quickly will
become dominant (Odum, 1969).

The benthic community is also  affected  by salinity and
grain size. NBH has a limited salinity  range (28 to 30 ppt).
Also, the average percent silt/clay (<  63 um) for the three
segments was not statistically different; 47% in  the upper
harbor,  39%  in the lower harbor, and 42% in the outer
harbor. Because salinity and grain size do not vary much,
benthic community comparisons are considered  valid.

Methods
In the laboratory, macrobenthos were sorted, identified to
lowest practical taxonomic level (generally species), and
counted. Biomass, measured as shell-free dry weight after
drying at 60°C, was calculated for key taxa; all other taxa
were   grouped by  taxonomic  type   (e.g.,  polychaetes,
amphipods, decapods).  A  complete description of the
methods can be found in the EMAP  Laboratory Methods
Manual  (U.S.  EPA,  1995).   All analyses and sample
collections were performed in accordance with a strict
Quality Assurance/ Quality Control program (Valente and
Strobel,  1993).

Results and Discussion
Species Richness
The number of species  per station  (i.e.,  from all grabs
collected per station) ranged from 10 in the upper harbor to
 116 in the outer harbor.  Species richness is presented in
Figure 12. Although the groupings  are arbitrary and not
intended to  portray ecological  significance,  the  figure
illustrates a clear gradient in  species richness in  NBH:
                                   ///: Baseline Sampling

lowest in  the  upper harbor (20 ± 7 species per  station
[average ± standard deviation]), intermediate (31 ± 14) in
the lower harbor and highest in the outer harbor (72 ± 21).
Using Student's t-testfor unequal variances, the values for
these areas are statistically different (p < 0.001).

EMAP Benthic Index
One  endpoint used  to  quantitatively  assess  benthic
community health is the EMAP benthic  index. A positive
benthic index value indicates a healthy community while a
negative value indicates a disturbed community, either by
natural (e.g., scouring) or anthropogenic stresses.  Figure
13 shows the upper harbor to be highly  impacted, with an
average benthic index value of-5.7 (range of-25.7 to -0.2).
The  lower harbor is also classified as  degraded with an
average benthic index value of -1.4 (range of -4.3 to -0.3).
Only two stations in the outer  harbor are  classified as
impacted, with an average benthic index  value of 1.9 (range
of -0.2 to 4.8). For comparative purposes, an evaluation of
the EMAP data set for the Virginian  Province (i.e.,  all
estuaries, bays and tidal rivers from Cape Cod south to the
mouth  of Chesapeake Bay) shows the lowest one percentile
to have an index value of -2.7. This means that only 1 % of
the entire Virginian Province area had a benthic index
value below -2.7, indicating that the upper harbor, and to a
lesser extent the lower, are extremely impacted.

There  is  generally good agreement  between  species
richness and benthic index values.  One exception occurred
at a lower harbor station which had a relatively high  species
richness value (53 species) and a low benthic index value
(-3.6).  The low benthic index value was due to the high
abundance of spionid polychaetes, which are  generally
indicative of an impacted community. Their presense has
the effect of lowering the overall benthic index value. The
dominant species at  this station  was  the opportunistic
spionid, Streblospio benedicti,   which   was  also  the
dominant species in the upper harbor  (Figure 14). This
species is frequently associated with eutrophic conditions
(Weisberg,  et al., 1994); however, the sediment  at  this
station (8% silt/clay, TOC content 1.6%) did not exhibit the
characteristics usually present in eutrophic areas (i.e., high
silt/clay and TOC).
Benthic Community Structure
Descriptions of the benthic community include species-
level parameters (abundance and biomass), and population-
level  parameters (species composition and dominance).
Total benthic abundance was highly variable in individual
grabs for NBH.  Total abundance (count of each animal of
every species, summed for all grabs) by station ranged from
                                                      19

-------
NBHLong-Term Monitoring Program
                               UPPER
       0   250  50O
          Meters
                      LOWER
O   500   1OOO
    MelfH
                              OUTER
      Species Richness
         (# of species)
                                                               0-25

                                                               26-50

                                                               51 -75

                                                               > 75
 Figure 12. Species richness in the benthic community of NBH. Generally, areas with a high species richness, (i.e. that are
 more diverse) are healthier.
                                          20

-------
                                                               ///; Baseline Sampling
                          UPPER
      0  250 500
        Meters
           LOWER
                                        O   5OO   1000
                          OUTER
            +JMJM
                    0    2500    SOOO
                        Meters
Benthic Index
       <-2.7
       -2.7-0.0
       > 0.0
Figure 13. EMAP benthic index applied to NBH. A positive benthic index indicates a non-degraded benthic community; a
negative benthic index indicates a degraded benthic community.
                                    21

-------
 NBH Long-Term Monitoring Program
 a low of 154 animals to a high of 18,380 animals. Total
 abundances by station averaged for the upper, lower and
 outer harbors were similar with 3612, 2435, and 2295
 animals,  respectively.  Abundance by  itself is not  an
 indicator of benthic community health;  however, it can  be
 used in conjunction with species composition to provide
 insights into community stability.

Dominant benthic  species  were classified in  the upper,
lower and outer harbor by  identifying those species that
collectively account for 75% of the total abundance of each
benthic community.  The  presence of many dominant
species of relatively uniform abundances suggests the
community is near its carrying capacity, is stable, and is
relatively unimpacted. In contrast, impacted areas typically
have few dominant species which are opportunistic (small,
fast-growing organisms) and tolerant of the contaminants
present. In the upper harbor, only 3 species were dominant
while in the outer harbor, 16 species were dominant (Figure
 14).  The upper harbor was dominated by the opportunists,
                                                Streblospio benedicti,  a spionid polychaete, and Mulinia
                                                lateralis and  Gemma gemma, both  veneroid mollusks.
                                                Only moderate  numbers  of opportunistic species were
                                                identified in the lower harbor, which appeared to be a mix
                                                between the upper and outer harbors. S. benedicti, the most
                                                abundant species in the upper harbor, averaged 565 animals
                                                for  upper   harbor  stations,  whereas,  ostracods,  most
                                                numerous in the outer  harbor, averaged 71 animals  for
                                                outer harbor stations.

                                                The  upper  harbor displays  symptoms  of a  stressed
                                                ecosystem  based on the  opportunistic  qualities  of  the
                                                species, the low  species diversity, and the low  number of
                                                dominant species.  The  lower harbor has slightly greater
                                                diversity than the upper harbor and more dominant species,
                                                indicating it is less impacted than the upper harbor.  In
                                                contrast,  the  outer harbor has  a dramatically  higher
                                                diversity and more evenly distributed species abundances,
                                                indicating a healthier ecosystem.
Upper
Lower
                                                                                                   Streblospio
                                                                                                   benadicti
 Outer
                                                 Mulinia lateralis
                           Gemma gemma
                                                                   Mulinia lateralis
                   Streblospio benedicti
          Oligochaeta
        Msdiomastus ambiseta
     Mercenaria marcenaria
          Ostracoda
         Oligochaeta
         Medtomastus ambiseta
         Haminoea solitaria
      Nucula proxima
    Tellinidae
    Ancidea catharinae
    Crepidula fomicata
  Macoma tenta
  Jbaryx acutus
  Scolelepis texana
  Nephtys incisa
  Odostomia seminuda
 Mulinia lateralis
Cirratuiidae
Parapionosyllis longicirrata
                                                                      400
                                                                                      500
                                                                                                      600
                                         Abundance (avg. grab/station)

 Figure 14.  Dominant benthic invertebrate species in NBH. Abundances are averaged by grab for each station, then averaged
 for each harbor segment.
                                                      22

-------
                                                                                          ///: Baseline Sampling
In summary, all three measures  of benthic invertebrate
community condition indicate that the benthic community
of the highly contaminated upper harbor is degraded.  This
benthic community had low species richness, a negative
EMAP benthic index and was dominated by opportunistic
species.  The benthic community  in  the lower harbor,
although less degraded than that of the upper harbor, was
also  significantly impacted.    Opportunistic  species
dominated in the lower harbor, however, in lower numbers
than the upper harbor,  and species richness was higher.
Lastly, with a few exceptions, the outer harbor benthic
community can generally be classified as healthy, based on
the high species richness, positive EMAP benthic index
value, and even distribution of the dominant  species.

Bioaccumulation
Blue mussels (Mytilus edulis)
Quantifying  changes in  the  sediment  (i.e.,  chemical
concentrations, toxicity, and benthic community) fulfills
one aspect  of assessing  the effectiveness of  remedial
activities in NBH. However, contaminants present in the
water column can be transported to other areas and also can
be incorporated into the food chain.  Therefore, a second
important objective  is  to document  that reduced  PCB
sediment concentrations result in reduced water column
concentrations.  While quantifying PCB water column
concentrations  throughout NBH is  possible,  it would
require large water volumes and many expensive analyses.
Also, one-time sampling events are not always sufficient to
encompass  all the  variability  inherent  in a dynamic
estuarine system like NBH; water PCB concentrations are
affected by  tides and weather events (e.g., wind, storms).
An alternative approach is to use organisms to provide this
information.

Filter-feeding bivalves (e.g., mussels, oysters) "sample" the
water column almost constantly, thus integrating the effects
of tides and weather. Because of this, blue mussels have
been used extensively  to quantify chemical  pollution
(Arimoto, 1981; Farrington, 1983; Rice and White, 1987;
Tanabe et al., 1987; VanderOost et al., 1988). In addition,
a previous study in NBH demonstrated a good correlation
between PCB water column concentrations and blue mussel
tissue residue concentrations (Bergen et al., 1993). Finally,
research conducted with blue mussels in NBH by AED
scientists  since  1987  shows  a  relatively  constant
bioaccumulation rate of PCBs over that time  period.  This
provides an excellent comparative data set to  assess future
measurements.  Based on  all these  factors, blue mussels
were selected to measure PCB concentrations in the water
column at several  locations in NBH.
Methods
Detailed methods for collecting and deploying blue mussels
are found  in Nelson  and  Gleason (1995).   Briefly,
uncontaminated  mussels  were collected  from  East
Sandwich,  MA,  and placed  in polyethylene mesh bags.
Four independent replicate bags of mussels were deployed
1 meter above the bottom at three  sites:  Coggeshall St.
Bridge (NBH-2), at the boundary between the upper and
lower harbor; Hurricane Barrier (NBH-4), at the boundary
between the lower and the outer harbor (Buzzards Bay);
and West Island (NBH-5), a reference site in Buzzards Bay
(Figure 15). After 28 days, the mussels were retrieved and
frozen.  Prior to analysis, mussels were thawed, shucked
and homogenized.  Two grams of  the homogenate were
extracted with acetonitrile and pentane, solvent-exchanged
to hexane and analyzed by  gas  chromatography for the
same 18  PCB  congeners quantified in  the sediments
(Bergen et al., 1993).

Results and Discussion
Total PCBs in the blue mussel tissue for all three stations
are shown  in Figure 16. The December  1993 and May
1994 deployments are part  of the  NBH-LTM program.
Mussel deployments at this site for the last four years show
no significant difference in  mussel PCB tissue residues.
Some increases in PCB concentration are seen in the spring
and early summer as mussels  increase their gonadal tissue
(and lipid content) prior to spawning.  However, this same
seasonal  variability was observed  at all  three  stations,
including the West Island reference site.
                      9-JUI-93
1-Dec-93    23-May-94
  Figure 16.  Total PCBs (as ug/g dry wt of tissue) in blue
  mussels at three stations in NBH  The  bars represent the
  average concentration of four replicates, the line represents the
  standard deviation.
                                                    23

-------
NBH Long-Term Monitoring Program
            N
                 Coggeshall St
                 Bridge  	
 Sampling Sites


I   Mussel Stations


•   Fish Stations
 Figure 15. Station locations for blue mussel deployments and mummichog collections.
                                                 24

-------
                                                                                          ///: Baseline Sampling
Mussel deployments will continue twice a year (April and
October) at all three stations as part of the NBH-LTM
program. These data will be used to compare reductions in
sediment  PCB concentrations  due  to  remediation to
corresponding changes in seawater and mussel tissue.

Mummichogs (Fundulus heteroclitus)
Tissue PCB concentrations of indigenous  mummichogs
(Fundulus heteroclitus) were examined because they feed
at least partially on material coming from the wetlands and
spend  their  life  cycle   in  a  relatively  small   area.
Mummichogs primarily scavenge on the bottom of marsh
edges and shoreline and reportedly overwinter in the mud.
Gut content examinations  have revealed detritus, small
Crustacea and sand grains in their digestive tract, showing
their close ties with the sediment (Bigelow and Schroeder,
1953).

Methods
In June 1994, four mummichog traps  were deployed at each
of three sites in NBH and one reference site: Station 1, near
the Hot Spot; Station 2, north of Coggeshall St. Bridge;
Station 4, near Popes Island; and Station 5, at West Island
(Figure 17). Mummichogs were collected and whole fish
homogenized for analysis.   Approximately 2 g of tissue
were  extracted with  acetonitrile and  pentane,  solvent-
exchanged to hexane and analyzed by gas chromatography
for the same 18 congeners  quantified in the sediment and
mussels. In addition to this  suite of 18 PCB congeners,
mummichogs  were  analyzed  for  coplanar  congeners
CB077, CB126 and CB169.  This required an additional
split of the extract on a carbon column before analysis on
the gas chromatograph.

Results and Discussion
Mummichog tissue concentrations are shown  in Figure 17.
Variability was high among replicates within a station;
however, there was  a dramatic decreasing gradient (two
orders of magnitude) in total PCB concentration from the
Hot Spot to West Island.  Coplanar PCB congeners lack
ortho substitution on the biphenyl rings.  This allows the
two rings to move into one plane.  While present in low
levels, these congeners are particularly toxic (Safe, 1984)
and may bioaccumulate in some organisms to higher levels
than non-planar congeners (Kannan et al., 1989).  All three
of  the  coplanar  congeners  quantified  decreased  in
concentration  by two orders of magnitude from the Hot
Spot to West  Island. Mummichogs will continue to be
collected at these sites every spring to determine whether
reduced  sediment PCB concentrations  result  in reduced
tissue concentrations of an indigenous fish.
    400 n
          Station 1
Station 2
                               Station 4
Station 5
Figure 17.   Total  PCBs  (as  ug/g  dry  wt  of  tissue)  in
mummichogs collected from NBH. Bars represent an average
of four homogenates, with the exception of Station 4.  Station 4
is a single homogenate.  Vertical lines represent one standard
deviation.
                                                    25

-------
 NBH Long-Term Monitoring Program
         Section IV: Associations Between Biological Indicators and Contaminants
The condition of an estuarine ecosystem is the result of
complex interactions between the physical, chemical and
biological components of the system. Based on the data
from a series of individual measurements, NBH is a
highly stressed estuary.  This section of the report will
examine   relationships   between  these  individual
measurements  in order  to better  assess the overall
ecological condition of  NBH.  For example, studies
referenced in an earlier section suggest that TOC affects
PCB availability,  which in turn may affect the number of
species in the benthic community. However, in NBH, do
TOC-normalized PCB concentrations  relate  better  to
benthic   community   indices  than   total   PCB
concentrations?    If  not,  what   other  factors  are
contributing to the observed effects?   Examination  of
these relationships will provide a better understanding of
the current conditions in NBH.

PCB and Metal Normalization
The interpretation of contaminant data is complicated.
Various sediment components, such as the amount  of
TOC or the presence of AVS, influence the availability
of contaminants to benthic biota.  As stated previously,
PCBs have a high affinity for TOC.  Therefore, PCBs in
high TOC sediments are  less available to cause harm to
or accumulate in organisms than  PCBs in  low TOC
sediments.    Consequently, PCB  concentrations  in
sediments  should  be   normalized to  TOC  before
comparisons are made between PCB concentrations and
biological endpoints. However, in NBH the relationship
between biological  endpoints and PCBs was equivalent
whether or not the PCB concentration was normalized to
TOC.

There are two probable reasons for this observation.
First, any  effect of TOC  on the availability of PCBs is
overshadowed by the magnitude of PCB contamination
in the upper and lower harbors.  Second, PCBs and TOC
covary  (Figure 18).    In  areas  where  total  PCB
concentrations  are  high,   TOC  is  also high, and
conversely, where PCB concentrations  are low, TOC is
low. Because  trends between the biological endpoints
 and PCBs are essentially the same whether or not PCBs
 are normalized, we chose not to use the TOC-normalized
 PCBs in the graphical presentation of the biological
 endpoints.
  1,000 -i
    100-
o>
O)
CD
O
CL
     10-
      1 -
    0.1 -
   0.01

                                     —I—
                                      12
                                              15
                  Total Organic Carbon (%)
Figure 18.  Total PCBs plotted against total organic carbon
in sediment for all stations in NBH.
 The bioavailability of metals in sediment is important to
 understanding the  ecological effects of metals.   An
 organism's response may or may not be related to total
 metal concentrations.  AVS in sediments binds  with
 divalent metals (Cd,  Cu, Pb, Ni, Zn and Hg) in a 1:1
 molar ratio with the bound metal-AVS complex being
 biologically unavailable (DiToro, et al.  1990).  In this
 report, normalizing for AVS was done by subtracting the
 AVS concentration from the sum of divalent metals, both
 as molar concentrations (Figure 19). Therefore, when the
 resulting value is negative (i.e., there is more AVS than
 sum of divalent metals), the sediment should be non-
 toxic.  When metals are in excess, the sediments are
 potentially toxic.  The area with  the most stations
 containing excess metals is the upper harbor.

 Importantly,  the metal  concentrations  used in these
 calculations  were  the  sum  of  divalent   metal
 concentrations taken from the total metal extraction (2M
                                                    26

-------
                                                                                                 IV: Associations
                          Lower
Outer
                                                         100 g
  -120J
Figure 19. AVS normalization (divalent metals - AVS) in umol/g
dry weight for each harbor area.  A dot represents a single
station. The alacement on the horizontal axis is relative to the
station's placement in the harbor, but for this purpose it serves
only to separate the data
nitric acid). Simultaneously extracted metals (SEM) are
usually compared with AVS; SEM is the sum of divalent
metals from the AVS extraction (1M hydrochloric acid).
The  concentration of metals from this study should be
equal to or greater than SEM because a stronger acid
extraction was used than is typical for SEM.  Because of
this, it is likely that even fewer stations shown in Figure
19 would have available divalent metals.

Normalizing  metals with AVS is  most often done in
conjunction  with  acute  toxicity data (e.g.,  amphipod
survival).  Because the data suggest divalent metals may
not be biologically available at most stations, only the
non-divalent  metals (As, Se, Cr) were included in the
graphical  presentation  of  the acute  toxicity  data.
However, comparison of the chronic biological endpoint,
species richness,  was  completed using total  metals
because this is more reflective of what would occur under
field conditions.

Trends Between Biological Endpoints and
Contaminants
Comparisons were made between  field and  laboratory
biological   effects   endpoints  and  contaminant
concentrations  These comparisons used total metals and
total PCBs   to  show   the   similarity  in response to
increasing contaminants, regardless of the class  (i.e.,
organic, metal) of contaminant.  In general, stations in
NBH with high PCB concentrations also had high metals
concentrations (Figure 20). Because these contaminants
are collocated, it is not possible to attribute causality to a
single contaminant. The relationships between species
                                                       •o
                                                       05
                                                          10 =
                                                          0.1
                   10      100     1000    10000    100000   1000000
                               Total PCBs (ng/g dry)

              Figure 20. Co-location of total PCBs (measured as sum of 18
              congeners in ng/g dry wt) and total metals (measured as sum
              of all metals analyzed in umol/g dry weight).
                 richness and PCBs and metals demonstrate this point.
                 The number of benthic species in NBH decreased as the
                 total  PCB  concentration   increased  (Figure  21 a).
                 Likewise, the number of benthic species decreased as the
                 total metal concentrations increased (Figure 21 b). From
                 these data, it is not possible to determine whether the
                 change in species richness  is due to PCBs,  metals, or
                 both.  More likely, the observed decrease is due to the
                 cumulative effect of both types of contaminants because
                 most sites with high PCB concentrations also had  high
                 metals concentrations (Figure 20).

                 In contrast to species richness, the amphipod sediment
                 toxicity test is a laboratory  measure of acute, or short-
                 term, biological effects.  Amphipod survival in  NBH
                 sediments decreased when the total PCB concentration
                 reached an apparent threshold (Figure 22a). A threshold
                 also was  observed  as  metal  concentrations increased
                 (Figure 22b).   Because PCBs  and metals covary, as
                 shown  in Figure 20, it  is not possible to demonstrate a
                 clear relationship between individual contaminants and
                 survival.  However, sediments from the outer harbor were
                 generally much less toxic than those  from the upper or
                 lower harbors.

                 Sediment Toxicity and Benthic Community
                 Condition
                 The amphipod sediment  toxicity  test  and  benthic
                 community indices both measure biological responses to
                 multiple stressors.  As stated previously, the sediment
                 toxicity  test  is  a  short-term  assay  that  responds
                 predominantly to contaminants present at acutely  toxic
                                                      27

-------
 NBH tsHn-
T»-


* go-
!
 total PCB RmCintMrtttftt CAd t) Hotel meials, ij
sum of all rrwtiJi) « (hi upj>»f. lowwf uniJ   ie\t, jiii|«lnpi «i «univai late* below
     indJcaic HUN;
assay and miwr
                     ih« shc^i-wrm ampittpod survival
                       KMAI" K-ulliic indci. is shown
in fipure  23.    This  graph is divided  into  four
izompjrtment^ iL H. Ill «tmt IVi Ktrfd on effect levels
(SO1* of conictd amphipm) iurvival for sediment tonictiy
and 0  for  hentNt  twfcM   Stetmns  that have  ho«n
nontDiK «edimtna jtftd A heaMiy benthtc commumn »e
in L  Ai  might he c^pecttd, motn of ithrsf ^uticxv, are
located in  the dttUt  hflltMH  SIMKHU in Q hsv« jn
impacted  hmthic communify. hmrvcr, die ^dimen& «v
not jKulrly toxic, Thes*' «ut»m are found in both the
kwcr and upper taft«ir>  Became the hcndiic coodilioci
i« degraded and the *cdimeni  is not acutely toxic. «
appears (hit the cumulalivc impact* of thes* sediments
art dironic.   Chronic  itressori can include  non-
120-
-
i-«-
1
E
o •
u
*^
; ®-
4
2
C


-


i^j
0°o % ^g^I  t 4
V^V 4 i
%
**** V
••
•A
.*• •*
0 A
•
B
* . f
001 01 1 10
I (MS*. CM |jinol^ary*t
• Upper
A Unwr
o outer









TOO

Fipura 22,
                  »wiwil jsblted aguihM ai tot»l PC&s and t>) notv^iycutif m*c*l« |»um of A*. Sn Cf cwnthned as molar

                                                    2S

-------
                                                                                          IV
i
  -10
  90
   •I
       A  l*«"
        >  0*.     Ill
               IAPI
     vafew*
            wiiki 411.1 lny  pwumeim such  u  low
         tuny gem concentration  Dlwol ved o*> fen was
not measured M each station during the NBH-LTM
program. DM  umc w-dimeni^. These
           dtanbalcd pnrrnonK Jinong [he upper and
|o*«r haibarv huwcvcr. mt*\ o( Ihe ddimn tfe in the
upper hwbor. A1 alJ eiorpt  <*« iiUUcim:, jruiely tone
M'lhmenb also Iwd a degnnted benihic  community.
Thcie rrnuanmia two station'* aw in IV, where the hcnthic
community n w>t  Degraded and the Mttliment i% aculely
KUIC-
     average total PCS*,  ^luL-iL-tl  jneuils.
 sur\ivut(  and  beitthic tndte* f«»  L n  and  III  are
 *umrrarc£HJ tn TaMc V Cknerally. Mdfion> m I twvt low
                PCB> jnJ nurtat* and oV>< MJIH«^ JA-
             I impacted PCB and m«*l eoncentral.»om
 in  II  a»  viriflble.  with  many statkmi  having
              hl|}ifir than itoiw in f CompnrinuMii 111
       s (he greater nuigc Jind
 buth metal* «nJ PCBv Only one ttflUioo in HI contained
 CM cDHxntntttou withiti the range of cmctfltfatHHu
 Imrad m L OwaalL the* x^. whether tpeoes number <*
a went v ample* benihiv1 iiwk*, we perhaps the
   r.ilh* of the condition nf the  MjJiments .11 n
steliiifl. jjJ&IOftigh »«ch analj've* ciin lie t'tislJy,  Srd-imenl
fnucity testing n \E*\ costly; however, it tkift EWK |ti w i»
        a piciuw of the benthit  «.'nndiiicm  Bgure Z3
      how srdiiww tomcrtii aid the benthk indct can
        ingclhcf  II *ciiiment«« are MCUKlv nun. ilu-ri
      is a high  prohnNIJty thni ihey may also have u
         henthlc oommunttv .  t f resiiurw* are limned.
benihk communiiy analyses could be
      sampk* ihn art not jtuie Iv toxic
 Future Sdmplinu Rvcomnu'iidalions
      monitotlnj; tn NBH iihuuld incluJe each
     in the bOMflinc mcmitcmng plu» several
           TTlK  measurement nl ittese new indK4«orv
              tin? jNliiy to define contMnraint effccts-
 I n M, the rnduMun «l SEM n«4*uieTnenis lo rwrmnJlw
 metttlii  datu  will   impfOVt;  (he  estimauan  nf  the
 httfavjilable portion of the iwi.il-. Sn metals; are UMW! ui
 the  SEM/AVS mirmatHatiiQn  • cupper,  rackeL j»nc.
          lead md mctcun    Thnc metal* couki be
         from the wrdimem AVS mtract.  IB iddltion.
 mi -i-inial  W4ici   meia.1*  ajncentraiians  eouJd  he
 Second db»olv«d. my gen ihould be mamtDrrd »« the
          luifif)  U  docaoent  pmenUi! crunpc*  tn
         auoM related event*. »uch a* algat blwim and
     dissolved tmy»cn. Currently, ihere is high nutnent
 input into NBH which can OMIM euirnphie cnndih- .n
 tVe*umably. the« condition* «re not occurrknj «o*
 hecatne elevated canuinOTani conccnmticnt MC Howe la

-------
 NBH Long-Term Monitoring Program

toxic  to algae are reduced by remediation,  eutrophic
conditions may increase.  Changes due to eutrophication
can  be monitored  by  measuring  dissolved  oxygen
concentrations in the water column.  Dissolved oxygen
demand increases dramatically as  plant  and animal
materials decompose.  This could lead to hypoxia.  The
most effective way to monitor fluctuations  in dissolved
oxygen (accounting for temporal changes) is to  take
measurements over several days.  Instruments designed
to monitor water quality continuously could  be deployed
in NBH to document changes in dissolved oxygen. This
would help identify eutrophication-related events.
                                                     30

-------
                                  Section V: Data Documentation
Data Format and Availability
An electronic copy of  the  NBH-LTM data and their
associated metadata are available on PC-formatted 3.5"
disks. The data are organized on spreadsheets in Microsoft
EXCEL® 4.0 and 5.0 formats. It is the responsibility of the
user to read and fully understand the limitations of these
data by reading the metadata.  In addition, data are stored
in hardcopy and electronically at the U.S. EPA, NHEERL,
AED. Currently, they are in multiple SAS® data sets that
can  be combined using unique  identifiers  such  as  the
station plus  sampling  date, or  sample  identification
numbers.  The data are expected to be converted from
SAS® to ORACLE® in the near future at which time  all data
would be stored in an ORACLE® database using relational
tables.  Data  sets  exist with  detailed station information
(including latitude, longitude, weather conditions and water
depth),   sampling  information,   analytical  chemistry,
sediment grain size,
benthic community measures and sediment toxicity tests,
quality assurance information, and a dictionary for all data
sets available. The name and contents of each data set can
be retrieved from  the  data dictionary.  Chemistry  and
benthic  community data  sets include  all replicates  and
associated QA codes.  Sediment toxicity tests are presented
as the average of five replicates, giving a single observation
per station.
Electronic World Wide Web (WWW) Access
It is the intent of this program to make these data easily
accessible. Eventually all of the NBH data and associated
case studies  will reside on the U.S. EPA's WWW service.
This service  allows users from both the general public and
EPA to access this database, browse the data, access CIS
maps related  to the  project,  and download  data and
associated metadata files from within their Web Browser.
                                                    31

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NBH Long-Term Monitoring Program
                                             Bibliography
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The Standard Times. June 7, 1939, Vol. 178, No. 94.
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                                                                                                     Glossary
                                                Glossary
acid volatile sulfide (AVS) - solid phase sulfide  in the
  sediment extracted using cold acid.  The ratio of SEM
  (simultaneously extracted  metal) to AVS is used to
  indicate how available the metals are to the biota.

acute effects - dramatic change  in condition of biota,
  usually mortality, that occurs relatively quickly (hours to
  days) after exposure.

amphipod - small crustacean, generally scavengers, with an
  arched 7-segment thorax. Adults range in length from
  approximately 2 to 40  mm.  Some species  are tube-
  dwellers; others are free swimming or burrowers.

anthropogenic - originating  from man,  does not occur
  naturally.

ARAR  -    applicable  or   relevant and  appropriate
  requirements.   ARARs are standards or criteria for
  cleanup found in federal  or  state  environmental law
  which are considered pertinent to the Superfund site. Can
  include water quality criteria or other relevant criteria.

Aroclor® - a trademark used by the Monsanto company to
  refer to mixtures of PCB congeners.

atomic absorption spectrophotometer (AA) -  instrument
  used to measure  metal concentrations.   Samples are
  vaporized and injected into a flame. The light emission
  of the ignited sample is measured as  absorbance at a
  metal-specific wavelength.  Absorbance is related to the
  sample concentration.

benthic invertebrate community - assemblage of animals
  without backbones (e.g., worms, shellfish, Crustacea) at
  the sedimentnwater interface (epifauna) and in the bottom
  sediments (infauna).

bioaccumulation - the uptake and storage of chemicals from
  the environment by biota.  Uptake can occur through
  feeding or diiject absorption.
bioavailable - the fraction of a compound  which is not
  bound to another material (e.g., AVS, TOC) and which
  can affect organisms.

biomass  -  total  quantity of organism tissue, generally
  calculated by drying and weighing a sample.

biomonitoring -  analyzing environmental conditions by
  examing changes  in  biota  (e.g.,  chemical  uptake,
  survival, etc.).

biota - all organisms, plant and animal, in an ecosystem
  (collective populations of plants and animals).

CERCLA  -  Comprehensive Environmental Response,
  Compensation & Liability Act. Federal law (passed  in
  1980, modified in 1986) that created a special trust fund
  (Superfund)  to  help  finance   the  investigation   of
  hazardous waste sites.

chromatographic - analysis  using  chromatography.   In
  chromatography, compounds are separated based upon
  their preference to bind to a stationary or mobile material.

chronic effects - change in condition of biota that occurs
  over  relatively  long  exposures (months to  years).
  Measures of chronic exposure can include community
  structure and pathology.

community structure - the assemblage  of populations  of
  organisms that interact with each other.  The structure is
  shaped by populations and their  geographic range, the
  types of areas they inhabit, species  diversity, species
  interactions, and the flow of energy and nutrients through
  the community.

competitive interactions - (competitive exclusion principle)
  the defining characteristics of a population that are a
  function of competing with other nearby  organisms  or
  populations for limited resources.

congeners - chemical compounds with similar molecular
                                                     35

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 NBH Long-Term Monitoring Program

  structures; however, with different molecular weights.

coplanar - lying in the same plane. For PCBs, congeners
  are coplanar when both biphenyl rings can move into one
  plane.

covary - things that change in a similar way relative to each
  other

density-dependent  interactions  -   The   defining
  characteristics of a population that are a function of the
  number and proximity of its individuals (i.e., in a heavily
  populated area some organisms do not reproduce). The
  number and type of relationships  between  organisms
  increase as the number of organisms increases in a given
  area.

divalent - an ion having a double positive charge

ecological  risk assessment - a process that defines the
  magnitude and extent of anthropogenic effects on the
  ecosystem and estimates the acceptability of those effects.

Environmental Monitoring   and  Assessment  Program
  (EMAP) - a cross-resource monitoring program designed
  to statistically evaluate and compare stations across the
  United States.  The Estuaries-Virginian Province  team
  was  responsible for monitoring  estuaries  from the
  Virginia coast north to Cape Cod, MA.

EMAP index of benthic community condition - a  scale
  indicating degraded or non-degraded  bottom sediment
  communities developed by EMAP. The benthic index is
  a function of spionid and tubificid abundance, salinity,
  and Gleason's diversity index.
   Benthic Index = 0.0489G - 0.0545r „
0.00826Sp/omds - 2.338
          G =
                        Gleason
                               -0.001035^
                                        - x 100
                     SM=bottom salinity
            G = % of Expected Gleason's Diversity Index
euryhaline - organisms able to tolerate a wide variation in
  salinity.

eutrophic - highly productive ecosystem that generally
  results from over enrichment of nutrients.

extracted - chemically treated with a solvent to remove a
  soluble material.
gas chromatograph (GC)- instrument used to separate and
  identify organic compounds. The volatilized sample is
  injected into a carrier gas.  The carrier gas and sample
  pass over a stationary material. Compounds pass through
  the  stationary material at different rates, and based on
  these rates can be separated and identified. The GC can
  be  used for accurate measurements  of very  small
  quantities of complex mixtures.

gonadal - relating to the reproductive organs.

grain size - sediment characterization that is a measurement
  of the average particle diameter.  Silt/clay, sand and
  gravel are the three major classifications used in this
  report.

gravel -  sediment particles greater than or equal to 2 mm
  diameter and less than 64 mm diameter.

hypoxia - low dissolved oxygen concentration.

ICP - inductively  coupled  plasma spectrophotometer -
  analytical instrument used to quantify several metals at
  the  same time.

interstitial - spaces between the sand grains

lower harbor - area between the Coggeshall St. Bridge and
  the  hurricane barrier.

macrobenthos - animals living in the sediment greater than
  0.5  mm in length.

metadata - information on quality  assurance,  quality
  control, data handling and methods that are associated
  with research data.

normalize - a technique applied to help evaluate two or
  more  entities on  similar scales,  mathematically  or
  chemically.

organic compound - generally all carbon compounds (i.e.,
  containing the element carbon) with a few  exceptions,
  such as CaCO3.

ortho substitution - refers  to positioning of  substituent
  atoms on adjoining carbon atoms on a biphenyl group
  (C6H5+).

outer harbor - the area  from the hurricane barrier to the
outer closure line.
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ppm - parts per million. Equivalent to ug/g.

polychlorinated biphenyls (PCBs) - two  6-carbon  rings
  (biphenyl  -  C6H5+) with two or  more chlorine atoms
  substituted for hydrogen.

pore water - water in the interstitial space between sediment
  particles.

probabilistic   -  designed  to  be   used  in  statistical
  manipulations.

ROD - record of decision.

sand - sediment particles greater than or equal to 63 um and
  less than 2 mm diameter.

SARA - Superfund Amendments & Reauthorization Act.

sediment toxicity tests - exposure of animals to site-specific
  sediment for a limited time to determine acute responses
  (mortality) of the animals to the sediment.

silt/clay - sediment particles less than 63 um in diameter.

solubility  -  the ability of one substance to dissolve in
  another, measured as the amount of solute that will
  dissolve in a set amount of solvent.
                                             Glossary

solvent-exchanged - changing the solvent of a solution to
  one suitable for gas chromatography analysis.

sonicating - disrupting using high frequency sound waves.

spawning - process of fertilization of eggs

species dominance - species or group of species that exert
  controlling influences over the population by virtue of
  their population, size, feeding strategy,  or mode of
  reproduction.

species  richness  - the total number  of species in a
  community.

total organic carbon (TOC) - sum of material in a sample
  containing carbon  compounds.  Classically, organic
  carbon is a result of detritus and decaying organisms.

unbiased - without influence

upper harbor - area north of the Coggeshall St. Bridge in
  New Bedford Harbor.

Young-modified  van  Veen  grab  sampler  -  a hinged
  sampling device, resembling a clam shell, for collecting
  sediment. The device is  contained in a frame which
  helps to keep  it flat on the bottom  during sample
  collection. The sediment surface area sampled is 440 cm2.
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