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Section 319
NMPOINT SOURCE PROGRAM SUCCESS SIURY
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Local Conservation Group Leads Efforts^) Neutralize Acid Mine Drainage
and Restore Fishery
Waterbodies Improved Acid	W*D) from abandoned coal mines
impaired the aquatic life designated use in the Johnson
Run watershed. As a result, the Pennsylvania Department of Environmental Protection
(DEP) placed the main branch of Johnson Run and more than 17 miles of contributing
tributaries on the state's 2004 Clean Water Act (CWA) section 303(d) list of impaired waters
because of low pH and elevated manganese levels. Treating AMD and surface runoff from
mining waste piles significantly improved water quality in much of the watershed and
restored the aquatic life designated use. Consequently, DEP intends to remove eleven
segments within the Johnson Run watershed (the main branch and 14.9 miles of tributaries)
from the 2012 CWA section 303(d) list of impaired waters.
Problem
Johnson Run is a headwater stream in the Ohio
River watershed (Figure 1). It originates in northern
Elk County in northwestern Pennsylvania and flows
into the East Branch of the Clarion River down-
stream of East Branch Dam This area has been
subject to strip mining and deep mining for coai
since the late 1800s, although there are currently no
active mines in the watershed. Discharges from old
deep mines are the most significant source of AMD
to Johnson Run, followed by runoff from unre-
claimed surface mining activities Discharges from
these sources have caused pH and metal levels in
the waterbody to exceed water quality standards.
As a result, the Pennsylvania DEP placed numerous
segments within the Johnson Run watershed on
the state's 2004 CWA section 303(d) list of impaired
waters because of low pH and high ievels of
manganese. To meet the state's standards, the pH
must stay above 6.0 standard units and manganese
concentrations (total 30-day mean) may not exceed
1.00 milligrams per liter (mg/L).
Project Highlights
In the late 1990s, a local watershed group formed
to improve water quality in East Branch Lake and
its surrounding waters, including Johnson Run. The
group, known as the Elk County Fishermen, imple-
mented a number of projects to clean up AMD,
Figure 1. Johnson Run is in the Ohio River watershed.
concentrating their efforts on East Branch Lake
tributaries and Johnson Run. In 2002 an environ-
mental consulting firm (Hedin Environmental) devel-
oped a restoration plan for East Branch Lake and
Johnson Run. The plan outlined the steps necessary
to restore the impaired waterbodies and bring back
healthy fish populations.
In 2002 project partners installed a passive treat-
ment system on a Johnson Run tributary to treat
flow from an abandoned deep mine that generates
the watershed's primary source of AMD. The treat-
ment system, which consists of vertical flow ponds,
limestone-lined channels, flush ponds, holding
Potomac
Pennsylvania's Six Major River Basins
"Sow""
Johnson Run

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Figure 2. Restoration efforts have improved water quality in
Johnson Run (looking downstream, above the confluence with
East Branch Clarion River).
Figure 3. Pennsylvania DEP staff members conduct biological
sampling to measure fish populations in summer 2010.
tanks and wetlands, collects and treats two sepa-
rate discharges from the abandoned deep mine.
In 2003 another method of treatment was imple-
mented to treat surface sources of AMD. Runoff
from pyritic spoil piles (mine waste with high levels
of pyrite, a rock composed of iron and suifur) and
surface mines contributed to water quality degra-
dation in Johnson Run. To address these surface
sources, project partners mixed alkaline residuals
(limestone and paper fines) from the Weyerhauser
paper mill's wastewater treatment plant with the
pyritic spoil piles to neutralize the pH. The partners
then applied a thick layer of residuals and seeds to
the surface of the piles. The layer supported the
growth of dense vegetation, which has helped to
prevent pollution by reducing oxygen and water
infiltration, both precursors to acid formation.
Results
Adding the upstream passive treatment system
on the abandoned deep mine and treating the
surface runoff from pyritic spoil piles significantly
improved water quality in the watershed (Figure 2).
Data collected at the mouth of Johnson Run show
a rise in pH, from an average of 5.2 standard units
in 1998 to 7.3 standard units in 2007. In addition,
the data show that average 30-day manganese
concentration declined to 0.08 mg/L. Both param-
eters now meet water quality standards.
The treatment systems remain in place and contin-
ue to improve water quality. The data from biologi-
cal monitoring conducted in 2010 (Figure 3) show
that a healthy fish population has been restored and
Johnson Run now supports Its aquatic life desig-
nated use. Based on these water quality improve-
ments, DEP intends to remove 11 segments of
Johnson Run (including the main branch and more
than 14.9 miles of tributaries) from the state's CWA
section 303(d) list of impaired waters in 2012.
Partners and Funding
The Elk County Fishermen and the North Central
Pennsylvania Regional Planning and Development
Commission used $407,000 in Growing Greener and
Watershed Restoration and Partnership Act funds
to build the passive treatment system.
«	U.S. Environmental Protection Agency
$ £^3*	Office of Water
I	g	Washington, DC
\W/
•%,	EPA 841 -F-11 -001N
PR0	February 2011
For additional information contact:
Joe Kelly
Pennsylvania Department of Environmental Protection
717-783-2404
Eli Heferle
Pennsylvania Department of Environmental Protection
814-797-1191

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