EPA/600/B-15/298
Quantitative Microbial Risk Assessment Tutorial
Land-applied Microbial Loadings within a 12-Digit HUC
Gene Whelan
Kurt Wolfe
Rajbir Parmar
Michael Galvin
Marirosa Molina
Richard Zepp
U.S. Environmental Protection Agency
Office of Research and Development
National Exposure Research Laboratory
Athens, GA
Keewook Kim
University of Idaho
Idaho National Laboratory
Center for Advanced Energy Studies
Idaho Falls,  Idaho
Paul Duda
Mark Gray
AQUA TERRA Consultants, a Division of RESPEC, INC.
Decatur, GA 30030
11/20/15

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                                        Summary
This tutorial reviews screens, icons, and basic functions of the SDMProjectBuilder (SDMPB). It
demonstrates how one chooses a 12-digit HUC for analysis, performs an assessment of land-applied
microbes by simulating microbial fate and transport using HSPF, and analyzes and visualizes the results
at multiple locations in the watershed using BASINS. It shows how to

   •   Initiate the execution of SDMPB.
   •   Navigate the SDMPB.
   •   Identify and label a 12-digit HUC.
   •   Develop the necessary input files to execute HSPF successfully.
   •   Develop the necessary input file to view results from the SDMPB and HSPF.
   •   Register the HSPF simulation with BASINS.
   •   Use HSPF to simulate SDMPB's problem statement.
   •   View simulation results for flows and microbial densities with BASINS.

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               Land-applied Microbial Loadings within a 12-Digit HUC


PURPOSE

Automate the data acquisition process for input data requirements of a confederation of models


OBJECTIVE

Preform an assessment of microbial fate and transport within a 12-digit HUC by capturing contextual
data for the watershed model WinHSPF (a.k.a. HSPF) and pre-populate its input data files to account for
    •   Overland runoff;
    •   Snow accumulation/melt;
    •   Hourly simulations;
    •   NLDAS meteorological data;
    •   Land-applied microbial loadings; and
    •   Microbial fate and transport.


DEMONSTRATION

This tutorial reviews screens, icons, and basic functions of how one takes the output from the
SDMProjectBuilder (SDMPB) and performs a microbial fate and transport analysis within a 12-digit
Hydrologic Unit Code (HUC-12). A HUC-12 is a subwatershed  between 16 and 63 mi2. Application of the
watershed model HSPF is demonstrated, as  well as visualization of results at multiple locations in the
watershed using BASINS. The application demonstrates how to
    •   Initiate the execution of SDMPB.
    •   Navigate the SDMPB.
    •   Identify and label a  12-digit HUC.
    •   Develop the necessary input files to execute HSPF successfully.
    •   Develop the necessary input file to view results from  the SDMPB and HSPF.
    •   Register the HSPF simulation with BASINS.
    •   Use HSPF to simulate SDMPB's problem statement.
    •   View simulation results for flows and microbial densities with BASINS.


SOFTWARE ACCESS, RETRIEVAL, AND DOWNLOAD

Instructions for access, retrieval, and download of the SDMProjectBuilder, HSPF, and BASINS software
products are provided by Whelan et al. (2015a). When installed, three shortcut icons should be on your
desktop:

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TUTORIAL - TABLE OF CONTENTS

NAVIGATING THE SDMPB AND IDENTIFYING THE HUC-8 OF INTEREST

CHOOSE A 12-DIGIT HUC WITHIN A WATERSHED AND COLLECT ENVIRONMENTAL AND SOURCE-TERM
DATA
    •   Choose a HUC-12
    •   Identify and Modify Local Source-term Data
          o  MonthlyFirstOrderDieOffRateConstants.csv
          o  WildlifeDensities.csv
          o  PointSourceLL.csv and PointSourceData.csv
    •   Import Local Data Files
    •   Run Project Builder and Collect Map Layers Describing Environmental Characteristics

USE HSPF TO SIMULATE THE SDMPB PROBLEM STATEMENT BY PERFORMING AN ASSESSMENT ON A 12-
DIGIT HUC
    •   Execute the Assessment with HSPF
    •   Register the HSPF Simulation with BASINS

LABEL SUBWATERSHEDS, RIVER REACHES, MET STATIONS
    •   Increase the NLDAS Symbol Size
    •   Label and Color-code MET Stations
    •   Correlate MET Stations with Subwatersheds
    •   Label Stream Reaches

VIEW SIMULATION RESULTS FOR FLOWS AND MICROBIAL DENSITIES USING BASINS
    •   Register HSPF Simulation and Data Files
    •   View Graphical Simulation Results for Hourly Discharges at Multiple Locations
    •   Modify the Look and Feel of the Graphical Plots
    •   View Simulation Results for Hourly and Daily Discharges at the Same Location
    •   View Microbial Simulations: Time Series of Microbial Densities at Multiple Locations
    •   View Tabular Results Associated with Hourly Discharge and  Microbial Density Simulations

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NAVIGATING THE SDMPB AND IDENTIFYING THE HUC-8 OF INTEREST
1.   Execute the SDMProjectBuilder (SDMPB) by clicking on the shortcut icon displayed on the computer
    screen:


2.   A detailed and more comprehensive tutorial describing the procedure for identifying an 8-digit HUC
    is provided in Whelan et al. (2015b). An abbreviated version follows.

3.   Create a folder where you have administrative rights. In the example below, "TESTA" was created.
    Click "Save".
               l> Computer t  OSDisk (C:) ^ Users > gwhelan  t iemTech
   File  Edit   View  Jools   Help
   Organize •*     Include in library
Share with •»•
New folder
             y^ pestL3
              .. SARATimeSeriesUtility
             & SDMPB
             > ^ bin
             t>  . etc
                 TESTA
             N a m e
                . TESTA.OLD
           >>  i, SDMPBJD61215
4.   From the Menu Bar, select "SDMProjectBuilder>New SDM Project".
                       '~
     SDM Project Builder
            Import Local Data Files
            Run Project Builder
            Options

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5.  Create a new file named "TESTA" in the folder "TESTA". Click "Save".

    Specify the name and location of the new project file
                «  SDMPB  > TESTA
                                        Name
                  TESTA_OLD
               i. SDMPB_061215

                 SDMPB.090315

                 SDMPBJ90415

               .. SDMPBJ91115
            Filename:  TESTA
          Save as type: Project files (*.dspx)
    * Hide Folders
                                                                  Search TESTA
                                                                                Date modified
                                                       No items match your search.
                                                              I     Save
6.  A map of the Unites States including Alaska, Hawaii, and Puerto Rico should appear.
File  SDMProjectBuilder Extensions

Li Co   ?!  p^|€ji EZ ^ -•

                 ' Map
  Legend  Selection
                                              E) ^
  a ^ Map Layers
     B 0 States
        n_
     - ? HUC-S
        DM
        DY
     B H Counties
        D
    in
            Ready.   X: -19667879.41607 Y: 2016625.91599 HUC-8:1 feature selected X: -19667879.41607 Y: 2016625.91599 HUC-8:1 feature selected

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7.  Under "SDMProjectBuilder", select "Nav Helper".
   j———^
    SDM Project Builder
 File
!Qt
Legei
B g
    -
      SDMProjectBuilder Extensions
                 Project
          Import Local Data Files
          Run Project Builder
          Options
8.  Whelan et al. (2015b) explains how a user can find a HUC-8 within the United States by zooming in
    on the State and County or directly inputting the HUC-8 identifying Catalog Unit (CU) code. In this
    case, catchments in the Manitowoc, Wisconsin County basin will be analyzed, within the HUC-8
    04030101 near Manitowoc, Wisconsin. Do not close "Navigation Helper" until instructed.
        •    Check the "NHD+" and "HUC-12" boxes
        •    Type "04030101" as the "HUC 8"
        •    Click "Zoom" to the right of "HUC 8".
Whelan et al. (2015b) explains how one labels the HUC-8s with CU codes.
 Navtqation Helper
   Base Layere
     State:
                                    Zoom
     County:  Manitowoc County
                                    Zoom
     HUCS:
     Layere:
              NHD+
                      HUC 12s
                                    Get Data
                                   Show Attributes
                        dose
9.  The appropriate HUC-8 will be highlighted (in blue below) on the screen:

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10.  Click "Get Data".
  Navigation Helper
                                                                                      CZl
       Base Layers
           State:

           County:    Manitowoc County
           HUCS:    :i*
           Layers:
                               NHD+      [71  HUC 12s
                                         Show Mributes
11.  A screen similar to the following will appear.
   SDM Project Buildei
File SDMProjectBuilder Extensions
Q a ,i[j],! « « a © 9 a o ,1 i:
                       M«P
a
                                           i a ^
 B & MapLayeraj _
    m D|caldimenlfofl>m3Q101 |
    ffl S nhd^terbody for 04030101
    ffl [3 nMflm/lim! for 04030101
    H 0 hi*c12 for 040301 01
       D
    B B Counties
       D
           Ready.     X:-9615523,18815 Y; 5436090.71828 nhdwaterbody for 04030101:0 features selected X:-9615523,18815 V: 5436090.71828 catchment for 04030101:0 features selected

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12.  Deselect all map layers except "hue 12 for 04030101".
   SDM Project Builder
File  SDMProjectBuilder Extensions

    -0 ' (_ J  tti <=4 K *)       O

                             Map
  Legend | Setectkm
                                                  D
  B & Map Layers'
     ffi Dlcatdiment for 04030101
     m D nhdwaterbodv for 040301 01
     H C] nhdflowlirKj for 04030101
     B 3 huc12for 04030101

         D
     H D States

         D
     •- L HUC-S.
     :- '   Count.es

         D
  .  ,„
            JReady,        X:-9862164.2612 V: 5436693.01638 nhdwaterbodyfor04030101:0 features selected X:-9S6216-
13. Choose "Close".
Navigation Helper

Base Layers
State: 7JI3X T Zt

County: Hantowoc County -r 2t

HUCS: [gl&lUdl T A
E] NHD+ El HUC 12s Get

om

om

om
Data

Layers: T Show


(^ Dose )

Attributes


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CHOOSE A 12-DIGIT HUC WITHIN A WATERSHED AND COLLEa ENVIRONMENTAL AND SOURCE-TERM
DATA

Choose a HUC-12

14. Choose the "Select" button (red circle), then the appropriate HUC-12 (i.e., headwaters Killsnake
   River) as illustrated below. In this example, you are identifying a single HUC-12 (i.e., headwaters
   Killsnake River) in the Manitowoc Watershed, as highlighted in the figure below; highlight the single
   HUC-12 shown. The SDMPB allows the user to choose any HUC-12. Because it does not account for
   any upstream inflow to the HUC, it is advisable to choose only headwater HUCs when defining a
   single HUC-12. It should be noted that overland flow simulations are not a function of instream flow
   simulations, so these computations are not compromised if a non-headwater HUC is chosen. A
   future plan will allow the user to specify an upstream boundary  condition to address this issue.
   I

   IV
15.  Using the Zoom In button
L, zoom to this area.
   Check the "nhdflowline" Map Layer. If it is not at the top of the listing, move it there to ensure it is
   the outermost projection, and it will appear on the map. To see where the ponded waters are
   located, check the Map Layer titled "nhdwaterbody for 04030101". This provides a full picture of
   water sources and their locations.
                                             10

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Identify and Modify Local Source-term Data

Descriptions of the local source-term data are described in Whelan et al. (2015c). There are 12 default
files located in the "LocalData" directory, as illustrated below:
File Edit View lools Help
Organize •» Include in library •» Shar
TESTA
HSPF-PEST

huc!2

LocalData

, . met

NHDPIus

TESTA_OLD
.. SDMPB_061215
.. SDMPB.090315

,. SDMPB_090415

,. SDMPB_091115
,. SDMPB_093015
SDMProjectBuilder.100214
SDMProjectBuilder.101714
SDMProjectBuilder_111214

'with " Burn New folder
Name

(S3 AnimalLL.csv

(S3 BoundaryPointsLL.CSV

(S3 FCProdRates.csv

03 GrazingDays.csv

y3 ManureApplication.csv

0 MonthlyFirstOrderDieOffRateConstants.c...
(S3 OutputPointsLL.csv

Qai PointSourceData.csv

03 PointSourceLL.csv
(S3 SepticsDataWatershed.csv
(S3 SepticsLL.csv
£3 WildlifeDensities.csv




Date modified

10/5/2015 5:27 PM

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10/5/2015 5:28 PM

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Table 1 summarizes the metadata associated with the parameters contained within each file, including
definitions and units.

These files must be reviewed by the user to ensure they are applicable to the watershed of interest. For
this example problem, the following modifications will be made:

    •  Domestic Animals and Wildlife
           o  Farm locations with domestic animal numbers and types, their production rates along
              with production rates in built-up areas, number of animal grazing days, and fraction of
              animal-generated manure applied to the soil will remain unchanged, as documented in
              the AnimalLL.csv, FCProdRates.csv, GrazingDays.csv, and ManureApplication.csv
              example templates, respectively. The farm  locations reflect actual farm locations within
              the Manitowoc Basin. No changes to any of these files are necessary.
           o  Different first order die-off rates will be used for land-applied  microbes, so
              modifications to the MonthlyFirstOrderDieOffRateConstants.csv example template are
              necessary.
           o  Wildlife densities will be changed to reflect the actual number of deer in this area, so
              the WildlifeDensities.csv example template will be modified.
    •  Point Sources
           o  There will be no point sources. Whelan et al (2015c) describe several ways to exclude
              point sources. The two default point source locations defined  in PointSourceLL.csv just
              happen to randomly fall within our watershed. The user can do any of three things to
              remove the use or impacts of a point source: (1) change Latitude-Longitude coordinates
              to locations outside of the watershed, (2) reduce the point source loadings to de
              minimus levels in PointSourceData.csv, or (3) within HSPF, remove the point source from
              the simulation (see Whelan et al., 2015c). In this example, Latitude-Longitude pairs will
              be changed to a location outside of the watershed. Because only microbes are
              associated with this assessment, the reference to chemicals in PointSourceData.csv will
              be removed.
                                              11

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Table 1. Names of default support files and input types for which the user has access for modifications
FILE NAME
INPUT DATA AND DEFINITION
UNITS
Domestic Animals and Wildlife
AnimalLLcsv
FCProdRates.csv
GrazingDays.csv
ManureApplication.csv
MonthlyFirstOrderDieOffRateConstants.csv
WildlifeDensities.csv
Domestic animal locations by Latitude and
Longitude
Domestic animal numbers by type and
location
Production or shedding rate of microbes
from the domestic animal, which equals
the multiple of the 1) Domestic animal
shedding rate in mass of waste (wet
weight) per time and 2) Microbial
concentration based on mass of waste shed
by the domestic animal
Typical microbial production or shedding
rate per wildlife per area
Number of grazing days per domestic
animal per month
Fraction of the number of grazing days that
Beef Cattle spend in a stream per month
Fraction of manure applied to soil each
month per domestic animal
Fraction of amount of manure shed by the
domestic animal incorporated into soil
First-order microbial inactivation/die-off
rate on the land surface per month
Typical number of wildlife per unit area by
land use type
Degree (by
fraction)
Number
Counts/d/animal
Counts/d/ac
Number
fraction
fraction
fraction
1/d
Number/mi2
Point Sources
PointSourceLLcsv
PointSourceData.csv
Point source locations by Latitude and
Longitude
Annual-average flow for each point source
Annual-average microbial loading rate for
each point source
Annual-average chemical loading rate for
each point source
Degree (by
fraction)
ft3/s
Counts/yr
Lbs/yr
Septic Systems
SepticsLL.csv
SepticsDataWatershed.csv
Septic system locations by Latitude and
Longitude
Number of people per septic unit
Average fraction of septic systems that fail
Average septic overcharge rate per person
Typical microbial density of septic
overcharge reaching the stream
Degree (by
fraction)
Number
fraction
gal/d/person
Counts/L
Intermediate Points
BoundaryPoints.csv
OutputPoints.csv
Boundary point locations by Latitude and
Longitude
Output point locations by Latitude and
Longitude
Degree (by
fraction)
Degree (by
fraction)
12

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    •   Septic Systems
           o   Septic locations and their metadata, represented by SepticsLL.csv and
               SepticsDataWatershed.csv, respectively, will remain unchanged and used as is, since
               these locations reflect actual locations within the Manitowoc Basin.
    •   Intermediate Points
           o   The intermediate Latitude-Longitude locations listed in BoundaryPoints.csv and
               OutputPoints.csv randomly fall within the HUC-12 boundaries.  Because they do not
               impact the simulations, their contents will remain unchanged.


MonthlyFirstOrderDieOffRateConstants.csv


16. Open MonthlyFirstOrderDieOffRateConstants.csv using TextPad, Notepad,  WordPad, Excel, or other
    pertinent editor. Using WordPad, the original file includes die-off rate constants by month with units
    ofd'1:
    MonthlyFirstOr...
  File  Edit  Format View  Help
 Month, Di eof f RateContant
 January,0. 36
 February,0.36
 March.O. 36
 April,0.51
 May,0. 51
 June,0.51
 July.O. 51
 August, 0. 51
 September,0.51
 October,0.36
 November,0.36
 December,0.36
17. Change the rate constants to 0.064 d"1, so the file becomes:
    Month lyFirstOr...
  File  Edit  Format View  Help
 >ionth, Di eof f Ratecontant
 January, 0. 064
 February,0.064
 March,0.064
 April,0.064
 May, 0.064
 June,0.064
 July,0. 064
 August,0.064
 September,0.064
 October,0.064
 November,0.064
 December,0.064
These reflect lower-end values by Martinez et al. (2013) (see Kim et al., 2015).


18. Save as a csv file and exit.


WildlifeDensities. csv


The wildlife densities associated with this region of Wisconsin tend to be dominated by deer, with
typical fall and winter densities of 29 and 21 deer/mi2, respectively (WDNR, 2015). 29 deer/mi2 will be
                                                13

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assumed to be associated with agricultural (pasture and cropland) and forest land types. No deer will be
associated with Built areas. Because recreational activities with beaches typically occur during summer
and fall, fall numbers will be used in this analysis.
19. Open WildlifeDensities.csv using TextPad, WordPad, Notepad, Excel, or other pertinent editor. Using
    Notepad, the original file includes the flowing locations:
  ; WildlifeDensities.csv - Notepad
  File Edit  Format  View Help
 Animal ,DensityPersqMile_cropland,DensityPersqMile_Pasture,DensityPersqMi1e_Forest , DensityPersqMile_Bin~ltup
 Duck,0,0,0,0
 Goose,0,0,0,0
 Deer,5,5,5,0
 Beaver,0,0,0,0
 Raccoon,0,0,0,0
 Otherwlldlife,0,0,0,0
20. Update the file by changing the "5" to "29", so the file looks like the following:
  File Edit  Fcirmat  View Help
 Animal , DensityPersqMi1e_cropland,DensitypersqMi1e_Pasture,DensityPersqMi1e_Forest ,DensityPer£qMi1e_Bui~ltup
 Duck,0,0,0,0
 Goose,0,0,0,0
 Deer,29,29,29,0
 Beaver,0,0,0,0
 Raccoon,0,0,0,0
 otherwildlife.0,0,0,0

21. Save as a csv file, and exit.


PointSourceLL.csv and PointSourceData.csv
22. Open PointSourceLL.csv using Notepad, TextPad, WordPad, Excel, or other pertinent editor. Using
    Notepad, the original file includes the flowing point source locations PT001 and PT002:
  _j] PointSourceLLcsv - No... L
  File  Edit  Fo_rmat  View  Help
 |_at1tude,Longitude,  Ptsrcid
 44.112,-88.256,PT001
 44.06,-88.191,PT002
23. Remove the second Latitude-Longitude pair, and change the coordinates for PT001 to <33.899, -

    83.346>, which happens to be somewhere in Georgia.

    PointSourceLLcsv - Notepad
  File  Edit   Format  View  Help

 I|_at1tude,Longitude,  Ptsrcid
  33.899,-83.346,PT001
24. Save as a csv file, and exit.
                                                 14

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25. Open PointSourceData.csv using Notepad, TextPad, WordPad, Excel, or other pertinent editor. Using
    Notepad, the original file includes the flowing point source locations PT001 and PT002:
PointSourceData.csv - Notepad
File Edit Format V
Ptsrc]
PT001
PT001
PT001
PT002
PT002
PT002
[d,
PO
PO
PO
PO
PO
PO
racName
ntsour
ntsour
ntsour
ntsour
ntsour
ntsour
ew Help
Load, Farm
el.l. FLOW
el, 1000, Microbes
el , 5 , Di azi non
e2,2, FLOW
62,2000, Microbes
e2,4, Diazinon
26. Remove the three lines referencing PT002 and the line referencing the Diazinon loading for PT001.
    The resulting file will look like the following:
   PointSourceData.csv - Notepad
 I File Edit  Format View Help
 ptsrcld, FacName,  Load, Farm
 PT001, Pointsourcel.l, FLOW
 PT001, Pointsourcel.1000, Microbes
27. Save as a csv file, and exit.
Ensure that all revised files replaced the original files contained in the "LocalData" folder under the
working directory.

Import Local Data Files

After replacing the files in the "LocalData" folder within the working folder, these data can be registered
with the SDMProjecBuilder (SDMPB).

28. From the Menu Bar, choose "SDMProjectBuilder", then "Import Local Data Files".
    A screen will appear to allow the user to import 12 "Local Data Files," of which the five files listed in
    the screen below identify specific Latitude-Longitude locations for locations of domestic animals
    (e.g., farms), intermediate points (i.e., boundary conditions, output points), point sources (e.g.,
    POTWs), and septic systems:



Local Data Files
Eloundaiy Points LL
Output PointsLL
PointSourceLL
SepticsLL 2.
Open Rle
Hit Rle |
Start Mding Points
Delete Selected Point{s) cm Map |

dose |
dose File 1


                                                15

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    We will register, as map layers, the following Local Data Files: animal locations (AnimaILL) and Septic
    locations (SepticsLL) which happen to be the same (i.e., farms use septic systems).

29. To register "AnimaILL", highlight "AnimaILL", and choose "Open File".
        Local Data Files
lAnimaILL PV
BoundaryPointsLL
Output Points LL
Point Source LL
SepticsLL
           Start Adding Points
         Delete Selected Point{s}on Map
Dose File
30. Wait until the screen changes, then "Close File."

  M  Edit Local Data                            i *=> I  B
        Local Data Rles

         Boundary Points LL
         Output Points LL
         Point Source LL
         SepticsLL
              Open File
               Edit File
           Start Adding Points
         Delete Selected Point(s}on Map
                                                   16

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31. The map layer for animal locations (typically farms) will appear on the map, similar to that below:
 File SDMProjectBuilder Extensio
   B D nhdwatBFtoody for 04030101
   E D nrtdflowline for 04030101
   B Si huc121or04030101
      n
   H D States
      D
   H D HUC-8
      n«
      DV
   B Q Counties
      D
32. To register "SepticsLL", highlight "SepticsLL", and choose "Open File".
        Local Data Rles
         AnimaILL
         Boundarj'PointsLL
         OutputPointsLL
         Point Source LL
           Start Adding Points
         Delete Selected Pointfe) on Map
                                          Qose File
                                                         17

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33. When the screen changes, choose "Close File."
          Local Data Files
          .Animal LL
          BoundaryPointsLL
          Output Points LL
          PointSourceLL
                 Open File
                  Edit File
             Start Adding Points
           Delete Selected Pointl's) on Map
                                Close
34. The following screen, which includes the Animal (I.e., farm) (dark blue square dots) and septic
    locations (light blue smaller dots) overlaid on each other, will appear.
  SDM Project Builder
File SDMProjectBuilder Extensi

   .a -g]
                    q Q :
   IB LJ catchment for 04030 1 0 1
   B D ntidwatetbodyfor0403010l
   S CH nhdflowiinefor04030101
   B (3;huc12forW0301Ql|
   B D States
      n
   B C! HUC-S
   B D Counties
      n
                        s <* • a k ii.
                        us,
                                                        18

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     Zoom in and view the HUC-12 of interest with animal farm and septic locations:
 File SDMProjectBuilder Extensions
  o  »•[*].:*9,n
 Legend

 B & Map Layers
    B S SepticsLL


    B S AnimaILL

        •
    B D calchmentforD403010t
    ® S nhdwaterbotJy for 04030101
    B S nhdflowlinefor0403O101
    B 0[huc12 for 04030101 j

       D~
    -   -Stales

       D
       HUC B
    -i  Counties
       n
i B O,! (:::t>c
       Map
35.  When complete, "Close" the screen:
     Edit Local Data
          Local Data Files
          AnimaILL
          BoundaryPointsLL
          Output Points LL
          Point Source LL
                 Open File
                  Edit File
             Start Adding Points
           Delete Selected Point Is) on Map
                           Close File
                                                             19

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Run Project Builder and Collect Map Layers Describing Environmental Characteristics

36. A HUC-12 was previously selected. If it was unselected in the meantime, re-select the HUC-12.
 File SDMProjectBuilder Extensions
 B S Map Leyers
   B DiSepticsLL
   B D^nirralLLJ
   H Djcalchment for 04030101
   B Q nhdwatertKXJy for 04030101
   3 Q nhdflowline for 04030101

   B 0 huc12for04030101
      D
   B D Stales
      D
   B D HUC-8
      D"
      D^
   B D Counties
      D
37. From the Menu Bar, choose "SDMProjectBuilder", then "Run Project Builder".
    P——^^^M
     SDM Project Builde
         SDMProjectBuilder  Extensions
                                                  20

-------
    The screen below appears.
    Build Frames SDM Project
    Select Area Of Interest On Map Or Enter Key(s] Below

     Select By:  O HUC-8  0  HUC-12  O Catchment  O County  O Current Map Layer  O Pour Point  O Box
    1 Selected:
     040301010406 : Headwaters Killsnake River
       Single Project       One Project Per Selection
    Because a HUC-12 was previously selected, the "040301010406: Headwaters Killsnake River"
    automatically appears. The software only has been tested for "HUC-12" and "Pour Point"
    assessments, although it should work for HUC-8 assessments since the only essential difference
    between a HUC-12 and HUC-8 is size. If the HUC-12 has not already been selected, select it.

38. Choose "Next", and the screen below appears.
    Build Frames SDM Project
   Parameters For Model Generation

   Q        Minimum Catchment Size (square kilometers)

   5        Minimum Flowline Length (kilometers)

   0.07     Ignore Landuse /teas Below Fraction

   1990     Simulation Start Year

            Simulation End Year
   2CCC
     ! HSPF Output Interval:  Hourly
            Snow:  | No Snow
Microbes

Land-applied Chemical
Chemical Properties
      SWAT  = vVAT 21
                                                                                 Previous
                                                      Next
                                                  21

-------
39. Use the choices and values included in this figure:
    •    "3" for the "Minimum Catchment Size". During delineation, an attempt will be made to
        delineate subwatersheds to at least this sizewhich ensures that modeling very small
        subwatersheds is kept to a minimum.
    •    "3" for the "Minimum Flowline Length". During delineation, an attempt will be made to
        delineate subwatersheds so that river segments have at least this length. This ensures that
        modeling very small river segments  is kept to a minimum.
    •    "0.1" for the "Ignore Landuse Areas Below Fraction". During delineation, land use types below
        this fraction of total land use will be combined. This ensures that modeling de minimus land use
        types is minimized.
    •    "1990" for the "Simulation Start Year" which is the year in which the simulation begins.
    •    "2000" for the Simulation End Year" which is the year in which the simulation ends.
    •    "HSPF" for the watershed model.
           o   "Hourly" for the "Output Interval". Simulations are hourly within  HSPF, but the output
               can be presented  in a number of units such as hourly, daily, weekly, monthly, annually,
               etc..
           o   "Degree Day" for the "Snow" calculation. This option determines if snow accumulation
               and melt calculations are included. Choices are No Snow, Energy Balance method, or
               Degree Day method.
           o   "Microbes" determines if microbes will be simulated. If not chosen, all microbial data
               will be ignored.
           o   "Land-Applied Chemical" indicates there is a chemical application equally applied to all
               agricultural lands within the watershed.
           o   "Chemical Properties" indicates that if a chemical is applied, this button allows the user
               to modify its physicochemical properties.
                                                                                           [Hi
   Parameters For Model Generation

   3       Minimum Catchment Size [square kilometers)
   3       Minimum Rowline Length (kilometers)

           Ignore Landuse Areas Below Fraction
           Simulation Start Year

           Simulation End Year
D.1
159D
   2CCD
      HSPF Output Interval: Hourly

           Snow:
                         JlJ
      SWAT      T
J  Microbes

D Land-Applied Chemical
Chemical Properties
                                   rs gvi'helan 'jemtechnologies ''sdmpb'' bin ''jnodels\SWAT\Databases\swat2005.mdb
Previous

Next
                                               22

-------
40. Pick "Next", and the following screen will appear.
  Data Options
   Soil
  ••  STATSGO
     SSURGO
  Elevation

  Delineation
 Meteorologic
 a BASINS
   NCDC Enter NC DC Token Here
 D NLDAS Precipitation
NHDPIus Elevation

NHDPIus
  Save Project As  C:\Users\gvAelan\iemTecrinologies\SDMPB\TESTA\TESTA.mwprj
    Cancel  |  I  Add Layers To Map During Project Creation
                                                        Previous
                                                                  Build
41. Use the choices and values included in this figure:
    •   Choose STATSGO which is less detailed than SSURGO for soil options.
    •   Choose "NLDAS Precipitation". NLDAS is the North American Land Data Assimilation System and
        contains automatic quality control (QC), uses hourly gauge station data and modeled
        precipitation, provides estimates at hourly intervals with a l/8th-degree resolution, and
        provides precipitation time series at specified locations (Kim et al., 2014). This is used in
        conjunction with NCDC NOAA meteorological data which supplies information for regional data,
        such as air temperature. BASINS uses cached NCDC data up to 2009. For direct access to hourly
        NCDC data, choose "NCDC, but the user must obtain a Token ID. Subwatersheds default to the
        nearest MET station.
    •   Choose the "NHDPIus Elevation" for Elevation and  "NHDPIus" for Delineation.
    •   The name of the file should already be identified, but a different name or location can be
        selected by choosing the name of the file (e.g., *.mwprj) and where it is saved. The .mwprj file is
        a MapWindow (mw) Project (prj) file directly consumed by BASINS. The program will
        automatically identify the  working folder structure the user originally created. If a special
        location and name is chosen, the user may identify a special folder using "Save Project As".
    •   To allow data retrieval, check "Add Layers To Map During Project Creation".
  Data Options
   Soil
  a  STATSGO
     SSURGO
  Elevation

  Delineation
 Meteorologic
«• BASINS
•  • NCDC  Enter NCDC Token Here
0 NLDAS Precipitation
NHDPIus Elevation

NHDPIus
  Save Project As  C:\Users'igwhelan-jemTechnologies\SDMPB\TESTA\TESTA.mwprj

    Caned  I  17, Add Layers To Map During Project Creation
                                                  23

-------
42. Now choose "Build" which may take several minutes to complete, depending on the computer.
43. Processing takes several minutes for a HUC-12.

  SMP 7 at 7 Cmtng HSPF npm
  III
                     II.MIalUMM
    Canal  I   P»u»      Leg
44. Some computers may ask several times if the re-project map layer should match the map coordinate
    system; choose "Yes" each time.
 Projection Mismatch
  Reproject map layer to match the map coordinate system? This will not affect the source file,
                       Yes
                                 No
45. When the SDMPB has finished running, you will see the message below. If the user chooses
    •   "Ok", SDMPB will exit and close down.
    •   "Open Folder", the user will be redirected to the working folder location.
    •   "Open in BASINS", BASINS will automatically open with the SDMPB map layers for this
       assessment.
    When exiting the SDMPB, the following files are created:
       a.  BASINS File: *.mwprj, the MapWindow Project file that contains the conceptual layout and
           map layers of the assessment.
       b.  HSPF-related Files pertinent to these examples include the:
                i.  *.uci file, which is the User Control Input file. It is a flat file containing all non-time
                  series data. The UCI file is the controlling input file for HSPF. Based on choices of the
                  user, the SDMPB  automatically constructs the HSPF UCI file. Appendix A reviews
                  some of the contents of the UCI file related to this tutorial to show where data were
                  captured in this file. It is presented for the more advanced user who is familiar with
                  HSPF and its  UCI file and is not required reading for this tutorial.
               ii.  *.wdm files, which is the Watershed Data Management files. These binary files
                  contain time series data (i.e., weather, input, output, calibration, etc.).
               iii.  *.hbn file, which is the HSPF Binary output file that contains binary output.
    Although not recommended at  this time due to a potential error in DotSpatial, ways that a user can
    view the typical map layers generated by SDMPB are reviewed in Appendix B.
   Finished Building Project
   C:\Users\gwhelan\iemTechnologies\SDMPB\TESTA\TESTA.mwprj|
                Ok
                       Open Folder   Open in BASINS
                                               24

-------
46.  Choose "Open in  BASINS", and the following  screen  appears:
  File  n-.* Watershed Delineation     Models   | Compute  k * Launch     Analysis   Layer  View   Bookmarks   Plug-ins   Shapefile Editoi
                                                                                                             Converters  Help
LI  *   *  •   *   'la   LB
New Open  Save  Print Settings   Add  Remov
                                         an      a    *    »    ifV  «,     n    1'    O
                                        Clear  Symbology Categories  Query Properties Table   Select  Deselect  Measure  Identify La
 | Pan In  Out  Extent Selected Previous Next  Layer   New  Insert  Add R
                                                                                      Erase beneath Move  Rotate Res
 130 VJ Observed Data Statio
       NAWQAStudyAreaUnitSoundsries
       LJ
   BD AccountingUnitBoundaries
       Cataloging UnitBoundaries
       a
   BD County N

   EiD County Boundaries
       m
   BD EPARegion Boundaries
      med ^  X: 631,785.020 V: 2,371,217.467 Meters Lat 44.094 Long:-88.074
                                                                                25

-------
USE HSPF TO SIMULATE THE SDMPB PROBLEM STATEMENT BY PERFORMING AN ASSESSMENT ON A
12-DIGIT HUC

Execute the Assessment with HSPF
47. After clicking "Build" within SDMPB and subsequent processing, the user has a project folder
    containing GIS layers and other project-related files. An example folder structure is developed:
   File  Edit  View  Jools  Help
   Organize ^    ^ Open    Include in library •*•
                                    a= '   a
          i   SDMPB
                                        Name

               etc
                                           HSPF
              TESTA  	
             li HSPF
                HSPF-PEST
                huc!2
                LocalData
                met
                NHDPIus
                NLCD
                          *
  HSPF-PEST
  hud.2
  LocalData
  met
  NHDPIus
  NLCD
  pcs
J_ acc.dbf
 , acc.mwsr
 ,,,
     i
HSPF    Date modified: 10/7/2015 11:04 AM
Filefolder
 1 item selected
                                - "^S=)
                                  _J Computer
Files relevant for HSPF simulation are located in the "HSPF" subfolder.

GQl


« TESTA t HSPF -r 4
[ =
@ |— S3^

t i] SeorrA HSPF
P
File Edit View Tools Help
Organize















i
9 items
*• Include in library •*• Share with * » |iE ^
< J:, SDMPB
bin
etc
•« J. TESTA

i HSPF
. HSPF-PEST

LocalData


NHDPIus

NLCD
pcs
9 items
•* Name
ff ERROR.FIL

a ®



^ 040301010406. uci



,_, O40301010406.seg


EJ ^ 040301010406. ptf
Li 040301010406. rch


,_, O40301010406.wsd
£ met.wdm

- ' I^^T^I



>

	 j Computer ,:
                                                  26

-------
48. The user can open HSPF in one of two ways:

         a.   Use the WinHPSF3.0 icon on the Windows desktop.  Pick the appropriate UCI file or
         b.  From the BASINS menu bar, choose "Models", "HSPF", then "Open Existing". Pick the


	appropriate UCI file.	


 File   Watershed Delinea^T ,'' Models^^: Compute   Launch    Analysis  Layer  View  Bookmarks  Plug-ins  Shapefile Editor Converters Help

     a  ii  •            DO*     *   »   *   R  :  »*,    o   It'   O     +
 New  Open Save Print  Settings  Add  Remove  Clear Symbology Categories Query Properties Table   Select Deselect Measure Identify  Label Mover

 :pfj £j j3 £j   ;r   &  +.. tP i So ^b «»>p  shp   21  Q  •  •         ffi  O  ^    *f*                   ^  ^J,
 [ Pan | In  Out Extent Selected Previous Next Layer  New Insert Add Remc.'.e Cc[.-,  Paste Merge  Erase Erase beneath  Move Rotate Resize Move vertex Add vertex Remove vertex  Cleanup Undo


We  will use the WinHSPF3.0 icon.
49. To open the HSPF project, activate the WinHSPF3.0 icon on the Windows desktop
which opens the main HSPF window:
 __ Hydrological Simulation Program - Fortran (HSPF)
  File  Edit   Functions  Help     J _,'
                                                        27

-------
50. From the "File" menu, choose "Open", navigate to the UCI file, and click "Open".
    Select UCI
        r
               « SDMPB > TESTA  > HSPF
    Organize T     New folder
Jb. TESTA
 ^ HSPF
 Jj HSPF-PEST
 .Jj huc!2
    LocalData
    met
    NHDPIus
    NLCD
 J4 pcs
 SDMPB_061215
 SDMPB_090315
. SDMPB_090415   T
                                    Name
             Date modified
                                       040301010406. uci
            10./7/2015 10:24 AM
                                                     rrr
                     Filename: 040301010406,uci
UCI files r.
                                                                   Open
                  Cancel
51. The new HSPF project will appear in the HSPF GUI, with the watershed workflow schematic shown
    below.

The user may navigate through the HSPF controls to interact with the HSPF project.
                                              28

-------
52. The simulation period is set by the user in SDMProjectBuilder, and output is set at an hourly time
    step. The simulation period can be checked or modified by clicking on the "Simulation Time and
    Meteorologic Data" toolbar button in the HSPF menu bar:
                       a  '         >

  ^Simulation Time and Meteorologic
53. The window below will appear for setting simulation start and end dates.
 4 WinHSPF - Simulation Time and Meteorologic Data

Year Month Day Hour Minute ^
Start (i55 |i |i |5 |0
End: poOO |12 |31 J24 |5

Met Segmen
Add
Connections
MetSegID
X29JY152
X294Y152
X294Y152
X291Y152
X294Y152
X2MY152
X2S4Y152
X294Y152
X294Y152
X293Y152
X293Y152
X293Y152
VTOT/1K1

Edit |

Operation | j^
PERLND 101
PERLND 102
PERLND 103
PERLND 104
PERLND 105
PERLND 106
PERLND 107
PERLND IDS
IMPLND102
PERLND 201
PERLND 202
PERLND 204
pCDiun-m: -
54. The date can be changed, but we will leave the starting and ending dates unchanged for this
    assessment. Click "OK".

55. Save the HSPF project by clicking "File", then "Save" on the main menu bar.

56. To run the HSPF simulation, click the "Run Simulation" icon.
     Run Simulation

As the simulation is executed, the status monitor will appear.
  ) HspfEnginelMet Status Monitor
    Cancel     Pause      Log
                                              29

-------
57. When the simulation is complete, the status monitor disappears. The HSPF subfolder will contain
    additional files such as the .ech, .out, and .hbn files shown below.
              « iemTechnologies > SDMPB  >  TESTA  > HSPF
    File  Edit  View  Jools  Help
    Organize •»•    Include in library f    Share with f
                                                Burn
                                                        New folder
               Kim_Test_Results
           t> Jt pest!3
               SARATimeSerieslltility
           '    SDMPB
                bin
            f> j. etc
            * ± TESTA
                  HSPF
                ,. HSPF-PEST
                  huc!2
                  LocalData
                 . met
                  NHDPIus
                  NLCD
                  pcs
           '•   . SDMPBJ61215
Name               Size
 a_ O40301010406.uci          45 KB
£ ERROR.HL               69 KB
_ HSPF.log               100 KB
® O40301010406.ech          39 KB
,_, O40301010406.hbn       1,588 KB
JTJ O40301010406.out        3,383 KB
£ O40301010406.wdm     13,200 KB
Q O40301010406.psr          1 KB
_ O40301010406.seg          1 KB
_, O40301010406.ptf          2 KB
,_, O40301010406.rch          2 KB
l_j O40301010406.wsd         5 KB
jffj met.wdm            10,560 KB
Date modified
10/7/201511:18 AM
10/7/2015 11:18 AM
10/7/2015 11:18 AM
10/7/201511:18 AM
10/7/2015 11:18 AM
10/7/2015 11:18 AM
10/7/2015 11:18 AM
10/7/201510:24 AM
10/7/2015 10:24 AM
10/7/2015 10:24 AM
10/7/201510:24 AM
10/7/201510:24 AM
10/7/2015 10:23 AM
Type
UCIFile
RL File
Text Document
ECH File
HBN File
OUT File
WDM File
PSRFile
SEG File
PTFFile
RCH File
VVSD File
WDM File
            13 items
 13 items
                                          _ I Computer
Note that the HSPF binary output file (.hbn) in this example is roughly 1.6 Mb in size. The file size could
be an issue for long simulation periods, as the size may approach a limit of 2.0 GB.

58. Save the HSPF project by clicking "File", then "Save" on the main menu bar.

Leave the HSPF workflow schematic screen open, as you may want to refer to it when operating in the
BASINS interface.

Register the HSPF Simulation with BASINS

59. If BASINS is not already open, start BASINS with the BASINS 4.1 icon on the desktop in  order to view
    results of the simulation:
                                                     30

-------
60. At the "Welcome" window, choose "Open Existing Project".
  I Welcome to BASINS 4.1
                      Build New Prciest
                      View Documentation
                      Open Existing Project
                        02060006
      ] Show this dialog at startup
       dose   I
61. Navigate to the project folder (e.g., TESTA), and select the *.mwprj file. Note that the name of the
    file reflects your selection. Be certain the file name you assigned to your assessment matches the
    *.mwprj extension. An example:
                                                 «
         In5tall_SDMPB_101714
         Inst3ll_SDMPB_102314
         InstalLSDMPEJ11214
         Kim_Te£t_Results
         pest!3
         SARATimeSeriesUtility
      '  SDMPB
       > J, bin
       '  TESTA
           HSPF
           HSPF-PEST
                                " \ MapWindow Project Files f.rr
                                    Open   |  Cancel
62. Click "Open" so the SDMPB project will open in BASINS 4.1. Although all SDMPB map layers may not
    be displayed within the SDMPB interface, they are visible as BASINS map layers, and data are
    available in BASINS for HSPF simulations. The following screen including domestic animal and septic
    locations, which overlay each other and NLDAS stations will appear:
                                                  31

-------
LABEL SUBWATERSHEDS, RIVER REACHES, MET STATIONS
To plot results effectively, the user must identify subwatersheds (i.e., subbasins), stream reaches, and
MET stations, etc. with aunique identifier. This section reviews labeling protocols for subwatersheds,
river reaches, and MET stations.

Increase the NLDAS Symbol Size

63. It is hard to differentiate NLDAS MET stations from the domestic animal/septic locations, so
        •   uncheck the other map layers since NLDAS symbols may actually be hidden behind other
           symbols and
        •   increase the size of the NLDAS symbol by double-clicking on the NLDAS Grid Center symbol
	(see blue arrow):
                     •4-jl.w L^B
64. The screen below appears; change the "Size" to 20, and click "Ok".
 Point style
   Preview

    Fore color
                    iSy^oJsjl Characters | Icons | Options
                       Point shape
                                  Regular
                       Number of sides
                                            Side ratio 5
                       Transparency
                                                         255
                                               32

-------
     The following screen appears with larger symbols for the NLDAS stations:
      .l -TESTA'
 F,lt   Watershed Delineation


: LI  *  fc  •  *
 New Open  Save  Print Settings
  ;:   =   a    1    m   I*   *       -i,
  Add Remove Clear  Symbology Categories Query Properties Table  Selet

 &  & lit '• feS  £  shp  slip  -jj  ' J •  J
Previous Ne.it Layer  New Insert Add  Removt Cap;  Paste Merge t>;.- '-
 i'   O    T.
Measure Identify Label Mover
                                                                 Move Rotate RFJI^C Move vertex Add vertta Rem
                                                                                                Cleanup  Undo
 !=! I?" L_> Observed Data Slatio
  B n Weather Station Sites 2006

  an Septic




  an Animals

     *

  an PointSources

     *

  an NAWQA Study Area Unit Boundaries




  EH Accounting UnitBoundanes




  an CatalogingUnitBoundane;




  BD County Names



  BD County Boundanes




  an EPA Region Boundaries




  an Slate Boundaries




  nn Major Roadi













  an State SoiI




  B 0 Smolitied Flo*ine








  an Area of Interest
 J] unnamed - X: 629.849.875 V: 2.371,204.561 Meters lat 44.096 long:-88.098
                                                                                         1«27S8
65. By clicking "File," then "Manage Data" on the menu bar, we can see that the MET data are loaded

     into the project and there are  14 MET time series in the file.
     Data Sources
                                                                                                               (=1
    File    Analysis    Help
       i--C:\Users\g,vhdan\iemTechnologies\SDMPBrrESTA\rneftir>et.v,dm [14}
66. Choose "File", then "Exit" to return to the main screen.
                                                                 33

-------
Label and Color-code MET Stations

67. To Color-code the MET stations, double-click "NLDAS Grid Center" label (see blue arrow in screen
	below)
   ta fc • B  ;: a  D   I   »%**•*,  ,il>e  1
 M. 0«~ iM Ulrt Smnv HU *«m O«. fenMUn CjugHW Qwy Prof*..* 1MU Mlw .'. M MHWM H«*. UM Maw
 *.-.;:«,  i   »i                      +   .•   .-   • s.
 **•*&* E«M --.v,! fnweu r.M Llpr Nn. - -.! JbM > „.	 Pwt M*tl )>M !.«.MM»> MA. !>•». Ituu HMMIB 1M>*W f.™.. ..rn OHM* IMa
68. Choose "Categories" tab, and
        1.   check "Unique values"
        2.   select "LOCATION"
        3.   check "Gradient"
        4.   choose "Color scheme"
        5.   click "Generate"
        6.   check the boxes with non-zero counts
        7.   choose "Apply"
 Layer properties: NLDAS Grid Center
   General I Mode I Appearance |[Seg
                                                  34

-------
69. Choose "Labels", then "Setup."
 Layer properties: NLDAS Grid Center
   General | Mode | Appearance | Categories |  Labels  Charts | Visibility |
      Labels preview
       Appearance
            Labels visible     _1 Frame visible
         10   [^  Size
                                                      Apply
                                                                      Ok
                                                                                   Cancel
70. Double click on "Location", then "Ok."
 Label style
     Preview
                    •X294Y152
           Labels visible


                  Font size
       Transparency
    Expression is correct

                               255
Expression  Font   | Frame | Position | Visibility | StyteT
                                           Expression
                                          [LOCATION]
                                           Fields
                                          LOCATION
                                         Example
                                         [Area] + "ha" +
                                         [PopulationI/1000 + "thsnd."

                                         Description
                                         [Area] -the name of field
                                         "ha" -string constant
                       Apply
Ok
Cancel
71. Choose the Position, then click "Ok."
                                                      35

-------
.a be! generation
Position
HLTIIZ]
HHB
[ Ok ~\ [ tjnca ~|
72.  Click  "Ok."
  General | Mode \ Appearance [ Calegones ! Labels | Charts j ViaibiBy

     Labels preview
        . Labels visible   PI Framewsible
 The  two  MET stations that influence the seven subwatersheds are now  labeled and color-coded  (one
light  red and one purple).
  File m Watershed Delineation  ufl Models  igsl Compute  itfl Launch  »•-< Analysis   Layer   View  Bookmarks  Plug-ins  Shapefile Editor  Converters  Help
 ; LI  *  *  •   a   • LH   IB  LQ     i      a   »    !*   ft  •  <*,     o    at'    e       +
  New  Open  Save  Print Settings   Add  Remove Clear  Symbofogy Categories Query Properties Table   Select Deselect  Measure Identify  Label Mover
     | In  Out  Extent Selected  Pre
                                ,    £  ;ia  £ ^   &   .    Q  •  •            *K  o   ^    «f»      •*               •
                                Next  Layer •  New  Insert Add  Remove Copy  Paste  Merge Erase  Erase beneath  Move  Rotate  Resize Movevertex Add vertex Removevertex  Cleanup
 Layers  Tooftxaj	
 iill? ,_j Observed Data Slat
      NLDAS Grid Center
      Categories. LOCATION
      ^ X293Y1B2
      ^ XZ94Y152
   aD Weather Station Sites 2006
   HD Septic

   BD Animals

   BD Point Sources
       *
   BD NAWQAStudyAreaUnitBoundar
      CH
   aD Accounting Unit Boundaries

   3D Cataloging UnitBoundaries

   EH County Names

   BD County Boundaries

   BD EPARegionBoundaries

   3D State Boundaries

   aD Major Roads

   3D Ecoregions [Level (Iff
      EH
   ED LmndUselndex
      EH
   BD Slate Soil
      EH
   BS SimplifiedFlowline

   B0 Simplified Catchment
   unnamed -  X: 623,235.503 Y: 2,369,926.002 Meters Lat: 44.085 Long: -88.107
                                                                                                                            ; 1:62758!
                                                                                 36

-------
Correlate MET Stations with Subwatersheds

73. To see which subwatersheds (i.e., subbasins) are associated with which MET stations, double-click
    on "Simplified Catchment" (see blue arrow in figure below):
I BASINS 4.1 - TESTA' »
 7| unnamed ' X; 629,235503 Y: 2,369,926.002 Meters Lat 44,085 Long: -SS107
74. The following screen will appear:
 Layer properties: Simplified Catchment
   General  Mode  | Appearance | Categories | Labels | Charts | Visibility
        Layer visible
Show preview
                                              Name
                                              Simplified Catchment

                                               Source
                                              Type: polygon shapefile
                                              Number of shapes: 7
                                              Selected: 0
                                              Source: C:\UsersXgwhelan'JemTechnologies'1-^DMPB
                                              \TESTA\N H DPIus\nhdplus0403Q101 \drainage
                                              '••Lisecatchment No Short .shp
                                              Bounds X: 613755.11 to 625694.96 m
                                              Bounds Y: 2365124.84 to 2376405.15m
                                                                               Projection
                                               Description
                                                                     Ok
                                                                                  Cancel
                                                          37

-------
75. To color code subwatersheds to match the color-coded MET stations, choose the "Categories" tab,
    and
        1.  check "Unique values"
        2.  select "ModelSeg"
        3.  check "Gradient"
        4.  choose "Color scheme"
        5.  click "Generate"
        6.  check the boxes with non-zero counts
        7.  choose "OK"
  Layer properties: Simplified Catchment
   I General _ Mode  Appearance Categories Labels | Charts | Visibility |

                 Qassification         Color scheme

                 , Categories
                    I   I  Unclassified

                  ffl \IZZ1  X293Y152
                    I   I  X234Y152
76. From the resulting image, you can see that the subwatersheds have been color-coded with the
    nearest NLDAS locations.
Appendix C illustrates how the HSPF UCI file captures and assigns the two NLDAS stations to the
subwatersheds.
                                                38

-------
Label Stream Reaches
77. To label the stream reaches  so they match the number scheme in the HSPF workflow, double-click
     on the map layer "Simplified flowline"  (the blue arrow in the screen capture  below):
ijj| BASINS 4,1 - TESTA*
  File   Watershed Delineation
      Si  li  s         ::   a
  New Open  Save  Print Settings  Add Remove
                             am      »"**!••;**,   : a   Bt»   O      +
                            Clear  Symbotogy  Categories  Query Properties Table  - Select Deselect Measure Identify  Label Mo\
In | Out  Extent Selected Pre

joobmc]
 B0L_> Observed Data Stalior
   00 NLDAS Grid Center
      Categories: LOCATION
      + X233Y152
      ^ X294Y152
   E D Weather Station Sites 2006
   BD Septic
      *
   BE] Animals
      »
   B[~l PointSources
      *
   E]D NAWQAStudy Area UnitBouridar
      EH
   BLl Accounting UnitBoundaries

   BD Cataloging UnitBoundafies
      ca
   BD County Names

   HD County Boundaries
      CH
   G[7J EPARegion Boundaries
      cn
   BD State Boundaries
      EH
   EID MajorRoads

   BD Ecoregions (Level Illi
      EH
   BD LandUselndex
      EH
   BD State Soil
      EH
   B[7| SimplifiedFlowlina ^^

   i'^'P Simplified Catchment
                            Next Layer  New Insert Add Remc
                                                           Paste Merge Era
                                                                        Erase beneath Move Rotate Resize Movevertex Add vertex Rer
 J unnamed » X: 630,264592 V: 2,367,501.722 Meters Lat 44.062 Long:-88.097
                                                                                                              ; 1*2753
78.  Choose the "Labels" tab, then "Setup":
 Layer properties: Simplified Catchment
       [3 Labels visible    Q Frame visible


       |T°   ^1 ^e    ILZ 'I
                                                                     39

-------
79. Under "Expression",
        •    choose "SUBBASIN" under "Fields"
        •    change the Font size to 20.
        •_   click "Ok"

 Label style
    Preview
                6
         Labels visible
      20       Font siz
      Transparency
    Expression is correct

                          255
Expression  Font  | Frame | Position | Visibility | Styles
                                    Expression
                                   [SUBBASINI
   Fields
  AREAWTMAP
  AREAWTMAT
  CUMLENKM
  LOCDRAINA
  Boundary
                                                                                  Qea
  LEN2
  LAREA
  TAREA
  TAREAACRES
       [  + | [ " " | |   NewLine

      Example
      [.Area] + "ha" +
      [Population J/1000 + "thsnd."
f~t    Description
      [Area] -the name of field
 T    "ha" - string constant
                                                                    Ok
                                                                                 Cancel
80. Choose "middle segment" for the location of the label and click "Ok".
  Label generation
                                                      LEJ
     Position
          (_) First segment

             Last segment

          a  Middle segment

             Longest segment
        Orientation neattive to line    Parallel
            Label every part of shape
                                     Ok
                    Cancel
                                                     40

-------
81.  Click  "Ok"  again,  and the stream reaches are labeled.
 I fiASINS 4.1 - TESIA"
                                                                                                  Shapefile Editor   Converters   Help
                                                                                                   at'     e       +
                                                                                                  Measure identify  Label Mover
      Open  Save Print  Settings   Add Remove Clear  Syrnbology  Categories Query  Properties Table   Select


     | In | Out  Extent Selected  Previous Next  Layer  : New Insert Add  Remove  Copy  Paste  Merge  Erase  Etsse beneath  Move Rotate Resize  Movevertex  Add vertex Removevertex Cleanup Unc
       ^  X294Y152
   Bun Weather Station Sites 2006
   an sepsc
        *
   HP Animals
        *
   3D PointSources
        *
   Bn NAWQAStudyAreaUnitBour
       n
   BO Accounting Unit Boundaries


       a °gm
   BD Counly Names

   BD County Boundanss
       CH
   BD EPARegionBoundaries
       r   i
   BD State Boundaries
       a
   QIl Major Roads

   BD Ecoregions (Level IB)
       CH
   BD LandUselndex
       Simplified Flo-Aline
   EM Simplified Catchment
       a
       Categories ModelEeg
       II X293Y152
       f   | X294Y^
   BD Area of Interest
   unnamed  -  X: 627,442.200 Y: 2,365,210.279 Meters Lat 44,044 Long:-88.135
                                                                                             41

-------
VIEW SIMULATION RESULTS FOR FLOWS AND MICROBIAL DENSITIES USING BASINS

There are two ways to view HSPF simulation results: create a graph of the output time series or view the
time series in tabular form. The following related topics will be covered:

    •   Register HSPF Simulation and Data Files
    •   View Graphical Simulation Results for Hourly Discharges at Multiple Locations
    •   Modify the Look and Feel of the Graphical Plots
    •   View Simulation Results for Hourly and Daily Discharges at the Same Location
    •   View Microbial Simulations: Time Series of Microbial Densities at Multiple Locations
    •   View Tabular Results Associated with Hourly Discharge and Microbial Density Simulations

Register HSPF Simulation and Data Files

82. Go to the "File", then "Manage Data" menu. The user may see a pre-loaded met.wdm file, as
    illustrated below. Time series data sources from the HSPF simulation are needed for viewing
    simulation results, so they will be added.
    Data Sources
    File   Analysis   Help
      :....C:l',Users'^whelan''.iemTechnologies'lSDMPBl,TESTA\met\met.wdm(14)
83. The WDM file associated with the watershed of interest contains time series data. From within the
    Data Sources window, select "File", then "Open". A selection window like the one below appears.
  I Select a Data Source
    ;• Basins Observed Water Quality DBF
    - QiGen Output
    ••HSPF Binary Output
     Integrated Surface Hourly Data
     NASA 60S File
     NOAA Hourly Precip Data. Archive Format. TD-324Q
    - NOAA Summary of the Day. Archive Format. TD-3200
    •• • Read Data With Script
     STORET Water Quality
     SWAT Data files
     SWAT Output DBF
     •SWMM Input
    •• • Timeseries DBF
     Timeseries EXCEL
    - Timeseries SWMM5 Output
     LISGS RDB File
     WRDB Archive
84. Select "WDM Time Series", then "Ok".
                                                 42

-------
85. Navigate to the HSPF project folder, and select the *.wdm file (not met.wdm) associated with your
    assessment. Here, it is 'O40301010406.wdm'. This file contains the output time series written from
    HSPF to the WDM file.
Select WDM Time Series file to open [ ? J[X]
Look in:

& HSPF v, Q $ :. » ^

1 •• T10403010 10406. wdm B
L -J$
My Recent
Documents
m
Desktop
My Documents
P
My Computer
*3
My Network
|>1met.wdm

Filename: 040301 01 0406. wdm [ Open
Files of type: WDM Files (".wdm) Cancel

86. With this data source open, the file name will appear in the Data Sources window.
[Note: There may be other WDM files already registered in the list, but do not select met.wdm.]
     Data Sources
    File   Analysis   Help
   B-WDM
      U€:\Users',gwhelan'i,iemTechnologies'vSDMPBl',TESTA\rr^et\rriet.wdm(14]
         .:\Users\gwhelan\iemTechr»ologies\SDMPaTESTA:',HSPF'l.0403010104.
  Timeseries::WDM
  C :\Usera\gv^dan\iemTechnologies\S D M P BYTESTAXH S P FX040301010406. wdm
  49 Timeseries
  13.516.800 bytes
  Modified 10/7/2015 11:18:06 AM
87. The HSPF Binary file (*.hbn) only exists after execution of HSPF; hourly data associated with the
    "RO" designation (Reach Outflow) are associated with the *.hbn file. To view results of the Microbial
    simulation, the HSPF binary output file must be added to the current BASINS project.

88. From the "Data Sources" window, choose the "File", then "Open" again.
                                               43

-------
89.  Select "HSPF Binary Output", then "Ok".
    Select a Data Source

  B  File
       Basins Observed Water Quality DBF
       CliGen Output
       Integrated Surface Hourly Data
       NASA GDS File
       MOM Hourly Precip Data, Archive Format, TD-3240
       NOAA Summary of the Day, Archive Format, TD-3200
       Read Data With Script
       STORE! Water Quality
       SWAT Data Files
       SWAT Output DBF
       SWMM Input
       Timeseries DBF
       Timeseries EXCEL
       Timeseries SWMM5 Output
       USGSRDBFile
       WDM Time Series
       WRDB Archive
                              |     Ok    ] [    Cancel
90.  Navigate to the HSPF project folder and select the file with the HBN extension.
    My Recent
    Documents
     [gf
     Desktop
  My Documents
   My Computer
               File name:
   My Network    Files of type:
                            040301010406. hbn
                            HSPF Binary Output Files (".hbn]
                                                                      gpen   J
91.  Click "Open". Because of its large size, the HBN file may take time to read.

92.  Once the file has been read,  it appears in the Data Sources window.
    Data Sources
   File   Analysis   Help
   B..WDM
      i....C:\Users*gwhelan'l.iemTechnologies'',SDMPETESTA\met\met.welarfJemTechnologies>SDMPB\TESTA\HSPF\D4030101 MOS.wdm (49)
   r-i-HSPF Binary Output
        ::\UsersVrjwhelsr!\iemTechm3losies',SDMPBUESTA\HSPFt,D4D301010406.hbrj (1360
  Timeseries::HSPF Binary Output
  C:\Users\gwhelan\iemTechnologies\SDMPB\TESTA\HSPPJM03010104G6.hbn
  1,360 Timeseries
  1,625,282 bytes
  Modified 10/7/2015 11:18:06 AH
                                                           44

-------
93. Close the Data sources window and save the BASINS project by clicking "File", then "Save". Exit the
    screen.
Appendix A showed that the EXT TARGETS block within the HSPF uci file specifies which time series are
output. Instream hourly time series for flow (RO) in ft3/s and microbial densities (DQAL) in Cells/L are
published for each reach (RCHRES).

View Graphical Simulation Results for Hourly Discharges at Multiple Locations

Previously, HSPF captured the modeling workflow within its graphical user interface as
                       '•
These reaches (RCHRES) correspond to the BASINS schematic, reach number by reach number, as
follows:
                                                       un
                                             45

-------
Hourly flow and microbial densities will be viewed at multiple locations; in this case, Reaches (i.e.,
RCHRES) 3 and 7. The reach ID numbering scheme correlates to the site layout in HSPF, as illustrated in
the HSPF workflow below.
1
I
I
I

-.'•: . - "
^™«_'
Earier, « Mm
Forest
:=----
Grass Law
^^,,,-P-
^^•1
no

Lj

94. Within the BASINS user interface, choose "Analysis", then "Graph".

  y? Analysis   Layer   View    Bookmarks    Plug-ins
       Data Tree
       DFLOW
       Climate Assessment Tool
       List
       Graph
      Watershed Characterization Reports
      Synoptic
      Seasonal Attributes
      Reclassify Land Use
       Projection Parameters
       STORET Homepage
       Standard Industrial Classification Codes
       Water Quality Criteria 304a
      Watershed Characterization System (WCS)
      USGS Surface Water Statistics (SWSTAT)
                                                  46

-------
95. The screen  below will appear.
 ,Ji  Oil !
 MOW010406

 COMPUTED
 0»lt«VtO
                                                          V  CcmtUuvf

                                                          »»  QIOfM.

                                                              RCKNFf
                                                              RETS
                                KM*
 CMCTjmCrlDHt
040W10IMM
(*XMflOtO«W
040301DIOWE
CUOB1010KK.
                                MS
                                ft*
                                Ft 7
                                Fit
                                                              RO
                                                              RO
                    FU
                    FW


                                                                               II   c»«i   I
96. To know the time units associated with the plotted results,
           •     choose "Attributes",
           •     then "Add"
           •     then select "Time Unit"
   File   Attributes  Select   Help
  Select /Wifbule Values to Filer Available Data
  Scenario
                    '  Location
                                                             -  TmeUni
 04030101
 040301010406
 COMPUTED
 NLDAS
 OBSERVED
                   *  1:102
                     1:202
                   = | IMP102
                     IMR202
                     P:101
  Hatching Data (1429 of 1429)
  OBSERVED
  COMPUTED
  COMPUTED
  COMPUTED
  OBSERVED
  OBSERVED
  OBSERVED
  OBSERVED

  Selected Data (0)
                     W147156S
                     W1471568
                     WI471568
                     WI471568
                     WI473269
                     WI473269
                     WI473269
  Start none

  End none

     Apply month/day range to each year

  Li Change Tme Step To:  1    I Day
ASMS
AIRT
                                          PREC
ATEM
PEVT
PREC
PREC
WIND
SOLR
                                  T  Average/Same
  Attribute
] I Boundary Day
  Boundary Month
  Clntvl
  QiGen Out
  OiGen Farm
  Constituent
  Data Source
  Data Tolerance
  Description
  Elevation
  History 1
  ID
  ISTAID
  Include Daily
  Include Hourly
  Intvl
  Lattude
  Location
  Longitude
  NDay
  Num Years
  Operation
  PRECIP
  Point
  Return Period
  STANAM
  Scenario
  Section
  Start Year
  Summary File
  TGROUP
  TSBYR
  TSFILL
  TSFORM
  TSTYPE
  E55E3
  UBC190
  UBC200
                                                                       47

-------
97. The following screen appears.
g| Select Data To Graph


1 ° I B !•£*-!
File Attributes Select He p
Select Attribute Values to filter Available Data
[ Scenario ^ ]
04030101 ••
040301010406
COMPUTED '-
NLDAS
OBSERVED
Matching Data (1429 of 1423)
OBSERVED
COMPUTED
COMPUTED
COMPUTED
OBSERVED
OBSERVED
OBSERVED
OBSERVED
Selected Data (0)
Dates to hdude
Location
:102
:202
MP1C2
MP202
P101

WI471568
WI47156S
WI471568
W147156S
WI473269
WI473269
WI473269
W1473269


"\ [Constituent
• AGWET
Q AGWI
AGli/0
AGWS
AIRT

PREC
ATEM
PEVT
PREC
PREC
ATEM
WIND
SOLR


-][T«rieUnJ
• Hour
III Day
Month

T

Hour
Ho.,
Hour
Hour
Hour
Hour
Hour
Hour


fljl | Common |
Start none none
End none none






H Apply month/day range to each year
G Change Time Step To: 1
Oir,

^ Average/Same ^

| Ok | | Cancel
As noted earlier, the constituent name for the instream hourly time series for flow in ft3/s is "RO" and
the constituent name for the instream hourly microbial densities in Cells/L is DQAL. Each is published for
the subwatershed location RCHRES which corresponds to hourly time units.
98. To plot the flow information, scroll down and select "RO" under "Constituent".
 4 Select Data To Graph
  File  Attributes  Select  Help
  Select ^tribute Values to filter Available Data
 Scenario
 04030101
 040301010406
 COMPUTED
 NLDAS
 OBSERVED

 Matching Data (14 of 1429)
 04030101
 04030101
 04030101
 04030101
 04030101
 04030101
 04030101
1:102
1:202
IMP102
IMP202
P:101
RCH5
RCH1
RCH4
RCH6
FtCH3
RCH2
RCH7
R:5
            none
  LJ Apply month/day range to each year
  D Change Time Step To:  1   I Day
RO
RO
RO
RO
RO
RO
RO
RO
        f\ ] Average/Same
Hour
Hour
Hour
Hour
Hour
Hour
Hour
Month
                                                       48

-------
99.  A list of reaches with flow data appears under 'Matching Data'. Choose RCH 3 and RCH7, whose
     selection will appear in "Selected Data":
  File Attributes  Select  Help
 Select ^tribute Values to filter Available Data
 Scenario
040301D1

040301D1EW06
COMPUTED

NLDAS

OBSERVED


Matching Data (14 of 1429)
04030101
04030101

04030101

04030101
             =1 IMP102
               IMP202
               P.101
               RCH5
               RCH1
               RCH4
               RCH6
 Selected Data (2 of 1429)
 04030101          RCH3
 04030101          RCH7
 Dates to Include
    [  All   ] [ Common
 Start 1990/01/0!  1990/01/01    1990/01/01

 &d 2000/12/31  2000/12/31    2000/12/31"

   Apply month/day range to each year
  •" Change Trme Step To:
              1
                 I Day
                                          How
                                          Hour
100.    Click "OK" and the graph selection window will appear.
 __ Choose Graphs to Create
     Timeseries
  Q Flow/Duration
  Q Frequency
  Q Running Sum
  G Residual (TS2-TS1)
  Q Cumulative DiftereriLe
  n Scalier (TS2vsTS1)
101.    Select "Timeseries", then "Generate" to produce the graph below. The discharge was previously
     defined as cfs (ft3/s).
File Edit View
1,000
900
800
700
0 600
5 500
o 400
300
200
100
*„„»,„ CM,m,,» H,lp
	 HOURLYQ4030101ROat
HOURLY04Q30101 ROai






' ,^U







JCH3







j | |








i


















1990 1991 1992 1993





























i









JLi











1994 199S 1996 1997 1998 1999 2000
HOURLY

102.    Both hydrographs are plotted together.
                                                           49

-------
Modify the Look and Feel of the Graphical Plots
If the user wishes to have individual plots, reaches can be selected one at a time for plotting. In the
meantime, we will modify the graph, one at a time, and plot them, so results are easier to view.

103.    To better differentiate the plots, the y-scale can be changed and curves assigned different
    colors. Choose "Edit", then "Graph".
The screen below appears.
        11 Curves | Lines  [Legend | Tsd
     Axis

     Type

     Title
a  Bottom X     LeftY   O Right Y    Q Auxiliary Y

(a) Time       Linear     Logarithmic     Probability

 HOURLY
                                                             Font
     Zoom Range  19BS/12/31      to  2000/12/31     Q Reverse

     Major Units  [7J tics  S grid     Grid Color
     Minor Units  [7J tics  L7J grid     Grid Color
                                  Font
                                         D Apply Automatically  |   Apply
104.    To change the ranges and titles of the x and y axes,
        •   Choose "Bottom X", change the Title to "Year", and choose "Apply"

     Zooafeng*  1M9/1Z01      to
     M«orUtt   / bo  / gnd     OndCoter
     MnorUnt*   /DC*  / gnd     GndCokr
                                                  50

-------
        •   Choose "Left Y" and "Linear", change the "Zoom Range" minimum to 0 and maximum to
           100, change the Title "Hourly Discharge (ftA3/s), and choose "Apply".
    Axes

     Axis

     Type

     Title
     Curves | Lines  | Legend | Text
          O Bottom X  o  LeftY   O Rght Y    • i > Auxiliary Y

             Time     ® Linear      Logarithmic     Probability

           Hourly Discharge fT3/s)|
                                                                Font
Zoom Range  0
                             to  100
     Major Units   [7] tics  0 grid      Grid Color
     Minor Units   \J\ tics  O grid      Grid Color
Reverse
  Font
                                              Apply Automatically     Apply
105.    The screen becomes
        Analysis (1996 0« 11,12.365) Help
106.    To change color and label for the RCH3 curve,
        •   select "HOURLY 04030101 RO at RCH3" under "Curve".
        •   under "Color", select Blue, then "Ok".
        •   under Label, change the name to "Hourly Discharge Reach 3".
        •   click "Apply".
•1 Edit Timeseries Graph

fixes \ Curves [ Lines Legend | Ted

Lsbel HOURLY" K"2C1u1 ROat RCH"
YAns 9 Left • Right Auxiliary
S Line Width 1 Solid ^ RearwardStep
0 Symbols Size 7 None -r Fill
D Apply Automatical^ | frply


Color le^-l
Base colors:
• r r • r • r r
•rrBFBBB

BBBBBFBF
Custom colora:
rrrrrrrr
rrrrrrrr
[ Define Custom Cok»ra» j
[ OK ] | Cancel
•fl Edit Timeseries Graph • i"^1 1 ^ ^^••1


ft^s Curves ; Lines | Legend | Text



Curve HOURLY M0301D1 ROat RCH3
Label Hourly Dishcharge Reach 3|
Y AMS » Left C_> Right • ~ • Aualiary
Color ^^^^
iZl Line Width 1 Solid ••• RearwardStep
:/i Symbols Size 7 None

, . Fill
a^^ca, f^O

                                                 51

-------
107.   To change color and label for the RCH7 curve,
       •   select "HOURLY 04030101 RO at RCH7" under "Curve".
       •   Under "Color", select the Red, then "Ok".
       •   Under Label, change the name to "Hourly Discharge Reach 7".
       •   Click "Apply".
           Click the upper right-hand corner "X".
           Hourly Discharge Reach 7
Axes  Curves  Lines | Legend | Text

Curve

Label     Hourly Discharge Reach 7

TAxis    'Si Left   Q Right  r Auxiliary
Color
    : Line   Width  1

    '. Symbols Size   7
                    Solid
                               •r  RearwatdStep
                              i I Apply Automatically
108.    Modifications to the plot are:
As one can see, discharges increase from Reach 3 to Reach 7 as the flow moves downstream.

View Simulation Results for Hourly and Daily Discharges at the Same Location

109.   To overlay the discharge time series for daily average flows, which represent average flow for
    each day (sum of hourly flows divided by 24), from the BASINS user interface, choose "Analysis",
    then "Graph" from the menu.
Analysis
Data Tr
CFLCV.
•

1


m
Climate
List
Graph
Layer View Bookmarks Plug-ins
•e
Asse



.mentTocI


Watershed Characterization Reports
Synopti
Season

lAttr
•1 ReclassifyLar
w| Projection Pa
k.1 STORFT Horn

iute^
dUse
ameters
epags
' Standard Industrial Classification Codes
W< Water Quality Criteria 304a
m
Watershed Characterization System (WC5)
USGS Surface
Water Statistics (SWSTAT) »•
                                                52

-------
110.    Using a similar procedure as before,
        •   Select "RO", then "RCH7" (RO and Hour) under Matching Data section
        •   Select "FLOW", which is the daily flow, under the Constituent section, then "RCH7" (FLOW
            and Day) under the Matching Data section
 ii| Select Data To Graph
  File  Attributes  Select  Help
 Select ^tribute Values to Filer Available Data
 Scenario
              T Location
 04030101
 040301010406
 COMPUTED
 NLDAS
 OBSERVED

 Matching Data (17of 1429)
* 1:102
~] 1202
= IMP102
_l IMP202
  P:101
LJ GAGE
  GWVS
  HRAD
  HTEXCH

 0*030101
 WM0101
 04030101
 M030101
 04030101
 04030101
  RCH5
  RCH1
  RCH4
  RCH6
  RCH3
  RCH2
  RO
  RO
  RO
  RO
Hour
Hour
Hour
Hour
Hour
Hour
 Selected Data (2 of 1429)
 04030101
 04030101
  RCH7
  RCH7
                               FLOW
                 Hour
                 Day
 Dates to Include
    |   All  |  | Common ]
 Start 1990/01/01  1990/01/01
 End 2000/12/31  2000/12/31
 [_\ flptfty month/day range to each year
 T j Change Time Step To: 1    Day
111.    Click 'OK'. A graph selection window appears.
ijjf Choose Graphs to Create

[_c

3 S I^^M


2 Timeseries
3] Row/Duration
_| Frequency
Running Sum
H Residual (TS2 - TS1) $wo datasets needed but 1 datasets sele
^ Cumulative Difference (two datasets needed but 1 datasets se
'. Scatter [TS2 vs TS1) ftwo datasets needed but 1 datasets self

D Multiple WQ Plots
All [ | None [
Cancel

Generate


112.    After "Timeseries" is selected, click "Generate" to produce the graph below. The discharge has
    been previously defined as cfs (ft3/s) even though the y-axis does not display the units. This figure
    can be modified in the same manner as hourly graphs. NOTE: One curve (HOURLY 04030101 RO) is
    plotted with the left y-axis (maximum of 1000) and the other curve (DAILY 04030101 FLOW) is
    plotted with the right y-axis (maximum of 500), making it appear that the daily average flows are
    higher than the hourly flows. To compare the curves, ensure that ranges associated with the two
    y-axes are the same.
                                                  53

-------
    1.0DO

     900
     700
                                               1996
                                            04030101 3tRCH7
113.    By making y-axes consistent, changing curve colors, cleaning up labels, and interrogating the
    period June 1-30, 1995, the comparison between hourly and daily flows is illustrated below:
•1 Timeseri
File Edit
1
Hourly Discharge
=s Graph
View
100
90
80
70
60
50
40
30
20
10
0
ajjaj-^-
Analysis Coordinates Help

	 HOURLY 04030101 RO
	 DAILY 04030101 FLOW





r\i
r^.^^.^ -— ~°~c^^^ £u


1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30
June 1995
Time (Years)
100
90
80
70
60
50
40
30
20
10
0
Dally Average Discharge (ft*3/s)
A similar example could be constructed for microbial densities, but density fluctuations would be on a
log, not linear, scale. If individual storm events, which could vary hourly, impact exposure levels to
sensitive receptors at recreational areas, then producing daily average values could miss critical peak
exposure events, hence, the reason for using hourly simulations and capturing hourly results.

View Microbial Simulations: Time Series of Microbial Densities at Multiple Locations

Viewing a time series for microbial densities uses the same procedure as that used for discharges.

114.    From the BASINS user interface, choose "Analysis", then "Graph" from the menu.
                                               54

-------
•
 i, ^ Analysis   Layer   View   Bookmarks   Plug-ins
      Data Tree
      DFLOW
      Climate Assessment Tool
      List
      Graph
      Watershed Characterization Reports
      Synoptic
      Seasonal Attributes
      Reclassify Land Use

      Projection Parameters
      STORE! Homepage
      Standard Industrial Classification Codes
      Water Quality Criteria 304a
      Watershed Characterization System (WCS)
      USGS Surface Water Statistics (SWSTAT)
115.    Under the Constituent section, choose "DQAL" to provides microbial densities in Counts/L at
     various reaches. Under Matching Data, choose the reaches corresponding to RCH3 and RCH7, and
     note they are in hourly outputs and will appear under Selected Data. Ensure that "Hour" is chosen
     under 'Change Time Step To', then click 'Ok'.
   File   Attributes   Select   Help
  Select tribute Values to Filter Available Data
  Scenario
  04030101
  040301010406
  COMPUTED
  NLDAS
  OBSERVED
  rvr i™.nr-
  Matching Data (7 of 1429)
  04030101
  04030101
  04030101
  04030101
                    RCH5
                    RCH1
                    RCH4
                    RCH6
  Selected Data (2 of 1429)
  04030101
  04030101
  Dates to Include
                    RCH3
                    RCH7
                                        » Constituent
DQAL
DQAL
DQAL
DQAL
DQAL
DQAL
Start 1990/01/01
End  2000/12/31   2000/12/31      2000/12/31
  Apply month/day range to each year
|3 Change Time Step To:  1
                                                            "Time Unit
                                                            Hour
                                                            Day
                                                            Month
Hour
Hour
Hour
Hour
Hour
Hour
                                                                Ok
                                                                          Cancel
                                                          55

-------
The definitions of the
Param eter
Mic robe-DDGAL-EI C C EG
Microbe-DC SAL-GEN
MicrDbe-CDaAL-HYCRCL
Micrcbe-CC^AL-CXIC
Micrcbe-CC^AL-FHCTCL
Microbe-DDSAL-TCT
Micrcbe-CCaAL-VCLAT
Micrcbe-DSAL
Microbe-ICaAL
Microbe-RDaAL
Microbe- P. ODCtAL
Micrcbe-RRaAL
Microbe-TiaAL
Microbe-TRCaAL
microbial parameti
Units
counts/time interval
counts/time interval
counts/time interval
counts/time interval
counts/time interval
counts/time interval
counts/time interval
counts/L
counts/time interval
counts
counts
count:
counts
counts
=rs are:
HSPF-12.2Manual
(https//water.epa.gov/sc it&c h/datait/mod els/basi ns/bsnsdocs. cfm|
amount cf parent material decayed by process BIGCEG
amount of pa rent material decayed by process GEN
amcLnt of parent material decayed by prccess HYCRCL
amcunt cf parent material decayed by process CXIC
amount of parent material decayed by process PHOTOL
amount of parent material decayed by process TCT
amount of parent material decayed by process K''J'OLAT
concentration cf "dissolved1 microbe (i.e., microbe in water)
in put of microbe in water column from upstream reach
total storage of microbe in water column
rricrcbial cLtflcw qL = r:i:-.-
micrcbial storage in reach
total inflow of microbes
tota 1 outfl ow of m i crobes
 Time interval'is hourly in this case.
116.    A graph selection window will appear. Choose "Timeseries".
(41 Choose Graphs to Create

ffi

=i | G=D

fJ3—


[7J Timeseries
n Row/Duration
[n Frequency
^ Running Sum
Residual :TS2 - TS1; (two datasets needed but 1 datasets sek
Cumulative Difference (wo datasets needed but 1 datasets se
Scatter ITS2 vs TS1) ftwo dalasets needed but 1 datasets self

|T] Multiple WQ Plots

All



None


Cancel

Generate



117.    With "Timeseries" selected, click "Generate". The following graph is produced with microbial

    densities of Counts/L
 File Edit View Anah
    8.000





    7,000





    6,000





   J 5,000

   o
   0

   o 4,000





   o 3,000
                                             i
                                                        _0_
                                                  56

-------
118.     By changing curve colors, cleaning up labels, changing the range on the y-axis, and converting it
    to log scale, microbial densities at reaches 3 and 7 can be compared. NOTE: These are uncalibrated
    simulations.
                                  I1;! liilil:" :
View Tabular Results Associated with Hourly Discharge and Microbial Density Simulations
119.    To view tabular results of the time series for hourly discharges and corresponding microbial
    densities, using reach 7 (RCH7) as an example, choose "Analysis", then "List" from the BASINS menu.
      File ii '• Wat>;ri-hrd L.^iin»jti>:>n   'Models  '"Compute   ''Launch
• ILJ •
s » I! La a a * 3
• New Open Punt Settings i Add Remove Cleat Svmbnlogy
*p
• Pan In
Legend
f~ + * >Cl /
Out Extent Previous Layer

Layers Toolbox
BBIL3 Point Source* and Withdrawals
| ED Permit Co rripliance System
B 0 Q Observed Data Stations
: - -.
i New -1*
^ ^
1
1
0' * 4

a CT Weather Station Sites 2006 ^ ' ^l
ED Bacteria
•$> • m
B 0 £^ Hydrology
B0 Reach File, V1
m D NAW3A Study Area Unit Boundaries ^ D g
mn A«
,-,untir,,3l!riirai:irr,,-iaii,?;
BI3 Cataloging Unit Boundaries
*
*D B
B D & Transportation
                                       tfdl Analysis Layer View  Bookmarks  Plug-ir
                                         Data Tree
                                         DFLOW
                                         Climate Assessment Tool
                                         List
                                         Graph
                                         Watershed Characterization Reports
                                         Synoptic
                                         Seasonal Attributes
                                         Redassify Land Use
                                         Projection Parameters
                                         STORET Homepage
                                         Standard Industrial Classification Codes
                                         Water Quality Criteria 3Q4a
                                         Watershed Characterization System (WC5)
                                         USGS Surface Water Statistics (5W5TAT)
120.     Under the Constituent section, scroll down to "RO", and select RCH7 with the "Hour" Time Unit.
    The results will appear under the "Select Data To Graph" section. Under the Constituent section,
    scroll down to "DQAL", and select RCH7 with the "Hour" Time Unit. Results will appear under the
    "Select Data To Graph" section. Click 'Ok'.
 Select fttnbuteVabes to
 Scenario
 04030101
 010301010406
 COMPUTED
 NLDAS
 OBSERVED
 Selected Oala (2 of 14231
 04030101
 04D30101
   1990/01/01
RCH7
RCH7
           •"!,£ 1
 End 2000/12/31  2000/12/31
 _J /coV month/day range to each year
 D Change Time aepTo' 1  |Da7
                                                      57

-------
121.   The following appears. Note that the first column (for time) reports in hourly increments, the
    second column presents discharges in ft3/s, and the third column presents corresponding microbial
    densities in Cells/L (or Counts/L).
If Timeseries List
File Edit Viev
History 1
Constituent
Id
Mir
Max
Mean
1990/01/01 01:00
1990)01/01 02:00
1990)01)01 03:00
1990/01)01 04:00
1990/01/01 05:00
1990/01/01 06:00
1990/01/01 07:00
1990)01/01 08:00
1990)01/01 09:00
1990/01/01 10:00
1990)01/01 11:00
1990/01/01 12:00
1990)01/01 13:00
1990)01/01 14:00
1990/01/01 15:00
1990/01/01 16:00
1990)01/01 17:00
1990/01/01 18:00
1990/01/01 19:00
1990)01/01 20:00
1990/01)01 21:00
1990(01)01 22:00
1990)01/01 23:00
1990)01)01 24:00
1990)01/0201:00
1990)01/0202:00
1990/01/0203:00
1990)01)0204:00
1990)01)0205:00
1990)01/0206:00
1990)01/0207:00
1990)01)0208:00
1990/01/0209:00
1990)01/02 10:00
1990)01)0211:00
1990/01/02 12:00
loarwviTO i^-rv.
/ Analysis Help
from 040301 01 Q406.wdm
RO
US
0.052202
342.97
13.793
123.35
117.54
104.31
91.34
79.274
63.393
53.788
50.404
43.151
36.919
31.599
27.074
23.234
19.982
17.234
14.92
12.976
11.342
9.9674
8.8091
7.8335
7.0116
6.3176
5.7301
5.2313
4.3065
4.4431
4.1311
3.9458
3.8904
3.835
3.7781
3.7195
3.6597
3.5999
3.5401
•<=» n -^—


from 040301 01 Q406.wdm [±_
DQAL L
M8
0.026511
6,392.2
33.035
93.913
96.597
93.74
90.82
87.995
35.303
82.748
80.302
77.944
75.653
73.422
71.226
69.083
67.029
65.049
53.129
61.287
59.498
57.769
56. 104
54.501
52.963
51.482
50.043
43.642
47.291
45.982
44.72
43.513
42.368
41.248
40.161
39.098
38.032
36.956
35.91
•if ai ;
                                             58

-------
DISCLAIMER

The findings and conclusions in this presentation have not been formally disseminated by the EPA and
should not be construed as representing any Agency determination or policy.
REFERENCES

Kim, K., G. Whelan, M. Molina, ST. Purucker, Y. Pachepsky, A. Guber, M. Cyterski, D. Franklin. 2015.
Rainfall-induced release of microbes from manure: model development, parameter estimation, and
uncertainty evaluation on small plots. J Water Health (Submitted).

Kim, K., K. Price, G. Whelan, M. Galvin, K. Wolfe, P. Duda, M. Gray, Y. Pachepsky. 2014. Using Remote
Sensing and Radar Meteorological Data to Support Watershed Assessments Comprising IBM. In: Ames,
D.P., Quinn, N.W.T., Rizzoli, A.E. (Eds.), Proceedings of the 7th International Congress on Environmental
Modelling and Software, June 15-19, San Diego, California, USA. ISBN: 978-88-9035-744-2.

Martinez, G., Pachepsky, Y.A., Sheldon, D.R., Whelan, G., Zepp,  R., Molina, M., Panhorst, K. 2013 Using
the Q10 model to simulate E. coli survival in cowpats on grazing lands. Environ. Int. 54, 1-10.

WDNR (Wisconsin Department of Natural Resources). 2015. Deer abundance and densities in Wisconsin
deer management units,  (Last accessed  23.09.15).

Whelan, G., K. Kim, K. Wolfe, R. Parmar, M. Galvin. 2015a. Quantitative Microbial Risk Assessment
Tutorial: Installation of Software for Watershed Modeling in Support of QMRA. EPA/600/B-15/276. U.S.
Environmental Protection Agency, National Exposure Research  Laboratory, Athens,  GA.

Whelan, G., K. Kim, K. Wolfe, R. Parmar, M. Galvin, M. Molina, R. Zepp. 2015b. Navigate the SDMPB and
Identify an 8-Digit HUC of Interest.  EPA/600/B-15/273. U.S. Environmental Protection Agency, Athens,
GA.

Whelan, G., R. Parmar, K. Wolfe, M. Galvin, P. Duda, M. Gray. 2015c. Quantitative Microbial Risk
Assessment Tutorial-SDMProjectBuilder: Import Local Data Files to Identify and Modify Contamination
Sources and Input Parameters. EPA/600/B-15/316. U.S. Environmental Protection Agency, Athens, GA.
                                              59

-------
                                             APPENDIX A
                                   SDMPB-generated HSPF UCI File

1.  Go the HSPF folder and open the UCI file with a text editor such as Notepad, WordPad, or TextPad.
    TextPad was used in Appendix A.
        TESTA > HSPF
  File Edrt View  Jools Help
                               a
      •  SDMPB
        bin
        etc
      '  TESTA
        j, HSPF
         HSPF-PEST
       f i hud2
         LocalData
        i met
         NHDPIus
         NLCD
H  Q M0301010406.ptf
   [j 040301010406.Kh
   DO
   gn
                         -1 j Computer
2.  Looking at the UCI, we see the "MONTH-DATA" blocks for Microbes, and that the HSPF "PERLND"
    (i.e., pervious land) sections SEDMNT, PSTEMP, and PQUAL have been activated.
  TextPad - C:\UsersVgwhelan\iemTechnologies\SDMPB\TESTA\HSPF\040301010406.uci
File Edit Search View Tools Macros C
: 0 G* Ei & ffl Ei H i Hi ffl -1 .':-
: F nd incrementally d ft D Match case -
X
0.












































ir
04030iol04b6.ud |
MONTH-DATA <^ 1
MONTH-DATA 1
*** atmospheric dry deposi t ion
<
55640 55640 55640 55640 55640
END MOUTH-DATA 4
MONTH-DATA 5
*** atmospheric dry deposition
*** used to input loads from c
<
55640 55640 55640 55640 55640
END MONTH-DATA 5
MONTH-DATA 6
*** atmospheric dry deposition
*** used to input loads from c
<
00000
END MONTH-DATA 6
MONTH-DATA ?
*** atmospheric dry deposition
*** used to input loads from c
<
74186 74186 74186 74186 74186
END MONTH-DATA 7
EHD MONTH-DATA
PESLND
ACTIVITY
***  Active
*** K - K ATHP SNOW PWAT SED
101 208 1 1 1 0
END ACTIVITY
\< 	
Search Results
>nfigure Windo



f lunes
yal->!val-J<
74186 74186


f luxes
yal-xval-><
18547 18547


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attle in str
37093 37093


fluxos
attle in str
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55640 55640


fluxes
attle in str
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55640 55640


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                                                  60

-------
3.  HSPF RCHRES sections HTRCH and GQUAL have been activated.
|P TextPad - C:\Users\gwhelan\iemTechnoIogies\SDMPB\TESTA\HSPF\040301010406,uci
   File   Edit   Search  View  Tools  Macros  Configure  Window   Help
  d & y   i S a H  l % H l £?. .e!« n a IT   ® ^
 • Find incrementally  fl  tf    Match case _
I  (f Q? ft   • II*
0403 01 010406.uci j • I
RCHRES 4^™
ACTIVITY]
*** RCHRES Active sections
*** x - x HYFG ADFG CNFG HTFG SDFG GQFG OXFG HDFG PKFG PHFG
171101010000
END ACTIVITY
PRINT-INFO
*** RCHRES Printout level flags
*** x - x HYDR ADCA CONS HEAT SED GQI OXRX NUTR PLNK PHCB
174444444444
END PR I NT- INFO
BINARY-INFO
*** RCHKES Binary Output level flags
*** x - x HYDR ADCA CONS HEAT SED GQL OXRX NUTR PLNK PHCB
174444444444
END BINARY- INFO
GEN- INFO
*** Name Nexits Unit Systems Printer
*** RCHRES t -series Engl Metr
*** x - x in out
1 Killsnake River 1 1 1 91 0
2 STREAM 2 1 1 1 91 0
3 STREAM 3 1 1 1 91 0
4 STREAM 4 1 1 1 91 0
5 STREAM 5 1 1 1 91 0
6 STREAM 6 1 1 1 91 0
7 Killsnake River 1 1 1 91 0
END GEN- INFO
HYDR-PARM1
*** Flags for HYDR section
***RC HRES VC Al A 2 A3 ODFVFG for each *** ODGTFG for each
*** x - x FG FG FG FG possible exit *** possible exit
1 70111 40000 00000
END HYDR-PARM1
HYDR-PARM2
*** RCHRES FTBW FTBU LEN DELTH STCOR KS
*** x - x (miles) (ft) (ft)
1 01 3.37 39 3.2 0.5
2 02 2.62 43 3.2 0.5
3 03 3.2 39 3.2 0.5
4 04 3.48 69 3.2 0.5
5 05 1.1 39 3.2 0.5
6 06 1.95 30 3.2 0.5
7 07 7.04 49 3.2 0.5
END HYDR-PARM2
HYDR-INIT
*** Initial conditions for HYDR section



PIVL PYR
1 9



PIVL PYR
1 9



LKFG

0 92 0
0 92 0
0 92 0
0 92 0
0 92 0
0 92 0
0 92 0



FUNCT for
possible
111


DB50
(in)
0.01
0.01
0.01
0.01
0.01
0.01
0.01




























each
exit
1 1














***RC HRES VOL CAT Initial value of COLIHD initial value of OUTDGT
*** x - x ac-ft for each possible exit for each
1 6 4.24.54.54.54.2 2.1
2 3 4.24.54.54.54.2 2.1
possible exit.
1.2 0.5 1.2
1.2 0.5 1.2
ft3
1.8
1.8
                                                     61

-------
4.  The microbes are simulated as general quality constituents in the GQUAL section.
g1 TextPad - C:\Users\gwKeian\iemTechnoIogies\SDMPB\TESTA\HSPF\040301010406.uci
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*** RCHRES NGQL TPFG PHFG ROFG
*** x - x
171122
END GQ-GEHDATA
GQ-AD-FLAGS
m ri fl^ IT &*& 2\





CDFG SDFG PYFG LAT
deg
2220


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*** Atmospheric Deposition Flags
*** RCHRES GQUAL 1 GQUAL 2 GQUAL 3
*** x - x   
1 200000
2 600000
3 500000
4 300000
5 100000
6 400000
7 700000
END GQ-AD-FLAGS
GQ-QALDATA
*** RCHRES GQID
*** x - x
1 7Microbe
END GQ-QALDATA
GQ-QALFG
*** RCHRES HDRL OK ID PHOT VOLT
*** x - x
170000
END GQ-QALFG
J<
GQUAL 4 GQUAL 5 GQUAL 6
  
00 00 00
00 00 00
00 00 00
00 00 00
00 00 00
00 00 00
00 00 00


DQAL CONCID
concid
100 OR/L


BIOD GEN SDAS

010


GQUAL 7

0 0
0 0
0 0
0 0
0 0
0 0
0 0


CONV QTYID

0.0353 #ORG








Search Results
                                                62

-------
5.  The EXT TARGETS block specifies which time series are output. Instream hourly time series for flow
    (RO) in ft3/s and microbial densities (DQAL) in Cells/L are published for each reach (RCHRES).
|f TextPad - C:\U5ers\gwhelan\iemTechnoIogies\SDMPB\TESTA\HSPF\040301010406.uci
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  G a; y  i &  a B  I  % H ! ii'. .e         s  IT  ^ ^
 | Find incrementally  JJ  ft [  Match case _
             f i

< Name > x
PERLHD 101
PERLHD 101
PERLHD 102
PERLHD 102
PERIHD 103
PERLHD 103
PERLHD 104
PERLHD 104
PERLHD 105
PERLHD 105
PERLHD 106
PERLHD 106
PERLHD 107
PERLHD 107
PERLHD 108
PERLHD 108
IMPLHD 102
IMPLHD 102
PERLHD 201
PERLHD 201
PERLHD 202
PERLHD 202
PERLHD 204
PERLHD 204
PERLHD 206
PERLHD 206
PERLHD 207
PERLHD 207
PERLHD 208
PERLHD 208
PERLHD 205
PERLHD 205
IMPLHD 202
IMPLHD 202
RCHRES 5
RCHRES 5
RCHRES 1
RCHRES 1
RCHRES 4
RCHRES 4
RCHRES 6
RCHRES 6
RCHRES 3
RCHRES 3
RCHRES 2
RCHRES 2
RCHRES 7
RCHRES 7
RCHRES 7
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GQUAL
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PERO
POQC
PERO
POQC
PERO
POQC
PERO
POQC
PERO
POQC
PERO
POQC
PERO
POQC
PERO
POQC
SURO
SOQC
PERO
POQC
PERO
POQC
PERO
POQC
PERO
POQC
PERO
POQC
PERO
POQC
PERO
POQC
SURO
SOQC
RO
DQAL
RO
DQAL
RO
DQAL
RO
DQAL
RO
DQAL
RO
DQAL
FLOW
RO
DQAL
1 EHGL
1 EHGL
1 EHGL
1 EHGL
1 EHGL
1 EHGL
1 EHGL
1 EHGL
1 EHGL
1 EHGL
1 EHGL
1 EHGL
1 EHGL
1 EHGL
1 EHGL
1 EHGL
1 EHGL
1 EHGL
1 EHGL
1 EHGL
1 EHGL
1 EHGL
1 ENGL
1 EHGL
1 ENGL
1 ENGL
1 EHGL
1 EHGL
1 ENGL
1 EHGL
1 ENGL
1 EHGL
1 EHGL
1 EHGL
1 EHGL
1 EHGL
1 EHGL
1 EHGL
1 EHGL
1 EHGL
1 EHGL
1 EHGL
1 EHGL
1 EHGL
1 EHGL
1 EHGL
1 EHGL
1 EHGL
1 EHGL


Aggr
strg
AGGR
AGGR
AGGR
AGGR
AGGR
AGGR
AGGR
AGGR
AGGR
AGGR
AGGR
AGGR
AGGR
AGGR
AGGR
AGGR
AGGR
AGGR
AGGR
AGGR
AGGR
AGGR
AGGR
AGGR
AGGR
AGGR
AGGR
AGGR
AGGR
AGGR
AGGR
AGGR
AGGR
AGGR
AGGR
AGGR
AGGR
AGGR
AGGR
AGGR
AGGR
AGGR
AGGR
AGGR
AGGR
AGGR
AGGR
AGGR
AGGR


Amd ***
strg***
REPL
REPL
REPL
REPL
REPL
REPL
REPL
REPL
REPL
REPL
REPL
REPL
REPL
REPL
REPL
REPL
REPL
REPL
REPL
REPL
REPL
REPL
REPL
REPL
REPL
REPL
REPL
REPL
REPL
REPL
REPL
REPL
REPL
REPL
REPL
REPL
REPL
REPL
REPL
REPL
REPL
REPL
REPL
REPL
REPL
REPL
REPL
REPL
REPL
END EXT TARGETS
63

-------
                                         APPENDIX B
                          Typical Map Layers Generated by the SDMPB

This appendix briefly reviews typical map layers captured by the SDMPB. To view them, save the
simulation prior to closing the "Finish Building Project Window". Regardless of whether SDMPB results
are saved, the BASINS MapWindow project (*.mwprj) and HSPF UCI (*.uci) files will be created and
saved for the watershed analysis. The various map layers can be viewed in BASINS. In this alpha version,
it is not recommended to save the results since saving multiple use cases may result in some dotSpatial
instability in later runs. This issue will be investigated.

Typical map layers generated by the SDMPB are as follows:
1.  When finished running the SDMPB, you will see a message similar to the one below.
 Frames SDM
   Finished Building Project
   C:\Users\gwhelan\iemTechnologies\SDMPB\TESTA\TESTA.mwprj
2.  Prior to making a choice, go to the SDMPB menu bar, choose "File", then "Save".
              Project&mld«f  Extensions
3.  After saving the file, return to the message window and choose "Ok".
 Frames SDM
   Finished Building Project
   C:\Users\gwhelan\iemTechnologies\SDMPB\TESTA\TESTA.mwprj|
                   Ok     | Open Folder |  [ Open in BASINS
4.  The SDMPB will automatically close. To inspect results of the data downloads, execute the
    SDMProjectBuilder (SDMPB) by clicking on the shortcut icon displayed on the computer screen.
                                             64

-------
5.  Choose "File", then "Open".
           Ptoj«ctfk»kJ*f  Extensions
                  eM e * » o
6.  Select by double-clicking the *.dspx file in the working folder; here, it would be TESTA.dspx:
          . SDMPB
            bin
         > i- etc
_ statsgo.shx
2 statsgoc.dbf
         •• J, TESTA
             HSPF
10/6/2015 4:20 PM   SHXFile
12/12/200312:50...  DBF File
12/12/2003 12:50 ...  DBF File
10/6/2015 4:23 PM   DSPX File
10/6/2015 4:23 PM   MWPRJ File
 1KB
 64KB
168KB
159KB
 25KB
7.  The following screen will appear:
8.  A summary of the Map Layers is documented in the Map Layer listing on the left side of the screen
    below. By checking certain map layers, we can zoom to the HUC-12 of interest.
  - •' (HI ''•••-. f
    \ .
  --._ NU» am
  r O 5... BoxdiiKt Ic
    D
                                                    65

-------
    The map displays only checked Map Layers, arranged in the following order:
        •   NHDPIus Flowline (nhdflowline.shp) Role: Hydrograhy (two of them)
        •   NHDPIus Waterbody (nhdwaterbody) (nhdwaterbody.shp) Role: Hydrography
        •   NHDPIus Catchment Polygons (catchment) (catchment.shp) role: SubBasin)

Layers can be interrogated individually by turning various Map Layers "on" and "off" and manipulating
color and opaqueness. For example, the NHDPIus elevations (in cm) for the area can be viewed below
(color gradation represents elevation gradation):
   -. •• NHDPIui CMchnwn P^jom lc«d»«nl| (e*Clmer* thp) R(4
    D
   - ' NLCD J001 Land Cov* INICD3001 LandCtwB] RoteL»>4J=e
    n«
            ..
      S24J75-38JS1
      38.331.31.787
   - ' NKDPIui Catetmw* Pttffxa kMchnom) (cMdvwr<>)«| Rote Si
    •
   --\ : SWe Sol 1(3*31 si*:go] (Haligo -J*] Ro4t 5o<

   -. ' SWe emmdaon IcaeJI «] <>t*eJ RoteSWe
    D
   •i HAWOA Siu$ Ajea Unt BouxJn! !coe3t nswq*l (nawwitv]

   - . LandUielrOe.lcweJlUcia.llliind.iiC'l
The NLCD Land cover which identifies impervious and pervious areas, and cropland, pastureland,
forests, etc. can be presented as seen below. Note the watershed's opacity is less than unity:
    CH
    Qs
    B
    m
    y:
    MHPfVn Uthnrf P
    n



  t£( EPARW,B»«JWB,

  E El £a»9Ctt lU-tl "II lu

  - . CM* N«*a <«»» tr
                                                  66

-------
where the meanings of the 2006 NLCD codes are:
NLCD Land Cover Classification Legend
  • 11 Open Water
  H]12 Perennial Ice/ Snow
I    |21 Developed, Open Space
  	] 22 Developed, Low Intensity
  • 23 Developed, Medium Intensity
  124 Developed, High Intensity
    ] 31 Barren Land (Rock/Sand/Clay)
  _] 41 Deciduous Forest
  B 42 Evergreen Forest
  H] 43 Mixed Forest
  • 51 Dwarf Scrub*
I    152 Shrub/Scrub
  HI 71 Grassland/Herbaceous
I    172 Sedge/Herbaceous*
i     73 Lichens*
     74 Moss*
I    181 Pasture/Hay
  182 Cultivated Crops
|    190 Woody Wetlands
I    195 Emergent Herbaceous Wetlands
•Alaska only
The 12-digit HUC has been subdivided into much smaller subwatersheds which were automatically
determined based on the minimum catchment size and flowline length.
 r* sow PIQVKI »*»•<
   -  ! $4tf« 8o*rf«nei l«t*31 U) |U .rcl flcfc Slat*
     D
   -  __ MAWOAStu* AmaUr* SotrOtKti |«m?1
     B
   -  UndUtelnln
                                                    67

-------
                                      APPENDIX C
                        NLDAS Stations Recorded in the HSPF UCI File

Looking at the UCI, we see two sets of pervious and impervious land types (PERLND and IMPLND,
respectively) corresponding to the two NLDAS locations in use.

  [RUN

  GLOBAL
    UCI Created by WinHSPF  for 040301010406
    START        1990/01/01  00:00  EHD     2000/12/31  24:CO
    RUN INTERP OUTPT  LEVELS    1     0
    RESUME      0 RUN      1                              UNITS     1
  END GLOBAL
FILES
 **- + < 	 F]
- T TJI TvTATJTC1
.JjH WAMU
MESSU 24 040301010406. ech
91 040301010406. out
WDM1 25 04030 10 104 06. wdm
WDM2 26 met. wdm
BINO 92 040301010406. hbn
END FILES
OPN SEQUENCE
INGRP
PERLND
PERLND
PERLND
PERLND
PERLND
PERLND
PERLND
PERLND
IMPLND
PERLND
PERLND
PERLND
PERLND
PERLND
PERLND
PERLND
LMPLND
RCHRES
RCHRES
RCHRES
RCHRES
RCHRES
RCHRES
RCHRES
END INGRF
END OPN SEQUENCE


INDELT 01:00
101 "•
102
103
104
105
106
107
108
102 ..
2:i "•
202
204
206
207
208
205
202 —


-o




-e


5
1
4
£
3
2
1


                                          68

-------
The external sources (EXT SOURCES) block assigns MET data to each subwatershed (subbasin). Since we
only pull precipitation data from NLDAS, the other met constituents are from a BASINS station that has
the full suite of meteorological data (Green Bay).
 I
 EXT  SOURCES
 <-Voluine-> 
     x  x tern srbrc[<-
-Mult-->Tran. <-Target
factor->£tr   x
                     <-Grp>  <-Memfoer->
                   :x          x x
•*** Met Sec
WDM2 21
WDM2 6
WDM2 3
WDM2 14
WDM2 15
WDM2 17
WDM2 18
+ *J' Met Se<
WDM2 31
WDM2 6
WDM2 3
WDM2 14
WBM2 15
WDM2 17
WDM2 18
1 X294Y152
PREC
PEVT
A7EM
HIND
SOLR
DEWP
CLOU
I X293Y152
PREC
PEVT
AT EM
WIND
SOLR
DEWP
CLOU
*** Met Se£ X294Y152
WDM2 21 PREC
WDM2 6
WDM2 3
WDM2 14
WDM2 15
WCM2 17
WDM2 18
PEVT
A3 EM
WIND
SOLR
B2KF
CLOU
*** Met 3eg; X293Y152
WDM2 31 PREC
WDM2 6
WDM2 3
WDM2 14
WDM2 15
WDM2 17
WDM2 18
P2VT
ATEM
rAlX2
SOLR
DEWP
CLOU

ENGLZERO
ENGL
ENGL
ENGL
ENGL
ENGL
ENGL

ENGLZERO
ENGL
ENGL
ENGL
ENGL
ENGL
ENGL
ENGLZERO
ENGL
ENGL
ENGL
ENGL
ENGL
ENGL
ENGLZERO
ENGL
ENGL
ENGL
ZNEL
ENGL
ENGL
                                          SAME PERLND 101  108  EXTNL  PREC
SAME PERLND  101 108 EXTNL
SAME PERLND  101 108 EXTNL
SAME PERLND  101 108
                                                                      PETIH?
                                                                      GA.MF
                                          SAME PERLND 101  108  EXTNL  SOLRAD
                                          SAME PERLND 101  108
                                          SAME PERLND 101  108  EXTNL  CLOUD
                                          SAME PERLND 201  208  ________
                                          SAME PERLND 201  206  EX.TJJL__PE£INP
                                          SAME PERLND 201  208  EXTNL
                                          SAME PERLND 201  208  EXTNL  WIHMOV
                                          SAME PERLND 201  206  EXTNL__HCLRAD
                                          SAME PERLND 201  208
                                          SAME PERLND 201 208  EXTNL  CLO'JD
                                          SAME
                                          SAME
                                          SAME
                                          SAME
                                          SAME
                                          SAME
                                          SAME

                                          SAME
                                          SAME
                                          SAME
                                          SAME
                                          SAME
                                          SAME
                                          SAME
     IMPLND
     IMPLND
     IMPLND
     IMPLND
     IMPLND
     IMPLND
     IMPLND

     IMPLND
     IMPLND
     IMPLND
     IMPLND
     IMPLND
     IMPLND
     IMPLND
                     102
                     102
                     102
                     102
                     102
                     102
                     102

                     202
                     202
                     202
                     202
                     202
                     202
                     202
EXTNLDTKP
EXTNL  SOLRAD
EXTNL
EXTNL
DTKPG
CLO'JD
                                           69

-------